assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000270205.1_ASM27020v1	NC_015913	Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome	1	114769-114999	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	GTCGCACCTCACGCAGGTGCGTGGATTGAAAT,GTCGCACCTCACGCAGGTGCGTGGATTGAAAT,GTCGCACCTCACGCAGGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	3,3,3	3	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	NA|294aa|up_8|NC_015913.1_100737_101619_+,NA|196aa|up_0|NC_015913.1_113999_114587_+,NA|68aa|down_3|NC_015913.1_117965_118169_+	NA|301aa|up_9|NC_015913.1_99800_100703_+	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown]	NA|294aa|up_8|NC_015913.1_100737_101619_+	NA	NA|614aa|up_7|NC_015913.1_101731_103573_+	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing)	NA|1180aa|up_6|NC_015913.1_103673_107213_+	PRK06826, dnaE, DNA polymerase III DnaE; Reviewed	NA|320aa|up_5|NC_015913.1_107241_108201_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|474aa|up_4|NC_015913.1_108228_109650_+	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism]	NA|462aa|up_3|NC_015913.1_109831_111217_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|397aa|up_2|NC_015913.1_111269_112460_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|435aa|up_1|NC_015913.1_112694_113999_+	COG1106, COG1106, Predicted ATPases [General function prediction only]	NA|196aa|up_0|NC_015913.1_113999_114587_+	NA	NA|84aa|down_0|NC_015913.1_115046_115298_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|245aa|down_1|NC_015913.1_115640_116375_+	pfam12358, DUF3644, Protein of unknown function (DUF3644)	NA|238aa|down_2|NC_015913.1_117112_117826_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|68aa|down_3|NC_015913.1_117965_118169_+	NA	NA|72aa|down_4|NC_015913.1_118287_118503_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|64aa|down_5|NC_015913.1_118614_118806_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|207aa|down_6|NC_015913.1_118930_119551_+	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|73aa|down_7|NC_015913.1_119553_119772_-	pfam01381, HTH_3, Helix-turn-helix	NA|67aa|down_8|NC_015913.1_119889_120090_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|73aa|down_9|NC_015913.1_120144_120363_+	pfam12728, HTH_17, Helix-turn-helix domain
GCF_000270205.1_ASM27020v1	NC_015913	Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome	2	116771-117068	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	GTCGCACCTCACGCAGGTGCGTGGATTGAAATT,GTCGCACCTCACGCAGGTGCGTGGATTGAAATT,GTCGCACCTCACGCAGGTGCGTGGATTGAAATT	33,33,33	0	0	NA	NA	I-C:I-C:I-C	3,4,4	4	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	NA|196aa|up_2|NC_015913.1_113999_114587_+,NA|68aa|down_1|NC_015913.1_117965_118169_+,NA|60aa|down_8|NC_015913.1_120367_120547_+,NA|89aa|down_9|NC_015913.1_120632_120899_+	NA|614aa|up_9|NC_015913.1_101731_103573_+	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing)	NA|1180aa|up_8|NC_015913.1_103673_107213_+	PRK06826, dnaE, DNA polymerase III DnaE; Reviewed	NA|320aa|up_7|NC_015913.1_107241_108201_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|474aa|up_6|NC_015913.1_108228_109650_+	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism]	NA|462aa|up_5|NC_015913.1_109831_111217_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|397aa|up_4|NC_015913.1_111269_112460_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|435aa|up_3|NC_015913.1_112694_113999_+	COG1106, COG1106, Predicted ATPases [General function prediction only]	NA|196aa|up_2|NC_015913.1_113999_114587_+	NA	NA|84aa|up_1|NC_015913.1_115046_115298_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|245aa|up_0|NC_015913.1_115640_116375_+	pfam12358, DUF3644, Protein of unknown function (DUF3644)	NA|238aa|down_0|NC_015913.1_117112_117826_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|68aa|down_1|NC_015913.1_117965_118169_+	NA	NA|72aa|down_2|NC_015913.1_118287_118503_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|64aa|down_3|NC_015913.1_118614_118806_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|207aa|down_4|NC_015913.1_118930_119551_+	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|73aa|down_5|NC_015913.1_119553_119772_-	pfam01381, HTH_3, Helix-turn-helix	NA|67aa|down_6|NC_015913.1_119889_120090_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|73aa|down_7|NC_015913.1_120144_120363_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|60aa|down_8|NC_015913.1_120367_120547_+	NA	NA|89aa|down_9|NC_015913.1_120632_120899_+	NA
GCF_000270205.1_ASM27020v1	NC_015913	Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome	3	745286-746183	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Type I-U,Type I-C, Type I-U?	GTCGCACCTCACGCAGGTGCGTGGATTGAAAT,GTCGCACCTCACGCAGGTGCGTGGATTGAAAT,GTCGCACCTCACGCAGGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	12,13,13	13	TypeI-U,TypeI-C,TypeI-U?	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	NA,NA|142aa|down_4|NC_015913.1_752021_752447_-,NA|202aa|down_6|NC_015913.1_753516_754122_+,NA|114aa|down_7|NC_015913.1_754160_754502_+	NA|313aa|up_9|NC_015913.1_733545_734484_-	PRK09512, rbsC, ribose ABC transporter permease protein; Reviewed	NA|132aa|up_8|NC_015913.1_736027_736423_-	PRK11797, PRK11797, D-ribose pyranase; Provisional	NA|310aa|up_7|NC_015913.1_736428_737358_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	cas3|744aa|up_6|NC_015913.1_737500_739732_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|227aa|up_5|NC_015913.1_739749_740430_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|612aa|up_4|NC_015913.1_740426_742262_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|288aa|up_3|NC_015913.1_742264_743128_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|214aa|up_2|NC_015913.1_743141_743783_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|343aa|up_1|NC_015913.1_743783_744812_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_015913.1_744824_745115_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|142aa|down_0|NC_015913.1_746883_747309_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|640aa|down_1|NC_015913.1_747806_749726_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|472aa|down_2|NC_015913.1_749751_751167_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|245aa|down_3|NC_015913.1_751228_751963_-	pfam07786, DUF1624, Protein of unknown function (DUF1624)	NA|142aa|down_4|NC_015913.1_752021_752447_-	NA	NA|111aa|down_5|NC_015913.1_752706_753039_+	pfam05987, DUF898, Bacterial protein of unknown function (DUF898)	NA|202aa|down_6|NC_015913.1_753516_754122_+	NA	NA|114aa|down_7|NC_015913.1_754160_754502_+	NA	NA|185aa|down_8|NC_015913.1_754589_755144_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|140aa|down_9|NC_015913.1_755292_755712_+	pfam11070, DUF2871, Protein of unknown function (DUF2871)
