The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	0	3693	4755838		Enterobacteria_phage(100.0%)	4	NA	NA
WP_000980354.1|246_804_+	ash family protein	NA	Q7M2A7	Enterobacteria_phage	66.4	2.7e-29
WP_001216598.1|800_1028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000743153.1|1024_1345_+	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_000783706.1|1359_3693_+	toprim domain-containing protein	NA	Q7M2A8	Enterobacteria_phage	83.5	0.0e+00
>prophage 2
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	6757	13144	4755838		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000190913.1|6757_7324_+	flagellar phase variation DNA invertase Hin	NA	A0A0A7NPV4	Enterobacteria_phage	72.6	6.7e-68
WP_001221103.1|8291_9407_+	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA	NA
WP_001111796.1|9487_13144_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.0	1.6e-45
>prophage 3
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	33514	37518	4755838		Klosneuvirus(50.0%)	4	NA	NA
WP_001095560.1|33514_34798_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	31.4	2.1e-32
WP_000531282.1|34927_36328_+	GABA permease	NA	NA	NA	NA	NA
WP_000126152.1|36369_37047_+	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA	NA
WP_000522406.1|37068_37518_-	peptidoglycan-binding protein LysM	NA	A0A090DBR9	Clostridium_phage	38.2	7.5e-06
>prophage 4
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	44016	49071	4755838		Bacillus_phage(25.0%)	4	NA	NA
WP_001275409.1|44016_44427_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	41.8	2.5e-16
WP_000246627.1|44399_46544_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	48.7	3.8e-196
WP_000777905.1|46554_47514_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0M4S3B4	Mycobacterium_phage	71.8	4.7e-130
WP_000985529.1|47868_49071_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	NA	G3M9Y6	Bacillus_virus	38.8	1.4e-27
>prophage 5
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	60907	68273	4755838	tRNA	Acanthocystis_turfacea_Chlorella_virus(20.0%)	6	NA	NA
WP_000271289.1|60907_61474_-	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	28.1	2.5e-14
WP_000906486.1|62726_62912_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	66.7	4.9e-12
WP_000047224.1|63146_65777_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	38.3	3.5e-79
WP_001294870.1|66012_66513_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_000963150.1|66629_67691_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	63.8	3.0e-114
WP_001669761.1|67775_68273_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	51.0	7.5e-31
>prophage 6
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	74180	75146	4755838		Tetraselmis_virus(100.0%)	1	NA	NA
WP_001278201.1|74180_75146_+	arabinose-5-phosphate isomerase GutQ	NA	A0A2P0VNK5	Tetraselmis_virus	34.5	4.0e-36
>prophage 7
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	99062	99884	4755838		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000083153.1|99062_99884_+	iron/manganese ABC transporter ATP-binding protein SitB	NA	A0A2R8FG22	Brazilian_cedratvirus	26.5	3.1e-13
>prophage 8
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	133377	135066	4755838		Vibrio_phage(100.0%)	1	NA	NA
WP_000848101.1|133377_135066_-	type III secretion system outer membrane ring protein InvG	NA	R9TEZ5	Vibrio_phage	27.8	3.9e-15
>prophage 9
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	140642	146371	4755838		Escherichia_phage(50.0%)	5	NA	NA
WP_000420452.1|140642_141299_+	protein-serine/threonine phosphatase	NA	Q71TJ1	Escherichia_phage	47.9	7.8e-52
WP_000424948.1|141470_141965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000445914.1|141991_142660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001669175.1|143234_143645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001005814.1|143803_146371_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	21.4	6.6e-30
>prophage 10
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	152337	162764	4755838		Escherichia_phage(50.0%)	12	NA	NA
WP_000153636.1|152337_152976_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.8e-85
WP_000912485.1|152972_154235_-	3-oxo-tetronate kinase	NA	A0A077SLJ7	Escherichia_phage	61.8	1.7e-132
WP_000206952.1|154228_155152_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	77.1	6.3e-116
WP_000613184.1|155348_156113_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	57.5	1.1e-70
WP_000423338.1|156131_156536_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001237182.1|156706_157300_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_000863159.1|157299_158727_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_000562964.1|158737_158974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000081498.1|159018_160011_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272632.1|160073_161207_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	5.0e-06
WP_000253545.1|161382_162009_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	4.8e-35
WP_001221538.1|162002_162764_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.8	1.4e-57
>prophage 11
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	165874	167906	4755838		Tupanvirus(50.0%)	2	NA	NA
WP_001173663.1|165874_166480_-	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	39.6	1.3e-29
WP_001092268.1|166466_167906_-	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	26.5	1.0e-32
>prophage 12
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	188925	192751	4755838		Vibrio_phage(33.33%)	3	NA	NA
WP_001199961.1|188925_189597_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A2I7S8X1	Vibrio_phage	24.6	3.9e-14
WP_000036734.1|189732_191031_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	58.6	1.3e-130
WP_000210858.1|191113_192751_-	CTP synthase (glutamine hydrolyzing)	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.0	9.4e-155
>prophage 13
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	203805	209101	4755838		Erysipelothrix_phage(33.33%)	3	NA	NA
WP_000046852.1|203805_205101_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	28.0	1.8e-36
WP_000186400.1|205158_207915_+	two-component sensor histidine kinase BarA	NA	A0A1V0SGX0	Hokovirus	29.3	3.0e-52
WP_000706475.1|207958_209101_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	40.6	4.5e-47
>prophage 14
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	216520	217369	4755838		Vibrio_phage(100.0%)	1	NA	NA
WP_000100459.1|216520_217369_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.5	2.7e-41
>prophage 15
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	222235	223051	4755838		Bacillus_phage(100.0%)	1	NA	NA
WP_000881449.1|222235_223051_+	flap endonuclease Xni	NA	F8WQ40	Bacillus_phage	31.2	7.0e-10
>prophage 16
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	234594	251173	4755838	tRNA	environmental_halophage(16.67%)	10	NA	NA
WP_000991068.1|234594_235800_+	cysteine desulfurase CsdA	NA	Q2XUY6	environmental_halophage	36.0	9.5e-72
WP_000184199.1|235799_236243_+	cysteine desulfurase sulfur acceptor subunit CsdE	NA	NA	NA	NA	NA
WP_077906292.1|236542_237430_+	EamA family transporter RarD	NA	NA	NA	NA	NA
WP_000117748.1|237481_238288_-|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	32.8	6.5e-16
WP_000678621.1|238397_239495_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_000011919.1|239994_241248_-	N-acetylmuramoyl-L-alanine amidase AmiC	NA	E5DV68	Deep-sea_thermophilic_phage	28.9	1.9e-14
WP_000588964.1|241480_242812_+	amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
WP_000155144.1|242914_244750_-	exodeoxyribonuclease V subunit alpha	NA	A0A2P0VMS9	Tetraselmis_virus	25.2	1.9e-18
WP_001000541.1|244746_248292_-	exodeoxyribonuclease V subunit beta	NA	A7KV33	Bacillus_phage	21.8	3.6e-10
WP_001138245.1|248284_251173_-	pitrilysin	NA	A0A1V0SJA4	Klosneuvirus	23.7	4.8e-61
>prophage 17
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	256655	263610	4755838		Cronobacter_phage(33.33%)	6	NA	NA
WP_000816247.1|256655_257450_-	thymidylate synthase	NA	R4IFY1	Cronobacter_phage	63.2	2.6e-118
WP_000204647.1|257456_258332_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_000957887.1|258547_260794_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	25.7	2.1e-11
WP_000564481.1|260806_261337_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001274930.1|262019_262715_+	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA	NA
WP_000895635.1|262896_263610_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	47.3	6.9e-46
>prophage 18
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	274440	276974	4755838		Aichi_virus(50.0%)	2	NA	NA
WP_000253650.1|274440_275859_-	arabinose-proton symporter AraE	NA	O13311	Aichi_virus	26.7	3.5e-25
WP_000602491.1|276212_276974_-	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	5.9e-19
>prophage 19
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	291664	292201	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_001038502.1|291664_292201_-	porin family protein	NA	A5LH44	Enterobacteria_phage	30.7	5.6e-16
>prophage 20
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	295427	303174	4755838	tRNA	Clostridium_phage(20.0%)	7	NA	NA
WP_000244328.1|295427_296186_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I2E8W3	Clostridium_phage	39.5	1.2e-11
WP_000133986.1|296450_296996_+	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_000003339.1|297071_298589_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	37.1	4.8e-89
WP_010989230.1|298598_299697_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.0	1.8e-05
WP_000813394.1|299801_301535_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.4	8.1e-64
WP_000745621.1|301540_302254_-	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA	NA
WP_000434302.1|302277_303174_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	28.9	1.4e-30
>prophage 21
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	307155	312859	4755838		Pandoravirus(50.0%)	3	NA	NA
WP_001230141.1|307155_308589_+	6-phospho-beta-glucosidase BglA	NA	A0A0B5JD41	Pandoravirus	26.2	8.8e-32
WP_000819375.1|308636_309530_-	transporter	NA	NA	NA	NA	NA
WP_000194985.1|309985_312859_-	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	51.2	1.4e-262
>prophage 22
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	321127	322360	4755838		Catovirus(100.0%)	1	NA	NA
WP_001151627.1|321127_322360_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	47.9	1.8e-102
>prophage 23
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	333544	334234	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000956929.1|333544_334234_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	29.2	3.5e-10
>prophage 24
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	348042	349515	4755838		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_000379533.1|348042_349515_-	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	33.0	1.5e-47
>prophage 25
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	355341	356496	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001062140.1|355341_356496_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
>prophage 26
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	373804	374890	4755838		Geobacillus_virus(100.0%)	1	NA	NA
WP_000976285.1|373804_374890_+	membrane-bound lytic murein transglycosylase MltC	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
>prophage 27
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	396796	397675	4755838		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_001137804.1|396796_397675_-	carbon-nitrogen hydrolase family protein	NA	M1HPY5	Paramecium_bursaria_Chlorella_virus	28.4	2.7e-07
>prophage 28
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	401074	402547	4755838		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_000437129.1|401074_402547_+	fructuronate reductase	NA	H8ZJP8	Ostreococcus_tauri_virus	29.2	9.3e-45
>prophage 29
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	417972	423112	4755838		uncultured_Caudovirales_phage(50.0%)	6	NA	NA
WP_001238434.1|417972_419616_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	56.7	1.1e-09
WP_000439335.1|419922_420417_-	TIGR00645 family protein	NA	NA	NA	NA	NA
WP_000433052.1|420695_421211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000936442.1|421302_421713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000665658.1|421699_422104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000019032.1|422227_423112_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	48.2	1.5e-66
>prophage 30
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	429053	434757	4755838		Staphylococcus_phage(33.33%)	5	NA	NA
WP_000013100.1|429053_429881_+	2,5-didehydrogluconate reductase DkgA	NA	A0A2H4PQR8	Staphylococcus_phage	46.0	8.6e-64
WP_000818502.1|430077_431532_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
WP_000128242.1|431576_432032_+	HIT family protein	NA	Q5YEY9	Rock_bream_iridovirus	36.8	2.4e-20
WP_000525384.1|432189_432384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001274458.1|432585_434757_-	YgiQ family radical SAM protein	NA	M1QSD9	Pseudomonas_phage	70.8	2.0e-104
>prophage 31
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	440594	444294	4755838		Bacillus_virus(50.0%)	3	NA	NA
WP_001281853.1|440594_442853_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	35.8	3.0e-87
WP_000998791.1|442963_443830_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000731552.1|443901_444294_-	YgiW/YdeI family stress tolerance OB fold protein	NA	A0A1I9LJU6	Stx_converting_phage	48.1	1.6e-20
>prophage 32
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	447609	449502	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000195318.1|447609_449502_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	34.8	5.3e-93
>prophage 33
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	453902	455743	4755838		Erwinia_phage(50.0%)	2	NA	NA
WP_000831525.1|453902_454574_+	DUF1190 family protein	NA	A0A173GEW8	Erwinia_phage	44.9	5.7e-34
WP_000442833.1|454579_455743_+	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	42.9	1.4e-88
>prophage 34
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	461499	462153	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001076978.1|461499_462153_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	43.8	1.6e-44
>prophage 35
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	466206	467640	4755838		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000867682.1|466206_467640_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	29.0	8.8e-40
>prophage 36
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	472868	489731	4755838	tRNA	Sinorhizobium_phage(14.29%)	14	NA	NA
WP_000708447.1|472868_474110_+	multifunctional CCA addition/repair protein	NA	A0A0F6YPT7	Sinorhizobium_phage	47.9	6.5e-92
WP_001281933.1|474214_475036_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000355776.1|475133_475493_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA	NA
WP_001272784.1|475599_476211_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_001264391.1|476460_477474_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	59.5	2.8e-109
WP_001144069.1|477701_477917_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_000918864.1|478152_479898_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.4	2.1e-72
WP_001519776.1|480047_481895_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
WP_000237776.1|482018_482525_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
WP_000213689.1|482805_483573_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_000983434.1|483804_484452_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000478471.1|484448_486014_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.9	1.7e-12
WP_000094651.1|486401_487922_-	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	48.5	6.4e-33
WP_122815345.1|488300_489731_+	putrescine aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	29.0	3.0e-32
>prophage 37
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	495921	496890	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_001098837.1|495921_496890_+	TerC family protein	NA	I7HPH5	Enterobacteria_phage	34.9	2.2e-39
>prophage 38
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	510086	512381	4755838		Tetraselmis_virus(100.0%)	1	NA	NA
WP_000867323.1|510086_512381_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.2	5.7e-158
>prophage 39
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	518193	519339	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_000706460.1|518193_519339_-	glycerate 2-kinase	NA	W6LM47	Streptococcus_phage	40.6	4.5e-47
>prophage 40
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	530026	536675	4755838		Streptococcus_phage(25.0%)	9	NA	NA
WP_000812298.1|530026_530890_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	42.6	1.5e-50
WP_000249236.1|530953_532996_+	penicillin-binding protein activator	NA	NA	NA	NA	NA
WP_000057285.1|532953_533349_+	YraN family protein	NA	NA	NA	NA	NA
WP_000893481.1|533370_533961_+	DnaA initiator-associating protein DiaA	NA	A0A067XQR2	Caulobacter_phage	31.9	7.1e-12
WP_000643280.1|533970_534546_+	divisome-associated lipoprotein YraP	NA	NA	NA	NA	NA
WP_001517952.1|534612_535248_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_000037599.1|535378_535897_+	protein/nucleic acid deglycase	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	28.2	9.0e-11
WP_000380404.1|535876_536320_-	YhbP family protein	NA	NA	NA	NA	NA
WP_000928379.1|536357_536675_+	GIY-YIG nuclease family protein	NA	S6DF82	Invertebrate_iridovirus	50.0	8.4e-12
>prophage 41
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	542455	544345	4755838		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_000807244.1|542455_544345_-	ATP-dependent RNA helicase DeaD	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	30.8	7.7e-52
>prophage 42
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	549880	556537	4755838		Cafeteria_roenbergensis_virus(50.0%)	4	NA	NA
WP_000133064.1|549880_552559_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	26.3	1.9e-24
WP_001031038.1|552583_554086_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000105461.1|554113_554566_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_000207649.1|555193_556537_+	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	93.7	4.8e-64
>prophage 43
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	560007	562894	4755838	protease	Pandoravirus(50.0%)	2	NA	NA
WP_000764711.1|560007_560856_-	dihydropteroate synthase	NA	S4W084	Pandoravirus	30.3	1.4e-21
WP_001107481.1|560959_562894_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	G8DDJ2	Micromonas_pusilla_virus	43.3	9.2e-117
>prophage 44
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	569616	571107	4755838		Indivirus(50.0%)	2	NA	NA
WP_001047354.1|569616_570588_+	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	25.8	7.8e-08
WP_000444168.1|570819_571107_+	DNA-binding transcriptional regulator SfsB	NA	A0A2I7S995	Vibrio_phage	68.7	3.5e-17
>prophage 45
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	575215	590121	4755838		Staphylococcus_phage(28.57%)	17	NA	NA
WP_000531566.1|575215_576028_-	phospholipid ABC transporter ATP-binding protein MlaF	NA	G3M9Y6	Bacillus_virus	30.2	9.7e-20
WP_000922736.1|576240_577218_+	calcium/sodium antiporter	NA	NA	NA	NA	NA
WP_000018617.1|577231_578218_+	arabinose-5-phosphate isomerase KdsD	NA	A0A2P0VNK5	Tetraselmis_virus	31.2	1.1e-38
WP_000030021.1|578238_578805_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	74.3	2.7e-53
WP_000047845.1|578801_579377_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_000669770.1|579345_579900_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
WP_000224104.1|579906_580632_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	7.1e-22
WP_000809020.1|580679_582113_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_001176589.1|582135_582423_+	ribosome hibernation promoting factor	NA	NA	NA	NA	NA
WP_000609332.1|582540_583032_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_000243749.1|583077_583932_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.4	1.4e-05
WP_000216797.1|583928_584201_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA	NA
WP_000602196.1|584449_585082_+	PhoP regulatory network protein YrbL	NA	NA	NA	NA	NA
WP_000044652.1|585156_585885_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_000719811.1|585881_586535_-	isoprenoid biosynthesis glyoxalase ElbB	NA	NA	NA	NA	NA
WP_000809820.1|586761_589098_-	aerobic respiration two-component sensor histidine kinase ArcB	NA	A0A1V0SGX0	Hokovirus	30.6	3.5e-38
WP_001176879.1|589191_590121_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	34.2	1.5e-16
>prophage 46
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	602781	606816	4755838	protease	Burkholderia_virus(50.0%)	4	NA	NA
WP_000108071.1|602781_604272_-	sialic acid transporter NanT	NA	Q6JIH2	Burkholderia_virus	21.9	2.7e-07
WP_001029665.1|604387_605281_-	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
WP_000382922.1|605415_606207_-	transcriptional regulator NanR	NA	NA	NA	NA	NA
WP_000366112.1|606315_606816_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	55.8	2.5e-26
>prophage 47
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	611684	613052	4755838	protease	uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000716690.1|611684_613052_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.3	2.7e-22
>prophage 48
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	620046	621315	4755838		Oenococcus_phage(100.0%)	1	NA	NA
WP_000433395.1|620046_621315_-	SLC13/DASS family transporter	NA	Q6A201	Oenococcus_phage	33.0	3.3e-59
>prophage 49
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	639767	640811	4755838		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_000913396.1|639767_640811_-	rod shape-determining protein MreB	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
>prophage 50
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	652895	656277	4755838		Ostreococcus_lucimarinus_virus(50.0%)	3	NA	NA
WP_000642611.1|652895_653780_+	adenine-specific DNA-methyltransferase	NA	M4QNN5	Ostreococcus_lucimarinus_virus	32.8	1.3e-25
WP_000620015.1|653862_654027_+	DUF2556 family protein	NA	NA	NA	NA	NA
WP_001145328.1|654177_656277_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	G3MA91	Bacillus_virus	33.9	8.4e-23
>prophage 51
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	670318	674638	4755838	tRNA	Pandoravirus(33.33%)	6	NA	NA
WP_001063615.1|670318_670891_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	S4VW33	Pandoravirus	27.3	1.3e-10
WP_001129708.1|670895_671438_-	DNA topoisomerase	NA	NA	NA	NA	NA
WP_000460663.1|671464_671938_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_000124529.1|671909_673034_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000114987.1|673165_673675_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.1	6.7e-19
WP_001285165.1|673690_674638_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.9	8.4e-07
>prophage 52
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	694531	700102	4755838		Tupanvirus(33.33%)	7	NA	NA
WP_000031748.1|694531_695716_-	elongation factor Tu	NA	A0A2K9L516	Tupanvirus	26.5	2.6e-13
WP_000124693.1|695787_697902_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.5	8.1e-58
WP_001138042.1|697998_698469_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_000246815.1|698564_698939_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000903400.1|699064_699352_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_000820705.1|699359_699716_-	sulfurtransferase complex subunit TusC	NA	NA	NA	NA	NA
WP_001268006.1|699715_700102_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	40.6	6.0e-20
>prophage 53
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	706063	707971	4755838		Tupanvirus(100.0%)	1	NA	NA
WP_000634767.1|706063_707971_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	33.7	6.5e-75
>prophage 54
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	712556	716553	4755838		environmental_Halophage(50.0%)	3	NA	NA
WP_000269311.1|712556_714644_+	membrane protein	NA	H9YQA8	environmental_Halophage	89.1	4.2e-67
WP_000190023.1|714686_715904_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000601886.1|715989_716553_-	aminodeoxychorismate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	55.3	6.0e-61
>prophage 55
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	734183	735020	4755838		Vibrio_phage(100.0%)	1	NA	NA
WP_000742132.1|734183_735020_-	adenine-specific DNA-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	48.7	1.9e-66
>prophage 56
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	752060	755823	4755838		Bacillus_phage(66.67%)	3	NA	NA
WP_001265689.1|752060_753680_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	53.3	1.2e-141
WP_001253817.1|753754_755107_-	two-component system sensor histidine kinase EnvZ	NA	W8CYF6	Bacillus_phage	22.9	1.2e-11
WP_001157751.1|755103_755823_-	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	34.7	3.5e-29
>prophage 57
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	762435	763350	4755838	transposase	Sodalis_phage(100.0%)	1	NA	NA
WP_000235946.1|762435_763350_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	45.5	3.7e-68
>prophage 58
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	769410	771804	4755838		Iris_mild_mosaic_virus(100.0%)	1	NA	NA
WP_000082248.1|769410_771804_-	maltodextrin phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	40.2	3.6e-14
>prophage 59
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	787638	790086	4755838		Dickeya_phage(100.0%)	1	NA	NA
WP_000993424.1|787638_790086_-	glycogen phosphorylase	NA	A0A140XAG6	Dickeya_phage	82.1	3.6e-33
>prophage 60
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	811483	813291	4755838		Enterococcus_phage(50.0%)	2	NA	NA
WP_000073536.1|811483_812224_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	24.6	1.6e-08
WP_000907845.1|812220_813291_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	32.5	2.0e-20
>prophage 61
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	816702	818903	4755838		Streptococcus_phage(33.33%)	4	NA	NA
WP_000174966.1|816702_817071_-	type II toxin-antitoxin system death-on-curing family toxin	NA	E4ZFM2	Streptococcus_phage	28.1	9.5e-07
WP_001535398.1|817067_817289_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_000416114.1|817420_818134_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF	NA	G9BWD6	Planktothrix_phage	30.7	3.7e-15
WP_000082083.1|818135_818903_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.4	7.5e-14
>prophage 62
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	824694	836357	4755838		Dickeya_phage(28.57%)	12	NA	NA
WP_000159621.1|824694_825549_-	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	42.3	7.0e-45
WP_001081707.1|825794_826850_-	cell division protein FtsX	NA	NA	NA	NA	NA
WP_000617729.1|826842_827511_-	cell division ATP-binding protein FtsE	NA	A0A2H4PQG7	Staphylococcus_phage	24.6	1.9e-13
WP_001118694.1|827513_828989_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_000743275.1|829114_829711_+	16S rRNA (guanine(966)-N(2))-methyltransferase	NA	NA	NA	NA	NA
WP_000906759.1|829700_829970_+	DUF1145 family protein	NA	NA	NA	NA	NA
WP_000042857.1|829991_830363_-	DUF2500 domain-containing protein	NA	NA	NA	NA	NA
WP_000964735.1|830504_831131_+	lysoplasmalogenase	NA	A0A140XAH6	Dickeya_phage	64.6	3.8e-32
WP_000106643.1|831211_833410_+	Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA	NA	E4ZFI9	Streptococcus_phage	36.0	6.5e-111
WP_000789684.1|833609_835253_+	methyl-accepting chemotaxis citrate transducer	NA	A0A2H4J162	uncultured_Caudovirales_phage	28.1	1.1e-09
WP_001541054.1|835276_835522_-	sulfurtransferase TusA	NA	A0A140XB86	Dickeya_phage	83.3	6.1e-10
WP_001519906.1|835691_836357_+	7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter	NA	A0A2I7SAW6	Vibrio_phage	54.9	2.8e-57
>prophage 63
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	841725	844467	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000202488.1|841725_844467_-	ribosome-associated ATPase/putative transporter RbbA	NA	A0A2H4PQG7	Staphylococcus_phage	29.5	4.6e-21
>prophage 64
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	852711	854754	4755838		Indivirus(100.0%)	1	NA	NA
WP_000184168.1|852711_854754_-	oligopeptidase A	NA	A0A1V0SD92	Indivirus	23.2	3.6e-47
>prophage 65
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	869466	870366	4755838		Burkholderia_virus(100.0%)	1	NA	NA
WP_000358050.1|869466_870366_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	25.2	3.0e-06
>prophage 66
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	899095	901089	4755838		Bacillus_virus(50.0%)	2	NA	NA
WP_000103563.1|899095_900109_-	dipeptide ABC transporter ATP binding subunit DppF	NA	G3M9Y6	Bacillus_virus	28.9	9.6e-17
