bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_017353	Staphylococcus lugdunensis N920143, complete genome	2.1|395652|32|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	93.750	32	2	0	1	32	253766	253735	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	2.27e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	253735-253766	GGGGCCCCAGCAAAGAGAATTTCGAGAAGAAA	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	2.1|395652|32|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	93.750	32	2	0	1	32	253823	253792	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	2.27e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	253792-253823	GGGGCCCCAGCAAAGAGAATTTCGAGAAGAAA	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	2.1|395652|32|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	93.750	32	2	0	1	32	467528	467497	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	2.27e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	467497-467528	GGGGCCCCAACAAAGAGAATTTCGACAAGAAA	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	2.1|395652|32|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	93.750	32	2	0	1	32	1583243	1583274	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	2.27e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	1583243-1583274	TTTCTTCTCGAAATTCTCTCTGTTGGGGCCCC	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	2.1|395652|32|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	93.750	32	2	0	1	32	2464269	2464238	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	2.27e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	2464238-2464269	GGGGCCCCAACAGAGAGAATTTCGAGAAGAAA	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	5.1|698123|17|NC_017353|PILER-CR	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	17	1	0	1	17	1015352	1015368	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	0.24	25.4	1.0	TTGGTGAATTTCTTATC	1015352-1015368	TTGGTGAATTTCTTTTC	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	5.1|698123|17|NC_017353|PILER-CR	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	17	1	0	1	17	2497619	2497635	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	0.24	25.4	1.0	TTGGTGAATTTCTTATC	2497619-2497635	TTGGTGAATTTCTTTTC	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	5.1|698123|17|NC_017353|PILER-CR	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	17	1	0	1	17	2497676	2497692	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	0.24	25.4	1.0	TTGGTGAATTTCTTATC	2497676-2497692	TTGGTGAATTTCTTTTC	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	5.1|698123|17|NC_017353|PILER-CR	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	17	1	0	1	17	2232446	2232430	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	0.24	25.4	1.0	TTGGTGAATTTCTTATC	2232430-2232446	GACAAGAAATTCACCAA	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	6.1|750817|27|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	100.000	27	0	0	1	27	178741	178767	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	4.54e-07	44.4	1.0	AATGCAACAAGCATTTCCACGAACAAC	178741-178767	AATGCAACAAGCATTTCCACGAACAAC	0
NC_017353	Staphylococcus lugdunensis N920143, complete genome	6.1|750817|27|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	96.296	27	1	0	1	27	793638	793664	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	4.08e-06	41.2	1.0	AATGCAACAAGCATTTCCACGAACAAC	793638-793664	AATGCAACAAGCATTTCCACGGACAAC	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	6.1|750817|27|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	96.296	27	1	0	1	27	793695	793721	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	4.08e-06	41.2	1.0	AATGCAACAAGCATTTCCACGAACAAC	793695-793721	AATGCAACAAGCATTTCCACGGACAAC	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	7.1|786766|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	97.059	34	1	0	1	34	2178580	2178613	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.74e-09	52.3	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	2178580-2178613	GGCCCCAACAGAGAGAAATACGAAAAGTATTTCG	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	7.1|786766|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	34	2	0	1	34	43077	43044	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.36e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	43044-43077	CGAAATGCTTTTCGCATTTCTCTTTGTTGGGGCC	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	7.1|786766|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	34	2	0	1	34	1103821	1103788	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.36e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	1103788-1103821	CGAAATGCTTTTCGAATTTCTCTTTGTTGGGGCC	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	7.1|786766|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	34	2	0	1	34	1263074	1263107	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.36e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	1263074-1263107	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	7.1|786766|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	94.118	34	2	0	1	34	1852104	1852137	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.36e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	1852104-1852137	GGCCTCAACAGAGAGAAATACGAAAAGTATTTCG	2
NC_017353	Staphylococcus lugdunensis N920143, complete genome	11.1|2201801|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	100.000	34	0	0	1	34	43077	43044	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	4.15e-10	55.5	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	43044-43077	CGAAATGCTTTTCGCATTTCTCTTTGTTGGGGCC	0
NC_017353	Staphylococcus lugdunensis N920143, complete genome	11.1|2201801|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	100.000	34	0	0	1	34	1263074	1263107	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	4.15e-10	55.5	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	1263074-1263107	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	0
NC_017353	Staphylococcus lugdunensis N920143, complete genome	11.1|2201801|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	97.059	34	1	0	1	34	1085333	1085366	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.74e-09	52.3	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	1085333-1085366	GGCCCCAACAAAAAGAAATGCGAAAAGCATTTCG	1
NC_017353	Staphylococcus lugdunensis N920143, complete genome	11.1|2201801|34|NC_017353|CRISPRCasFinder	NC_017353.1	Staphylococcus lugdunensis N920143, complete genome	97.059	34	1	0	1	34	1103821	1103788	63455-63777|395626-395709|577536-577617|609844-609924|698066-698214|750787-750873|786743-786822|1307010-1307100|1871267-1871353|1964069-1964163|2201778-2201857	3.74e-09	52.3	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	1103788-1103821	CGAAATGCTTTTCGAATTTCTCTTTGTTGGGGCC	1
