assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000255955.1_ASM25595v1	NC_017063	Helicobacter pylori ELS37, complete genome	1	381614-381812	1	CRT	no		cas14j,c2c9_V-U4,cas3,DEDDh	Orphan	TATTAAAGTTATAAGTCCCTTGATTGAA	28	0	0	NA	NA	I-B	3	3	Orphan	cas14j,c2c9_V-U4,cas3,DEDDh	NA,NA|196aa|down_9|NC_017063.1_400544_401132_-	NA|252aa|up_9|NC_017063.1_366877_367633_-	COG0602, NrdG, Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]	NA|201aa|up_8|NC_017063.1_367636_368239_-	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]	NA|268aa|up_7|NC_017063.1_368895_369699_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|304aa|up_6|NC_017063.1_369695_370607_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|181aa|up_5|NC_017063.1_370622_371165_-	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|327aa|up_4|NC_017063.1_371165_372146_-	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|382aa|up_3|NC_017063.1_372084_373230_-	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|194aa|up_2|NC_017063.1_373226_373808_-	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|69aa|up_1|NC_017063.1_373954_374161_+	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|370aa|up_0|NC_017063.1_374228_375338_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|333aa|down_0|NC_017063.1_382675_383674_-	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|231aa|down_1|NC_017063.1_383818_384511_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|144aa|down_2|NC_017063.1_387871_388303_+	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|816aa|down_3|NC_017063.1_388476_390924_+	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|515aa|down_4|NC_017063.1_391252_392797_+	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|527aa|down_5|NC_017063.1_393360_394941_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|513aa|down_6|NC_017063.1_394962_396501_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|676aa|down_7|NC_017063.1_397353_399381_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|383aa|down_8|NC_017063.1_399374_400523_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|196aa|down_9|NC_017063.1_400544_401132_-	NA
GCF_000255955.1_ASM25595v1	NC_017063	Helicobacter pylori ELS37, complete genome	2	719092-719238	1	CRISPRCasFinder	no		cas14j,c2c9_V-U4,cas3,DEDDh	Orphan	GTTGAAATTAAACGAACCGCCATTAAA	27	0	0	NA	NA	NA	2	2	Orphan	cas14j,c2c9_V-U4,cas3,DEDDh	NA|112aa|up_2|NC_017063.1_709664_710000_+,NA|252aa|up_0|NC_017063.1_710992_711748_+,NA|190aa|down_5|NC_017063.1_728432_729002_-	NA|748aa|up_9|NC_017063.1_698746_700990_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|174aa|up_8|NC_017063.1_701143_701665_-	PRK01250, PRK01250, inorganic diphosphatase	NA|333aa|up_7|NC_017063.1_703169_704168_-	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|192aa|up_6|NC_017063.1_704192_704768_-	PRK00279, adk, adenylate kinase; Reviewed	NA|578aa|up_5|NC_017063.1_704784_706518_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|314aa|up_4|NC_017063.1_706552_707494_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|657aa|up_3|NC_017063.1_707571_709542_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|112aa|up_2|NC_017063.1_709664_710000_+	NA	NA|216aa|up_1|NC_017063.1_710345_710993_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|252aa|up_0|NC_017063.1_710992_711748_+	NA	NA|190aa|down_0|NC_017063.1_721528_722098_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|1027aa|down_1|NC_017063.1_722094_725175_-	pfam00873, ACR_tran, AcrB/AcrD/AcrF family	NA|235aa|down_2|NC_017063.1_725187_725892_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|478aa|down_3|NC_017063.1_725902_727336_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|341aa|down_4|NC_017063.1_727344_728367_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|190aa|down_5|NC_017063.1_728432_729002_-	NA	NA|219aa|down_6|NC_017063.1_729046_729703_-	PRK13913, PRK13913, 3-methyladenine DNA glycosylase; Provisional	NA|511aa|down_7|NC_017063.1_729820_731353_-	PRK12584, PRK12584, flagellin A; Reviewed	NA|299aa|down_8|NC_017063.1_731516_732413_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|434aa|down_9|NC_017063.1_733366_734668_+	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain
GCF_000255955.1_ASM25595v1	NC_017063	Helicobacter pylori ELS37, complete genome	3	1034934-1035175	1	PILER-CR	no		cas14j,c2c9_V-U4,cas3,DEDDh	Orphan	AAACACCCACCATCATAATTTAATTCACAAGCTTTAGAGTAGTATTGAATGGCTTT	56	0	0	NA	NA	NA	2	2	Orphan	cas14j,c2c9_V-U4,cas3,DEDDh	NA|187aa|up_1|NC_017063.1_1033675_1034236_-,NA|113aa|up_0|NC_017063.1_1034219_1034558_-,NA	NA|619aa|up_9|NC_017063.1_1023153_1025010_-	TIGR00204, 1-deoxy-D-xylulose-5-phosphate_synthase, 1-deoxy-D-xylulose-5-phosphate synthase	NA|259aa|up_8|NC_017063.1_1025006_1025783_-	PRK06669, fliH, flagellar assembly protein H; Validated	NA|344aa|up_7|NC_017063.1_1025769_1026801_-	TIGR00207, Flagellar_motor_switch_protein_FliG, flagellar motor switch protein FliG	NA|568aa|up_6|NC_017063.1_1026813_1028517_-	TIGR00206, Flagellar_M-ring_protein, flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)	NA|221aa|up_5|NC_017063.1_1028560_1029223_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|539aa|up_4|NC_017063.1_1029481_1031098_+	PRK05380, pyrG, CTP synthetase; Validated	NA|517aa|up_3|NC_017063.1_1031106_1032657_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|294aa|up_2|NC_017063.1_1032656_1033538_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|187aa|up_1|NC_017063.1_1033675_1034236_-	NA	NA|113aa|up_0|NC_017063.1_1034219_1034558_-	NA	NA|135aa|down_0|NC_017063.1_1035708_1036113_-	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|267aa|down_1|NC_017063.1_1036109_1036910_-	TIGR00732, Protein_smf, DNA protecting protein DprA	NA|78aa|down_2|NC_017063.1_1036916_1037150_-	TIGR01215, Cell_division_topological_specificity_factor, cell division topological specificity factor MinE	NA|269aa|down_3|NC_017063.1_1037146_1037953_-	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|331aa|down_4|NC_017063.1_1037976_1038969_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|261aa|down_5|NC_017063.1_1039217_1040000_+	PRK13980, PRK13980, NAD synthetase; Provisional	NA|313aa|down_6|NC_017063.1_1039996_1040935_+	COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]	NA|181aa|down_7|NC_017063.1_1040867_1041410_-	TIGR03585, PseH, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA|298aa|down_8|NC_017063.1_1041406_1042300_-	COG3980, spsG, Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|230aa|down_9|NC_017063.1_1042269_1042959_-	TIGR03584, PseF, pseudaminic acid cytidylyltransferase
