assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000253335.1_ASM25333v1	NC_015760	Streptococcus salivarius CCHSS3, complete genome	1	1168248-1170289	1,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Type I-E	GGGATCACCCCCGCGTGTGCGGGAAAAAC,GGATCACCCCCGCGTGTGCGGGAAAAAC,GGGATCACCCCCGCGTGTGCGGGAAAAAC,GGATCACCCCCGCGTGTGCGGGAAAAAC,TGGGATCACCCCCGCGTGTGCGGGAAAAAC	29,28,29,28,30	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	33,32,25,25,25	33	TypeI-E	cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA|430aa|up_1|NC_015760.1_1165983_1167273_+,NA|81aa|up_0|NC_015760.1_1167544_1167787_-,NA	NA|291aa|up_9|NC_015760.1_1150212_1151085_-	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon	NA|1238aa|up_8|NC_015760.1_1151334_1155048_-	TIGR02102, alkaline_amylopullulanase, pullulanase, extracellular, Gram-positive	NA|1188aa|up_7|NC_015760.1_1155167_1158731_-	cd06522, GH25_AtlA-like, AtlA is an autolysin found in Gram-positive lactic acid bacteria that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues	NA|586aa|up_6|NC_015760.1_1159003_1160761_-	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|463aa|up_5|NC_015760.1_1160932_1162321_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|333aa|up_4|NC_015760.1_1162556_1163555_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|324aa|up_3|NC_015760.1_1163579_1164551_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|419aa|up_2|NC_015760.1_1164737_1165994_+	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing	NA|430aa|up_1|NC_015760.1_1165983_1167273_+	NA	NA|81aa|up_0|NC_015760.1_1167544_1167787_-	NA	DEDDh|302aa|down_0|NC_015760.1_1170309_1171215_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|314aa|down_1|NC_015760.1_1171216_1172158_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|213aa|down_2|NC_015760.1_1172161_1172800_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|242aa|down_3|NC_015760.1_1172804_1173530_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|356aa|down_4|NC_015760.1_1173544_1174612_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|198aa|down_5|NC_015760.1_1174601_1175195_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|556aa|down_6|NC_015760.1_1175204_1176872_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|927aa|down_7|NC_015760.1_1176858_1179639_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|329aa|down_8|NC_015760.1_1179783_1180770_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|646aa|down_9|NC_015760.1_1181022_1182960_-	pfam09972, DUF2207, Predicted membrane protein (DUF2207)
GCF_000253335.1_ASM25333v1	NC_015760	Streptococcus salivarius CCHSS3, complete genome	2	1266183-1266254	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Orphan	GGACCTAAAAAGGTCCACTGAAC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA|250aa|up_5|NC_015760.1_1257583_1258333_-,NA|47aa|down_4|NC_015760.1_1269971_1270112_-,NA|81aa|down_5|NC_015760.1_1270415_1270658_-	NA|424aa|up_9|NC_015760.1_1253119_1254391_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|79aa|up_8|NC_015760.1_1254458_1254695_-	TIGR02327, conserved_hypothetical_protein, conserved hypothetical integral membrane protein	NA|368aa|up_7|NC_015760.1_1255016_1256120_-	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8	NA|437aa|up_6|NC_015760.1_1256128_1257439_-	cd06423, CESA_like, CESA_like is  the cellulose synthase superfamily	NA|250aa|up_5|NC_015760.1_1257583_1258333_-	NA	NA|384aa|up_4|NC_015760.1_1258374_1259526_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|329aa|up_3|NC_015760.1_1262326_1263313_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|398aa|up_2|NC_015760.1_1263457_1264651_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|313aa|up_1|NC_015760.1_1264930_1265869_+	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|62aa|up_0|NC_015760.1_1265855_1266041_-	pfam11676, DUF3272, Protein of unknown function (DUF3272)	NA|551aa|down_0|NC_015760.1_1266258_1267911_-	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|170aa|down_1|NC_015760.1_1267910_1268420_-	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|304aa|down_2|NC_015760.1_1268444_1269356_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|59aa|down_3|NC_015760.1_1269431_1269608_+	pfam11240, DUF3042, Protein of unknown function (DUF3042)	NA|47aa|down_4|NC_015760.1_1269971_1270112_-	NA	NA|81aa|down_5|NC_015760.1_1270415_1270658_-	NA	NA|265aa|down_6|NC_015760.1_1270782_1271577_-	pfam04233, Phage_Mu_F, Phage Mu protein F like protein	NA|155aa|down_7|NC_015760.1_1271925_1272390_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|116aa|down_8|NC_015760.1_1273044_1273392_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|408aa|down_9|NC_015760.1_1273522_1274746_-	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins
