assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	1	1346214-1346656	1	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	TTCCTAAAGAAATCGGAAAACTAC	24	0	0	NA	NA	NA	6	6	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|70aa|up_7|NC_017551.1_1336438_1336648_+,NA|64aa|up_2|NC_017551.1_1342589_1342781_+,NA|60aa|down_0|NC_017551.1_1346853_1347033_+	NA|310aa|up_9|NC_017551.1_1334067_1334997_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|289aa|up_8|NC_017551.1_1335305_1336172_-	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|70aa|up_7|NC_017551.1_1336438_1336648_+	NA	NA|236aa|up_6|NC_017551.1_1336982_1337690_+	cd07983, LPLAT_DUF374-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374	NA|620aa|up_5|NC_017551.1_1338022_1339882_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|152aa|up_4|NC_017551.1_1340121_1340577_-	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains	NA|463aa|up_3|NC_017551.1_1340569_1341958_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|64aa|up_2|NC_017551.1_1342589_1342781_+	NA	NA|288aa|up_1|NC_017551.1_1342840_1343704_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|343aa|up_0|NC_017551.1_1343790_1344819_+	cd07381, MPP_CapA, CapA and related proteins, metallophosphatase domain	NA|60aa|down_0|NC_017551.1_1346853_1347033_+	NA	NA|704aa|down_1|NC_017551.1_1347351_1349463_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|388aa|down_2|NC_017551.1_1349464_1350628_+	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|219aa|down_3|NC_017551.1_1351251_1351908_+	sd00045, ANK, ankyrin repeats	NA|151aa|down_4|NC_017551.1_1352385_1352838_+	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins	NA|358aa|down_5|NC_017551.1_1353897_1354971_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|172aa|down_6|NC_017551.1_1355190_1355706_+	pfam08877, MepB, MepB protein	NA|399aa|down_7|NC_017551.1_1355879_1357076_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|124aa|down_8|NC_017551.1_1357082_1357454_+	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|511aa|down_9|NC_017551.1_1357489_1359022_+	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	2	1683300-1683395	2	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	GCTTATGTTTGTCTCGCTCTCTATGGATCGCTC	33	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|82aa|up_0|NC_017551.1_1682647_1682893_+,NA|219aa|down_6|NC_017551.1_1691895_1692552_-,NA|275aa|down_9|NC_017551.1_1694426_1695251_+	NA|92aa|up_9|NC_017551.1_1673318_1673594_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|151aa|up_8|NC_017551.1_1673586_1674039_+	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb)	NA|104aa|up_7|NC_017551.1_1674050_1674362_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|150aa|up_6|NC_017551.1_1674371_1674821_+	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|443aa|up_5|NC_017551.1_1674838_1676167_+	TIGR00665, DnaB, replicative DNA helicase	NA|602aa|up_4|NC_017551.1_1676199_1678005_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|805aa|up_3|NC_017551.1_1679000_1681415_+	COG1480, COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only]	NA|142aa|up_2|NC_017551.1_1681483_1681909_+	pfam02130, UPF0054, Uncharacterized protein family UPF0054	NA|261aa|up_1|NC_017551.1_1681881_1682664_+	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO	NA|82aa|up_0|NC_017551.1_1682647_1682893_+	NA	NA|587aa|down_0|NC_017551.1_1683400_1685161_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|419aa|down_1|NC_017551.1_1685160_1686417_+	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|360aa|down_2|NC_017551.1_1686413_1687493_+	cd14963, NHL_like_5, Uncharacterized NHL-repeat domain in bacterial proteins	NA|479aa|down_3|NC_017551.1_1687770_1689207_-	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins	NA|331aa|down_4|NC_017551.1_1689763_1690756_-	pfam00072, Response_reg, Response regulator receiver domain	NA|378aa|down_5|NC_017551.1_1690755_1691889_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|219aa|down_6|NC_017551.1_1691895_1692552_-	NA	NA|112aa|down_7|NC_017551.1_1692619_1692955_-	TIGR00810, secG, protein translocase, SecG subunit	NA|251aa|down_8|NC_017551.1_1693051_1693804_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|275aa|down_9|NC_017551.1_1694426_1695251_+	NA