WP_001196509.1|900105_901089_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.3	3.3e-14
>prophage 67
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	919239	925570	4755838		Escherichia_phage(33.33%)	6	NA	NA
WP_000148471.1|919239_921573_-	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	A0A077SK27	Escherichia_phage	30.3	2.2e-72
WP_000747548.1|921725_922388_+	OmpA family lipoprotein	NA	NA	NA	NA	NA
WP_000804678.1|922606_923581_+	glyoxylate/hydroxypyruvate reductase GhrB	NA	M1HST2	Paramecium_bursaria_Chlorella_virus	27.1	5.4e-17
WP_000190524.1|923630_924341_-	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_000455790.1|924779_925070_+	HTH-type transcriptional regulator	NA	NA	NA	NA	NA
WP_000014594.1|925357_925570_+	RNA chaperone/antiterminator CspA	NA	A0A1W6JNX5	Morganella_phage	72.9	2.7e-22
>prophage 68
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	929930	930926	4755838		Escherichia_coli_O157_typing_phage(100.0%)	1	NA	NA
WP_001182586.1|929930_930926_+	acyltransferase	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	26.8	8.3e-13
>prophage 69
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	957539	959390	4755838		Tupanvirus(100.0%)	1	NA	NA
WP_000582389.1|957539_959390_-	selenocysteine-specific translation elongation factor	NA	A0A2K9KZ60	Tupanvirus	24.3	2.2e-11
>prophage 70
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	983196	992899	4755838		Rhizobium_phage(16.67%)	9	NA	NA
WP_001273795.1|983196_983448_-	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	53.4	2.2e-15
WP_001156179.1|983534_983966_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_000116579.1|984213_985758_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_001214136.1|985767_987051_+	murein hydrolase activator EnvC	NA	G9BW84	Planktothrix_phage	30.3	6.1e-08
WP_001135519.1|987054_988017_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_000798206.1|988003_989038_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	31.3	1.1e-07
WP_000645990.1|989532_990558_-	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	84.6	2.1e-19
WP_001213790.1|990567_991764_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.0	1.9e-35
WP_000587771.1|991966_992899_+	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	36.4	8.5e-36
>prophage 71
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1007987	1012541	4755838		uncultured_Mediterranean_phage(25.0%)	7	NA	NA
WP_001171884.1|1007987_1008467_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	43.8	1.2e-28
WP_001114512.1|1008494_1009304_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	F8WPX6	Bacillus_phage	31.8	1.7e-24
WP_001051798.1|1009401_1009569_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_001519051.1|1009589_1009826_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_000380125.1|1010043_1010709_-	JAB domain-containing protein	NA	NA	NA	NA	NA
WP_000050176.1|1010884_1012105_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	33.8	5.5e-43
WP_000976078.1|1012082_1012541_+	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	60.1	1.2e-48
>prophage 72
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1018518	1023544	4755838		Pseudomonas_phage(33.33%)	4	NA	NA
WP_001241851.1|1018518_1020204_-	NAD-dependent DNA ligase LigB	NA	F8SJM3	Pseudomonas_phage	21.5	6.3e-21
WP_000046966.1|1020460_1021084_+	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	35.6	2.8e-19
WP_000135058.1|1021138_1021414_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000280481.1|1021432_1023544_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA	A0A291L9W9	Bordetella_phage	34.5	4.8e-10
>prophage 73
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1028614	1030006	4755838		environmental_Halophage(100.0%)	1	NA	NA
WP_000115428.1|1028614_1030006_+	xanthine/proton symporter XanP	NA	H9YQ34	environmental_Halophage	95.9	6.7e-69
>prophage 74
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1038346	1041214	4755838		Escherichia_phage(100.0%)	1	NA	NA
WP_001143038.1|1038346_1041214_+	intestinal colonization autotransporter adhesin MisL	NA	A0A2L1IV18	Escherichia_phage	44.1	4.2e-94
>prophage 75
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1045128	1051150	4755838	transposase	Paramecium_bursaria_Chlorella_virus(33.33%)	4	NA	NA
WP_000131298.1|1045128_1047855_-	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	24.8	9.5e-35
WP_000392700.1|1048074_1048770_-	MgtC family protein	NA	G3MA03	Bacillus_virus	42.4	2.8e-15
WP_000535970.1|1049275_1050178_+	EamA family transporter	NA	NA	NA	NA	NA
WP_000749537.1|1050220_1051150_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	52.2	4.6e-66
>prophage 76
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1059515	1063997	4755838		Pandoravirus(50.0%)	5	NA	NA
WP_001270471.1|1059515_1060898_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	28.9	2.0e-41
WP_001004798.1|1060957_1062151_-	purine ribonucleoside efflux pump NepI	NA	NA	NA	NA	NA
WP_001217953.1|1062366_1062726_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_001274842.1|1062709_1063033_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_001669217.1|1063310_1063997_+	hypothetical protein	NA	A0A289ZIY5	Serratia_phage	41.3	1.6e-39
>prophage 77
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1080713	1085670	4755838		Micromonas_pusilla_virus(50.0%)	5	NA	NA
WP_000168439.1|1080713_1082402_-	acetolactate synthase large subunit	NA	G8DDL3	Micromonas_pusilla_virus	30.7	4.2e-57
WP_001541152.1|1082508_1082607_-	ilvB operon leader peptide IvbL	NA	NA	NA	NA	NA
WP_000117642.1|1083240_1083330_+	type I toxin-antitoxin system toxin TisB	NA	NA	NA	NA	NA
WP_001531658.1|1083422_1084283_+	EamA family transporter	NA	NA	NA	NA	NA
WP_000828737.1|1084485_1085670_+	multidrug efflux MFS transporter EmrD	NA	S4TR35	Salmonella_phage	24.1	1.7e-12
>prophage 78
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1094173	1095125	4755838		Synechococcus_phage(50.0%)	2	NA	NA
WP_001246919.1|1094173_1094602_-	heat shock chaperone IbpB	NA	A0A1D8KPX5	Synechococcus_phage	38.2	1.7e-15
WP_001532742.1|1094711_1095125_-	heat shock chaperone IbpA	NA	A0A1D7SU06	Cyanophage	37.0	1.0e-17
>prophage 79
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1102768	1116579	4755838		Brazilian_cedratvirus(20.0%)	10	NA	NA
WP_000888546.1|1102768_1103386_-	cytochrome c biogenesis heme-transporting ATPase CcmA	NA	A0A2R8FG22	Brazilian_cedratvirus	29.8	2.4e-10
WP_000724476.1|1103391_1104792_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_000595421.1|1104981_1105614_-	molecular chaperone TorD	NA	NA	NA	NA	NA
WP_000790690.1|1105606_1108159_-	trimethylamine-N-oxide reductase TorA	NA	A0A077SK27	Escherichia_phage	31.1	8.2e-73
WP_001230248.1|1108148_1109333_-	pentaheme c-type cytochrome TorC	NA	NA	NA	NA	NA
WP_001562512.1|1109462_1110155_+	two-component system response regulator TorR	NA	W8CYM9	Bacillus_phage	28.0	3.8e-17
WP_001202045.1|1110127_1111168_-	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA	NA
WP_000106935.1|1111247_1113983_+	TMAO reductase system sensor histidine kinase/response regulator TorS	NA	A0A1V0SGX0	Hokovirus	31.2	3.6e-34
WP_000253524.1|1114008_1115346_-	MFS transporter	NA	NA	NA	NA	NA
WP_000704735.1|1115430_1116579_-	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	33.4	8.0e-52
>prophage 80
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1121427	1131218	4755838		Oenococcus_phage(25.0%)	9	NA	NA
WP_001670656.1|1121427_1122621_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	32.4	8.0e-47
WP_001054596.1|1122735_1123632_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000072047.1|1123650_1126065_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.6	2.2e-115
WP_000060085.1|1126093_1127167_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000673478.1|1127314_1128415_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	34.7	4.1e-53
WP_000059093.1|1128419_1129820_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_000831330.1|1130480_1130621_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_000239725.1|1130637_1130997_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_001307474.1|1130960_1131218_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	56.7	5.4e-17
>prophage 81
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1138212	1145104	4755838		Moraxella_phage(33.33%)	7	NA	NA
WP_001583487.1|1138212_1139550_-	adenine permease AdeP	NA	A0A0R6PHV4	Moraxella_phage	37.1	1.8e-63
WP_000078087.1|1139718_1140384_+	6-phosphogluconate phosphatase	NA	NA	NA	NA	NA
WP_000377800.1|1140478_1141204_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000063118.1|1141218_1141992_-	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	30.6	2.0e-14
WP_000212199.1|1142078_1142969_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_000741630.1|1142968_1143928_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA	NA
WP_000867131.1|1144063_1145104_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	35.9	1.2e-46
>prophage 82
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1149512	1152901	4755838		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334051.1|1149512_1151342_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	43.2	1.8e-130
WP_000934851.1|1151530_1152901_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	38.7	8.7e-37
>prophage 83
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1165785	1166778	4755838		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
WP_000845085.1|1165785_1166778_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	37.3	4.2e-49
>prophage 84
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1170071	1174089	4755838		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_000102338.1|1170071_1171940_+	low affinity potassium transporter Kup	NA	M1I6H8	Paramecium_bursaria_Chlorella_virus	30.6	1.5e-63
WP_000715944.1|1172156_1172576_+	D-ribose pyranase	NA	NA	NA	NA	NA
WP_000339359.1|1172583_1174089_+	ribose ABC transporter ATP-binding protein RbsA	NA	A0A2H4PQG7	Staphylococcus_phage	24.6	5.1e-14
>prophage 85
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1189479	1191126	4755838		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_001012557.1|1189479_1191126_+	acetolactate synthase 2 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	1.2e-64
>prophage 86
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1196486	1196828	4755838		Pseudomonas_phage(100.0%)	1	NA	NA
WP_000560824.1|1196486_1196828_+	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	38.5	1.7e-05
>prophage 87
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1200267	1205688	4755838		Bacillus_phage(33.33%)	4	NA	NA
WP_001238835.1|1200267_1202292_+	DNA helicase Rep	NA	A7KV33	Bacillus_phage	37.3	1.4e-112
WP_001089447.1|1202331_1203813_-	guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA	NA	NA	NA	NA
WP_000047525.1|1203949_1205215_-	ATP-dependent RNA helicase RhlB	NA	E3T5E1	Cafeteria_roenbergensis_virus	31.7	3.7e-42
WP_001280776.1|1205358_1205688_+	thioredoxin TrxA	NA	A0A1V0SD63	Indivirus	38.5	4.2e-14
>prophage 88
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1209812	1215316	4755838		Enterobacteria_phage(40.0%)	6	NA	NA
WP_000866685.1|1209812_1210943_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	27.7	2.3e-27
WP_000011225.1|1210939_1212202_+	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	M1H3J6	Paramecium_bursaria_Chlorella_virus	27.0	9.2e-25
WP_000822152.1|1212201_1213269_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.8	3.1e-98
WP_000676080.1|1213301_1213526_+	sugar nucleotidyltransferase	NA	I7I009	Enterobacteria_phage	52.2	2.0e-07
WP_001145157.1|1213503_1214181_+	dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase	NA	NA	NA	NA	NA
WP_000612080.1|1214185_1215316_+	dTDP-4-amino-4,6-dideoxygalactose transaminase	NA	A0A0F7LAY0	uncultured_marine_virus	40.9	3.3e-18
>prophage 89
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1232754	1236671	4755838		Bacillus_phage(100.0%)	3	NA	NA
WP_000132877.1|1232754_1233657_+	tyrosine recombinase XerC	NA	A0A142F1N9	Bacillus_phage	31.0	7.7e-26
WP_001213560.1|1233656_1234373_+	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB	NA	NA	NA	NA	NA
WP_000383436.1|1234508_1236671_+	DNA helicase II	NA	A7KV33	Bacillus_phage	37.1	1.7e-116
>prophage 90
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1241547	1243377	4755838		Catovirus(100.0%)	1	NA	NA
WP_001533487.1|1241547_1243377_+	ATP-dependent DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	37.4	2.6e-81
>prophage 91
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1257609	1261044	4755838		Ostreococcus_lucimarinus_virus(50.0%)	4	NA	NA
WP_000187559.1|1257609_1259250_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	M4R0M8	Ostreococcus_lucimarinus_virus	28.5	3.4e-40
WP_000508972.1|1259455_1259710_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA	NA
WP_000459612.1|1259713_1260262_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA	NA
WP_000257554.1|1260264_1261044_+	Sec-independent protein translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	30.7	1.5e-25
>prophage 92
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1271970	1272585	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_000378894.1|1271970_1272585_+	IMPACT family protein	NA	A0A1X9I5T8	Streptococcus_phage	39.3	8.1e-19
>prophage 93
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1284917	1287704	4755838		Enterococcus_phage(100.0%)	1	NA	NA
WP_000249972.1|1284917_1287704_+	DNA polymerase I	NA	A0A0C5K9B9	Enterococcus_phage	27.0	1.3e-47
>prophage 94
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1293061	1294111	4755838		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
WP_000146195.1|1293061_1294111_-	nitrogen regulation protein NR(II)	NA	Q8QKV7	Ectocarpus_siliculosus_virus	26.1	1.2e-09
>prophage 95
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1308292	1410677	4755838	terminase,protease,portal,head,tail,plate,integrase,lysis,tRNA,capsid,holin	Enterobacteria_phage(47.83%)	117	1345959:1346003	1380778:1380822
WP_000268249.1|1308292_1309189_-	sulfolactaldehyde 3-reductase	NA	D2K0C8	Staphylococcus_phage	99.2	9.9e-66
WP_001520529.1|1309353_1310250_+	sugar kinase	NA	NA	NA	NA	NA
WP_000059693.1|1310283_1311087_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.8	7.6e-25
WP_000965695.1|1311277_1311877_+	glucose-1-phosphatase	NA	NA	NA	NA	NA
WP_000921423.1|1311870_1312743_+	virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_000560969.1|1312739_1313177_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_001518251.1|1313221_1314163_+	fatty acid biosynthesis protein FabY	NA	NA	NA	NA	NA
