The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	1140750	1238446	4883715	protease,tail,terminase,tRNA,holin,portal,transposase	Enterobacteria_phage(28.3%)	89	NA	NA
WP_000537359.1|1140750_1141926_-	DUF3596 domain-containing protein	NA	I6PDJ1	Cronobacter_phage	67.4	1.4e-147
WP_001061331.1|1142131_1142701_-	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	81.3	3.7e-90
WP_000210516.1|1142702_1143143_-	hypothetical protein	NA	A0A088CE95	Shigella_phage	40.3	3.1e-12
WP_000840609.1|1143146_1143620_-	class I SAM-dependent methyltransferase	NA	H9C170	Pectobacterium_phage	78.1	1.1e-66
WP_000125081.1|1143619_1143934_-	hypothetical protein	NA	I6RSM9	Salmonella_phage	85.0	3.4e-21
WP_001253786.1|1143930_1144107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000120457.1|1144094_1144634_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	81.0	9.5e-80
WP_000845984.1|1145078_1145738_-	helix-turn-helix domain-containing protein	NA	H9C160	Pectobacterium_phage	63.1	2.5e-74
WP_000278289.1|1145830_1146034_+	Cro/Cl family transcriptional regulator	NA	H9C161	Pectobacterium_phage	67.8	2.1e-16
WP_000526197.1|1146056_1146608_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	67.2	6.7e-65
WP_024135506.1|1146780_1146960_+	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	73.1	2.3e-14
WP_000104991.1|1146949_1147807_+	conserved phage C-terminal domain-containing protein	NA	A0A1C9IHW0	Salmonella_phage	87.2	3.1e-69
WP_000174329.1|1147803_1148685_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	77.7	8.4e-134
WP_001206910.1|1148677_1150612_+	DNA cytosine methyltransferase	NA	H9C171	Pectobacterium_phage	53.8	3.9e-200
WP_000780154.1|1150608_1151007_+	RusA family crossover junction endodeoxyribonuclease	NA	Q8HA93	Salmonella_phage	90.2	4.7e-60
WP_031607717.1|1151111_1151978_+	ORF6N domain-containing protein	NA	F1C5A3	Cronobacter_phage	45.9	3.5e-60
WP_000609697.1|1152977_1153547_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	54.4	1.5e-46
WP_000417508.1|1153737_1154313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001670091.1|1154499_1154940_+|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	9.6e-14
WP_001283171.1|1155101_1155488_+|holin	phage holin family protein	holin	A0A192Y8P2	Salmonella_phage	93.0	1.0e-56
WP_000250463.1|1155474_1155756_+|holin	phage holin family protein	holin	A0A0U2SHD1	Escherichia_phage	50.0	3.1e-18
WP_001076629.1|1155755_1156370_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	80.9	1.9e-92
WP_000522146.1|1156377_1156647_+	hypothetical protein	NA	G8C7W1	Escherichia_phage	69.0	2.2e-21
WP_001100261.1|1156787_1157018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000120194.1|1157109_1157424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000761930.1|1157933_1158260_+	hypothetical protein	NA	M9NZE9	Enterobacteria_phage	80.0	2.9e-07
WP_001670093.1|1158443_1158932_+	DUF1441 family protein	NA	K7PJY2	Enterobacterial_phage	90.7	6.3e-75
WP_001118990.1|1158931_1161034_+|terminase	phage terminase large subunit family protein	terminase	K7PH52	Enterobacterial_phage	86.6	0.0e+00
WP_001082414.1|1161030_1161246_+	hypothetical protein	NA	A5LH28	Enterobacteria_phage	82.9	1.5e-25
WP_000054308.1|1161242_1162751_+|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	86.7	4.2e-258
WP_001125851.1|1162695_1164720_+|protease	Clp protease ClpP	protease	K7PKX4	Enterobacterial_phage	84.7	0.0e+00
WP_001097009.1|1164811_1165138_+	DUF2190 family protein	NA	K7PJY3	Enterobacterial_phage	60.2	2.4e-30
WP_000933904.1|1165130_1165406_+	DNA breaking-rejoining protein	NA	K7PH43	Enterobacteria_phage	61.5	2.6e-25
WP_000023109.1|1165418_1165973_+|tail	phage tail protein	tail	K7P7A8	Enterobacteria_phage	76.7	2.4e-62
WP_000797819.1|1165969_1166368_+|tail	tail protein	tail	K7PHM6	Enterobacterial_phage	62.0	6.8e-43
WP_000211139.1|1166375_1167113_+	Ig-like domain-containing protein	NA	O64327	Escherichia_phage	66.9	3.6e-90
WP_000479023.1|1167149_1167557_+|tail	phage minor tail protein G	tail	K7PM17	Enterobacteria_phage	57.9	3.8e-25
WP_071529728.1|1167565_1167886_+|tail	phage tail assembly protein T	tail	K7PHE1	Enterobacteria_phage	69.8	2.1e-34
WP_000079422.1|1167863_1170380_+|tail	phage tail tape measure protein	tail	K7PKR0	Enterobacteria_phage	69.2	1.0e-309
WP_000963482.1|1170383_1170731_+|tail	phage tail protein	tail	K7PJT2	Enterobacteria_phage	69.6	1.0e-39
WP_000056207.1|1170727_1171483_+|tail	phage minor tail protein L	tail	K7PGX3	Enterobacteria_phage	85.3	1.8e-129
WP_001249174.1|1171484_1172195_+	C40 family peptidase	NA	K7P6F5	Enterobacteria_phage	90.7	1.1e-136
WP_000709674.1|1172224_1172566_+	hypothetical protein	NA	K7PLP0	Enterobacteria_phage	92.9	5.6e-54
WP_000659016.1|1172609_1173215_+|tail	tail assembly protein	tail	K7PGY0	Enterobacteria_phage	97.0	1.4e-100
WP_001162257.1|1173268_1176472_+	host specificity protein J	NA	O64335	Escherichia_phage	88.7	0.0e+00
WP_001113924.1|1176473_1177433_+	hypothetical protein	NA	H6WRW5	Salmonella_phage	94.4	2.1e-175
WP_001272642.1|1177443_1178625_+	hypothetical protein	NA	S4TSP4	Salmonella_phage	68.9	1.2e-55
WP_000497432.1|1178848_1179091_-	DinI family protein	NA	Q6UAW0	Klebsiella_phage	76.6	3.4e-29
WP_000506722.1|1179411_1179801_+	hypothetical protein	NA	Q1MVE7	Enterobacteria_phage	71.3	3.9e-51
WP_001670096.1|1179988_1181194_-	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_000342601.1|1181922_1183086_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000196135.1|1183093_1185274_-	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_000533845.1|1185270_1186680_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_001237683.1|1186744_1198219_-	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_001518569.1|1198833_1199316_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_000242603.1|1199465_1199942_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001112990.1|1199931_1200222_+	RnfH family protein	NA	NA	NA	NA	NA
WP_001203445.1|1200387_1200726_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_000880965.1|1200874_1202536_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001059160.1|1202621_1203500_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_001518875.1|1203622_1204213_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001287924.1|1204247_1204853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_127172650.1|1204973_1206260_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001537507.1|1206279_1207071_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_000460052.1|1207236_1208598_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000256453.1|1208941_1209190_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000043266.1|1209208_1209757_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000469812.1|1209801_1210569_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000065257.1|1210609_1210957_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_001030985.1|1211113_1212334_-	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_001212379.1|1212326_1212845_-	YfiR family protein	NA	NA	NA	NA	NA
WP_001168062.1|1213284_1214355_+	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_000225185.1|1214364_1215486_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_000210990.1|1215543_1216452_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000200080.1|1216412_1217573_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_010989056.1|1217672_1217720_-	pheA operon leader peptide PheL	NA	NA	NA	NA	NA
WP_000178449.1|1217823_1218162_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_000197660.1|1218433_1219171_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000079130.1|1219302_1220283_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000992632.1|1220279_1221011_+	polyphenol oxidase	NA	NA	NA	NA	NA
WP_001235092.1|1221140_1223714_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
WP_000985653.1|1229623_1230079_+	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	50.0	3.0e-34
WP_000807810.1|1230182_1231484_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.4	9.1e-44
WP_001264473.1|1231480_1231804_-	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000949286.1|1231848_1233204_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000082639.1|1233318_1235979_-	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000183642.1|1236032_1236713_-|tRNA	tRNA-uridine aminocarboxypropyltransferase	tRNA	NA	NA	NA	NA
WP_001098732.1|1236785_1237205_-	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
WP_000997374.1|1237408_1238446_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	1243085	1296015	4883715	protease,tail,terminase,head,lysis,tRNA,holin,integrase,portal,transposase	Salmonella_phage(37.84%)	53	1237418:1237432	1251062:1251076
1237418:1237432	attL	GAATTAAAAAACAAA	NA	NA	NA	NA
WP_000083347.1|1243085_1243823_+|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000989186.1|1243807_1245430_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_014344135.1|1245693_1245858_+	rpoE leader peptide RseD	NA	NA	NA	NA	NA
WP_000003307.1|1245854_1246430_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_001168374.1|1246461_1247112_+	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
WP_000812017.1|1247111_1248068_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
WP_000589049.1|1248064_1248544_+	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
WP_001007939.1|1249040_1250270_+|integrase	site-specific integrase	integrase	H6WRW7	Salmonella_phage	94.4	2.9e-233
WP_001670787.1|1250247_1250532_-	excisionase Xis	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
WP_001237031.1|1250572_1250812_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_077248255.1|1250854_1252012_-	recombinase RecT	NA	S4TTE8	Salmonella_phage	99.5	3.9e-216
1251062:1251076	attR	TTTGTTTTTTAATTC	NA	NA	NA	NA
WP_072599057.1|1251974_1254902_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	S4TNL0	Salmonella_phage	94.0	0.0e+00
WP_001574209.1|1255608_1256007_-	helix-turn-helix domain-containing protein	NA	K7PH19	Enterobacteria_phage	56.0	1.2e-18
WP_001033911.1|1256105_1256360_+	helix-turn-helix transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	60.9	5.3e-17
WP_001533160.1|1256346_1256841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000729539.1|1256887_1257895_+	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	67.8	1.2e-123
WP_157872077.1|1257806_1258349_+	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	74.8	7.1e-67
WP_000089415.1|1258363_1258759_+	DUF977 family protein	NA	A0A088CBK9	Shigella_phage	38.8	9.8e-18
WP_000529512.1|1259045_1260176_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_001237395.1|1260572_1262552_+	MBL fold metallo-hydrolase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
WP_000911593.1|1263240_1263489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000929790.1|1263551_1264154_+	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
WP_001096553.1|1264362_1264974_+	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	98.5	2.7e-91
WP_000801757.1|1264970_1265111_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
WP_001097240.1|1265107_1265797_+	antitermination protein	NA	I6PDF8	Cronobacter_phage	52.4	1.1e-59
WP_000657897.1|1266286_1266475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001110783.1|1266689_1267376_-|protease	type III secretion system effector protease GogA	protease	Q9MBM2	Phage_Gifsy-1	100.0	9.4e-133
WP_001574216.1|1267651_1267981_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_000984581.1|1267964_1268417_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	5.1e-79
WP_001533543.1|1268434_1268887_+|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	92.7	2.9e-66
WP_000669690.1|1269122_1269524_-	PPC domain-containing protein	NA	NA	NA	NA	NA
WP_001102153.1|1269810_1270356_+|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
WP_000201415.1|1272241_1272445_+	gpW family protein	NA	K7PM10	Enterobacteria_phage	73.8	1.9e-17
WP_000831821.1|1272441_1274022_+|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
WP_001189503.1|1274011_1275508_+	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	52.2	8.1e-97
WP_000011260.1|1275520_1275868_+|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	52.7	9.2e-20
WP_000201486.1|1277007_1277367_+	DNA-packaging protein FI	NA	NA	NA	NA	NA
WP_000677089.1|1277786_1278365_+|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.2	3.7e-82
WP_000479607.1|1280853_1281249_+|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
WP_010989052.1|1281245_1281584_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
WP_000372072.1|1281555_1284651_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.3	6.1e-280
WP_000447369.1|1284653_1284983_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	70.4	1.3e-42
WP_001152689.1|1284992_1285691_+|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	5.5e-104
WP_000662739.1|1285697_1286435_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	5.2e-129
WP_000246126.1|1286332_1286980_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	77.7	2.1e-89
WP_000514917.1|1287041_1290404_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	79.7	0.0e+00
WP_000178853.1|1290442_1290685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001144691.1|1290738_1293111_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0K2FIZ6	Escherichia_phage	65.6	1.1e-90
WP_000593433.1|1293107_1293932_+	macro domain-containing protein	NA	A0A0M4QWS3	Salmonella_phage	92.0	1.2e-145
WP_000143154.1|1293921_1294500_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	88.9	3.6e-93
WP_010989049.1|1294596_1294824_-	phage virulence factor PagK family protein	NA	NA	NA	NA	NA
WP_001738443.1|1294930_1295143_+	helix-turn-helix domain-containing protein	NA	S4TTF2	Salmonella_phage	90.6	3.8e-08
WP_001526383.1|1295895_1296015_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	1761101	1770272	4883715	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000569165.1|1761101_1762049_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
WP_000824855.1|1762032_1762764_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001261696.1|1762744_1762852_-	protein YohO	NA	NA	NA	NA	NA
WP_001240418.1|1762911_1763643_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_000272850.1|1763865_1765551_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_000598637.1|1765547_1766267_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000950413.1|1766313_1766781_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_001265355.1|1766837_1767368_-	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000703137.1|1767539_1767998_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_000195330.1|1768238_1770272_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 4
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	1844758	1855264	4883715		Enterobacteria_phage(37.5%)	9	NA	NA
WP_001111836.1|1844758_1846162_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
WP_000981469.1|1846339_1847233_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_000697840.1|1847609_1848695_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
WP_001023659.1|1848694_1849594_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000857530.1|1849641_1850520_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.8	5.1e-107
WP_000973714.1|1850520_1851072_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.0e-52
WP_000648783.1|1852066_1852840_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000565902.1|1852844_1853924_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.3e-16
WP_000126352.1|1853950_1855264_+	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
>prophage 5
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	1948406	1999656	4883715	plate,protease,tail,terminase,capsid,head,lysis,holin,integrase,portal	Salmonella_phage(90.16%)	67	1946158:1946172	1957272:1957286
1946158:1946172	attL	TCTTTTTCATCAAAG	NA	NA	NA	NA
WP_001219023.1|1948406_1948931_-	peptidase	NA	G9L6C4	Escherichia_phage	77.7	1.3e-36
WP_000598921.1|1950240_1951038_-	DgsA anti-repressor MtfA	NA	NA	NA	NA	NA
WP_000532847.1|1951329_1952319_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A192Y7M7	Salmonella_phage	100.0	8.6e-196
WP_001527041.1|1952320_1952548_-	DUF4224 domain-containing protein	NA	Q8HAA9	Salmonella_phage	100.0	3.2e-37
WP_001061334.1|1952587_1953157_-	3'-5' exoribonuclease	NA	A0A192Y6E0	Salmonella_phage	100.0	7.1e-110
WP_000208068.1|1953160_1953994_-	hypothetical protein	NA	Q8HAA7	Salmonella_phage	100.0	4.7e-163
WP_000065095.1|1953990_1954608_-	ead/Ea22-like family protein	NA	Q8HAA6	Salmonella_phage	100.0	2.6e-113
WP_000071070.1|1954604_1955120_-	DUF262 domain-containing protein	NA	Q8HAA5	Salmonella_phage	100.0	7.4e-98
WP_000764235.1|1955116_1955347_-	hypothetical protein	NA	Q8HAA4	Salmonella_phage	100.0	2.0e-34
WP_000008351.1|1955417_1955957_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
WP_000551792.1|1956051_1956969_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	59.1	1.4e-96
WP_000141749.1|1957266_1957497_+	hypothetical protein	NA	NA	NA	NA	NA
1957272:1957286	attR	CTTTGATGAAAAAGA	NA	NA	NA	NA
WP_001020636.1|1957909_1958605_-	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	100.0	3.2e-128
WP_001191666.1|1958702_1958927_+	helix-turn-helix transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
WP_000509731.1|1958955_1959510_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
WP_170324263.1|1959506_1961357_+	Rha family transcriptional regulator	NA	Q8HA97	Salmonella_phage	50.0	1.3e-16
WP_000620702.1|1961353_1961578_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
WP_000061500.1|1961574_1962393_+	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	100.0	2.8e-136
WP_001684745.1|1962394_1962877_+	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	100.0	1.1e-87
WP_000066908.1|1962876_1963770_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	100.0	7.6e-175
WP_001241579.1|1963766_1964156_+	RusA family crossover junction endodeoxyribonuclease	NA	Q8HA93	Salmonella_phage	100.0	3.7e-70
WP_001061457.1|1964172_1965033_+	KilA-N domain-containing protein	NA	Q8HA92	Salmonella_phage	100.0	2.9e-163
WP_001202277.1|1965040_1966030_+	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.6	4.9e-191
WP_000188927.1|1966040_1966664_+	hypothetical protein	NA	Q8HA89	Salmonella_phage	100.0	9.1e-119
WP_001527054.1|1966796_1967054_+	hypothetical protein	NA	Q8HA88	Salmonella_phage	100.0	5.2e-44
WP_014343859.1|1966983_1967418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001527046.1|1967579_1967924_+|holin	phage holin, lambda family	holin	Q8HA87	Salmonella_phage	100.0	5.3e-44
WP_001005901.1|1967926_1968541_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	100.0	9.3e-116
WP_001050825.1|1968537_1969023_+|lysis	lysis protein	lysis	Q8HA85	Salmonella_phage	100.0	5.9e-81
WP_000877027.1|1969235_1969655_+	KilA-N domain-containing protein	NA	Q8HA84	Salmonella_phage	100.0	4.8e-71
WP_001292890.1|1969874_1970177_+	hypothetical protein	NA	Q8HA83	Salmonella_phage	100.0	3.6e-52
WP_001135225.1|1970237_1970588_+	HNH endonuclease	NA	Q8HA82	Salmonella_phage	100.0	2.5e-65
WP_000929191.1|1970713_1971208_+|terminase	phage terminase small subunit P27 family	terminase	Q8HAD7	Salmonella_phage	100.0	4.6e-89
WP_000088182.1|1971204_1972938_+|terminase	terminase large subunit	terminase	Q8HAD6	Salmonella_phage	100.0	0.0e+00
WP_000605609.1|1972949_1973132_+	hypothetical protein	NA	Q8HAD5	Salmonella_phage	100.0	1.0e-25
WP_000466254.1|1973131_1974373_+|portal	phage portal protein	portal	Q8HAD4	Salmonella_phage	99.8	2.0e-242
WP_001193639.1|1974350_1975001_+|head,protease	HK97 family phage prohead protease	head,protease	Q8HAD3	Salmonella_phage	100.0	1.5e-119
WP_000257528.1|1975015_1976221_+|capsid	phage major capsid protein	capsid	Q8HAD2	Salmonella_phage	100.0	1.6e-223
WP_000601353.1|1976271_1976472_+	hypothetical protein	NA	Q8HAD1	Salmonella_phage	100.0	1.4e-28
WP_000927378.1|1976474_1976798_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A192Y8J4	Salmonella_phage	100.0	6.3e-55
WP_000702408.1|1976794_1977199_+|head	phage head closure protein	head	Q8HAC9	Salmonella_phage	100.0	1.4e-72
WP_001135697.1|1977170_1977683_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	100.0	4.6e-92
WP_000779218.1|1977679_1978240_+	hypothetical protein	NA	Q8HAC7	Salmonella_phage	100.0	3.0e-105
WP_000497739.1|1978243_1978408_+	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	100.0	1.0e-24
WP_001007991.1|1978397_1979894_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	Q8HAC5	Salmonella_phage	100.0	2.7e-278
WP_000515952.1|1979893_1980250_+|tail	phage tail tube protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
WP_000588852.1|1980246_1980573_+|tail	phage tail assembly protein	tail	Q8HAC3	Salmonella_phage	99.1	2.3e-52
WP_000785385.1|1980657_1982586_+|tail	phage tail tape measure protein	tail	Q8HAC2	Salmonella_phage	99.8	0.0e+00
WP_000863818.1|1982619_1983960_+	DNA circularization N-terminal domain-containing protein	NA	A0A192Y5U9	Salmonella_phage	99.6	5.7e-251
WP_001066636.1|1983956_1985015_+	hypothetical protein	NA	Q8HAC0	Salmonella_phage	100.0	1.3e-202
WP_001273649.1|1985014_1985548_+|plate	phage baseplate assembly protein	plate	Q8HAB9	Salmonella_phage	100.0	1.4e-96
WP_000605050.1|1985552_1985966_+	phage GP46 family protein	NA	Q8HAB8	Salmonella_phage	100.0	1.1e-75
WP_000785580.1|1985958_1987038_+|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	99.7	2.5e-204
WP_001207832.1|1987040_1987628_+	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	100.0	2.9e-114
WP_000554737.1|1987614_1989177_+	hypothetical protein	NA	Q8HAB4	Salmonella_phage	100.0	2.6e-287
WP_015701331.1|1989146_1989746_+|tail	tail fiber assembly protein	tail	Q8HAB3	Salmonella_phage	100.0	5.9e-107
WP_000492926.1|1990030_1991038_-	type III secretion system effector arginine glycosyltransferase	NA	Q8HAB2	Salmonella_phage	100.0	7.9e-197