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	3	2269606-2269696	3	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	TGAACTCAATGCATCACTTCCTA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|209aa|up_8|NC_017551.1_2261221_2261848_+,NA|244aa|up_7|NC_017551.1_2261878_2262610_+,NA|103aa|up_5|NC_017551.1_2263585_2263894_+,NA|100aa|up_0|NC_017551.1_2269228_2269528_+,NA|89aa|down_4|NC_017551.1_2276423_2276690_-	NA|512aa|up_9|NC_017551.1_2259683_2261219_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|209aa|up_8|NC_017551.1_2261221_2261848_+	NA	NA|244aa|up_7|NC_017551.1_2261878_2262610_+	NA	NA|215aa|up_6|NC_017551.1_2262789_2263434_+	PRK01362, PRK01362, fructose-6-phosphate aldolase	NA|103aa|up_5|NC_017551.1_2263585_2263894_+	NA	NA|349aa|up_4|NC_017551.1_2265020_2266067_-	pfam07611, DUF1574, Protein of unknown function (DUF1574)	NA|473aa|up_3|NC_017551.1_2266080_2267499_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|247aa|up_2|NC_017551.1_2267495_2268236_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|302aa|up_1|NC_017551.1_2268335_2269241_+	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|100aa|up_0|NC_017551.1_2269228_2269528_+	NA	NA|358aa|down_0|NC_017551.1_2270046_2271120_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|389aa|down_1|NC_017551.1_2272152_2273319_-	NF033165, lipo_LipL45, lipoprotein LipL45	NA|445aa|down_2|NC_017551.1_2273418_2274753_-	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|437aa|down_3|NC_017551.1_2274993_2276304_+	TIGR04043, hypothetical_protein_WH5701_02349, radical SAM protein, MSMEG_0568 family	NA|89aa|down_4|NC_017551.1_2276423_2276690_-	NA	NA|366aa|down_5|NC_017551.1_2277173_2278271_+	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair]	NA|227aa|down_6|NC_017551.1_2278596_2279277_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|225aa|down_7|NC_017551.1_2279289_2279964_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|222aa|down_8|NC_017551.1_2279979_2280645_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|223aa|down_9|NC_017551.1_2280727_2281396_+	cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	4	2414652-2414751	4	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	TTAGTGGTAGTTCCTACATTTTAG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|113aa|up_8|NC_017551.1_2401510_2401849_+,NA|103aa|up_3|NC_017551.1_2409561_2409870_-,NA|227aa|up_2|NC_017551.1_2410159_2410840_+,NA|145aa|down_7|NC_017551.1_2430508_2430943_+	NA|348aa|up_9|NC_017551.1_2400049_2401093_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|113aa|up_8|NC_017551.1_2401510_2401849_+	NA	NA|915aa|up_7|NC_017551.1_2401922_2404667_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|551aa|up_6|NC_017551.1_2404673_2406326_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|110aa|up_5|NC_017551.1_2406417_2406747_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|939aa|up_4|NC_017551.1_2406730_2409547_-	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|103aa|up_3|NC_017551.1_2409561_2409870_-	NA	NA|227aa|up_2|NC_017551.1_2410159_2410840_+	NA	NA|179aa|up_1|NC_017551.1_2410842_2411379_+	PRK12846, PRK12846, peptide deformylase; Reviewed	NA|1081aa|up_0|NC_017551.1_2411398_2414641_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|361aa|down_0|NC_017551.1_2414792_2415875_-	pfam03929, PepSY_TM, PepSY-associated TM region	NA|501aa|down_1|NC_017551.1_2419758_2421261_-	PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	NA|324aa|down_2|NC_017551.1_2421426_2422398_-	TIGR04327, hypothetical_protein_LlicsVM_10020, outer membrane protein, LA_2444/LA_4059 family	NA|429aa|down_3|NC_017551.1_2424743_2426030_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|634aa|down_4|NC_017551.1_2426239_2428141_-	PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	NA|282aa|down_5|NC_017551.1_2428350_2429196_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|313aa|down_6|NC_017551.1_2429549_2430488_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|145aa|down_7|NC_017551.1_2430508_2430943_+	NA	NA|306aa|down_8|NC_017551.1_2431948_2432866_-	COG3766, COG3766, Predicted membrane protein [Function unknown]	NA|253aa|down_9|NC_017551.1_2432876_2433635_-	PRK05716, PRK05716, methionine aminopeptidase; Validated