WP_001259011.1|1314177_1314624_-	type II toxin-antitoxin system HigA family antitoxin	NA	NA	NA	NA	NA
WP_000558166.1|1314620_1314932_-	type II toxin-antitoxin system HigB family toxin	NA	NA	NA	NA	NA
WP_001127704.1|1315017_1315947_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001159630.1|1316164_1316476_+	cytotoxic translational repressor of toxin-antitoxin stability system	NA	NA	NA	NA	NA
WP_000362050.1|1316476_1316767_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000027730.1|1316813_1317743_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA	NA
WP_000829025.1|1317739_1318375_-	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_000331364.1|1318371_1319274_-	formate dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_077248424.1|1319286_1322337_-	formate dehydrogenase-N subunit alpha	NA	A0A077SK27	Escherichia_phage	24.1	4.6e-06
WP_001059744.1|1322531_1323368_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_000710967.1|1323635_1324667_-	YiiG family protein	NA	NA	NA	NA	NA
WP_000828039.1|1324849_1325950_+	DUF3829 domain-containing protein	NA	NA	NA	NA	NA
WP_000527677.1|1326292_1326616_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_000683586.1|1326615_1327275_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_001517951.1|1327375_1327924_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000619474.1|1328012_1328327_-	L-rhamnose mutarotase	NA	NA	NA	NA	NA
WP_000009249.1|1328323_1329472_-	lactaldehyde reductase	NA	NA	NA	NA	NA
WP_001179685.1|1329598_1330426_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA	NA
WP_000211454.1|1330568_1331828_-	L-rhamnose isomerase	NA	NA	NA	NA	NA
WP_000143957.1|1331824_1333294_-	rhamnulokinase	NA	NA	NA	NA	NA
WP_000217112.1|1333581_1334418_+	HTH-type transcriptional activator RhaS	NA	NA	NA	NA	NA
WP_000013290.1|1334570_1335419_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA	NA
WP_000063541.1|1335415_1336450_-	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA	NA
WP_000378721.1|1337068_1337752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000566800.1|1337910_1339218_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_001091413.1|1339210_1339726_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_000812816.1|1339744_1340728_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000122632.1|1341056_1341677_+	superoxide dismutase [Mn]	NA	Q56AR7	Bacillus_thuringiensis_phage	58.9	2.4e-63
WP_077906285.1|1341683_1342436_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA	NA
WP_000133442.1|1342447_1342843_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_000338672.1|1342963_1343167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000580402.1|1343214_1344588_-	envelope stress sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.6	7.2e-15
WP_001033731.1|1344584_1345283_-	envelope stress response regulator transcription factor CpxR	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
WP_001233463.1|1345433_1345934_+	cell-envelope stress modulator CpxP	NA	NA	NA	NA	NA
1345959:1346003	attL	CACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATC	NA	NA	NA	NA
WP_000023410.1|1346110_1347091_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0M4RTQ0	Salmonella_phage	100.0	3.8e-188
WP_099706372.1|1347160_1347514_-	helix-turn-helix transcriptional regulator	NA	A0A0M5M1I9	Salmonella_phage	100.0	1.2e-59
WP_144401883.1|1347663_1348047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000422421.1|1347997_1348453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031607754.1|1348591_1348873_+	hypothetical protein	NA	A0A0M4RCW1	Salmonella_phage	100.0	1.4e-50
WP_000078935.1|1348883_1349087_+	hypothetical protein	NA	A0A0M3ULI0	Salmonella_phage	98.5	1.2e-30
WP_000290619.1|1349097_1349304_+	DUF4761 family protein	NA	A0A0M5M1I3	Salmonella_phage	100.0	4.3e-33
WP_000543629.1|1349293_1349524_+	DUF2724 domain-containing protein	NA	A0A0M4S6M9	Salmonella_phage	76.0	1.2e-28
WP_000482341.1|1349618_1350053_+	tellurite resistance TerB family protein	NA	Q1MVI3	Enterobacteria_phage	91.0	5.1e-68
WP_000946669.1|1350052_1350235_+	DUF3927 family protein	NA	NA	NA	NA	NA
WP_000166617.1|1350277_1350490_+	hypothetical protein	NA	A0A0M4R514	Salmonella_phage	95.7	6.4e-32
WP_000620901.1|1350491_1351373_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A0M4QWR0	Salmonella_phage	82.3	6.6e-131
WP_000237442.1|1351372_1351570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000128157.1|1351570_1352605_+	DNA cytosine methyltransferase	NA	A0A0M3ULA1	Salmonella_phage	61.9	5.6e-129
WP_000205480.1|1352601_1354974_+	replication endonuclease	NA	A0A0M4RTM8	Salmonella_phage	80.8	0.0e+00
WP_000248601.1|1355111_1356194_+	AAA family ATPase	NA	R4TQL5	Phaeocystis_globosa_virus	29.1	3.2e-18
WP_000970614.1|1356190_1358395_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_000549080.1|1358528_1358726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000087878.1|1358863_1359913_-|portal	phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	73.6	3.9e-154
WP_000613740.1|1359912_1361646_-	helix-turn-helix domain-containing protein	NA	A0A0A7NV54	Enterobacteria_phage	75.0	3.8e-263
WP_000534194.1|1361802_1362639_+|capsid	GPO family capsid scaffolding protein	capsid	A0A0A7NRY7	Enterobacteria_phage	65.5	5.7e-100
WP_001104935.1|1362662_1363748_+|capsid	phage major capsid protein, P2 family	capsid	A0A0A7NQ82	Enterobacteria_phage	68.1	2.9e-136
WP_000957241.1|1363794_1364625_+|terminase	terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	65.5	1.4e-90
WP_000525914.1|1364726_1365221_+|head	head completion/stabilization protein	head	A0A0A7NPU2	Enterobacteria_phage	60.1	2.9e-51
WP_000864914.1|1365220_1365421_+|tail	tail protein	tail	A0A0A7NV57	Enterobacteria_phage	80.0	1.3e-21
WP_024135764.1|1365450_1365789_+|holin	phage holin, lambda family	holin	NA	NA	NA	NA
WP_000703028.1|1365785_1366229_+	lysozyme	NA	A0A075B8L0	Enterobacteria_phage	63.9	1.1e-44
WP_001082760.1|1366235_1366727_+|lysis	lysis protein	lysis	S4TNN7	Salmonella_phage	56.2	1.3e-32
WP_000411526.1|1366713_1367190_+|tail	phage tail protein	tail	A0A0A7NPU6	Enterobacteria_phage	49.7	9.3e-39
WP_129361509.1|1367195_1367822_+	phage virion morphogenesis protein	NA	A0A0A7NV60	Enterobacteria_phage	59.9	8.4e-64
WP_000991118.1|1367818_1368409_+|plate	phage baseplate assembly protein V	plate	A0A0A7NRZ3	Enterobacteria_phage	69.4	3.7e-69
WP_000127183.1|1368405_1368774_+|plate	baseplate assembly protein	plate	A0A0A7NQ90	Enterobacteria_phage	71.3	2.9e-40
WP_001143449.1|1368760_1369657_+|plate	baseplate assembly protein	plate	A0A0A7NPY5	Enterobacteria_phage	69.1	8.9e-107
WP_001058140.1|1369649_1370177_+|tail	phage tail protein I	tail	A0A0A7NPV1	Enterobacteria_phage	61.2	1.1e-56
WP_001110720.1|1370182_1372174_+|tail	tail protein	tail	Q6K1H2	Salmonella_virus	48.7	1.3e-169
WP_001179596.1|1372185_1372857_+	DUF4376 domain-containing protein	NA	S5MBX6	Escherichia_phage	63.8	2.2e-78
WP_000033281.1|1372966_1373341_+	DUF1353 domain-containing protein	NA	I1TQ41	Pseudomonas_phage	37.4	6.2e-14
WP_000980424.1|1373360_1373849_-|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	79.5	1.5e-71
WP_000792680.1|1373862_1376823_-|tail	phage tail tape measure protein	tail	A0A0A7NRZ9	Enterobacteria_phage	51.2	2.1e-253
WP_024135765.1|1376809_1376974_-|tail	GpE family phage tail protein	tail	A0A0A7NQ96	Enterobacteria_phage	79.6	1.4e-15
WP_129361508.1|1376973_1377297_-|tail	phage tail protein	tail	A0A0A7NPZ0	Enterobacteria_phage	55.1	1.2e-16
WP_000115856.1|1377372_1377885_-|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	68.0	7.6e-63
WP_000003578.1|1377885_1379073_-|tail	phage tail sheath family protein	tail	A0A0A7NV69	Enterobacteria_phage	81.7	1.1e-184
WP_000189108.1|1379231_1380362_+	phage late control D family protein	NA	A0A0A7NQ97	Enterobacteria_phage	79.8	2.3e-160
WP_001672062.1|1380407_1380665_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA	NA
WP_001077320.1|1380900_1381803_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA	NA
1380778:1380822	attR	CACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATC	NA	NA	NA	NA
WP_000591793.1|1381987_1382950_+	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_000758711.1|1383153_1384143_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000750762.1|1384243_1384999_+	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA	NA
WP_000777320.1|1385261_1386596_+	MFS transporter	NA	NA	NA	NA	NA
WP_000646510.1|1386606_1387566_+	aminoimidazole riboside kinase	NA	NA	NA	NA	NA
WP_000557881.1|1387575_1388616_+	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA	NA
WP_001519915.1|1388678_1389401_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000621104.1|1389678_1389810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001173080.1|1389899_1390250_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_000113085.1|1390263_1391856_-	autoinducer-2 kinase	NA	NA	NA	NA	NA
WP_001283049.1|1391942_1392902_-	transcriptional regulator LsrR	NA	NA	NA	NA	NA
WP_001167248.1|1393157_1394693_+	autoinducer 2 ABC transporter ATP-binding protein LsrA	NA	A0A2H4PQG7	Staphylococcus_phage	30.0	6.3e-20
WP_000911133.1|1394686_1395730_+	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA	NA
WP_000981826.1|1395726_1396728_+	autoinducer 2 ABC transporter permease LsrD	NA	NA	NA	NA	NA
WP_000090737.1|1396756_1397779_+	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA	NA
WP_000774146.1|1397807_1398683_+	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA	NA
WP_001543603.1|1398765_1399056_+	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA	NA
WP_001088053.1|1399065_1399830_+	epimerase	NA	NA	NA	NA	NA
WP_001216339.1|1399921_1400689_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_000802242.1|1400801_1401398_-	YiiQ family protein	NA	NA	NA	NA	NA
WP_000155229.1|1401498_1401927_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_000796293.1|1402032_1402779_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
WP_001250617.1|1402875_1403886_-	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_000136809.1|1403997_1405506_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_000084285.1|1405526_1406372_-	aquaporin	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	28.6	2.0e-15
WP_000051370.1|1406770_1407010_+	septal ring assembly protein ZapB	NA	NA	NA	NA	NA
WP_000872918.1|1407231_1407717_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
WP_000139637.1|1407809_1408739_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_001293360.1|1408805_1410137_-	HslU--HslV peptidase ATPase subunit	NA	W6AS21	Erwinia_phage	28.3	2.4e-44
WP_000208240.1|1410146_1410677_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 96
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1433488	1436663	4755838		Synechococcus_phage(50.0%)	2	NA	NA
WP_000424866.1|1433488_1434151_-	fructose-6-phosphate aldolase	NA	A0A0E3F0E2	Synechococcus_phage	34.1	2.5e-29
WP_001128485.1|1434161_1436663_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	27.4	6.1e-12
>prophage 97
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1457778	1459623	4755838		Acinetobacter_phage(100.0%)	1	NA	NA
WP_000591399.1|1457778_1459623_+	TonB-dependent vitamin B12 receptor BtuB	NA	A0A0P0I887	Acinetobacter_phage	30.0	2.2e-11
>prophage 98
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1468263	1471357	4755838		uncultured_Mediterranean_phage(50.0%)	3	NA	NA
WP_000023068.1|1468263_1469214_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	32.5	7.9e-29
WP_001541267.1|1469422_1469596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000031748.1|1470172_1471357_+	elongation factor Tu	NA	A0A2K9L516	Tupanvirus	26.5	2.6e-13
>prophage 99
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1475477	1483806	4755838		Chrysochromulina_ericina_virus(50.0%)	2	NA	NA
WP_000263105.1|1475477_1479506_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	29.0	9.4e-23
WP_000653965.1|1479582_1483806_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	27.1	5.0e-67
>prophage 100
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1487357	1488116	4755838		Catovirus(100.0%)	1	NA	NA
WP_000999777.1|1487357_1488116_-	thiazole biosynthesis adenylyltransferase ThiF	NA	A0A1V0SAV8	Catovirus	29.7	2.4e-12
>prophage 101
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1493471	1495234	4755838		Klosneuvirus(50.0%)	3	NA	NA
WP_000362363.1|1493471_1494143_+	deoxyribonuclease V	NA	A0A1V0SJW5	Klosneuvirus	28.7	1.6e-20
WP_000940092.1|1494184_1494775_+	YjaG family protein	NA	NA	NA	NA	NA
WP_001044509.1|1494961_1495234_+	DNA-binding protein HU-alpha	NA	A7KV42	Bacillus_phage	57.8	5.5e-20
>prophage 102
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1500718	1502308	4755838		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_001187513.1|1500718_1502308_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.1	1.1e-67
>prophage 103
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1516589	1520273	4755838		Dickeya_phage(100.0%)	1	NA	NA
WP_000095969.1|1516589_1520273_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	90.2	1.7e-26
>prophage 104
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1529444	1547597	4755838	plate,tail	Burkholderia_phage(45.0%)	23	NA	NA
WP_001177098.1|1529444_1529960_-|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	40.7	1.3e-33
WP_000368212.1|1529969_1531451_-|tail	tail fiber protein	tail	A0A0M3ULF6	Salmonella_phage	52.7	1.6e-52
WP_000359503.1|1531453_1532086_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
WP_000951728.1|1532078_1533194_-|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	52.2	5.3e-101
WP_001093501.1|1533184_1533544_-|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_000632052.1|1533707_1535255_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	30.4	1.6e-50
WP_000703634.1|1535254_1536184_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	83.8	6.7e-150
WP_000593184.1|1536180_1536543_-	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
WP_000679396.1|1536866_1537589_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	2.3e-12
WP_000818152.1|1537598_1538642_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	45.1	3.2e-76
WP_001269716.1|1538629_1538839_-	membrane protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000271429.1|1538838_1539792_-	chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	2.3e-36
WP_001262484.1|1539791_1542146_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.8	2.8e-67
WP_001185656.1|1542242_1542371_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001003640.1|1542330_1542648_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_000907495.1|1542699_1543224_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_000729849.1|1543223_1544651_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.8e-194
WP_000875314.1|1544640_1544838_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449433.1|1544834_1545290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777266.1|1545449_1545764_-	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_001270441.1|1545776_1546382_-	transglycosylase SLT domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	2.5e-60
WP_001226442.1|1546384_1546672_-	membrane protein	NA	Q6QIC8	Burkholderia_phage	49.1	2.3e-16
WP_000615248.1|1547249_1547597_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
>prophage 105
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1560140	1561250	4755838		Mycoplasma_phage(100.0%)	1	NA	NA
WP_000179176.1|1560140_1561250_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
>prophage 106
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1568508	1569117	4755838		Lactococcus_phage(100.0%)	1	NA	NA
WP_000646079.1|1568508_1569117_+	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
>prophage 107
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1575851	1578378	4755838		Salmonella_phage(50.0%)	2	NA	NA
WP_000918353.1|1575851_1577267_+	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	78.4	7.0e-199
WP_001147301.1|1577298_1578378_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	29.1	8.9e-29
>prophage 108
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1582473	1586077	4755838		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_000357724.1|1582473_1585299_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.7	0.0e+00
WP_000168322.1|1585546_1586077_+	single-stranded DNA-binding protein SSB1	NA	A0A0A0P1Q9	Enterobacteria_phage	88.9	3.9e-54
>prophage 109
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1608453	1610520	4755838		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_000358566.1|1608453_1610520_+	peptidase domain-containing ABC transporter	NA	F2Y2R6	Organic_Lake_phycodnavirus	23.7	6.3e-15
>prophage 110
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1615406	1616756	4755838		Moraxella_phage(100.0%)	1	NA	NA
WP_000106907.1|1615406_1616756_+	guanine/hypoxanthine transporter GhxP	NA	A0A0R6PHV4	Moraxella_phage	71.4	6.7e-159
>prophage 111
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1622974	1624933	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000083877.1|1622974_1624933_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.2	2.2e-89
>prophage 112
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1634543	1642903	4755838		Escherichia_phage(25.0%)	8	NA	NA
WP_011233236.1|1634543_1636691_-	formate dehydrogenase H subunit alpha, selenocysteine-containing	NA	A0A077SK27	Escherichia_phage	24.5	1.0e-31
WP_000457029.1|1637045_1637954_-	lipid A hydroxylase LpxO	NA	H8ZJK8	Ostreococcus_tauri_virus	37.1	5.9e-34
WP_000602438.1|1638211_1638676_-	aminoalkylphosphonate N-acetyltransferase	NA	NA	NA	NA	NA
WP_001131299.1|1638797_1639241_-	VOC family metalloprotein YjdN	NA	NA	NA	NA	NA
WP_000056482.1|1639360_1639696_-	phnA family protein	NA	NA	NA	NA	NA
WP_000919710.1|1640163_1641666_+	glycine betaine/L-proline transporter ProP	NA	Q6JIH2	Burkholderia_virus	30.5	3.5e-55
WP_000844399.1|1641735_1641825_+	LpxT activity modulator PmrR	NA	NA	NA	NA	NA
WP_001212189.1|1641832_1642903_-	two-component system sensor histidine kinase PmrB	NA	W8CYF6	Bacillus_phage	25.3	6.0e-09
>prophage 113
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1661092	1665596	4755838		Escherichia_phage(100.0%)	4	NA	NA
WP_000403489.1|1661092_1663522_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	81.3	0.0e+00
WP_000816143.1|1663535_1664162_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	92.3	2.9e-120
WP_000544932.1|1664154_1664928_+	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	79.5	3.9e-103
WP_077906100.1|1664942_1665596_+	molecular chaperone	NA	A0A077SLS7	Escherichia_phage	72.4	2.7e-81
>prophage 114
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1672633	1672954	4755838		Sodalis_phage(100.0%)	1	NA	NA
WP_001538057.1|1672633_1672954_-	hypothetical protein	NA	Q2A0A7	Sodalis_phage	61.1	1.1e-24
>prophage 115
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1692278	1694262	4755838		Cronobacter_phage(50.0%)	2	NA	NA
WP_000027827.1|1692278_1692572_+	co-chaperone GroES	NA	K4F9I2	Cronobacter_phage	43.3	1.2e-12
WP_000729126.1|1692615_1694262_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	68.7	1.2e-189
>prophage 116
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1699345	1699879	4755838		Morganella_phage(100.0%)	1	NA	NA
WP_001238396.1|1699345_1699879_-	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	54.8	9.4e-48
>prophage 117
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1703606	1704584	4755838		Tupanvirus(100.0%)	1	NA	NA
WP_000004797.1|1703606_1704584_+	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9KZX5	Tupanvirus	29.1	1.7e-26
>prophage 118
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1712308	1712854	4755838		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001271546.1|1712308_1712854_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	41.6	4.5e-29
>prophage 119
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1717636	1720822	4755838		Vibrio_phage(50.0%)	2	NA	NA
WP_000640375.1|1717636_1718956_+	N-acetylmuramoyl-L-alanine amidase AmiB	NA	A0A067ZJB6	Vibrio_phage	29.2	1.8e-15
WP_001122531.1|1718965_1720822_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	42.1	1.2e-60
>prophage 120
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1726367	1730774	4755838		Pithovirus(50.0%)	3	NA	NA
WP_000527960.1|1726367_1727666_+	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	35.9	2.2e-66
WP_001177632.1|1727872_1728298_+	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA	NA
WP_000076358.1|1728335_1730774_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.3	2.6e-68
>prophage 121
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1735638	1736802	4755838		Ralstonia_phage(100.0%)	1	NA	NA
WP_000943943.1|1735638_1736802_+	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	44.0	8.9e-83
>prophage 122
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1774841	1776597	4755838		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
WP_000055079.1|1774841_1775372_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	63.3	4.2e-56
WP_000853764.1|1775598_1776597_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	42.4	1.3e-69
>prophage 123
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1788530	1791870	4755838		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_000212724.1|1788530_1788773_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	51.2	5.6e-16
WP_000220579.1|1788762_1789047_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	69.1	1.9e-31
WP_001009175.1|1789050_1789515_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	NA	K4F9T1	Cronobacter_phage	55.8	2.7e-51
WP_000187821.1|1789731_1791870_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	64.7	6.9e-267
>prophage 124
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1795536	1801537	4755838		Enterobacteria_phage(33.33%)	6	NA	NA
WP_001181297.1|1795536_1796484_-	HTH-type transcriptional regulator TreR	NA	C6ZCU4	Enterobacteria_phage	21.5	1.2e-13
WP_105789234.1|1796628_1796727_+	mgtA regulatory leader peptide MgtL	NA	NA	NA	NA	NA
WP_000920863.1|1796867_1799576_+	magnesium-translocating P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	25.8	2.6e-45
WP_000047544.1|1799664_1800051_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_000148570.1|1800127_1800589_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_000013055.1|1800601_1801537_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	39.2	6.5e-52
>prophage 125
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1813644	1818591	4755838	tRNA	Klosneuvirus(50.0%)	3	NA	NA
WP_000416334.1|1813644_1816500_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.5	9.3e-142
WP_001523689.1|1816499_1816943_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_000397158.1|1817079_1818591_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.7	8.3e-49
>prophage 126
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1826399	1829154	4755838	integrase	Acanthamoeba_polyphaga_mimivirus(50.0%)	2	1822829:1822843	1830059:1830073
1822829:1822843	attL	GATAAAAACAATCAT	NA	NA	NA	NA
WP_000152553.1|1826399_1827419_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	29.9	1.7e-42
WP_000772669.1|1827888_1829154_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	40.4	1.4e-73
1830059:1830073	attR	ATGATTGTTTTTATC	NA	NA	NA	NA
>prophage 127
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1833204	1839389	4755838		Enterobacteria_phage(75.0%)	8	NA	NA
WP_001185349.1|1833204_1833477_-	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	46.9	8.3e-08
WP_000991128.1|1833478_1834033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000214378.1|1834029_1834782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000543726.1|1835694_1835955_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	66.3	1.3e-23
WP_000982476.1|1835954_1836500_+	ash family protein	NA	Q7M2A7	Enterobacteria_phage	65.7	7.7e-29
WP_001014981.1|1836499_1836721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000842357.1|1836720_1837044_+	DUF5375 family protein	NA	NA	NA	NA	NA
WP_000016230.1|1837058_1839389_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	73.2	0.0e+00
>prophage 128
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1861255	1862209	4755838	transposase	Sodalis_phage(100.0%)	1	NA	NA
WP_000749994.1|1861255_1862209_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	52.5	8.1e-66
>prophage 129
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1869410	1873380	4755838		Acinetobacter_phage(50.0%)	2	NA	NA
WP_000028345.1|1869410_1870880_-	type I restriction-modification system subunit M	NA	J7I0U9	Acinetobacter_phage	28.8	3.4e-31
WP_000774451.1|1870950_1873380_-	DEAD/DEAH box helicase family protein	NA	Q6NDX2	Leptospira_phage	28.2	1.4e-21
>prophage 130
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1878387	1880049	4755838		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000919519.1|1878387_1880049_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	72.3	6.0e-08
>prophage 131
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1885781	1886843	4755838		Acanthamoeba_polyphaga_lentillevirus(100.0%)	1	NA	NA
WP_000075423.1|1885781_1886843_+	SIS domain-containing protein	NA	J3IZE6	Acanthamoeba_polyphaga_lentillevirus	23.5	5.4e-10
>prophage 132
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1891096	1892376	4755838		Shigella_phage(50.0%)	2	NA	NA
WP_000799924.1|1891096_1891834_-	DNA replication protein DnaC	NA	V5UQI5	Shigella_phage	51.2	1.2e-64
WP_000098578.1|1891836_1892376_-	primosomal protein DnaT	NA	T1SA92	Salmonella_phage	65.6	2.2e-28
>prophage 133
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1897350	1898415	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000211207.1|1897350_1898415_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	33.1	4.2e-15
>prophage 134
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1902192	1905091	4755838		Streptococcus_phage(50.0%)	3	NA	NA
WP_000175965.1|1902192_1903782_+	peptide chain release factor 3	NA	D0R0F5	Streptococcus_phage	25.2	3.1e-30
WP_000178963.1|1904183_1904801_+	molecular chaperone OsmY	NA	NA	NA	NA	NA
WP_000490276.1|1904929_1905091_+	DUF1328 domain-containing protein	NA	A0A0N7CBR2	Salmonella_phage	66.0	1.8e-10
>prophage 135
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1910638	1911961	4755838		Geobacillus_virus(100.0%)	1	NA	NA
WP_000477838.1|1910638_1911961_+	thymidine phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	41.4	1.8e-79
>prophage 136
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1924113	1929277	4755838		Enterococcus_phage(33.33%)	3	NA	NA
WP_000093829.1|1924113_1925346_+	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA	A0A0C5K935	Enterococcus_phage	45.5	6.7e-89
WP_000046770.1|1925463_1927131_-	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	26.7	1.7e-42
WP_000373271.1|1927339_1929277_+	murein transglycosylase	NA	A0A1P8CWQ1	Bacillus_phage	36.4	1.8e-11
>prophage 137
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1933226	1934651	4755838		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
WP_001219541.1|1933226_1934651_+	two-component system sensor histidine kinase CreC	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.6	7.9e-09
>prophage 138
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1953401	1965697	4755838		Cyanophage(20.0%)	12	NA	NA
WP_000130175.1|1953401_1954355_+	transaldolase	NA	A0A127KNC6	Cyanophage	31.0	9.7e-11
WP_001094677.1|1954465_1955056_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_000528527.1|1955112_1955679_-	acetate uptake transporter	NA	NA	NA	NA	NA
WP_001103477.1|1955828_1956542_-	acidic protein MsyB	NA	NA	NA	NA	NA
WP_001258090.1|1956577_1956982_-	DUF2541 family protein	NA	NA	NA	NA	NA
WP_000516125.1|1957330_1959247_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.1	1.2e-148
WP_001119009.1|1959332_1960472_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	36.0	4.2e-29
WP_000534905.1|1960756_1961704_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000026889.1|1961830_1962175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001068129.1|1962235_1962757_-	glycoside hydrolase family 108 protein	NA	A0A286N2Q6	Klebsiella_phage	54.9	6.4e-49
WP_000860679.1|1962773_1963217_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_000235812.1|1963597_1965697_+	chitinase	NA	A0A1L5JGH0	Plodia_interpunctella_granulovirus	28.7	1.2e-34
>prophage 139
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1985859	1987353	4755838		Tetraselmis_virus(100.0%)	1	NA	NA
WP_000831880.1|1985859_1987353_+	sulfatase-like hydrolase/transferase	NA	A0A2P0VMN7	Tetraselmis_virus	30.6	9.1e-32
>prophage 140
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1991918	1993085	4755838		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000681340.1|1991918_1993085_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	51.1	7.5e-90
>prophage 141
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	1999583	2002418	4755838	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_001670710.1|1999583_2002418_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2K9L260	Tupanvirus	26.1	6.5e-79
>prophage 142
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2021427	2022576	4755838		Halovirus(100.0%)	1	NA	NA
WP_000597272.1|2021427_2022576_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.1	1.5e-50
>prophage 143
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2028113	2033753	4755838		Hepacivirus(50.0%)	4	NA	NA
WP_000355792.1|2028113_2029667_-	crotonobetaine/carnitine-CoA ligase	NA	Q75ZG1	Hepacivirus	24.6	1.5e-29
WP_001016212.1|2029729_2030947_-	L-carnitine CoA-transferase	NA	NA	NA	NA	NA
WP_000347134.1|2031058_2032201_-	crotonobetainyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_000787073.1|2032235_2033753_-	L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA	A0A2I7QNT1	Vibrio_phage	22.2	1.4e-08
>prophage 144
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2041514	2043404	4755838		Catovirus(100.0%)	1	NA	NA
WP_000066312.1|2041514_2043404_+	sulfatase-like hydrolase/transferase	NA	A0A1V0SA98	Catovirus	24.7	3.9e-27
>prophage 145
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2046541	2047975	4755838		Bacillus_phage(50.0%)	2	NA	NA
WP_000624379.1|2046541_2047021_+	type 3 dihydrofolate reductase	NA	A0A219UQN5	Bacillus_phage	47.1	2.3e-29
WP_000257211.1|2047126_2047975_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	A0A0E3T919	Enterococcus_phage	47.8	5.8e-07
>prophage 146
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2055705	2064476	4755838	transposase	uncultured_Mediterranean_phage(25.0%)	6	NA	NA
WP_001116970.1|2055705_2058612_-	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	37.1	2.9e-21
WP_000035726.1|2058785_2061137_-	DNA polymerase II	NA	A0A1B2RW58	Lymphocystis_disease_virus	25.5	4.2e-15
WP_000877520.1|2061180_2061801_-	YdcF family protein	NA	NA	NA	NA	NA
WP_071529795.1|2062002_2062305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001576887.1|2062807_2063248_-|transposase	IS200/IS605 family transposase	transposase	I4AZM1	Saccharomonospora_phage	54.4	9.2e-33
WP_001669153.1|2063270_2064476_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	88.3	1.6e-167
>prophage 147
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2070931	2071639	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000915978.1|2070931_2071639_-	thiamine ABC transporter ATP-binding protein ThiQ	NA	G3M9Y6	Bacillus_virus	38.3	8.2e-23
>prophage 148
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2079687	2081259	4755838		Micromonas_sp._RCC1109_virus(100.0%)	1	NA	NA
WP_000082814.1|2079687_2081259_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.1	6.9e-06
>prophage 149
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2111571	2112615	4755838		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_001217365.1|2111571_2112615_+	GMP reductase	NA	A0A0N9Q9A5	Chrysochromulina_ericina_virus	56.2	3.4e-102
>prophage 150
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2116872	2117436	4755838		Sphingobium_phage(100.0%)	1	NA	NA
WP_000936329.1|2116872_2117436_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	30.0	2.6e-11
>prophage 151
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2128527	2129952	4755838		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_001519338.1|2128527_2129952_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.1	1.2e-41
>prophage 152
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2141293	2150997	4755838		Escherichia_phage(25.0%)	9	NA	NA
WP_000678254.1|2141293_2142061_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	35.7	1.7e-29
WP_000734276.1|2142090_2142885_-	adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
WP_000829973.1|2142905_2143766_-	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_000846613.1|2143872_2144220_-	YacC family pilotin-like protein	NA	NA	NA	NA	NA
WP_000946055.1|2144421_2146032_+	multicopper oxidase CueO	NA	A0A0C6DWA2	Mamastrovirus	58.7	1.1e-19
WP_000829731.1|2146109_2148500_-	pyrroloquinoline quinone-dependent dehydrogenase	NA	NA	NA	NA	NA
WP_000683342.1|2148705_2149242_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	33.1	1.0e-17
WP_000651591.1|2149299_2149962_-	carbonate dehydratase	NA	NA	NA	NA	NA
WP_000150619.1|2150070_2150997_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	32.7	5.9e-21
>prophage 153
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2161762	2163181	4755838		unidentified_phage(100.0%)	1	NA	NA
WP_000174622.1|2161762_2163181_-	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	37.8	1.4e-26
>prophage 154
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2166197	2168672	4755838		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_000938539.1|2166197_2168672_+	ATP-dependent helicase HrpB	NA	A0A2H4UU36	Bodo_saltans_virus	28.0	9.5e-34
>prophage 155
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2173865	2174663	4755838		Planktothrix_phage(100.0%)	1	NA	NA
WP_001157197.1|2173865_2174663_+	Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	NA	G9BWD6	Planktothrix_phage	27.4	3.5e-14
>prophage 156
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2188060	2188405	4755838		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_001278668.1|2188060_2188405_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	50.5	1.0e-26
>prophage 157
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2192388	2193816	4755838	protease	uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000753958.1|2192388_2193816_+|protease	serine endoprotease DegP	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.2	4.2e-26
>prophage 158
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2207251	2208010	4755838		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000947410.1|2207251_2208010_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	NA	R9W0U9	Flavobacterium_phage	42.2	2.5e-25
>prophage 159
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2216842	2220945	4755838		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
WP_000569412.1|2216842_2217439_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	39.3	1.5e-25
WP_001294824.1|2217462_2220945_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.8	2.8e-209
>prophage 160
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2234932	2235964	4755838		Planktothrix_phage(100.0%)	1	NA	NA
WP_000594021.1|2234932_2235964_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	40.2	5.5e-36
>prophage 161
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2242784	2243588	4755838		Indivirus(100.0%)	1	NA	NA
WP_000154884.1|2242784_2243588_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	34.6	3.9e-37
>prophage 162
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2247638	2251849	4755838		Lactobacillus_phage(33.33%)	5	NA	NA
WP_000644706.1|2247638_2249006_-	murein transglycosylase D	NA	A0A0A7NU10	Lactobacillus_phage	33.0	1.4e-10
WP_001052773.1|2249077_2249833_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000801238.1|2249867_2250590_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000917872.1|2250586_2251054_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.9	4.7e-51
WP_001670675.1|2251117_2251849_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.9	6.4e-39
>prophage 163
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2258909	2261549	4755838		Vibrio_phage(100.0%)	1	NA	NA
WP_000449797.1|2258909_2261549_+	type VI secretion system ATPase TssH	NA	A0A2I7SAX5	Vibrio_phage	34.7	6.7e-78
>prophage 164
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2281534	2285614	4755838		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000272670.1|2281534_2285614_+	type IV secretion protein Rhs	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	51.8	8.3e-27
>prophage 165
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2305441	2306020	4755838		Caulobacter_phage(100.0%)	1	NA	NA
WP_000284051.1|2305441_2306020_+	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	30.8	1.3e-13
>prophage 166
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2309234	2310374	4755838		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000528888.1|2309234_2310374_+	RNA ligase RtcB family protein	NA	A0A222ZM82	Mycobacterium_phage	30.7	1.0e-30
>prophage 167
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2315147	2318848	4755838		Streptococcus_phage(66.67%)	3	NA	NA
WP_001043667.1|2315147_2316200_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	58.8	2.6e-113
WP_001285275.1|2316482_2317586_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.8	6.9e-61
WP_000893238.1|2317597_2318848_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.5	2.8e-98
>prophage 168
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2327740	2328013	4755838		Salmonella_phage(100.0%)	1	NA	NA
WP_001675688.1|2327740_2328013_-	hypothetical protein	NA	B8K1I9	Salmonella_phage	60.9	5.4e-07
>prophage 169
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2340555	2341080	4755838		Escherichia_phage(100.0%)	1	NA	NA
WP_000830237.1|2340555_2341080_+	outer membrane beta-barrel protein	NA	B0FEG7	Escherichia_phage	29.2	1.3e-09
>prophage 170
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2348727	2358436	4755838		Streptococcus_phage(33.33%)	5	NA	NA
WP_000083309.1|2348727_2351016_+	gold/copper-translocating P-type ATPase GolT	NA	E4ZFI9	Streptococcus_phage	33.2	2.1e-91
WP_001159465.1|2351567_2351762_+	gold resistance metallochaperone GolB	NA	NA	NA	NA	NA
WP_000288503.1|2352053_2353307_+	MFS transporter	NA	NA	NA	NA	NA
WP_000910361.1|2353495_2355454_+	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	32.2	7.4e-82
WP_077906109.1|2355463_2358436_+	type III restriction-modification system endonuclease	NA	Q71TG1	Escherichia_phage	26.3	2.7e-83
>prophage 171
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2371851	2373738	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000010221.1|2371851_2373738_+	propionate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	29.2	9.1e-53
>prophage 172
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2388238	2389351	4755838		Bacillus_phage(100.0%)	1	NA	NA
WP_000484084.1|2388238_2389351_+	diguanylate cyclase AdrA	NA	A0A127AWB9	Bacillus_phage	33.1	5.6e-18
>prophage 173
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2393038	2402957	4755838		Bacillus_phage(60.0%)	7	NA	NA
WP_000964301.1|2393038_2393950_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	63.6	9.3e-104
WP_001219276.1|2394075_2394984_+	fructokinase	NA	NA	NA	NA	NA
WP_000755611.1|2395003_2396176_-	MFS transporter AraJ	NA	NA	NA	NA	NA
WP_001669347.1|2396348_2399489_-	exonuclease subunit SbcC	NA	G3MAB6	Bacillus_virus	21.3	7.4e-07
WP_001221260.1|2399485_2400688_-	exonuclease subunit SbcD	NA	A0A0A0PQ58	Bacillus_phage	24.9	1.3e-07
WP_000113920.1|2400902_2401592_+	phosphate response regulator transcription factor PhoB	NA	W8CYM9	Bacillus_phage	38.0	2.6e-37
WP_000893645.1|2401661_2402957_+	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	31.1	2.0e-27
>prophage 174
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2410929	2415269	4755838	tRNA	uncultured_Mediterranean_phage(100.0%)	4	NA	NA
WP_000667305.1|2410929_2412057_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.8	9.5e-90
WP_000007628.1|2412079_2412412_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	33.0	3.7e-10
WP_000934808.1|2412439_2414287_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_000046629.1|2414297_2415269_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	38.1	2.3e-44
>prophage 175
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2419953	2421616	4755838		Indivirus(50.0%)	2	NA	NA
WP_001150216.1|2419953_2421057_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.2	2.5e-50
WP_001021372.1|2421145_2421616_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.0	1.0e-29
>prophage 176
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2431135	2432245	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000928799.1|2431135_2432245_-	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT	NA	G3M9Y6	Bacillus_virus	32.8	8.0e-25
>prophage 177
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2453310	2458478	4755838	protease	Agrobacterium_phage(25.0%)	4	NA	NA
WP_000122257.1|2453310_2453934_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
WP_000130314.1|2454185_2455457_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.5	5.6e-131
WP_001067725.1|2455642_2457997_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.5	2.7e-224
WP_001043544.1|2458205_2458478_+	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.9e-20
>prophage 178
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2461771	2462467	4755838		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000817210.1|2461771_2462467_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.0	3.5e-87
>prophage 179
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2466867	2470414	4755838		Bacillus_phage(100.0%)	2	NA	NA
WP_001235560.1|2466867_2468640_+	SmdA family multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.8	4.7e-51
WP_001256070.1|2468632_2470414_+	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.7	5.4e-39
>prophage 180
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2488032	2498947	4755838	transposase	Sodalis_phage(20.0%)	12	NA	NA
WP_000440511.1|2488032_2488968_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	51.7	2.8e-63
WP_000051161.1|2489037_2489205_-	pleiotropic regulatory protein RsmS	NA	NA	NA	NA	NA
WP_000926657.1|2489218_2489734_-	primosomal replication protein N''	NA	NA	NA	NA	NA
WP_001189860.1|2489814_2490192_+	DUF454 family protein	NA	NA	NA	NA	NA
WP_000127350.1|2490344_2490896_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	1.0e-28
WP_000121978.1|2491009_2492938_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	41.5	2.3e-43
WP_000467098.1|2492983_2493313_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_001195023.1|2493312_2493918_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_001523272.1|2494028_2495903_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.9	1.7e-115
WP_001220237.1|2496143_2496788_+	adenylate kinase	NA	NA	NA	NA	NA
WP_001250072.1|2497016_2497979_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000801778.1|2497975_2498947_-	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.4	6.6e-15
