The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	643455	653346	4238624		Synechococcus_phage(50.0%)	9	NA	NA
WP_014417100.1|643455_644748_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.3	4.5e-19
WP_014417101.1|644823_645543_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	44.3	1.7e-47
WP_014417102.1|645542_645797_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	M4QPE7	Synechococcus_phage	33.3	4.7e-05
WP_014417103.1|645793_646477_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_014417104.1|646460_648689_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	4.2e-158
WP_014417105.1|648664_650095_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	6.2e-54
WP_014417106.1|650186_651227_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.1	1.8e-63
WP_007408902.1|651223_651811_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.8	1.3e-26
WP_014417107.1|651807_653346_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	50.5	3.3e-77
>prophage 2
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1110326	1143930	4238624	protease,coat,tRNA	Planktothrix_phage(16.67%)	38	NA	NA
WP_014417415.1|1110326_1111319_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_014417416.1|1112062_1113697_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014417417.1|1113803_1114739_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014417418.1|1114742_1115660_+	oligopeptide ABC transporter permease OppC	NA	NA	NA	NA	NA
WP_003155039.1|1115672_1116749_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.9	1.7e-16
WP_014417419.1|1116741_1117659_+	oligopeptide ABC transporter ATP-binding protein OppF	NA	M1HP82	Acanthocystis_turfacea_Chlorella_virus	24.6	1.5e-05
WP_014417420.1|1117765_1118962_+	putative glycoside hydrolase	NA	NA	NA	NA	NA
WP_007409110.1|1119070_1119649_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003155034.1|1119827_1120223_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_014417421.1|1120279_1120936_-	TerC family protein	NA	W8EBD0	Pseudomonas_phage	41.9	2.2e-30
WP_003155032.1|1121211_1121868_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_014417422.1|1122019_1123180_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_003155028.1|1123407_1125237_+	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_003155026.1|1125274_1125442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003155024.1|1125728_1126631_-|protease	protease adaptor protein SpxH	protease	NA	NA	NA	NA
WP_014417424.1|1126627_1127026_-	thiol management oxidoreductase	NA	NA	NA	NA	NA
WP_014721000.1|1127254_1127941_-	lytic transglycosylase domain-containing protein	NA	A0A1P8CWQ1	Bacillus_phage	70.3	2.3e-38
WP_014417426.1|1127945_1128518_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_012117290.1|1128642_1129008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003155019.1|1129035_1129671_+	GTP diphosphokinase	NA	NA	NA	NA	NA
WP_003155018.1|1129688_1130489_+	NAD kinase	NA	NA	NA	NA	NA
WP_014417427.1|1130503_1131397_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.3	1.4e-06
WP_007409101.1|1131429_1132179_-	bis(5'-nucleosyl)-tetraphosphatase PrpE	NA	A0A1V0SJW2	Klosneuvirus	26.4	9.9e-11
WP_014417428.1|1132406_1134251_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_015417218.1|1134500_1135208_+	thiaminase II	NA	NA	NA	NA	NA
WP_014721002.1|1135185_1135803_+	thiazole tautomerase TenI	NA	NA	NA	NA	NA
WP_014417430.1|1135786_1136896_+	glycine oxidase ThiO	NA	NA	NA	NA	NA
WP_007409096.1|1136892_1137096_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_007610655.1|1137092_1137863_+	thiazole synthase	NA	NA	NA	NA	NA
WP_014417431.1|1137859_1138870_+	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA	NA
WP_014417432.1|1138892_1139705_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003155001.1|1139835_1140612_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_014721003.1|1140703_1141318_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_003154997.1|1141376_1141820_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_003154995.1|1141965_1142448_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_014417434.1|1142598_1143099_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_014417435.1|1143191_1143506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014417436.1|1143543_1143930_-|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 3
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1165036	1183082	4238624	transposase,head,tail,portal	Bacillus_phage(58.33%)	18	NA	NA
WP_014721011.1|1165036_1165513_+	hypothetical protein	NA	O64060	Bacillus_phage	45.5	5.9e-33
WP_014417455.1|1165512_1166226_+	hypothetical protein	NA	A0A1P8CWQ7	Bacillus_phage	42.4	5.7e-48
WP_014417456.1|1166249_1167035_+	hypothetical protein	NA	A0A1P8CWR0	Bacillus_phage	48.4	1.1e-36
WP_014417457.1|1167043_1167631_+	hypothetical protein	NA	A0A1P8CWQ5	Bacillus_phage	47.8	9.7e-38
WP_014417458.1|1167630_1167858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417459.1|1167892_1168366_+	hypothetical protein	NA	A0A1P8CWQ6	Bacillus_phage	38.7	6.5e-24
WP_017417543.1|1168569_1168719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014721012.1|1168958_1169171_+	helix-turn-helix domain-containing protein	NA	A0A1Z1LZP5	Bacillus_phage	51.6	4.5e-09
WP_014417460.1|1169254_1169662_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014417461.1|1169678_1170242_-	recombinase family protein	NA	A0A0A8WIK3	Clostridium_phage	50.5	3.7e-42
WP_014417462.1|1170594_1172352_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	46.5	3.5e-147
WP_014417463.1|1172366_1173701_+|portal	phage portal protein	portal	I1TJV4	Clostridium_phage	31.1	2.3e-42
WP_014417464.1|1173808_1174408_+	DUF4355 domain-containing protein	NA	A0A2H4J4P4	uncultured_Caudovirales_phage	44.5	4.0e-31
WP_014417465.1|1174436_1175255_+	hypothetical protein	NA	E5DV53	Deep-sea_thermophilic_phage	43.3	3.8e-56
WP_014417466.1|1175316_1175463_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025649600.1|1175462_1175780_+|head,tail	phage head-tail connector protein	head,tail	NA	NA	NA	NA
WP_025649601.1|1175790_1176129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417467.1|1176206_1183082_+|tail	phage tail tape measure protein	tail	A0A1P8CWQ1	Bacillus_phage	56.9	0.0e+00
>prophage 4
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1238927	1250943	4238624	holin,portal,terminase	uncultured_Caudovirales_phage(40.0%)	22	NA	NA
WP_087920760.1|1238927_1240064_+	S9 family peptidase	NA	A0A1P8CWN8	Bacillus_phage	47.9	1.3e-94
WP_003154881.1|1240053_1240188_+	PhrA family phosphatase inhibitor	NA	NA	NA	NA	NA
WP_014417515.1|1240330_1241284_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A218KC88	Bacillus_phage	69.3	1.1e-62
WP_007610770.1|1241321_1241699_-	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	41.4	1.5e-15
WP_014417516.1|1241808_1242414_+	poly-gamma-glutamate hydrolase family protein	NA	A0A0Y0AJU6	Bacillus_phage	48.3	1.0e-42
WP_014721040.1|1242403_1242550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417517.1|1242536_1243127_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	3.0e-39
WP_003154871.1|1243274_1243613_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	8.4e-18
WP_014417518.1|1243803_1243983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417519.1|1243972_1244800_+|portal	phage portal protein	portal	S6BFM4	Thermus_phage	50.0	5.8e-20
WP_014417520.1|1244699_1245500_+	ATP-binding protein	NA	A6XMI1	Bacillus_virus	45.3	3.0e-58
WP_014417521.1|1245499_1245676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417522.1|1245764_1246106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003154859.1|1246095_1246299_+	XtrA/YqaO family protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	48.5	5.4e-12
WP_012117362.1|1246405_1246918_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0K2CNQ1	Brevibacillus_phage	44.6	2.9e-22
WP_014417523.1|1247030_1247690_+|terminase	terminase	terminase	A0A1B1P867	Bacillus_phage	33.3	3.4e-07
WP_014417525.1|1248067_1248439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007610833.1|1248443_1248641_+	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	61.8	7.3e-14
WP_014417526.1|1248697_1249459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003154815.1|1249510_1249774_+	hemolysin XhlA family protein	NA	A0A2H4JD40	uncultured_Caudovirales_phage	63.1	8.8e-23
WP_003154813.1|1249787_1250051_+|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	65.5	2.3e-23
WP_007407257.1|1250064_1250943_+	N-acetylmuramoyl-L-alanine amidase	NA	Q9ZXD7	Bacillus_phage	60.5	3.7e-81
>prophage 5
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1847357	1853571	4238624		Bacillus_phage(50.0%)	6	NA	NA
WP_014417834.1|1847357_1847750_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	59.1	5.0e-30
WP_007611605.1|1847709_1849812_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	85.7	0.0e+00
WP_012117608.1|1849829_1850819_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.0	1.1e-155
WP_014417835.1|1850867_1851488_+	hypothetical protein	NA	A0A127AYS1	Bacillus_phage	48.4	5.4e-47
WP_007410370.1|1851537_1852296_-	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	50.4	1.1e-52
WP_014721211.1|1852602_1853571_+	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.9	8.0e-53
>prophage 6
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1863507	1878748	4238624	holin	Bacillus_phage(100.0%)	14	NA	NA
WP_014417844.1|1863507_1863996_+	SMI1/KNR4 family protein	NA	O64024	Bacillus_phage	89.4	5.2e-85
WP_076982784.1|1864882_1864972_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_041481757.1|1865207_1865411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417846.1|1865540_1866314_+	sporulation protein YunB	NA	NA	NA	NA	NA
WP_014417847.1|1866541_1866874_+	YolD-like family protein	NA	A0A1P8CWP2	Bacillus_phage	74.5	1.1e-41
WP_014417848.1|1866866_1868117_+	UV-damage repair protein uvrX	NA	O64031	Bacillus_phage	91.1	2.0e-221
WP_014417849.1|1868280_1869441_-	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	26.0	8.4e-33
WP_014721218.1|1869592_1869853_-	collagen-like protein	NA	NA	NA	NA	NA
WP_014417851.1|1870207_1870459_-|holin	phage holin	holin	A0A1P8CWN5	Bacillus_phage	86.7	5.2e-33
WP_014417852.1|1870479_1870872_-	hypothetical protein	NA	A0A1P8CWP1	Bacillus_phage	97.7	7.1e-61
WP_014417853.1|1870986_1872030_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A1J0MS59	Bacillus_phage	56.4	7.9e-91
WP_014417854.1|1872205_1874764_-	Pre-neck appendage protein	NA	D6R401	Bacillus_phage	37.1	3.5e-140
WP_014417855.1|1874805_1875624_-	hypothetical protein	NA	A0A1P8CWP7	Bacillus_phage	68.6	8.1e-107
WP_014417856.1|1876114_1878748_-	hypothetical protein	NA	A0A1P8CWQ0	Bacillus_phage	70.4	0.0e+00
>prophage 7
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1886517	1902314	4238624	integrase	Bacillus_phage(70.59%)	23	1881070:1881084	1894326:1894340
1881070:1881084	attL	TTGATTTCTTTTTCA	NA	NA	NA	NA
WP_014417859.1|1886517_1887144_-	hypothetical protein	NA	A0A0H3UZD5	Geobacillus_virus	28.9	3.1e-18
WP_041481759.1|1887217_1887631_-	hypothetical protein	NA	O64047	Bacillus_phage	45.5	5.1e-25
WP_041481760.1|1887716_1887896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014417860.1|1887958_1888531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014721221.1|1888676_1888862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014417861.1|1888911_1889931_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0E3U2P3	Fusobacterium_phage	35.8	3.9e-50
WP_014417862.1|1889944_1890361_-	hypothetical protein	NA	A0A1P8CWQ4	Bacillus_phage	66.2	3.1e-46
WP_014417863.1|1890360_1890846_-	hypothetical protein	NA	A0A1P8CWQ6	Bacillus_phage	72.9	4.8e-59
WP_076983899.1|1890928_1891129_-	XkdX family protein	NA	A0A1P8CWR4	Bacillus_phage	64.8	1.2e-11
WP_014417865.1|1891462_1892797_-	hypothetical protein	NA	A0A1P8CWR7	Bacillus_phage	34.4	1.3e-26
WP_014417866.1|1892796_1893153_-	hypothetical protein	NA	O64055	Bacillus_phage	78.0	2.6e-46
WP_014470099.1|1893224_1893692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014417867.1|1893712_1894504_-	hypothetical protein	NA	A0A1P8CWR0	Bacillus_phage	36.8	5.2e-18
1894326:1894340	attR	TTGATTTCTTTTTCA	NA	NA	NA	NA
WP_014417868.1|1894542_1895268_-	hypothetical protein	NA	A0A1P8CWQ7	Bacillus_phage	33.2	1.9e-27
WP_014417869.1|1895264_1895771_-	hypothetical protein	NA	O64060	Bacillus_phage	68.5	6.8e-64
WP_014417870.1|1895767_1896433_-	hypothetical protein	NA	A0A1P8CWR8	Bacillus_phage	53.6	5.3e-48
WP_041481761.1|1896429_1896750_-	hypothetical protein	NA	U5J9I5	Bacillus_phage	38.8	2.6e-16
WP_041481804.1|1896746_1897055_-	hypothetical protein	NA	A0A0H3UZ42	Geobacillus_virus	42.9	4.3e-13
WP_014417871.1|1897190_1897724_-	hypothetical protein	NA	A0A0K2FLE1	Brevibacillus_phage	40.8	6.6e-25
WP_014417872.1|1897776_1898769_-	hypothetical protein	NA	E0YJ30	Lactococcus_phage	31.6	2.0e-35
WP_014417873.1|1898793_1899336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101294002.1|1899360_1899561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014417875.1|1900871_1902314_-	hypothetical protein	NA	U5J9V5	Bacillus_phage	39.5	3.5e-89
>prophage 8
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	1927769	1995245	4238624	integrase,tRNA	Bacillus_phage(90.54%)	112	1936886:1936904	1967200:1967218
WP_014417898.1|1927769_1928861_-	acyltransferase	NA	A9YX16	Burkholderia_phage	24.6	1.6e-09
WP_041481764.1|1929164_1929608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417899.1|1929695_1929899_+	helix-turn-helix transcriptional regulator	NA	A0A1P8CWU2	Bacillus_phage	78.8	1.2e-22
WP_014417900.1|1929954_1930170_+	helix-turn-helix transcriptional regulator	NA	O64085	Bacillus_phage	42.3	2.7e-09
WP_014417901.1|1930258_1930705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481765.1|1930742_1931075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417902.1|1931202_1932555_+	hypothetical protein	NA	O64086	Bacillus_phage	42.0	1.9e-89
WP_050979331.1|1932586_1932814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481766.1|1932842_1933067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417903.1|1933081_1933264_-	hypothetical protein	NA	A0A1P8CWV7	Bacillus_phage	87.9	1.7e-25
WP_014417904.1|1933334_1933586_+	hypothetical protein	NA	A0A1P8CWV6	Bacillus_phage	63.4	3.2e-22
WP_014417905.1|1933815_1933947_+	hypothetical protein	NA	A0A1P8CWV9	Bacillus_phage	90.7	9.4e-18
WP_014417906.1|1934023_1934473_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481767.1|1934809_1935061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417907.1|1935233_1936388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142295830.1|1936416_1936542_+	lysogeny pheromone AimP family peptide	NA	NA	NA	NA	NA
WP_014721235.1|1936667_1936823_+	hypothetical protein	NA	A0A1P8CWW2	Bacillus_phage	68.6	4.5e-11
1936886:1936904	attL	TGAATAAAAATAAAATAAA	NA	NA	NA	NA
WP_041481768.1|1936972_1937185_+	hypothetical protein	NA	A0A1P8CWW7	Bacillus_phage	76.9	6.0e-22
WP_041481769.1|1937199_1937430_+	hypothetical protein	NA	A0A1P8CWW1	Bacillus_phage	72.3	7.2e-21
WP_014721236.1|1937468_1937633_+	hypothetical protein	NA	A0A1P8CWX2	Bacillus_phage	52.6	3.9e-05
WP_014417908.1|1937642_1938701_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8CWW9	Bacillus_phage	75.4	3.0e-154
WP_014417909.1|1938777_1940127_+	hypothetical protein	NA	A0A1P8CWX1	Bacillus_phage	75.4	3.7e-189
WP_014417910.1|1940147_1941131_+|integrase	integrase	integrase	A0A1P8CWX4	Bacillus_phage	77.4	7.4e-139
WP_021493552.1|1941351_1941573_-	helix-turn-helix transcriptional regulator	NA	A0A1P8CWW6	Bacillus_phage	79.5	2.2e-27
WP_014417911.1|1941738_1942038_+	hypothetical protein	NA	A0A1P8CWX3	Bacillus_phage	51.0	3.6e-20
WP_021493551.1|1942112_1942358_+	hypothetical protein	NA	A0A1P8CWW5	Bacillus_phage	52.0	5.7e-16
WP_041481771.1|1942726_1942909_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481772.1|1942905_1943121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417912.1|1943117_1943294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417914.1|1943856_1944156_+	hypothetical protein	NA	A0A0S2SXU1	Bacillus_phage	35.2	9.1e-08
WP_014417915.1|1944912_1945215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417916.1|1945250_1945487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021493536.1|1945677_1945893_+	hypothetical protein	NA	A0A1P8CX01	Bacillus_phage	91.5	6.1e-30
WP_041481774.1|1945906_1946281_-	hypothetical protein	NA	A0A1P8CWZ2	Bacillus_phage	62.6	1.2e-36
WP_014417917.1|1946400_1946613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481775.1|1946631_1946880_+	hypothetical protein	NA	F8UBL6	Clostridium_phage	46.2	1.7e-12
WP_014417918.1|1946921_1947284_+	hypothetical protein	NA	A0A140HLN5	Bacillus_phage	48.1	1.7e-32
WP_014417919.1|1947635_1948433_+	hypothetical protein	NA	A0A1P8CWY7	Bacillus_phage	60.1	6.1e-75
WP_050979332.1|1948594_1948960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417920.1|1949071_1949884_-	ATP-dependent DNA ligase	NA	O64130	Bacillus_phage	86.3	1.1e-137
WP_014417921.1|1949953_1950628_-	SOS response-associated peptidase	NA	A0A1P8CX02	Bacillus_phage	95.1	3.9e-75
WP_014417922.1|1950699_1950915_+	hypothetical protein	NA	O64132	Bacillus_phage	85.5	7.4e-28
WP_014721243.1|1950999_1951146_+	hypothetical protein	NA	A0A1P8CWZ9	Bacillus_phage	100.0	1.7e-12
WP_014417923.1|1951151_1951622_+	hypothetical protein	NA	D9J0I1	Brochothrix_phage	35.5	8.7e-13
WP_014417924.1|1951883_1952708_+	poly-gamma-glutamate hydrolase family protein	NA	O64134	Bacillus_phage	60.8	1.1e-84
WP_014417925.1|1952704_1954450_+	right-handed parallel beta-helix repeat-containing protein	NA	O64135	Bacillus_phage	64.0	8.9e-220
WP_014417927.1|1955020_1955398_+	hypothetical protein	NA	A0A1P8CX06	Bacillus_phage	76.2	1.3e-51
WP_173363126.1|1955503_1955671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481776.1|1955928_1956303_+	hypothetical protein	NA	A0A1P8CX10	Bacillus_phage	78.2	6.8e-53
WP_014417928.1|1956330_1957245_+	hypothetical protein	NA	A0A1P8CX09	Bacillus_phage	89.5	3.4e-154
WP_014417929.1|1957334_1958306_+	ATP-binding protein	NA	A0A1P8CX29	Bacillus_phage	59.8	4.8e-114
WP_014417930.1|1958348_1958819_+	hypothetical protein	NA	A0A1P8CX08	Bacillus_phage	89.7	7.4e-81
WP_014417931.1|1958833_1960351_+	hypothetical protein	NA	A0A1P8CWZ7	Bacillus_phage	71.7	1.2e-212
WP_014417932.1|1960366_1961503_+	hypothetical protein	NA	A0A1P8CX05	Bacillus_phage	90.2	1.1e-205
WP_014417933.1|1961502_1963230_+	single-stranded-DNA-specific exonuclease RecJ	NA	A0A1P8CX07	Bacillus_phage	80.7	5.8e-272
WP_014417934.1|1963242_1967172_+	DNA polymerase III subunit alpha	NA	A0A1P8CX14	Bacillus_phage	81.6	0.0e+00
WP_014417935.1|1967198_1967906_+	3D domain-containing protein	NA	A0A1P8CX16	Bacillus_phage	36.3	8.7e-25
1967200:1967218	attR	TGAATAAAAATAAAATAAA	NA	NA	NA	NA
WP_014417936.1|1967917_1968121_+	YorP family protein	NA	O64150	Bacillus_phage	80.6	1.0e-26
WP_014417937.1|1968125_1968284_+	hypothetical protein	NA	A0A1P8CX36	Bacillus_phage	64.7	1.9e-12
WP_014417938.1|1968280_1968778_+	deoxynucleoside kinase	NA	A0A1P8CX28	Bacillus_phage	78.8	2.5e-71
WP_014417939.1|1968817_1969165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041481777.1|1969289_1969559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017697084.1|1969590_1969869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417940.1|1969919_1970138_+	hypothetical protein	NA	O64155	Bacillus_phage	61.4	1.9e-15
WP_014417943.1|1970918_1971182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481779.1|1971476_1971683_+	hypothetical protein	NA	A0A1P8CX41	Bacillus_phage	48.1	4.5e-06
WP_020954083.1|1971882_1972062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417945.1|1972534_1972942_+	hypothetical protein	NA	A0A1P8CX27	Bacillus_phage	62.7	9.7e-37
WP_014417946.1|1972956_1973304_+	hypothetical protein	NA	O64164	Bacillus_phage	91.3	1.4e-52
WP_021493488.1|1973348_1973654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021493487.1|1973680_1974052_+	hypothetical protein	NA	A0A1B1IUA0	uncultured_Mediterranean_phage	32.9	5.1e-08
WP_014417948.1|1974089_1974419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417949.1|1974444_1974822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417950.1|1974828_1975041_+	DUF1653 domain-containing protein	NA	A0A1P8CX21	Bacillus_phage	78.6	2.5e-28
WP_014417951.1|1975056_1975395_+	hypothetical protein	NA	O64167	Bacillus_phage	90.3	4.9e-50
WP_014417953.1|1975553_1975799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014721253.1|1975791_1975926_+	hypothetical protein	NA	O64168	Bacillus_phage	93.2	8.1e-17
WP_004399360.1|1975946_1976141_+	hypothetical protein	NA	O64169	Bacillus_phage	100.0	7.6e-32
WP_009967463.1|1976191_1976392_+	hypothetical protein	NA	O64170	Bacillus_phage	100.0	2.1e-32
WP_156476656.1|1976466_1976616_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417955.1|1976634_1976991_+	hypothetical protein	NA	O64171	Bacillus_phage	45.9	4.2e-20
WP_014417956.1|1976987_1977383_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A1P8CX56	Bacillus_phage	84.0	2.8e-57
WP_014417957.1|1977345_1979445_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A1P8CX40	Bacillus_phage	61.6	0.0e+00
WP_041481780.1|1979428_1979767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041481781.1|1979830_1980826_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4JMU8	Bacillus_phage	81.5	1.4e-150
WP_014417959.1|1980822_1981065_+	thioredoxin family protein	NA	A0A1P8CX24	Bacillus_phage	73.4	1.3e-28
WP_041481782.1|1981057_1981306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417960.1|1981292_1981649_+|tRNA	peptidyl-tRNA hydrolase	tRNA	A0A1V0SFB5	Hokovirus	29.8	3.7e-08
WP_014417961.1|1981701_1982130_+	dUTP diphosphatase	NA	A0A1P8CX51	Bacillus_phage	90.1	4.4e-72
WP_014417962.1|1982325_1982625_+	hypothetical protein	NA	O64180	Bacillus_phage	56.3	2.3e-19
WP_014417963.1|1983396_1984044_-	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_014417964.1|1984094_1984946_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	39.0	3.2e-50
WP_014417965.1|1984945_1985452_+	dihydrofolate reductase	NA	A0A0H3UYW4	Geobacillus_virus	40.4	6.2e-33
WP_014417966.1|1985579_1985945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417967.1|1986003_1986372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417968.1|1986589_1986967_+	hypothetical protein	NA	R4JDR8	Bacillus_phage	88.0	9.6e-63
WP_041481808.1|1987592_1987952_+	hypothetical protein	NA	R4JGJ3	Bacillus_phage	47.2	4.6e-22
WP_014417970.1|1988082_1988424_+	hypothetical protein	NA	Q9ZXC6	Bacillus_phage	72.6	3.3e-22
WP_014417971.1|1988757_1989702_+	HNH endonuclease	NA	A0A1B1P765	Bacillus_phage	41.8	3.4e-16
WP_014417972.1|1989703_1990531_+	metallophosphoesterase	NA	O64184	Bacillus_phage	91.3	2.5e-156
WP_014417973.1|1990540_1990762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481809.1|1990832_1991168_+	hypothetical protein	NA	F8WPK8	Bacillus_phage	64.2	5.5e-38
WP_014417974.1|1991209_1991449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157829253.1|1991611_1991788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157829254.1|1991831_1991993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481810.1|1992285_1992726_+	hypothetical protein	NA	A0A1P8CX53	Bacillus_phage	72.3	9.5e-38
WP_014417976.1|1992706_1993255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014417977.1|1993255_1993429_+	hypothetical protein	NA	O64190	Bacillus_phage	91.2	5.4e-21
WP_014417978.1|1993425_1993857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014470254.1|1994087_1994327_-	helix-turn-helix transcriptional regulator	NA	A0A1P8CX60	Bacillus_phage	65.8	6.5e-25
WP_014417980.1|1994424_1994961_+	Holliday junction resolvase RecU	NA	O64195	Bacillus_phage	92.6	2.0e-90
WP_014417981.1|1994975_1995245_+	hypothetical protein	NA	S5MC08	Brevibacillus_phage	55.8	7.4e-25
>prophage 9
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	2323405	2373860	4238624	head,capsid,terminase,protease,plate,tail,coat,integrase,holin,portal	Bacillus_phage(41.03%)	61	2340109:2340127	2379445:2379463
WP_158319026.1|2323405_2324839_-	glycosyltransferase	NA	A0A1V0SGA9	Hokovirus	30.0	9.1e-05
WP_014418180.1|2325280_2325877_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_040221738.1|2326085_2326613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014418181.1|2326807_2327971_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1P8CWN6	Bacillus_phage	49.1	1.2e-68
WP_040221739.1|2328016_2328439_-|holin	phage holin family protein	holin	D6R405	Bacillus_phage	87.2	3.6e-58
WP_014418183.1|2328488_2328674_-	XkdX family protein	NA	Q9ZXD9	Bacillus_phage	72.1	5.8e-21
WP_040221740.1|2328673_2329036_-	hypothetical protein	NA	Q9ZXE0	Bacillus_phage	56.3	4.6e-30
WP_014418184.1|2329032_2330856_-|plate	phage baseplate upper protein	plate	D6R402	Bacillus_phage	35.7	1.1e-79
WP_014418185.1|2330870_2333435_-	peptidase G2	NA	D6R401	Bacillus_phage	79.8	0.0e+00
WP_014418186.1|2333488_2335192_-|tail	phage tail protein	tail	D6R400	Bacillus_phage	57.6	2.3e-180
WP_014418187.1|2335206_2336046_-|tail	phage tail family protein	tail	D6R3Z9	Bacillus_phage	58.3	1.2e-92
WP_014418188.1|2336039_2340527_-|tail	phage tail tape measure protein	tail	A0A1Q1PVX7	Staphylococcus_phage	32.4	7.9e-63
2340109:2340127	attL	TTTTTAAAAACAGAAAAAA	NA	NA	NA	NA
WP_014418189.1|2340724_2341102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418190.1|2341167_2341776_-|tail	tail protein	tail	A0A2H4J8F3	uncultured_Caudovirales_phage	35.5	3.7e-24
WP_014418191.1|2341790_2342174_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_014418192.1|2342170_2342569_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_014418193.1|2342565_2342883_-|head	phage head closure protein	head	A0A2H4JCB1	uncultured_Caudovirales_phage	38.2	3.4e-13
WP_014418194.1|2342872_2343175_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0S2GLH6	Bacillus_phage	45.2	3.6e-12
WP_014418195.1|2343192_2343672_-	collagen-like protein	NA	D6R3Z0	Bacillus_phage	60.8	1.6e-09
WP_014418196.1|2343694_2344987_-|capsid	phage major capsid protein	capsid	A0A0A7RTL2	Clostridium_phage	48.7	1.8e-92
WP_014418197.1|2345025_2345652_-|head,protease	HK97 family phage prohead protease	head,protease	Q9ZXF7	Bacillus_phage	77.7	2.5e-84
WP_014418198.1|2345614_2346895_-|portal	phage portal protein	portal	D6R3Y6	Bacillus_phage	62.8	2.1e-154
WP_014418199.1|2346899_2347070_-	hypothetical protein	NA	Q9ZXF9	Bacillus_phage	61.8	7.9e-09
WP_014418200.1|2347083_2348793_-|terminase	terminase large subunit	terminase	A0A0S2GLF0	Bacillus_phage	63.0	6.4e-207
WP_014418201.1|2348789_2349305_-|terminase	phage terminase small subunit P27 family	terminase	A6M947	Geobacillus_virus	42.3	7.0e-32
WP_014418202.1|2349531_2349897_-	HNH endonuclease	NA	A0A1U7Q1S7	Geobacillus_virus	55.0	1.0e-29
WP_014418203.1|2350199_2351078_-	hypothetical protein	NA	A0A0S2GLF7	Bacillus_phage	25.3	1.4e-27
WP_014721396.1|2351147_2351366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418205.1|2351502_2351715_-	helix-turn-helix domain-containing protein	NA	A0A1Z1LZP5	Bacillus_phage	51.4	5.6e-12
WP_014304494.1|2352013_2352151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418206.1|2352255_2352771_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1L2JY33	Aeribacillus_phage	43.2	3.0e-27
WP_014418207.1|2353042_2354245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418208.1|2354246_2354621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041481787.1|2354857_2355115_-	hypothetical protein	NA	A0A2H4JA61	uncultured_Caudovirales_phage	42.7	1.7e-07
WP_014418210.1|2355150_2355354_-	XtrA/YqaO family protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	70.3	2.8e-21
WP_014721399.1|2355436_2355601_-	hypothetical protein	NA	A0A2H4J4N7	uncultured_Caudovirales_phage	62.0	3.7e-11
WP_041481788.1|2355651_2356080_-	RusA family crossover junction endodeoxyribonuclease	NA	S6B1L9	Thermus_phage	65.7	3.0e-44
WP_173363128.1|2356175_2356319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145972920.1|2356315_2357233_-	ATP-binding protein	NA	A6XMI1	Bacillus_virus	50.2	1.8e-54
WP_014418213.1|2357147_2357849_-	DnaD domain protein	NA	A0A2H4J6G9	uncultured_Caudovirales_phage	31.1	3.4e-05
WP_014721402.1|2358046_2358784_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A2P1JU03	Anoxybacillus_phage	42.4	2.2e-42
WP_014418215.1|2358803_2359724_-	hypothetical protein	NA	A0A0A7S0A9	Clostridium_phage	64.0	3.5e-90
WP_032859263.1|2359720_2359909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014721404.1|2360010_2360208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418217.1|2360204_2360462_-	hypothetical protein	NA	A0A2H4J4M9	uncultured_Caudovirales_phage	39.8	1.1e-09
WP_014418218.1|2360458_2361031_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J884	uncultured_Caudovirales_phage	56.9	4.7e-61
WP_014418219.1|2361088_2361817_-	phage regulatory protein/antirepressor Ant	NA	A0A2H4J4N4	uncultured_Caudovirales_phage	68.7	6.1e-90
WP_032863594.1|2361813_2362128_-	hypothetical protein	NA	A0A2H4JDL0	uncultured_Caudovirales_phage	49.3	1.9e-11
WP_025852635.1|2362140_2362359_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014418220.1|2362512_2362890_+	helix-turn-helix domain-containing protein	NA	A0A0A7RTK4	Clostridium_phage	45.3	1.1e-10
WP_014418221.1|2363261_2364458_+|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	43.9	2.5e-80
WP_014418222.1|2364501_2365806_-	purine permease	NA	NA	NA	NA	NA
WP_014418223.1|2365802_2366387_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_014418224.1|2366719_2368222_-	carboxypeptidase M32	NA	NA	NA	NA	NA
WP_014721409.1|2368333_2370253_-	ATP-dependent DNA helicase	NA	A0A2P1N0K5	Streptomyces_phage	21.8	1.8e-11
WP_014418226.1|2370356_2370548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003153548.1|2370714_2370867_+	YpzG family protein	NA	NA	NA	NA	NA
WP_014418227.1|2370907_2372074_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_003153541.1|2372607_2372907_-	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_014418228.1|2372986_2373535_-	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_003153539.1|2373623_2373860_-|coat	spore coat protein	coat	NA	NA	NA	NA
2379445:2379463	attR	TTTTTAAAAACAGAAAAAA	NA	NA	NA	NA
>prophage 10
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	2465449	2471702	4238624		Staphylococcus_phage(66.67%)	9	NA	NA
WP_007409428.1|2465449_2466043_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	36.6	2.6e-14
WP_014418279.1|2466032_2466788_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.7	1.7e-10
WP_003153376.1|2466995_2467085_+	YjcZ family sporulation protein	NA	NA	NA	NA	NA
WP_014418280.1|2467172_2467694_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_003153373.1|2467759_2468134_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA	NA
WP_003153372.1|2468250_2468715_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	59.3	1.2e-43
WP_014418281.1|2468747_2469944_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.7	2.1e-116
WP_007409425.1|2469958_2470606_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	44.3	1.5e-39
WP_014418282.1|2470586_2471702_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.6	4.4e-55
>prophage 11
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	2781821	2862023	4238624	head,capsid,terminase,protease,plate,tail,integrase,holin,portal,tRNA	Bacillus_phage(51.16%)	96	2774027:2774044	2849792:2849809
2774027:2774044	attL	CAGGCGTGACGAAAGACC	NA	NA	NA	NA
WP_014418453.1|2781821_2782304_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_007408231.1|2782371_2783256_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014418454.1|2783380_2784589_+	MFS transporter	NA	NA	NA	NA	NA
WP_014418455.1|2784738_2787900_-	bifunctional cytochrome P450/NADPH--P450 reductase	NA	V5UQK0	Mycobacterium_phage	36.9	4.1e-74
WP_014418456.1|2787927_2788494_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007408228.1|2788703_2789243_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_007408227.1|2789414_2789570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003152787.1|2789742_2789883_-	YrzI family small protein	NA	NA	NA	NA	NA
WP_007408225.1|2790272_2791073_-	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
WP_007408224.1|2791340_2791709_-	DUF2294 domain-containing protein	NA	NA	NA	NA	NA
WP_087920802.1|2792015_2794958_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_007612765.1|2794975_2795467_+	DUF1641 domain-containing protein	NA	NA	NA	NA	NA
WP_012118061.1|2795505_2795736_-	YrhC family protein	NA	NA	NA	NA	NA
WP_014418459.1|2796962_2797886_-	cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	43.1	1.4e-59
WP_014418460.1|2797933_2798629_-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_014418461.1|2798649_2799291_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003152771.1|2799474_2799678_+	YrzA family protein	NA	NA	NA	NA	NA
WP_014418462.1|2799718_2800435_-	YrrS family protein	NA	NA	NA	NA	NA
WP_014418463.1|2800498_2802253_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_003152766.1|2802306_2802780_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_125123017.1|2803464_2804079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041481790.1|2804065_2804497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418466.1|2804943_2805576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041481791.1|2805608_2805818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014418467.1|2805993_2806653_+	hypothetical protein	NA	Q9AZW5	Lactococcus_phage	31.9	7.9e-12
WP_014418468.1|2806759_2807773_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1J0MS59	Bacillus_phage	95.5	3.5e-184
WP_015387952.1|2807821_2808244_-|holin	holin family protein	holin	D6R405	Bacillus_phage	98.5	3.3e-64
WP_014305127.1|2808295_2808484_-	XkdX family protein	NA	Q9ZXD9	Bacillus_phage	96.8	4.1e-30
WP_014418470.1|2808480_2808843_-	hypothetical protein	NA	Q9ZXE0	Bacillus_phage	90.8	2.1e-54
WP_014418471.1|2808839_2810072_-|plate	BppU family phage baseplate upper protein	plate	D6R402	Bacillus_phage	87.1	2.9e-148
WP_041481792.1|2810084_2812649_-	peptidase G2	NA	D6R401	Bacillus_phage	57.5	5.4e-290
WP_014418473.1|2812699_2814403_-|tail	phage tail protein	tail	D6R400	Bacillus_phage	56.9	1.0e-180
WP_014418474.1|2814417_2815257_-|tail	phage tail family protein	tail	D6R3Z9	Bacillus_phage	58.6	8.0e-94
WP_014418475.1|2815250_2819738_-|tail	phage tail tape measure protein	tail	A0A1Q1PVX7	Staphylococcus_phage	42.5	8.5e-65
WP_014418476.1|2819943_2820312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418477.1|2820370_2820985_-|tail	tail protein	tail	A0A2H4J8F3	uncultured_Caudovirales_phage	33.9	1.1e-23
WP_014418478.1|2820999_2821383_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_014418479.1|2821379_2821778_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_014418480.1|2821774_2822092_-|head	phage head closure protein	head	A0A2H4JCB1	uncultured_Caudovirales_phage	36.3	1.1e-11
WP_014418481.1|2822081_2822384_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0S2GLH6	Bacillus_phage	41.5	1.2e-10
WP_014418482.1|2822401_2822827_-	hypothetical protein	NA	D6R3Z0	Bacillus_phage	52.4	1.0e-12
WP_014418483.1|2822854_2824147_-|capsid	phage major capsid protein	capsid	A0A0A7RTL2	Clostridium_phage	47.4	9.2e-89
WP_014418484.1|2824184_2824811_-|head,protease	HK97 family phage prohead protease	head,protease	Q9ZXF7	Bacillus_phage	79.1	8.7e-85
WP_014418485.1|2824773_2826054_-|portal	phage portal protein	portal	D6R3Y6	Bacillus_phage	63.1	2.9e-151
WP_014418487.1|2826242_2827952_-|terminase	terminase large subunit	terminase	A0A0S2GLF0	Bacillus_phage	62.6	2.1e-205
WP_014418488.1|2827948_2828464_-|terminase	phage terminase small subunit P27 family	terminase	A6M947	Geobacillus_virus	44.6	9.8e-34
WP_014418490.1|2828691_2829057_-	HNH endonuclease	NA	A0A1U7Q1S7	Geobacillus_virus	55.0	2.7e-30
WP_110085444.1|2829134_2829410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418493.1|2829970_2830153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418494.1|2830628_2831171_-|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	60.0	1.1e-54
WP_041481813.1|2831167_2831620_-	ArpU family transcriptional regulator	NA	S6AVV9	Thermus_phage	57.4	2.6e-38
WP_164463351.1|2831674_2831851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418496.1|2831955_2832390_-	hypothetical protein	NA	A0A2H4J8A0	uncultured_Caudovirales_phage	69.3	7.7e-48
WP_014418497.1|2832392_2832638_-	hypothetical protein	NA	A0A217ERB6	Bacillus_phage	46.2	1.2e-10
WP_014418498.1|2832634_2832943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418499.1|2833029_2833248_-	hypothetical protein	NA	A0A0A0RMF3	Bacillus_phage	41.4	9.2e-10
WP_014418500.1|2833414_2833786_-	hypothetical protein	NA	H6WU17	Pseudomonas_phage	65.1	1.6e-06
WP_014418501.1|2833785_2834451_-	dUTP diphosphatase	NA	R9TQ23	Paenibacillus_phage	47.1	2.3e-35
WP_014721577.1|2834464_2834602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014721578.1|2834603_2834924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418503.1|2835011_2835272_-	hypothetical protein	NA	F8WQ54	Bacillus_phage	42.0	1.6e-05
WP_014721581.1|2835268_2835484_-	hypothetical protein	NA	A0A0A7AR03	Bacillus_phage	60.3	5.5e-15
WP_014721582.1|2835480_2835711_-	hypothetical protein	NA	J9PL10	Bacillus_phage	44.2	2.7e-12
WP_014721584.1|2836225_2836429_-	XtrA/YqaO family protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	56.9	9.8e-14
WP_014721585.1|2836508_2836664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014721586.1|2836676_2836817_-	BH0509 family protein	NA	NA	NA	NA	NA
WP_014418506.1|2836924_2837473_-	hypothetical protein	NA	A0A0K2CYJ0	Paenibacillus_phage	36.5	2.0e-05
WP_014721588.1|2837469_2837628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024085441.1|2837624_2837774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041481814.1|2837788_2838619_-	ATP-binding protein	NA	A0A0U3U1U1	Bacillus_phage	35.5	3.2e-34
WP_014418508.1|2838602_2839481_-	conserved phage C-terminal domain-containing protein	NA	A0A0U3TZZ4	Bacillus_phage	48.6	1.4e-61
WP_041481795.1|2839494_2839812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041481796.1|2839852_2840044_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014721592.1|2840347_2840602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014418511.1|2840973_2842155_-	helix-turn-helix transcriptional regulator	NA	A0A288WGA2	Bacillus_phage	25.6	1.3e-09
WP_014418512.1|2842461_2843622_+|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	36.6	1.3e-65
WP_014418513.1|2843686_2844319_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.2	4.1e-34
WP_014418514.1|2844325_2845594_-	U32 family peptidase	NA	Q6DW11	Phage_TP	31.2	2.1e-37
WP_007408214.1|2845611_2846541_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_014418515.1|2846547_2847201_-	O-methyltransferase	NA	NA	NA	NA	NA
WP_014418516.1|2847352_2848444_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_003152751.1|2848554_2848836_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_003152750.1|2848848_2849265_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_003152749.1|2849273_2849540_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_014418517.1|2849624_2852261_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	34.1	4.1e-67
2849792:2849809	attR	GGTCTTTCGTCACGCCTG	NA	NA	NA	NA
WP_014418518.1|2852592_2853654_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_014418519.1|2853874_2854603_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.3	2.5e-35
WP_007408208.1|2854623_2855451_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_014418520.1|2855507_2856158_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014418521.1|2856176_2856833_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003152741.1|2856868_2857000_-	YrzQ family protein	NA	NA	NA	NA	NA
WP_003152738.1|2857021_2857213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007408205.1|2857225_2857684_-	PRC-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_014418522.1|2857802_2860181_-	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.6	2.6e-81
WP_088461189.1|2860199_2860820_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_012118077.1|2860907_2862023_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 12
NC_017912	Bacillus amyloliquefaciens Y2, complete sequence	4238624	3915316	3923094	4238624		Bacillus_phage(33.33%)	9	NA	NA
WP_014419157.1|3915316_3916252_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.9	9.8e-24
WP_014419158.1|3916253_3916952_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.8	3.2e-35
WP_014419159.1|3917143_3918010_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_014419160.1|3918030_3918735_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_025649399.1|3918800_3919727_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	45.9	1.1e-43
WP_003150986.1|3920085_3920541_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	NA	NA	NA	NA
WP_014419162.1|3920537_3921386_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.3	5.4e-37
WP_014419163.1|3921406_3922354_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	42.6	1.3e-68
WP_014419164.1|3922356_3923094_-	NTP transferase domain-containing protein	NA	G3MA50	Bacillus_virus	42.7	5.0e-47