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	5	2676135-2676228	5	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	AAAACTCAACACAACGCTTTCCT	23	1	2	2676158-2676205|2676158-2676205	NC_017551.1_2709382-2709335|NC_017551.1_2709453-2709406	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_9|NC_017551.1_2667081_2667633_-,NA|160aa|up_8|NC_017551.1_2667718_2668198_-,NA|135aa|down_7|NC_017551.1_2683708_2684113_-,NA|54aa|down_9|NC_017551.1_2686305_2686467_-	NA|184aa|up_9|NC_017551.1_2667081_2667633_-	NA	NA|160aa|up_8|NC_017551.1_2667718_2668198_-	NA	NA|176aa|up_7|NC_017551.1_2668264_2668792_-	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|114aa|up_6|NC_017551.1_2668836_2669178_-	pfam07600, DUF1564, Protein of unknown function (DUF1564)	NA|430aa|up_5|NC_017551.1_2669529_2670819_-	cd01087, Prolidase, Prolidase	NA|344aa|up_4|NC_017551.1_2670815_2671847_-	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|373aa|up_3|NC_017551.1_2671860_2672979_-	cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2  has multiple roles in intracellular lipid circulation and metabolism	NA|156aa|up_2|NC_017551.1_2673125_2673593_+	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain	NA|417aa|up_1|NC_017551.1_2673589_2674840_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|371aa|up_0|NC_017551.1_2674855_2675968_+	PRK04531, PRK04531, acetylglutamate kinase; Provisional	NA|115aa|down_0|NC_017551.1_2677383_2677728_+	pfam04134, DUF393, Protein of unknown function, DUF393	NA|229aa|down_1|NC_017551.1_2677704_2678391_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|375aa|down_2|NC_017551.1_2678403_2679528_-	TIGR01205, D-alanine--D-alanine_ligase, D-alanine--D-alanine ligase	NA|417aa|down_3|NC_017551.1_2679520_2680771_-	COG1509, KamA, Lysine 2,3-aminomutase [Amino acid transport and metabolism]	NA|225aa|down_4|NC_017551.1_2680854_2681529_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|270aa|down_5|NC_017551.1_2681572_2682382_+	smart00909, Germane, Sporulation and spore germination	NA|410aa|down_6|NC_017551.1_2682495_2683725_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|135aa|down_7|NC_017551.1_2683708_2684113_-	NA	NA|368aa|down_8|NC_017551.1_2684936_2686040_-	TIGR03699, menaquin_MqnC, dehypoxanthine futalosine cyclase	NA|54aa|down_9|NC_017551.1_2686305_2686467_-	NA
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	6	3143123-3143218	6	CRISPRCasFinder	no	cas6,cas1,cas2	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	AGGAAAGCGTTGTGTTGAGTTTTCC	25	1	2	3143148-3143193|3143148-3143193	NC_017551.1_2709337-2709382|NC_017551.1_2709408-2709453	NA	1	1	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|78aa|up_3|NC_017551.1_3139884_3140118_-,NA|80aa|up_2|NC_017551.1_3140107_3140347_-,NA|67aa|up_0|NC_017551.1_3142618_3142819_-,NA|184aa|down_6|NC_017551.1_3154283_3154835_+,NA|129aa|down_7|NC_017551.1_3155177_3155564_+,NA|71aa|down_8|NC_017551.1_3155747_3155960_-	NA|778aa|up_9|NC_017551.1_3130287_3132621_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|125aa|up_8|NC_017551.1_3132631_3133006_+	PHA03334, PHA03334, putative DNA polymerase catalytic subunit; Provisional	NA|179aa|up_7|NC_017551.1_3133549_3134086_-	pfam07600, DUF1564, Protein of unknown function (DUF1564)	NA|171aa|up_6|NC_017551.1_3135999_3136512_+	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease	NA|456aa|up_5|NC_017551.1_3136864_3138232_+	pfam00743, FMO-like, Flavin-binding monooxygenase-like	NA|338aa|up_4|NC_017551.1_3138656_3139670_-	cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|78aa|up_3|NC_017551.1_3139884_3140118_-	NA	NA|80aa|up_2|NC_017551.1_3140107_3140347_-	NA	NA|664aa|up_1|NC_017551.1_3140456_3142448_+	PRK02048, PRK02048, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional	NA|67aa|up_0|NC_017551.1_3142618_3142819_-	NA	NA|222aa|down_0|NC_017551.1_3143973_3144639_-	COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	