>prophage 181
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2508047	2513266	4755838		uncultured_virus(50.0%)	5	NA	NA
WP_000083909.1|2508047_2510549_-	copper-exporting P-type ATPase CopA	NA	A0A218MNH6	uncultured_virus	37.2	5.1e-112
WP_001026760.1|2510658_2511075_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_000561177.1|2511075_2511528_-	NfeD family protein	NA	NA	NA	NA	NA
WP_000906146.1|2511524_2512442_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
WP_000140192.1|2512588_2513266_+	iron ABC transporter ATP-binding protein FetA	NA	G3M9Y6	Bacillus_virus	32.5	3.9e-22
>prophage 182
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2516541	2517228	4755838		Planktothrix_phage(100.0%)	1	NA	NA
WP_001110599.1|2516541_2517228_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.5	2.1e-31
>prophage 183
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2522081	2523098	4755838		Planktothrix_phage(100.0%)	1	NA	NA
WP_000569660.1|2522081_2523098_+	virulence-associated ABC transporter ATP-binding protein SfbB	NA	G9BWD6	Planktothrix_phage	38.2	1.3e-32
>prophage 184
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2527569	2529351	4755838		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_001096868.1|2527569_2529351_+	glyoxylate carboligase	NA	A0A0P0CRC5	Ostreococcus_lucimarinus_virus	27.3	1.9e-39
>prophage 185
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2536801	2537950	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_000706331.1|2536801_2537950_+	glycerate 3-kinase	NA	W6LM47	Streptococcus_phage	39.0	9.1e-48
>prophage 186
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2549222	2553655	4755838	tRNA	Moumouvirus(50.0%)	6	NA	NA
WP_000912377.1|2549222_2550608_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	35.5	1.1e-44
WP_000819124.1|2550651_2551476_-	DUF2145 domain-containing protein	NA	NA	NA	NA	NA
WP_001038579.1|2551472_2551910_-	STM0539 family protein	NA	NA	NA	NA	NA
WP_001143571.1|2551902_2552448_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_000190280.1|2552574_2552787_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_000729165.1|2552788_2553655_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	36.5	4.2e-29
>prophage 187
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2566558	2571767	4755838		Salmonella_phage(66.67%)	5	NA	NA
WP_000703643.1|2566558_2567479_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	92.1	1.9e-160
WP_000915520.1|2567475_2567838_-	GtrA family protein	NA	I1TED9	Salmonella_phage	99.2	5.0e-61
WP_000946036.1|2568704_2569034_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_000339634.1|2569371_2570226_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000195929.1|2570441_2571767_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.5	1.0e-103
>prophage 188
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2595576	2601694	4755838		Tupanvirus(50.0%)	3	NA	NA
WP_000194175.1|2595576_2599461_+	enterobactin non-ribosomal peptide synthetase EntF	NA	A0A2K9KZV5	Tupanvirus	26.8	3.2e-60
WP_001139585.1|2599710_2600847_+	LPS O-antigen length regulator	NA	NA	NA	NA	NA
WP_000140620.1|2600899_2601694_-	iron-enterobactin ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	23.9	2.2e-08
>prophage 189
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2616166	2617992	4755838		uncultured_marine_virus(50.0%)	2	NA	NA
WP_001164756.1|2616166_2616784_-	ParB-like nuclease domain-containing protein	NA	A0A0F7L444	uncultured_marine_virus	51.3	3.0e-53
WP_000118139.1|2616756_2617992_-	phosphoadenosine phosphosulfate reductase	NA	A0A220GKF8	Streptococcus_phage	34.3	2.9e-60
>prophage 190
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2621368	2627916	4755838		Bacillus_virus(33.33%)	6	NA	NA
WP_000887643.1|2621368_2622934_+	alkyl hydroperoxide reductase subunit F	NA	G3MA85	Bacillus_virus	34.0	2.4e-43
WP_000377443.1|2623266_2623827_+	molecular chaperone	NA	NA	NA	NA	NA
WP_000064311.1|2623819_2626099_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	25.7	3.4e-46
WP_001250381.1|2626095_2626653_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_000417096.1|2626652_2627420_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000278499.1|2627487_2627916_-	universal stress protein UspG	NA	A0A1W6JNV4	Morganella_phage	39.2	1.3e-18
>prophage 191
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2643030	2643681	4755838		Morganella_phage(50.0%)	2	NA	NA
WP_000034826.1|2643030_2643240_+	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	78.1	5.9e-22
WP_000939753.1|2643297_2643681_-	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	48.6	1.7e-22
>prophage 192
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2648516	2651001	4755838		Stx2-converting_phage(50.0%)	2	NA	NA
WP_000858711.1|2648516_2649728_-	D-alanyl-D-alanine carboxypeptidase DacA	NA	B6DZZ7	Stx2-converting_phage	49.7	3.4e-101
WP_001231310.1|2649867_2651001_-	endolytic peptidoglycan transglycosylase RlpA	NA	F5B3X9	Synechococcus_phage	53.2	2.8e-09
>prophage 193
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2659228	2661811	4755838	tRNA	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001157916.1|2659228_2661811_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	42.7	5.6e-186
>prophage 194
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2672636	2677439	4755838		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000368029.1|2672636_2674316_-	molecular chaperone HscC	NA	F2Y0P3	Organic_Lake_phycodnavirus	35.9	2.3e-76
WP_000498893.1|2674391_2675630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001207486.1|2675661_2676597_-	pyrimidine-specific ribonucleoside hydrolase RihA	NA	NA	NA	NA	NA
WP_000631392.1|2676713_2677439_-	glutamate/aspartate ABC transporter ATP binding protein GltL	NA	G9BWD6	Planktothrix_phage	38.1	1.9e-30
>prophage 195
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2683339	2684425	4755838		Pseudomonas_phage(100.0%)	1	NA	NA
WP_000493272.1|2683339_2684425_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.6	6.6e-48
>prophage 196
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2689042	2690707	4755838		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_000337034.1|2689042_2690707_-	asparagine synthase B	NA	A9YVS6	Ostreococcus_tauri_virus	39.0	4.7e-85
>prophage 197
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2695361	2705574	4755838	tRNA	Vibrio_phage(25.0%)	7	NA	NA
WP_001023068.1|2695361_2697314_+	PTS N-acetyl glucosamine transporter subunit IIABC	NA	A0A2I7SAJ6	Vibrio_phage	48.6	2.9e-09
WP_001287182.1|2697524_2699192_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	95.8	0.0e+00
WP_001258789.1|2699852_2701259_+	chitoporin	NA	NA	NA	NA	NA
WP_000722260.1|2701308_2701641_+	lipoprotein	NA	NA	NA	NA	NA
WP_000057014.1|2701689_2702994_-	tricarballylate/proton symporter TcuC	NA	Q6JIH2	Burkholderia_virus	34.9	1.2e-59
WP_000811131.1|2703044_2704184_-	tricarballylate utilization protein TcuB	NA	NA	NA	NA	NA
WP_000228701.1|2704170_2705574_-	FAD-dependent tricarballylate dehydrogenase TcuA	NA	A0A2P0ZL82	Lactobacillus_phage	26.5	2.7e-09
>prophage 198
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2716657	2717335	4755838		Bacillus_phage(100.0%)	1	NA	NA
WP_000186060.1|2716657_2717335_-	two-component system response regulator KdpE	NA	W8CYM9	Bacillus_phage	31.1	4.4e-26
>prophage 199
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2720605	2728038	4755838		Paramecium_bursaria_Chlorella_virus(33.33%)	6	NA	NA
WP_000088023.1|2720605_2722654_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.3	1.1e-27
WP_000741171.1|2722674_2724354_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_001670793.1|2724353_2724443_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_000401437.1|2724779_2724986_+	YbfA family protein	NA	NA	NA	NA	NA
WP_001142025.1|2725096_2726518_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	31.7	2.7e-57
WP_001041132.1|2726556_2728038_-	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	28.8	5.0e-46
>prophage 200
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2731945	2739138	4755838	integrase	Escherichia_phage(33.33%)	8	2729861:2729874	2735032:2735045
2729861:2729874	attL	GTGGCGCGCTGGAT	NA	NA	NA	NA
WP_000824704.1|2731945_2732512_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2L1IV36	Escherichia_phage	54.4	4.3e-51
WP_010988980.1|2732971_2733307_+	membrane protein	NA	NA	NA	NA	NA
WP_001194237.1|2733308_2734049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001521816.1|2734334_2735486_+	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	41.9	3.7e-81
2735032:2735045	attR	GTGGCGCGCTGGAT	NA	NA	NA	NA
WP_000973918.1|2735482_2736379_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000824901.1|2736391_2737525_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_000998823.1|2737653_2738424_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000702849.1|2738427_2739138_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	26.3	2.2e-07
>prophage 201
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2744242	2745034	4755838		Kaumoebavirus(100.0%)	1	NA	NA
WP_001113968.1|2744242_2745034_+	endonuclease VIII	NA	A0A1V0CNR6	Kaumoebavirus	25.5	8.9e-10
>prophage 202
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2771235	2774759	4755838		Vibrio_phage(33.33%)	4	NA	NA
WP_000345373.1|2771235_2771955_+	nicotinamide riboside transporter PnuC	NA	A0A126HGA3	Vibrio_phage	35.3	1.1e-22
WP_000951251.1|2771951_2772890_-	CDF family zinc transporter ZitB	NA	A0A1V0SED0	Indivirus	28.1	1.4e-25
WP_000784380.1|2773000_2773387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001109233.1|2773706_2774759_+	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A0B6VT43	Edwardsiella_phage	47.1	6.4e-80
>prophage 203
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2778484	2779753	4755838		Oenococcus_phage(100.0%)	1	NA	NA
WP_000074133.1|2778484_2779753_+	SLC13/DASS family transporter	NA	Q6A201	Oenococcus_phage	26.6	3.2e-33
>prophage 204
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2785428	2786205	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_001214706.1|2785428_2786205_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.5	1.4e-12
>prophage 205
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2790513	2798131	4755838		Tupanvirus(33.33%)	8	NA	NA
WP_001265427.1|2790513_2791530_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	47.0	4.2e-81
WP_000885513.1|2791752_2792661_-	DUF2167 domain-containing protein	NA	NA	NA	NA	NA
WP_000096929.1|2792831_2794307_-	molybdate ABC transporter ATP-binding protein ModF	NA	W5SAS9	Pithovirus	30.7	3.3e-10
WP_001147416.1|2794374_2795163_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_000891513.1|2795291_2795441_+	multidrug efflux pump-associated protein, AcrZ family	NA	NA	NA	NA	NA
WP_000951416.1|2795607_2796381_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000604026.1|2796380_2797070_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000891706.1|2797072_2798131_+	molybdenum ABC transporter ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.3	5.1e-21
>prophage 206
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2806588	2810017	4755838		Catovirus(50.0%)	3	NA	NA
WP_001095242.1|2806588_2808109_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	40.0	1.7e-81
WP_000767403.1|2808193_2808670_-	kinase inhibitor	NA	NA	NA	NA	NA
WP_000205503.1|2808727_2810017_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.5	7.7e-19
>prophage 207
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2816877	2820145	4755838		Phage_Gifsy-2(50.0%)	2	NA	NA
WP_000482009.1|2816877_2819145_+	SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP	NA	Q9MBL9	Phage_Gifsy-2	42.1	4.1e-15
WP_001246037.1|2819236_2820145_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	29.9	6.0e-26
>prophage 208
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2831860	2841173	4755838		Anomala_cuprea_entomopoxvirus(25.0%)	8	NA	NA
WP_001287610.1|2831860_2833597_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.3	1.3e-18
WP_000743431.1|2833589_2834585_-	secretion protein HlyD	NA	NA	NA	NA	NA
WP_001027526.1|2834584_2835259_-	transcriptional regulator CecR	NA	NA	NA	NA	NA
WP_000007068.1|2835488_2836850_+	ATP-dependent RNA helicase RhlE	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.2	2.9e-53
WP_001218675.1|2837057_2839202_+	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	26.7	7.4e-43
WP_000386497.1|2839231_2840206_+	DNA-binding protein YbiB	NA	NA	NA	NA	NA
WP_000849089.1|2840361_2840622_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_000146330.1|2840906_2841173_-	DksA/TraR family C4-type zinc finger protein	NA	E5E4B1	Acinetobacter_phage	52.8	2.2e-13
>prophage 209
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2844641	2849951	4755838		Planktothrix_phage(33.33%)	6	NA	NA
WP_000569093.1|2844641_2845364_-	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	43.2	1.9e-35
WP_001159076.1|2845360_2846020_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_000838671.1|2846165_2846912_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_000100805.1|2847388_2847892_-	DNA starvation/stationary phase protection protein Dps	NA	A0A222YYG6	Streptomyces_phage	23.0	7.1e-05
WP_001119554.1|2848194_2849082_-	threonine/homoserine exporter RhtA	NA	NA	NA	NA	NA
WP_000716763.1|2849435_2849951_+	outer membrane protein OmpX	NA	A5LH44	Enterobacteria_phage	34.2	1.1e-16
>prophage 210
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2854937	2861501	4755838		Tupanvirus(50.0%)	4	NA	NA
WP_000961480.1|2854937_2856533_+	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	27.9	2.7e-58
WP_000210963.1|2856654_2857920_-	DUF1479 domain-containing protein	NA	NA	NA	NA	NA
WP_000217910.1|2858181_2858991_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000192655.1|2859068_2861501_-	glycyl radical protein	NA	A0A076YHZ7	Citrobacter_phage	43.5	2.1e-09
>prophage 211
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2865823	2867695	4755838		Planktothrix_phage(100.0%)	1	NA	NA
WP_001120590.1|2865823_2867695_+	glutathione ABC transporter ATP-binding protein GsiA	NA	G9BWD6	Planktothrix_phage	28.5	1.3e-14
>prophage 212
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2883231	2885238	4755838		Stx2-converting_phage(50.0%)	2	NA	NA
WP_000195712.1|2883231_2884434_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	47.1	2.4e-99
