The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_016613	Vibrio sp. EJY3 chromosome 1, complete sequence	3478307	709782	716436	3478307		Staphylococcus_phage(66.67%)	7	NA	NA
WP_014231006.1|709782_710922_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.7e-62
WP_014231007.1|710939_712190_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.4	6.1e-98
WP_014231008.1|712306_712756_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_014231009.1|712762_713881_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	37.4	4.9e-46
WP_014231010.1|713898_714552_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.0	1.8e-32
WP_014231011.1|714687_715797_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.3	2.7e-65
WP_014231012.1|715965_716436_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.0	3.7e-32
>prophage 2
NC_016613	Vibrio sp. EJY3 chromosome 1, complete sequence	3478307	2153134	2177740	3478307	integrase,tail,terminase,protease,portal	Vibrio_phage(23.08%)	24	2148864:2148876	2170109:2170121
2148864:2148876	attL	TTCAATGTCAGGG	NA	NA	NA	NA
WP_041170239.1|2153134_2154079_+|integrase	integron integrase	integrase	A0A0K2CP59	Brevibacillus_phage	27.1	1.5e-16
WP_014232291.1|2154373_2156281_+	acyltransferase	NA	A0A193GZ69	Enterobacter_phage	36.9	4.8e-94
WP_014232292.1|2156555_2159438_-	hypothetical protein	NA	A0A0H5ART3	Pseudomonas_phage	30.7	4.0e-100
WP_014232293.1|2159412_2159835_-	C40 family peptidase	NA	NA	NA	NA	NA
WP_014232294.1|2159853_2160342_-	DUF1833 family protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	40.6	1.8e-24
WP_014232295.1|2160355_2162941_-	flagellar biosynthesis, cell-distal portion of basal-body rod	NA	A0A2I7QLP4	Vibrio_phage	27.5	9.0e-19
WP_014232296.1|2162940_2163414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232298.1|2165827_2166106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232299.1|2166168_2166597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232300.1|2166648_2167173_-|tail	tail fiber protein	tail	NA	NA	NA	NA
WP_014232301.1|2167176_2167599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232302.1|2167595_2168231_-|tail	phage tail protein	tail	A0A291AWZ0	Escherichia_phage	36.8	3.3e-23
WP_049794635.1|2168227_2168533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232304.1|2168532_2168877_-	DUF2190 family protein	NA	NA	NA	NA	NA
WP_041170354.1|2168944_2170984_-|protease	Clp protease ClpP	protease	A0A1W6JT88	Pseudomonas_phage	56.0	4.2e-189
2170109:2170121	attR	TTCAATGTCAGGG	NA	NA	NA	NA
WP_014232306.1|2170976_2172503_-|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	51.6	1.9e-141
WP_014232307.1|2172499_2172712_-	hypothetical protein	NA	K7PMB5	Enterobacterial_phage	47.9	5.4e-07
WP_014232308.1|2172708_2174706_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	57.6	1.2e-209
WP_014232309.1|2174680_2175226_-|terminase	terminase small subunit	terminase	R9TRM5	Vibrio_phage	54.4	6.9e-46
WP_014232310.1|2175691_2175934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232312.1|2176045_2176309_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158308259.1|2176349_2176637_-	hypothetical protein	NA	W6E9J9	Shewanella_phage	43.2	5.8e-20
WP_014232314.1|2176689_2176980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232315.1|2177050_2177740_-	hypothetical protein	NA	R9TRM8	Vibrio_phage	48.6	9.3e-56
>prophage 3
NC_016613	Vibrio sp. EJY3 chromosome 1, complete sequence	3478307	2180989	2192705	3478307	integrase	Vibrio_phage(78.57%)	23	2175475:2175492	2198336:2198353
2175475:2175492	attL	TTGGCCGGAGCGCCGGTT	NA	NA	NA	NA
WP_014232320.1|2180989_2181961_-	DUF968 domain-containing protein	NA	R9TRM9	Vibrio_phage	42.1	1.7e-58
WP_014232321.1|2181971_2182277_-	DUF4406 domain-containing protein	NA	A0A1V0E824	Vibrio_phage	55.1	2.1e-23
WP_014232322.1|2182273_2182582_-	hypothetical protein	NA	R9TNL4	Vibrio_phage	68.6	3.7e-36
WP_014232323.1|2182578_2182767_-	hypothetical protein	NA	R9TR49	Vibrio_phage	69.5	5.7e-16
WP_014232324.1|2182763_2183462_-	phage antirepressor KilAC domain-containing protein	NA	R9TMN1	Vibrio_phage	72.9	1.4e-83
WP_014232325.1|2183628_2184615_-	helix-turn-helix domain-containing protein	NA	R9TPU9	Vibrio_phage	66.2	1.2e-112
WP_014232326.1|2184605_2184812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086027146.1|2184811_2184985_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158308260.1|2185182_2185356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014232327.1|2185352_2185862_-	phage regulatory CII family protein	NA	NA	NA	NA	NA
WP_020335501.1|2185893_2186106_-	hypothetical protein	NA	A0A1I9KFF6	Aeromonas_phage	56.1	2.0e-09
WP_014232328.1|2186141_2186942_+	helix-turn-helix transcriptional regulator	NA	W6MVG5	Pseudomonas_phage	50.0	3.6e-59
WP_014232329.1|2187107_2187491_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_014232330.1|2187834_2188227_+	hypothetical protein	NA	R9TMP0	Vibrio_phage	89.1	2.7e-60
WP_014232331.1|2188267_2189086_+	DUF2303 family protein	NA	R9TRN9	Vibrio_phage	80.1	4.4e-121
WP_014232332.1|2189146_2189521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014232333.1|2189517_2189754_+	hypothetical protein	NA	A0A1V0E8D1	Vibrio_phage	69.4	1.3e-20
WP_148263133.1|2189732_2190341_+	HNH endonuclease	NA	A0A1V0E8E4	Vibrio_phage	53.1	3.5e-54
WP_014232335.1|2190337_2190715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014232336.1|2190716_2190929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014232337.1|2190921_2191137_+	hypothetical protein	NA	A0A1V0E8D5	Vibrio_phage	37.3	4.2e-07
WP_014232338.1|2191239_2191470_+	excisionase family protein	NA	NA	NA	NA	NA
WP_014232339.1|2191469_2192705_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0U2JGI6	Escherichia_phage	40.4	1.6e-74
2198336:2198353	attR	AACCGGCGCTCCGGCCAA	NA	NA	NA	NA
>prophage 4
NC_016613	Vibrio sp. EJY3 chromosome 1, complete sequence	3478307	2935810	2952809	3478307	tRNA	uncultured_Mediterranean_phage(18.18%)	15	NA	NA
WP_014232972.1|2935810_2938393_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.7	6.6e-78
WP_014232973.1|2938535_2939003_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_014232974.1|2939117_2940164_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	1.4e-111
WP_014232975.1|2940354_2940846_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	46.8	1.1e-26
WP_014232976.1|2940930_2943492_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.3	1.2e-31
WP_014232977.1|2943566_2944553_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.2	6.9e-36
WP_041170268.1|2944633_2945557_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	36.4	1.8e-06
WP_014232979.1|2945570_2946197_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.7	6.7e-37
WP_024372917.1|2946196_2946943_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	9.7e-67
WP_014232981.1|2946972_2948016_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_014232982.1|2948058_2948538_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_014232983.1|2948551_2949259_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	26.2	3.1e-06
WP_014232984.1|2949260_2949542_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_014232985.1|2949785_2951087_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	60.3	2.7e-136
WP_014232986.1|2951168_2952809_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.1	5.5e-155
>prophage 1
NC_016614	Vibrio sp. EJY3 chromosome 2, complete sequence	1974339	1922244	1930397	1974339		Bacillus_virus(33.33%)	7	NA	NA
WP_014235081.1|1922244_1923096_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	36.9	4.4e-31
WP_014235082.1|1923125_1924157_-	taurine ABC transporter substrate-binding protein	NA	G3M9Z0	Bacillus_virus	27.3	3.2e-07
WP_014235083.1|1924372_1925788_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	A0A1V0SKB7	Klosneuvirus	24.5	1.8e-21
WP_014235084.1|1925967_1927443_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	27.8	1.8e-16
WP_014235085.1|1927636_1928362_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_014235086.1|1928396_1929173_+	SDR family NAD(P)-dependent oxidoreductase	NA	F2NZ12	Diadromus_pulchellus_ascovirus	29.6	1.0e-05
WP_014235087.1|1929701_1930397_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.4	5.6e-24