WP_001526483.1|1991250_1991472_+	helix-turn-helix domain-containing protein	NA	Q8HAB1	Salmonella_phage	100.0	1.2e-36
WP_001532308.1|1992102_1992264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000394197.1|1992390_1992810_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
WP_000457666.1|1992812_1994081_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	91.7	1.3e-225
WP_000187976.1|1994535_1994748_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	5.1e-21
WP_024131109.1|1994758_1994947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001080683.1|1995204_1996416_-	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	56.0	1.3e-108
WP_000107430.1|1997065_1997365_+	membrane protein	NA	NA	NA	NA	NA
WP_000377048.1|1997456_1998152_+	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.1e-07
WP_001157313.1|1998225_1999656_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
>prophage 6
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	2761181	2803310	4883715	plate,tail,head,lysis,holin,integrase	Salmonella_phage(17.39%)	60	2752830:2752844	2801997:2802011
2752830:2752844	attL	TTTAAAGAGGTAATA	NA	NA	NA	NA
WP_000143157.1|2761181_2761766_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	82.2	2.8e-85
WP_000772814.1|2761765_2763217_-|tail	tail fiber protein	tail	E5G6P0	Salmonella_phage	69.6	1.2e-41
WP_001181747.1|2763206_2763809_-	DUF2612 domain-containing protein	NA	A0A2R3UAM9	Myoviridae_environmental_samples	38.9	3.3e-33
WP_001293658.1|2763810_2765052_-|plate	baseplate J/gp47 family protein	plate	A0A077KGW9	Edwardsiella_phage	49.9	1.2e-101
WP_001191865.1|2765048_2765405_-	hypothetical protein	NA	A0A077KCA1	Edwardsiella_phage	49.1	1.6e-19
WP_000068499.1|2765417_2766095_-	oxidoreductase	NA	A0A077KAY0	Edwardsiella_phage	36.4	5.4e-32
WP_000122818.1|2766075_2766945_-	hypothetical protein	NA	A0A077KC17	Edwardsiella_phage	32.7	9.1e-32
WP_000890115.1|2766941_2767244_-	hypothetical protein	NA	A0A077K9U4	Edwardsiella_phage	49.5	7.0e-24
WP_000010345.1|2767243_2767954_-	hypothetical protein	NA	A0A077KGW3	Edwardsiella_phage	34.6	8.5e-28
WP_000741783.1|2767950_2770122_-	transglycosylase SLT domain-containing protein	NA	A0A0M4REK7	Salmonella_phage	67.1	1.1e-49
WP_000386822.1|2770105_2770285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000101346.1|2770329_2770734_-	hypothetical protein	NA	H9C0W7	Aeromonas_phage	44.8	1.8e-19
WP_000016413.1|2770733_2771180_-	hypothetical protein	NA	Q2NPD1	Xanthomonas_phage	39.7	4.8e-21
WP_001122279.1|2771180_2772665_-	DUF3383 domain-containing protein	NA	A0A077KGV4	Edwardsiella_phage	40.4	5.8e-95
WP_000094503.1|2772645_2773191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001048639.1|2773175_2773541_-	hypothetical protein	NA	A0A077KAW7	Edwardsiella_phage	40.5	3.0e-21
WP_000247615.1|2773537_2774122_-	hypothetical protein	NA	H9C0W2	Aeromonas_phage	31.7	3.2e-17
WP_000537612.1|2774115_2774562_-	DUF4054 domain-containing protein	NA	A0A068CGG9	Acinetobacter_phage	43.1	1.8e-15
WP_000829562.1|2774567_2774915_-	hypothetical protein	NA	A0A1X9SFA9	Acinetobacter_phage	35.4	2.1e-08
WP_001031911.1|2774918_2775947_-	hypothetical protein	NA	A0A219YBB0	Aeromonas_phage	48.4	8.7e-82
WP_001091402.1|2775946_2776429_-	hypothetical protein	NA	K4HYQ5	Acinetobacter_phage	41.2	5.8e-20
WP_000587352.1|2776430_2777777_-	DUF2213 domain-containing protein	NA	A0A219YCD3	Aeromonas_phage	36.5	1.1e-68
WP_000552015.1|2777773_2778463_-|head	head morphogenesis protein	head	H9C0V1	Aeromonas_phage	48.7	1.0e-57
WP_000266182.1|2778503_2780024_-	DUF1073 domain-containing protein	NA	A0A2R3UAL5	Myoviridae_environmental_samples	43.9	2.6e-106
WP_001130802.1|2780023_2781643_-	hypothetical protein	NA	A0A0M5M1R6	Salmonella_phage	81.2	1.9e-261
WP_001118124.1|2781645_2782275_-	hypothetical protein	NA	A0A0M3ULJ9	Salmonella_phage	97.6	1.3e-107
WP_001288297.1|2782339_2782753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001533411.1|2783053_2783242_-	DUF826 domain-containing protein	NA	NA	NA	NA	NA
WP_086010415.1|2783399_2783903_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	78.5	5.8e-55
WP_001208107.1|2784220_2784760_-	lysozyme	NA	S5MQK2	Escherichia_phage	74.1	5.7e-77
WP_001533331.1|2784737_2785040_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_001533418.1|2785289_2785757_+	DUF2441 domain-containing protein	NA	NA	NA	NA	NA
WP_000690097.1|2785768_2785987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000658040.1|2786140_2786329_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000155182.1|2786571_2787123_-	ORF6N domain-containing protein	NA	A0A0P0ZDQ5	Stx2-converting_phage	94.8	1.3e-55
WP_000211400.1|2787385_2787697_-	ORF6N domain-containing protein	NA	A0A0N7C203	Escherichia_phage	74.4	6.5e-41
WP_000639983.1|2787962_2788517_-	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	65.3	5.7e-64
WP_000926968.1|2788513_2788810_-	DUF1364 family protein	NA	K7P7Q1	Enterobacteria_phage	81.3	1.6e-36
WP_000784711.1|2788791_2788986_-	hypothetical protein	NA	S4TNP0	Salmonella_phage	61.5	7.9e-13
WP_000940757.1|2788982_2789582_-	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	83.9	2.9e-98
WP_000911593.1|2789645_2789894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001597144.1|2790144_2790300_-	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	84.3	1.2e-14
WP_000687967.1|2790503_2790776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000533386.1|2790772_2791168_-	DUF977 family protein	NA	A0A088CBK9	Shigella_phage	37.0	3.7e-17