NA|281aa|down_1|NC_017551.1_3144939_3145782_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|358aa|down_2|NC_017551.1_3145837_3146911_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|589aa|down_3|NC_017551.1_3147653_3149420_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|279aa|down_4|NC_017551.1_3150646_3151483_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|499aa|down_5|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|down_6|NC_017551.1_3154283_3154835_+	NA	NA|129aa|down_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|down_8|NC_017551.1_3155747_3155960_-	NA	NA|292aa|down_9|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	7	3160604-3160853	1,1,7	PILER-CR,CRT,CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	TCTGAATATAACTTTGATGCCGTTAGGCGTTGAGCACAC,TCTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCG	39,37,28	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	2,3,3	3	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	8	3161011-3161331	2,2,8	CRT,PILER-CR,CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCG	36,36,28	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	4,2,3	4	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	9	3161489-3161590	9	CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG	28	0	0	NA	NA	I-A,I-B,II-B	1	1	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	10	3161825-3162077	3,10,3	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTCTGAATATAACTTTGATGCCGTTAGGCGTTGAGCACA,CTGAATATAACTTTGATGCCGTTAGGCG,CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC	39,28,36	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	2,3,3	3	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	11	3162190-3162512	11,4,4	CRISPRCasFinder,CRT,PILER-CR	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG,CTGAATATAACTTTGATGCCGNTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCACAGCAT	28,36,41	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	4,4,2	4	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	12	3162738-3162838	12	CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG	28	0	0	NA	NA	I-A,I-B,II-B	1	1	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	13	3163002-3163172	13	CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG	28	0	0	NA	NA	I-A,I-B,II-B	2	2	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_017551.1_3154283_3154835_+,NA|129aa|up_7|NC_017551.1_3155177_3155564_+,NA|71aa|up_6|NC_017551.1_3155747_3155960_-,NA|99aa|up_4|NC_017551.1_3157248_3157545_+,NA|69aa|up_0|NC_017551.1_3160355_3160562_-,NA|74aa|down_5|NC_017551.1_3170776_3170998_-,NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA|499aa|up_9|NC_017551.1_3151848_3153345_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_017551.1_3154283_3154835_+	NA	NA|129aa|up_7|NC_017551.1_3155177_3155564_+	NA	NA|71aa|up_6|NC_017551.1_3155747_3155960_-	NA	NA|292aa|up_5|NC_017551.1_3156221_3157097_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_017551.1_3157248_3157545_+	NA	cas6|70aa|up_3|NC_017551.1_3157620_3157830_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_017551.1_3158329_3159955_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_017551.1_3159954_3160239_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_017551.1_3160355_3160562_-	NA	cas6|211aa|down_0|NC_017551.1_3164031_3164664_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_017551.1_3164660_3166919_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_017551.1_3166920_3168804_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_017551.1_3168868_3169708_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_017551.1_3169728_3170352_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_017551.1_3170776_3170998_-	NA	NA|358aa|down_6|NC_017551.1_3171554_3172628_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_017551.1_3172929_3173358_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_017551.1_3173350_3173533_-	NA	NA|514aa|down_9|NC_017551.1_3173707_3175249_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	14	3485652-3485776	14	CRISPRCasFinder	no	csa3	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Type I-A	GATCTTGAGATAACACTTGTGGGTTGGTTATGG	33	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA,NA|60aa|down_0|NC_017551.1_3485837_3486017_+,NA|230aa|down_2|NC_017551.1_3487185_3487875_+	