assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	1	848632-848720	1	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Orphan	GTTGAACATTAACATGAGATGTA	23	0	0	NA	NA	III-B	1	1	Orphan	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA|156aa|up_9|NC_017299.1_835472_835940_+,NA|448aa|up_8|NC_017299.1_835946_837290_+,NA|251aa|up_2|NC_017299.1_844610_845363_+,NA	NA|156aa|up_9|NC_017299.1_835472_835940_+	NA	NA|448aa|up_8|NC_017299.1_835946_837290_+	NA	NA|329aa|up_7|NC_017299.1_837557_838544_+	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain	NA|298aa|up_6|NC_017299.1_838885_839779_+	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|252aa|up_5|NC_017299.1_839741_840497_+	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|324aa|up_4|NC_017299.1_840527_841499_+	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|155aa|up_3|NC_017299.1_843984_844449_+	TIGR01462, Transcription_elongation_factor_GreA, transcription elongation factor GreA	NA|251aa|up_2|NC_017299.1_844610_845363_+	NA	NA|486aa|up_1|NC_017299.1_845634_847092_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|386aa|up_0|NC_017299.1_847185_848343_+	cd17293, RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Paenibacillus polymyxa SQR-21 SQR21 S subunit (S	NA|1116aa|down_0|NC_017299.1_849939_853287_+	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|87aa|down_1|NC_017299.1_853378_853639_+	pfam04994, TfoX_C, TfoX C-terminal domain	NA|152aa|down_2|NC_017299.1_853736_854192_+	COG3449, COG3449, DNA gyrase inhibitor [DNA replication, recombination, and repair]	NA|309aa|down_3|NC_017299.1_854788_855715_+	PRK15442, PRK15442, beta-lactamase TEM; Provisional	NA|125aa|down_4|NC_017299.1_855920_856295_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|274aa|down_5|NC_017299.1_858868_859690_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|330aa|down_6|NC_017299.1_860240_861230_+	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|347aa|down_7|NC_017299.1_861325_862366_+	pfam01032, FecCD, FecCD transport family	NA|347aa|down_8|NC_017299.1_862365_863406_+	pfam01032, FecCD, FecCD transport family	NA|262aa|down_9|NC_017299.1_863681_864467_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	2	2310240-2310337	2	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-C	TTTAAATACATCCTATGTTACTGTTCAACCA	31	0	0	NA	NA	III-B	1	1	TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA,NA|103aa|down_8|NC_017299.1_2323789_2324098_-	NA|380aa|up_9|NC_017299.1_2297849_2298989_-	cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose	NA|664aa|up_8|NC_017299.1_2299554_2301546_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NC_017299.1_2301535_2302303_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NC_017299.1_2303089_2303443_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|698aa|up_5|NC_017299.1_2303768_2305862_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|455aa|up_4|NC_017299.1_2306073_2307438_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|95aa|up_3|NC_017299.1_2307450_2307735_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_2|NC_017299.1_2307763_2308201_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_1|NC_017299.1_2308224_2308941_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_0|NC_017299.1_2309210_2309945_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|182aa|down_0|NC_017299.1_2311158_2311704_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|267aa|down_1|NC_017299.1_2312025_2312826_-	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs	NA|469aa|down_2|NC_017299.1_2315136_2316543_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_3|NC_017299.1_2316645_2317386_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|down_4|NC_017299.1_2317392_2318283_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|174aa|down_5|NC_017299.1_2318583_2319105_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_6|NC_017299.1_2320335_2322333_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_7|NC_017299.1_2322429_2323227_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|103aa|down_8|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|down_9|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	3	2310663-2310889	1,3	PILER-CR,CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-C	TTTAAATACATCCTATGTTACTGTTCAAC,TTTAAATACATCCTATGTTACTGTTCAACCA	29,31	0	0	NA	NA	III-B:III-B	3,3	3	TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA,NA|103aa|down_8|NC_017299.1_2323789_2324098_-	NA|380aa|up_9|NC_017299.1_2297849_2298989_-	cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose	NA|664aa|up_8|NC_017299.1_2299554_2301546_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NC_017299.1_2301535_2302303_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NC_017299.1_2303089_2303443_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|698aa|up_5|NC_017299.1_2303768_2305862_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|455aa|up_4|NC_017299.1_2306073_2307438_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|95aa|up_3|NC_017299.1_2307450_2307735_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_2|NC_017299.1_2307763_2308201_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_1|NC_017299.1_2308224_2308941_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_0|NC_017299.1_2309210_2309945_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|182aa|down_0|NC_017299.1_2311158_2311704_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|267aa|down_1|NC_017299.1_2312025_2312826_-	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs	NA|469aa|down_2|NC_017299.1_2315136_2316543_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_3|NC_017299.1_2316645_2317386_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|down_4|NC_017299.1_2317392_2318283_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|174aa|down_5|NC_017299.1_2318583_2319105_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_6|NC_017299.1_2320335_2322333_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_7|NC_017299.1_2322429_2323227_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|103aa|down_8|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|down_9|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	4	2312860-2313087	4	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-D,Type III-A,Type III-B,Type III-C	ATTTAAATACATCTCATGTTAATGTTCAAT	30	0	0	NA	NA	III-B	3	3	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA,NA|103aa|down_6|NC_017299.1_2323789_2324098_-	NA|256aa|up_9|NC_017299.1_2301535_2302303_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_8|NC_017299.1_2303089_2303443_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|698aa|up_7|NC_017299.1_2303768_2305862_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|455aa|up_6|NC_017299.1_2306073_2307438_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|95aa|up_5|NC_017299.1_2307450_2307735_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_4|NC_017299.1_2307763_2308201_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_3|NC_017299.1_2308224_2308941_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_2|NC_017299.1_2309210_2309945_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|182aa|up_1|NC_017299.1_2311158_2311704_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|267aa|up_0|NC_017299.1_2312025_2312826_-	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs	NA|469aa|down_0|NC_017299.1_2315136_2316543_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_1|NC_017299.1_2316645_2317386_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|down_2|NC_017299.1_2317392_2318283_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|174aa|down_3|NC_017299.1_2318583_2319105_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_4|NC_017299.1_2320335_2322333_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_5|NC_017299.1_2322429_2323227_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|103aa|down_6|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|down_7|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|156aa|down_8|NC_017299.1_2325418_2325886_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|301aa|down_9|NC_017299.1_2325878_2326781_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	5	2319326-2319553	5	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-D,Type III-A,Type III-B,Type III-C	ATTTAAATACATCCTATGTTACTGTTCAA	29	0	0	NA	NA	III-B	3	3	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA,NA|103aa|down_2|NC_017299.1_2323789_2324098_-,csx1|450aa|down_6|NC_017299.1_2326794_2328144_-	NA|95aa|up_9|NC_017299.1_2307450_2307735_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_8|NC_017299.1_2307763_2308201_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_7|NC_017299.1_2308224_2308941_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_6|NC_017299.1_2309210_2309945_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|182aa|up_5|NC_017299.1_2311158_2311704_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|267aa|up_4|NC_017299.1_2312025_2312826_-	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs	NA|469aa|up_3|NC_017299.1_2315136_2316543_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_2|NC_017299.1_2316645_2317386_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|up_1|NC_017299.1_2317392_2318283_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|174aa|up_0|NC_017299.1_2318583_2319105_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_0|NC_017299.1_2320335_2322333_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_1|NC_017299.1_2322429_2323227_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|103aa|down_2|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|down_3|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|156aa|down_4|NC_017299.1_2325418_2325886_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|301aa|down_5|NC_017299.1_2325878_2326781_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|450aa|down_6|NC_017299.1_2326794_2328144_-	NA	cmr3gr5|368aa|down_7|NC_017299.1_2328146_2329250_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|down_8|NC_017299.1_2329230_2330976_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|397aa|down_9|NC_017299.1_2330975_2332166_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	6	2319824-2320039	6,2	CRISPRCasFinder,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-D,Type III-A,Type III-B,Type III-C	ATTTAAATACATCCTATGTTACTGTTCAA,ATTTAAATACATCCTATGTTAATGTTCAA	29,29	0	0	NA	NA	III-B:III-B	3,3	3	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA,NA|103aa|down_2|NC_017299.1_2323789_2324098_-,csx1|450aa|down_6|NC_017299.1_2326794_2328144_-	NA|95aa|up_9|NC_017299.1_2307450_2307735_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_8|NC_017299.1_2307763_2308201_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|239aa|up_7|NC_017299.1_2308224_2308941_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_6|NC_017299.1_2309210_2309945_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|182aa|up_5|NC_017299.1_2311158_2311704_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|267aa|up_4|NC_017299.1_2312025_2312826_-	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs	NA|469aa|up_3|NC_017299.1_2315136_2316543_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_2|NC_017299.1_2316645_2317386_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|up_1|NC_017299.1_2317392_2318283_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|174aa|up_0|NC_017299.1_2318583_2319105_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_0|NC_017299.1_2320335_2322333_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_1|NC_017299.1_2322429_2323227_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|103aa|down_2|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|down_3|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|156aa|down_4|NC_017299.1_2325418_2325886_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|301aa|down_5|NC_017299.1_2325878_2326781_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|450aa|down_6|NC_017299.1_2326794_2328144_-	NA	cmr3gr5|368aa|down_7|NC_017299.1_2328146_2329250_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|down_8|NC_017299.1_2329230_2330976_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|397aa|down_9|NC_017299.1_2330975_2332166_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	7	2333111-2333668	1,3,7	CRT,PILER-CR,CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-D,Type III-A,Type III-B,Type III-C	ATTTAAATACATCTTATGTTAATGTTCAAC,ATTTAAATACATCTTATGTTAATGTTCAAC,ATTTAAATACATCTTATGTTAATGTTCAAC	30,30,30	0	0	NA	NA	III-B:III-B:III-B	8,7,7	8	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA|103aa|up_8|NC_017299.1_2323789_2324098_-,csx1|450aa|up_4|NC_017299.1_2326794_2328144_-,NA|300aa|down_9|NC_017299.1_2345237_2346137_+	NA|266aa|up_9|NC_017299.1_2322429_2323227_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|103aa|up_8|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|up_7|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|156aa|up_6|NC_017299.1_2325418_2325886_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|301aa|up_5|NC_017299.1_2325878_2326781_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|450aa|up_4|NC_017299.1_2326794_2328144_-	NA	cmr3gr5|368aa|up_3|NC_017299.1_2328146_2329250_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|up_2|NC_017299.1_2329230_2330976_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|397aa|up_1|NC_017299.1_2330975_2332166_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cas6|230aa|up_0|NC_017299.1_2332211_2332901_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|529aa|down_0|NC_017299.1_2333879_2335466_-	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|283aa|down_1|NC_017299.1_2336437_2337286_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|307aa|down_2|NC_017299.1_2337576_2338497_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|down_3|NC_017299.1_2338821_2340315_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|122aa|down_4|NC_017299.1_2340710_2341076_-	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|287aa|down_5|NC_017299.1_2341148_2342009_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|169aa|down_6|NC_017299.1_2342031_2342538_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|149aa|down_7|NC_017299.1_2343094_2343541_+	pfam12638, Staygreen, Staygreen protein	NA|344aa|down_8|NC_017299.1_2343772_2344804_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|300aa|down_9|NC_017299.1_2345237_2346137_+	NA