WP_162010736.1|2791179_2791722_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	73.9	2.9e-68
WP_000729543.1|2791633_2792641_-	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	69.3	5.1e-127
WP_024159654.1|2792687_2793182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001033909.1|2793168_2793423_-	helix-turn-helix transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	59.4	1.2e-16
WP_001224472.1|2793519_2793945_+	helix-turn-helix domain-containing protein	NA	K7PH71	Enterobacterial_phage	56.3	1.2e-13
WP_024133274.1|2794388_2794568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613376.1|2794998_2795283_+	hypothetical protein	NA	K7PGY4	Enterobacteria_phage	53.2	5.1e-08
WP_000799629.1|2795357_2795693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000023731.1|2795833_2798524_+	exodeoxyribonuclease VIII	NA	Q9QF34	Lambdoid_phage	74.9	1.1e-115
WP_001126032.1|2798516_2799347_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	72.0	1.0e-104
WP_001033922.1|2799382_2799703_+	hypothetical protein	NA	A0A222YY67	Escherichia_phage	59.2	1.8e-33
WP_000066251.1|2799695_2800028_+	hypothetical protein	NA	S4TNP2	Salmonella_phage	81.8	8.8e-20
WP_000069466.1|2800024_2800528_+	hypothetical protein	NA	A0A075B8H2	Enterobacteria_phage	92.3	6.0e-36
WP_000089141.1|2800577_2800814_+	excisionase	NA	NA	NA	NA	NA
WP_000741322.1|2800803_2801946_+|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	O21929	Phage_21	79.7	2.0e-172
WP_000444507.1|2802059_2803310_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	1.1e-19
2801997:2802011	attR	TTTAAAGAGGTAATA	NA	NA	NA	NA
>prophage 7
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	2951095	3050412	4883715	protease,tail,terminase,capsid,head,lysis,tRNA,holin,portal,transposase	Salmonella_phage(38.18%)	98	NA	NA
WP_024135496.1|2951095_2951776_+|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	72.0	1.4e-83
WP_000374046.1|2952395_2953055_+|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_000904446.1|2953141_2953471_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000072884.1|2953467_2953749_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000548081.1|2953797_2954577_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000859410.1|2954602_2955151_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000140480.1|2955365_2956577_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000561983.1|2956634_2956952_+	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_001537782.1|2956996_2957410_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_000847735.1|2957583_2958246_+	DUF2057 family protein	NA	NA	NA	NA	NA
WP_000424187.1|2958340_2958799_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000420505.1|2958834_2960889_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
WP_001261222.1|2961012_2961459_+	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000950881.1|2961477_2963631_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001202375.1|2963617_2964223_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000288732.1|2964439_2964949_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001670727.1|2965305_2966358_+	porin OmpA	NA	NA	NA	NA	NA
WP_000877172.1|2966429_2966882_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_000156459.1|2967067_2968828_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000227928.1|2968896_2969415_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_001537784.1|2969514_2969682_-	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000759136.1|2969937_2970501_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_000433414.1|2970497_2972138_-	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000333152.1|2972142_2973396_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000053051.1|2973410_2975318_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	5.4e-53
WP_001086485.1|2975330_2977439_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000224076.1|2977537_2978647_+	YcbX family protein	NA	NA	NA	NA	NA
WP_001220671.1|2978643_2979186_-	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000291725.1|2979351_2980362_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_000193785.1|2980569_2983182_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	6.3e-20
WP_000497441.1|2983608_2983800_+	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_001525490.1|2984070_2984757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010989011.1|2984741_2985041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000334547.1|2985109_2985736_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_001533476.1|2986383_2987352_-	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.7	7.9e-194
WP_000143167.1|2987827_2988409_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
WP_001144670.1|2988408_2990847_-|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0K2FIZ6	Escherichia_phage	63.2	9.2e-90
WP_000178851.1|2990902_2991145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072599065.1|2991183_2994546_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	79.9	0.0e+00
WP_000246126.1|2994607_2995255_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	77.7	2.1e-89
WP_000662739.1|2995152_2995890_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	5.2e-129
WP_001152689.1|2995896_2996595_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	5.5e-104
WP_000447369.1|2996604_2996934_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	70.4	1.3e-42
WP_000372072.1|2996936_3000032_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.3	6.1e-280