NA|120aa|up_9|NC_017551.1_3476839_3477199_-	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III	NA|106aa|up_8|NC_017551.1_3477198_3477516_-	cd04221, MauL, Methylamine utilization protein MauL	NA|340aa|up_7|NC_017551.1_3477548_3478568_-	TIGR03791, TTQ_mauG, tryptophan tryptophylquinone biosynthesis enzyme MauG	NA|220aa|up_6|NC_017551.1_3479911_3480571_-	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|83aa|up_5|NC_017551.1_3480567_3480816_-	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase	NA|286aa|up_4|NC_017551.1_3480791_3481649_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|378aa|up_3|NC_017551.1_3481645_3482779_-	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|231aa|up_2|NC_017551.1_3482785_3483478_-	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|224aa|up_1|NC_017551.1_3483534_3484206_-	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones]	NA|241aa|up_0|NC_017551.1_3484177_3484900_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|60aa|down_0|NC_017551.1_3485837_3486017_+	NA	NA|379aa|down_1|NC_017551.1_3486052_3487189_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|230aa|down_2|NC_017551.1_3487185_3487875_+	NA	NA|255aa|down_3|NC_017551.1_3487875_3488640_-	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|192aa|down_4|NC_017551.1_3489556_3490132_+	pfam14066, DUF4256, Protein of unknown function (DUF4256)	NA|96aa|down_5|NC_017551.1_3490811_3491099_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|302aa|down_6|NC_017551.1_3491104_3492010_-	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|139aa|down_7|NC_017551.1_3492134_3492551_-	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)	csa3|127aa|down_8|NC_017551.1_3494143_3494524_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|131aa|down_9|NC_017551.1_3494504_3494897_+	pfam13564, DoxX_2, DoxX-like family
GCF_000231175.1_ASM23117v1	NC_017551	Leptospira interrogans serovar Lai str. IPAV chromosome 1, complete sequence	15	4070025-4070120	15	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	AGGAAAGCGTTGTGTTGAGTTTTCC	25	1	2	4070050-4070095|4070050-4070095	NC_017551.1_2709337-2709382|NC_017551.1_2709408-2709453	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|140aa|up_9|NC_017551.1_4058588_4059008_+,NA|372aa|up_8|NC_017551.1_4059039_4060155_+,NA|58aa|up_7|NC_017551.1_4060187_4060361_-,NA|124aa|up_0|NC_017551.1_4069427_4069799_+,NA|163aa|down_0|NC_017551.1_4071006_4071495_-,NA|112aa|down_1|NC_017551.1_4071504_4071840_-,NA|48aa|down_8|NC_017551.1_4077604_4077748_+	NA|140aa|up_9|NC_017551.1_4058588_4059008_+	NA	NA|372aa|up_8|NC_017551.1_4059039_4060155_+	NA	NA|58aa|up_7|NC_017551.1_4060187_4060361_-	NA	NA|358aa|up_6|NC_017551.1_4060611_4061685_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|463aa|up_5|NC_017551.1_4062272_4063661_-	pfam07588, DUF1554, Protein of unknown function (DUF1554)	NA|163aa|up_4|NC_017551.1_4064759_4065248_-	pfam15428, Imm26, Immunity protein 26	NA|610aa|up_3|NC_017551.1_4065396_4067226_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|433aa|up_2|NC_017551.1_4067434_4068733_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|219aa|up_1|NC_017551.1_4068729_4069386_+	cd16373, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|124aa|up_0|NC_017551.1_4069427_4069799_+	NA	NA|163aa|down_0|NC_017551.1_4071006_4071495_-	NA	NA|112aa|down_1|NC_017551.1_4071504_4071840_-	NA	NA|184aa|down_2|NC_017551.1_4072306_4072858_-	pfam03168, LEA_2, Late embryogenesis abundant protein	NA|341aa|down_3|NC_017551.1_4072862_4073885_-	cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1	NA|109aa|down_4|NC_017551.1_4073881_4074208_-	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|165aa|down_5|NC_017551.1_4074601_4075096_+	pfam11827, DUF3347, Protein of unknown function (DUF3347)	NA|330aa|down_6|NC_017551.1_4075074_4076064_+	pfam11916, Vac14_Fig4_bd, Vacuolar protein 14 C-terminal Fig4p binding	NA|261aa|down_7|NC_017551.1_4076072_4076855_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|48aa|down_8|NC_017551.1_4077604_4077748_+	NA	NA|491aa|down_9|NC_017551.1_4077908_4079381_-	PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional
