assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000270005.1_ASM27000v1	NC_017368	Helicobacter pylori F16, complete genome	1	138261-138358	1	CRISPRCasFinder	no		cas3,cas14j,c2c9_V-U4,DEDDh	Orphan	CTTTCTTGTTCTAACTCTATCTCACTCTTATTTGC	35	1	1	138296-138323	NC_017368.1_138170-138197	NA	1	1	Orphan	cas3,cas14j,c2c9_V-U4,DEDDh	NA|99aa|up_4|NC_017368.1_130264_130561_+,NA|290aa|down_6|NC_017368.1_146985_147855_+	NA|306aa|up_9|NC_017368.1_124347_125265_-	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|621aa|up_8|NC_017368.1_126087_127950_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|192aa|up_7|NC_017368.1_127980_128556_-	PRK14149, PRK14149, heat shock protein GrpE; Provisional	NA|277aa|up_6|NC_017368.1_128555_129386_-	PRK03911, PRK03911, HrcA family transcriptional regulator	NA|213aa|up_5|NC_017368.1_129605_130244_+	PRK05834, PRK05834, hypothetical protein; Provisional	NA|99aa|up_4|NC_017368.1_130264_130561_+	NA	NA|628aa|up_3|NC_017368.1_130585_132469_-	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown]	NA|515aa|up_2|NC_017368.1_132531_134076_-	PRK13588, PRK13588, flagellin B; Provisional	NA|737aa|up_1|NC_017368.1_134241_136452_+	PRK05582, PRK05582, type I DNA topoisomerase	NA|312aa|up_0|NC_017368.1_136444_137380_+	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion]	NA|813aa|down_0|NC_017368.1_138861_141300_-	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|613aa|down_1|NC_017368.1_141657_143496_+	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|204aa|down_2|NC_017368.1_143492_144104_+	TIGR00168, Translation_initiation_factor_IF-3, translation initiation factor IF-3	NA|65aa|down_3|NC_017368.1_144084_144279_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|117aa|down_4|NC_017368.1_144373_144724_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|287aa|down_5|NC_017368.1_144923_145784_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|290aa|down_6|NC_017368.1_146985_147855_+	NA	NA|456aa|down_7|NC_017368.1_148704_150072_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|414aa|down_8|NC_017368.1_150071_151313_-	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|450aa|down_9|NC_017368.1_151493_152843_+	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family
GCF_000270005.1_ASM27000v1	NC_017368	Helicobacter pylori F16, complete genome	2	347256-347365	2	CRISPRCasFinder	no		cas3,cas14j,c2c9_V-U4,DEDDh	Orphan	GAAAGGCTCTCTAGCGTTACTGAAGA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,c2c9_V-U4,DEDDh	NA|113aa|up_0|NC_017368.1_346537_346876_+,NA|64aa|down_0|NC_017368.1_347899_348091_+,NA|262aa|down_1|NC_017368.1_348804_349590_+,NA|368aa|down_2|NC_017368.1_349579_350683_+	NA|181aa|up_9|NC_017368.1_340040_340583_+	TIGR03585, PseH, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA|313aa|up_8|NC_017368.1_340515_341454_-	COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]	NA|261aa|up_7|NC_017368.1_341450_342233_-	PRK13980, PRK13980, NAD synthetase; Provisional	NA|331aa|up_6|NC_017368.1_342481_343474_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|269aa|up_5|NC_017368.1_343497_344304_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|78aa|up_4|NC_017368.1_344300_344534_+	TIGR01215, Cell_division_topological_specificity_factor, cell division topological specificity factor MinE	NA|267aa|up_3|NC_017368.1_344545_345346_+	TIGR00732, Protein_smf, DNA protecting protein DprA	NA|135aa|up_2|NC_017368.1_345342_345747_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|157aa|up_1|NC_017368.1_345879_346350_+	sd00010, SLR, Sel1-like repeat	NA|113aa|up_0|NC_017368.1_346537_346876_+	NA	NA|64aa|down_0|NC_017368.1_347899_348091_+	NA	NA|262aa|down_1|NC_017368.1_348804_349590_+	NA	NA|368aa|down_2|NC_017368.1_349579_350683_+	NA	NA|294aa|down_3|NC_017368.1_350726_351608_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|517aa|down_4|NC_017368.1_351607_353158_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|539aa|down_5|NC_017368.1_353168_354785_-	PRK05380, pyrG, CTP synthetase; Validated	NA|223aa|down_6|NC_017368.1_355050_355719_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|568aa|down_7|NC_017368.1_355762_357466_+	TIGR00206, Flagellar_M-ring_protein, flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)	NA|344aa|down_8|NC_017368.1_357484_358516_+	TIGR00207, Flagellar_motor_switch_protein_FliG, flagellar motor switch protein FliG	NA|259aa|down_9|NC_017368.1_358502_359279_+	PRK06669, fliH, flagellar assembly protein H; Validated
GCF_000270005.1_ASM27000v1	NC_017368	Helicobacter pylori F16, complete genome	3	951395-951599	1,1	PILER-CR,CRT	no		cas3,cas14j,c2c9_V-U4,DEDDh	Orphan	TTCAATCAAGGCACTTACAACTTTAATA,TTCAATCAAGGCACTTACAACTTTA	28,25	0	0	NA	NA	I-B:I-B	3,3	3	Orphan	cas3,cas14j,c2c9_V-U4,DEDDh	NA,NA|220aa|down_8|NC_017368.1_964267_964927_+	NA|384aa|up_9|NC_017368.1_932497_933649_+	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|677aa|up_8|NC_017368.1_933652_935683_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|513aa|up_7|NC_017368.1_936829_938368_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|531aa|up_6|NC_017368.1_938389_939982_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|515aa|up_5|NC_017368.1_940524_942069_-	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|813aa|up_4|NC_017368.1_942307_944746_-	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|144aa|up_3|NC_017368.1_944919_945351_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|1086aa|up_2|NC_017368.1_945355_948613_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|231aa|up_1|NC_017368.1_948707_949400_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|332aa|up_0|NC_017368.1_949543_950539_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|368aa|down_0|NC_017368.1_957850_958954_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|69aa|down_1|NC_017368.1_959006_959213_-	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|194aa|down_2|NC_017368.1_959358_959940_+	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|382aa|down_3|NC_017368.1_959936_961082_+	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|317aa|down_4|NC_017368.1_961050_962001_+	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|181aa|down_5|NC_017368.1_962001_962544_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|304aa|down_6|NC_017368.1_962559_963471_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|268aa|down_7|NC_017368.1_963467_964271_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|220aa|down_8|NC_017368.1_964267_964927_+	NA	NA|201aa|down_9|NC_017368.1_964930_965533_+	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]