WP_010989052.1|3000003_3000342_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
WP_000479607.1|3000338_3000734_-|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
WP_000971954.1|3000784_3001531_-	Ig-like domain-containing protein	NA	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
WP_000033885.1|3001538_3001940_-|tail	tail protein	tail	Q9G0F3	Phage_Gifsy-1	100.0	8.1e-52
WP_000817263.1|3002048_3003179_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	100.0	9.2e-218
WP_000677089.1|3003227_3003806_-|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.2	3.7e-82
WP_000083294.1|3003833_3004217_-|head,tail	head-tail joining protein	head,tail	A0A0K2FJB7	Enterobacteria_phage	55.6	9.2e-29
WP_000201486.1|3004227_3004587_-	DNA-packaging protein FI	NA	NA	NA	NA	NA
WP_000522566.1|3004644_3005673_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	61.1	1.7e-114
WP_000011260.1|3005727_3006075_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	52.7	9.2e-20
WP_001189503.1|3006087_3007584_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	52.2	8.1e-97
WP_000831821.1|3007573_3009154_-|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
WP_000201415.1|3009150_3009354_-	gpW family protein	NA	K7PM10	Enterobacteria_phage	73.8	1.9e-17
WP_000623091.1|3009337_3011269_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	65.7	6.3e-259
WP_001102153.1|3011240_3011786_-|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
WP_000669690.1|3012072_3012474_+	PPC domain-containing protein	NA	NA	NA	NA	NA
WP_001533543.1|3012709_3013162_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	92.7	2.9e-66
WP_000984581.1|3013179_3013632_-	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	5.1e-79
WP_001574216.1|3013615_3013945_-|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_001110783.1|3014220_3014907_+|protease	type III secretion system effector protease GogA	protease	Q9MBM2	Phage_Gifsy-1	100.0	9.4e-133
WP_000657897.1|3015121_3015310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001097240.1|3015799_3016489_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	52.4	1.1e-59
WP_000801757.1|3016485_3016626_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
WP_001096553.1|3016622_3017234_-	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	98.5	2.7e-91
WP_000929790.1|3017442_3018045_-	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
WP_001217669.1|3018459_3018693_-	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
WP_023888896.1|3018984_3019275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000113622.1|3019515_3019824_-	DUF977 family protein	NA	H6WRX9	Salmonella_phage	96.9	1.4e-48
WP_000800012.1|3019834_3020584_-	ATP-binding protein	NA	S4TNF5	Salmonella_phage	100.0	4.3e-139
WP_000062941.1|3020586_3021570_-	replication protein	NA	H6WRX7	Salmonella_phage	100.0	1.9e-163
WP_001574095.1|3021654_3022029_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
WP_000370145.1|3021994_3022234_-	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
WP_001038966.1|3022353_3022764_+	helix-turn-helix domain-containing protein	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
WP_077905303.1|3022813_3023074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000917564.1|3023066_3023225_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	1.2e-22
WP_001668146.1|3023246_3023546_+	hypothetical protein	NA	S4TSN6	Salmonella_phage	84.5	8.1e-49
WP_000017133.1|3023672_3026558_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	S4TNL0	Salmonella_phage	97.3	0.0e+00
WP_001539618.1|3026520_3027678_+	recombinase RecT	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
WP_001237031.1|3027720_3027960_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_000065276.1|3028000_3028249_+	excisionase family protein	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
WP_001262306.1|3028293_3029586_+	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	99.8	1.0e-252
WP_000191404.1|3029780_3030983_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000544861.1|3032742_3033957_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000762343.1|3034273_3034735_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000117867.1|3034935_3036336_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	4.5e-81
WP_000977709.1|3036942_3038034_+	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000462653.1|3038218_3039409_+	aspartate transaminase	NA	NA	NA	NA	NA
WP_001109471.1|3039470_3040118_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000357052.1|3040145_3040694_-	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_000925891.1|3040953_3042798_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000572733.1|3043142_3047609_-	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000060027.1|3047608_3048313_-	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_001288828.1|3048293_3049616_-	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_001154028.1|3049608_3050412_-|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
>prophage 8
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	3101080	3108393	4883715	protease	Ralstonia_phage(16.67%)	7	NA	NA
WP_001531374.1|3101080_3101458_+	hypothetical protein	NA	A0A077KET4	Ralstonia_phage	40.2	1.7e-19
WP_001117984.1|3101619_3101817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000934064.1|3102029_3104306_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_000520789.1|3104336_3104657_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000447499.1|3104980_3105202_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000125877.1|3105331_3107278_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
WP_001201753.1|3107274_3108393_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
>prophage 9
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	4209806	4219077	4883715	integrase	Enterobacteria_phage(85.71%)	11	4215374:4215390	4224131:4224147
WP_049264295.1|4209806_4212140_-	toprim domain-containing protein	NA	Q7M2A8	Enterobacteria_phage	84.6	0.0e+00
WP_000856726.1|4212154_4212475_-	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_000683330.1|4212471_4212699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000980263.1|4212695_4213247_-	ash family protein	NA	Q7M2A7	Enterobacteria_phage	66.7	9.2e-30
WP_000556592.1|4213243_4213510_-	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.0e-30
WP_000132742.1|4214050_4214788_+	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	63.7	7.6e-80
WP_000984213.1|4214784_4215045_+	ogr/Delta-like zinc finger family protein	NA	Q7M294	Enterobacteria_phage	67.9	6.4e-26
WP_000147524.1|4215044_4215608_+	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	61.7	3.4e-56
4215374:4215390	attL	GCCCGCGATGATAAAAA	NA	NA	NA	NA
WP_001163325.1|4215876_4217109_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000481847.1|4217112_4217787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000772673.1|4217823_4219077_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	41.0	2.8e-74
4224131:4224147	attR	TTTTTATCATCGCGGGC	NA	NA	NA	NA
>prophage 10
NZ_CP015924	Salmonella enterica subsp. enterica serovar Newport str. Levine 15 chromosome, complete genome	4883715	4464906	4508953	4883715	plate,tail,tRNA,holin	Burkholderia_phage(44.44%)	43	NA	NA
WP_001182219.1|4464906_4465905_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_001039337.1|4465992_4467303_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_000416272.1|4467549_4468065_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001030592.1|4468164_4468374_-	CsbD family protein	NA	NA	NA	NA	NA
WP_001575282.1|4468395_4468509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001128118.1|4468505_4469831_-	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_000646079.1|4470009_4470618_-	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
WP_000002900.1|4470726_4471095_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_000017360.1|4471265_4473686_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_000455249.1|4473784_4474657_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_000019231.1|4474670_4475168_-	chorismate lyase	NA	NA	NA	NA	NA
WP_000782497.1|4475348_4476266_-	maltose operon protein MalM	NA	NA	NA	NA	NA
WP_000973642.1|4476429_4477788_-	maltoporin	NA	NA	NA	NA	NA
WP_000179176.1|4477876_4478986_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
WP_000695415.1|4479346_4480537_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
WP_000382573.1|4480668_4482213_+	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
WP_001252085.1|4482227_4483118_+	maltose ABC transporter permease MalG	NA	NA	NA	NA	NA
WP_000982749.1|4483283_4483694_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_000750809.1|4483836_4485933_-	YjbH domain-containing protein	NA	NA	NA	NA	NA
WP_000977968.1|4485932_4486670_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA	NA
WP_123220402.1|4486666_4487335_-	YjbF family lipoprotein	NA	NA	NA	NA	NA
WP_001541297.1|4487368_4487611_-	outer membrane protein	NA	NA	NA	NA	NA
WP_000790042.1|4488054_4489704_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000136394.1|4490048_4491398_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_000615248.1|4491528_4491876_-	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
WP_001226439.1|4492452_4492740_+|holin	putative holin	holin	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
WP_001203711.1|4492742_4493348_+	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.4	9.3e-60
WP_000777266.1|4493360_4493675_+	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_000449399.1|4493834_4494290_+	Gp37 family protein	NA	NA	NA	NA	NA
WP_000875314.1|4494286_4494484_+	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000729853.1|4494473_4495901_+|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.4e-194
WP_000907494.1|4495900_4496425_+|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_001003635.1|4496476_4496794_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_001185654.1|4496753_4496882_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001262472.1|4496978_4499330_+|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.3	3.4e-65
WP_000679389.1|4500805_4501528_+|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_000593182.1|4501855_4502218_+	GtrA family protein	NA	I1TED9	Salmonella_phage	70.8	1.2e-43
WP_000703630.1|4502214_4503144_+	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	83.8	2.3e-150
WP_001095013.1|4503143_4504691_+	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.7	5.5e-48
WP_001093501.1|4504854_4505214_+	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_000951736.1|4505204_4506320_+|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	52.2	1.8e-101
WP_000359500.1|4506312_4506945_+|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	6.6e-24
WP_001177097.1|4508437_4508953_+|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	41.2	3.4e-34