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	8	2335819-2336173	8	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Type III-D,Type III-A,Type III-B,Type III-C	TTAAATACATCCTATGTTAATGTTCAAC	28	0	0	NA	NA	III-B	5	5	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA|103aa|up_9|NC_017299.1_2323789_2324098_-,csx1|450aa|up_5|NC_017299.1_2326794_2328144_-,NA|300aa|down_8|NC_017299.1_2345237_2346137_+	NA|103aa|up_9|NC_017299.1_2323789_2324098_-	NA	cmr6gr7|435aa|up_8|NC_017299.1_2324121_2325426_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|156aa|up_7|NC_017299.1_2325418_2325886_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|301aa|up_6|NC_017299.1_2325878_2326781_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|450aa|up_5|NC_017299.1_2326794_2328144_-	NA	cmr3gr5|368aa|up_4|NC_017299.1_2328146_2329250_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|582aa|up_3|NC_017299.1_2329230_2330976_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|397aa|up_2|NC_017299.1_2330975_2332166_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cas6|230aa|up_1|NC_017299.1_2332211_2332901_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|529aa|up_0|NC_017299.1_2333879_2335466_-	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|283aa|down_0|NC_017299.1_2336437_2337286_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|307aa|down_1|NC_017299.1_2337576_2338497_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|down_2|NC_017299.1_2338821_2340315_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|122aa|down_3|NC_017299.1_2340710_2341076_-	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|287aa|down_4|NC_017299.1_2341148_2342009_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|169aa|down_5|NC_017299.1_2342031_2342538_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|149aa|down_6|NC_017299.1_2343094_2343541_+	pfam12638, Staygreen, Staygreen protein	NA|344aa|down_7|NC_017299.1_2343772_2344804_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|300aa|down_8|NC_017299.1_2345237_2346137_+	NA	NA|441aa|down_9|NC_017299.1_2346477_2347800_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]
GCF_000253195.1_ASM25319v1	NC_017299	Clostridium botulinum H04402 065, complete genome	9	2446898-2447047	2	CRT	no		csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	Orphan	ATTCTCTGGTTTATCTTC	18	1	3	2446964-2446981|2446964-2446981|2446964-2446981	NC_017299.1_2446880-2446897|NC_017299.1_2446892-2446909|NC_017299.1_2447036-2447053	NA	3	3	Orphan	csa3,DEDDh,WYL,cas14j,RT,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,casR,cas3	NA|51aa|up_9|NC_017299.1_2437996_2438149_-,NA|795aa|up_8|NC_017299.1_2438157_2440542_-,NA|113aa|up_7|NC_017299.1_2440552_2440891_-,NA|142aa|up_6|NC_017299.1_2440901_2441327_-,NA|82aa|up_5|NC_017299.1_2441653_2441899_-,NA|52aa|up_4|NC_017299.1_2441900_2442056_-,NA|188aa|up_1|NC_017299.1_2443784_2444348_+,NA|77aa|up_0|NC_017299.1_2444682_2444913_-,NA|58aa|down_1|NC_017299.1_2449193_2449367_-,NA|131aa|down_5|NC_017299.1_2451307_2451700_-	NA|51aa|up_9|NC_017299.1_2437996_2438149_-	NA	NA|795aa|up_8|NC_017299.1_2438157_2440542_-	NA	NA|113aa|up_7|NC_017299.1_2440552_2440891_-	NA	NA|142aa|up_6|NC_017299.1_2440901_2441327_-	NA	NA|82aa|up_5|NC_017299.1_2441653_2441899_-	NA	NA|52aa|up_4|NC_017299.1_2441900_2442056_-	NA	NA|56aa|up_3|NC_017299.1_2442237_2442405_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|292aa|up_2|NC_017299.1_2442894_2443770_+	pfam13205, Big_5, Bacterial Ig-like domain	NA|188aa|up_1|NC_017299.1_2443784_2444348_+	NA	NA|77aa|up_0|NC_017299.1_2444682_2444913_-	NA	NA|341aa|down_0|NC_017299.1_2448135_2449158_-	cd06525, GH25_Lyc-like, Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene	NA|58aa|down_1|NC_017299.1_2449193_2449367_-	NA	NA|75aa|down_2|NC_017299.1_2449379_2449604_-	pfam10779, XhlA, Haemolysin XhlA	NA|388aa|down_3|NC_017299.1_2449811_2450975_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|41aa|down_4|NC_017299.1_2451192_2451315_-	pfam09693, Phage_XkdX, Phage uncharacterized protein (Phage_XkdX)	NA|131aa|down_5|NC_017299.1_2451307_2451700_-	NA	NA|572aa|down_6|NC_017299.1_2451732_2453448_-	pfam12571, DUF3751, Phage tail-collar fibre protein	NA|212aa|down_7|NC_017299.1_2453484_2454120_-	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313)	NA|377aa|down_8|NC_017299.1_2454116_2455247_-	pfam04865, Baseplate_J, Baseplate J-like protein	NA|151aa|down_9|NC_017299.1_2455252_2455705_-	pfam10934, DUF2634, Protein of unknown function (DUF2634)