WP_000450104.1|2884479_2885238_-	DNA-binding transcriptional repressor DeoR	NA	A0A077SK06	Escherichia_phage	30.0	7.9e-16
>prophage 213
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2892809	2901978	4755838		Vibrio_phage(25.0%)	11	NA	NA
WP_000495513.1|2892809_2893073_-	glutaredoxin, GrxA family	NA	A0A2I7SAE2	Vibrio_phage	70.5	5.9e-27
WP_001259137.1|2893242_2893533_+	YbjC family protein	NA	NA	NA	NA	NA
WP_000075300.1|2893516_2894239_+	nitroreductase NfsA	NA	NA	NA	NA	NA
WP_000684361.1|2894296_2895199_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	34.0	3.5e-34
WP_000624810.1|2895294_2895771_+	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_000125764.1|2896119_2897232_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_001000698.1|2897319_2898453_+	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.9	6.5e-30
WP_000105453.1|2898462_2899416_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_001061629.1|2899412_2900258_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_000505788.1|2900331_2900805_+	YbjO family protein	NA	NA	NA	NA	NA
WP_001149788.1|2900847_2901978_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	25.8	1.2e-23
>prophage 214
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2908776	2911528	4755838		Planktothrix_phage(50.0%)	4	NA	NA
WP_000027186.1|2908776_2909505_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	35.8	5.1e-28
WP_001270724.1|2909734_2910250_-	lipoprotein	NA	NA	NA	NA	NA
WP_001160725.1|2910377_2910701_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000645850.1|2910697_2911528_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	30.7	2.3e-08
>prophage 215
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2915117	2916836	4755838		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_000815313.1|2915117_2916836_-	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.4	1.7e-29
>prophage 216
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2923621	2930935	4755838	protease	Dickeya_phage(16.67%)	7	NA	NA
WP_001201748.1|2923621_2924740_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.8e-08
WP_000125893.1|2924736_2926683_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
WP_000447499.1|2926812_2927034_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|2927357_2927678_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934064.1|2927708_2929985_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_001117984.1|2930198_2930396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001670446.1|2930557_2930935_-	hypothetical protein	NA	A0A077KET4	Ralstonia_phage	42.7	5.9e-20
>prophage 217
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2935470	2952266	4755838	tRNA	Bacillus_phage(25.0%)	10	NA	NA
WP_001202252.1|2935470_2937192_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	23.5	6.4e-13
WP_001044546.1|2937192_2938959_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	24.8	3.9e-21
WP_000537406.1|2939072_2940041_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	45.5	6.5e-63
WP_000228469.1|2940586_2941081_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_001670447.1|2941215_2945298_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.5	2.9e-88
WP_001519746.1|2945440_2946052_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_000067785.1|2946061_2947405_+	replication-associated recombination protein RarA	NA	G3MBE0	Bacillus_virus	40.9	1.6e-80
WP_000886697.1|2947663_2948956_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.5	8.6e-95
WP_000850265.1|2949193_2951638_+	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.7	1.9e-223
WP_000213069.1|2951648_2952266_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	4.3e-76
>prophage 218
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2956568	2961259	4755838		Tetraselmis_virus(100.0%)	4	NA	NA
WP_079843732.1|2956568_2957345_-	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.5	2.6e-22
WP_010989001.1|2957484_2957811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001145558.1|2957941_2958901_+	SPI-2 type III secretion system effector SopD2	NA	NA	NA	NA	NA
WP_001292799.1|2958976_2961259_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.0	1.1e-161
>prophage 219
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2965355	2966444	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_000079584.1|2965355_2966444_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	46.5	1.2e-78
>prophage 220
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2971500	2976064	4755838		Bacillus_phage(66.67%)	3	NA	NA
WP_000167332.1|2971500_2971785_+	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	4.1e-10
WP_000705772.1|2972014_2974279_+	ComEC family protein	NA	Q332C0	Clostridium_botulinum_C_phage	22.9	2.3e-10
WP_000551246.1|2974315_2976064_+	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	30.5	3.2e-60
>prophage 221
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	2981286	3081720	4755838	terminase,protease,portal,tail,integrase,lysis,tRNA,holin	Salmonella_phage(43.86%)	103	2984195:2984214	3055990:3056009
WP_001154027.1|2981286_2982090_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|2982082_2983405_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060024.1|2983385_2984090_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572746.1|2984089_2988556_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
2984195:2984214	attL	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
WP_000925875.1|2988900_2990748_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|2991007_2991556_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109471.1|2991583_2992231_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000462653.1|2992292_2993483_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977709.1|2993667_2994759_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000117870.1|2995365_2996766_-|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
WP_000762343.1|2996966_2997428_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000544853.1|2997744_2998959_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000893197.1|2999204_3000638_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_000191406.1|3000718_3001921_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001262306.1|3002115_3003408_-|integrase	site-specific integrase	integrase	S4TSP2	Salmonella_phage	99.8	1.0e-252
WP_000065276.1|3003452_3003701_-	excisionase family protein	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
WP_001237031.1|3003741_3003981_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_001539618.1|3004023_3005181_-	recombinase RecT	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
WP_000017133.1|3005143_3008029_-	exodeoxyribonuclease	NA	S4TNL0	Salmonella_phage	97.3	0.0e+00
WP_001668146.1|3008155_3008455_-	hypothetical protein	NA	S4TSN6	Salmonella_phage	84.5	8.1e-49
WP_000917564.1|3008476_3008635_-	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	1.2e-22
WP_014344008.1|3008627_3008888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038966.1|3008937_3009348_-	helix-turn-helix domain-containing protein	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
WP_000370145.1|3009467_3009707_+	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
WP_001574095.1|3009672_3010047_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
WP_000062941.1|3010131_3011115_+	hypothetical protein	NA	H6WRX7	Salmonella_phage	100.0	1.9e-163
WP_000800010.1|3011117_3011867_+	ATP-binding protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
WP_000113629.1|3011877_3012225_+	DUF977 family protein	NA	H6WRX9	Salmonella_phage	89.6	5.4e-52
WP_000065108.1|3012221_3012533_+	ead/Ea22-like family protein	NA	A0A220NQV2	Salmonella_phage	97.2	7.2e-32
WP_014343823.1|3012610_3012901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001217665.1|3013192_3013426_+	DinI family protein	NA	H6WRY5	Salmonella_phage	98.7	2.1e-36
WP_000807548.1|3013537_3013759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000929805.1|3013841_3014444_+	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	98.5	8.3e-109
WP_001096552.1|3014652_3015264_+	hypothetical protein	NA	A0A0M4RU10	Salmonella_phage	91.6	6.9e-79
WP_001617856.1|3015260_3015407_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
WP_001047631.1|3015396_3016194_+	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.6	2.3e-151
WP_010989004.1|3016260_3016578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001534733.1|3016751_3016877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000798705.1|3017012_3017462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001141973.1|3017822_3018509_-|protease	type III secretion system effector protease GtgA	protease	Q9MBM0	Phage_Gifsy-2	100.0	2.1e-132
WP_001574216.1|3018784_3019114_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_000984586.1|3019097_3019550_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
WP_001541990.1|3019567_3020047_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
WP_000371784.1|3020254_3020788_+	DUF1441 family protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
WP_000989241.1|3020744_3022883_+|terminase	phage terminase large subunit family protein	terminase	A5LH27	Enterobacteria_phage	72.6	3.4e-290
WP_000196190.1|3022879_3023086_+	hypothetical protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
WP_001009207.1|3023082_3024630_+|portal	phage portal protein	portal	A0A291AWU2	Escherichia_phage	64.3	2.8e-177
WP_010989008.1|3024553_3026635_+|protease	Clp protease ClpP	protease	A0A291AWT6	Escherichia_phage	69.5	4.8e-265
WP_001107908.1|3026725_3027049_+	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
WP_000774239.1|3027041_3027341_+	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	45.1	4.5e-15
WP_000453194.1|3027321_3027888_+|tail	phage tail protein	tail	Q9G063	Phage_Gifsy-2	97.8	9.5e-14
WP_000196702.1|3027884_3028286_+|tail	tail protein	tail	K7PHM6	Enterobacterial_phage	60.9	1.5e-42
WP_000132756.1|3028297_3029047_+|tail	tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
WP_000478859.1|3029092_3029491_+|tail	phage minor tail protein G	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
WP_010989009.1|3029487_3029817_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	50.9	5.0e-23
WP_077918011.1|3029896_3032884_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.1	4.8e-266
WP_000978296.1|3032880_3033213_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	61.5	3.3e-35
WP_000725267.1|3033311_3033809_+	outer membrane beta-barrel protein	NA	A0A1B0VBR9	Salmonella_phage	36.6	1.4e-16
WP_000877926.1|3033925_3034459_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_001152415.1|3034548_3035244_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.3e-89
WP_000606351.1|3035253_3035991_+|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	76.1	1.6e-114
WP_000246065.1|3035888_3036593_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	62.6	9.2e-67
WP_000033415.1|3036664_3040015_+	host specificity protein J	NA	A0A0K2FI38	Escherichia_phage	68.6	0.0e+00
WP_000178849.1|3040053_3040296_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001144679.1|3040349_3042788_+|tail	tail protein	tail	A0A0K2FIZ6	Escherichia_phage	63.4	2.9e-91
WP_000143167.1|3042787_3043369_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
WP_045180070.1|3043844_3044813_+	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.7	6.0e-194
WP_000334547.1|3045460_3046087_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_010989011.1|3046155_3046455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001525490.1|3046439_3047126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497441.1|3047396_3047588_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_000193770.1|3048014_3050627_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	4.8e-20
WP_000291723.1|3050834_3051845_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001670452.1|3052010_3052553_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224072.1|3052549_3053659_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086485.1|3053757_3055866_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053044.1|3055878_3057786_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
3055990:3056009	attR	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
WP_000333152.1|3057800_3059054_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433416.1|3059058_3060699_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759136.1|3060695_3061259_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|3061514_3061682_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|3061781_3062300_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156448.1|3062368_3064129_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|3064314_3064767_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001670727.1|3064838_3065891_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288732.1|3066247_3066757_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|3066973_3067579_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950876.1|3067565_3069719_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|3069737_3070184_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420513.1|3070307_3072362_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	1.1e-19
WP_000424187.1|3072397_3072856_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847732.1|3072950_3073613_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001537782.1|3073786_3074200_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|3074244_3074562_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140482.1|3074619_3075831_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859429.1|3076045_3076594_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548080.1|3076619_3077399_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000072884.1|3077447_3077729_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904446.1|3077725_3078055_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374046.1|3078141_3078801_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_000938182.1|3079419_3080100_-|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	71.0	9.8e-82
WP_001123039.1|3080321_3081182_-	SPI-2 type III secretion system effector PipB	NA	NA	NA	NA	NA
WP_010989012.1|3081399_3081720_+	membrane protein	NA	E5G6P3	Salmonella_phage	76.6	1.2e-08
>prophage 222
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3087493	3088174	4755838		Bacillus_phage(100.0%)	1	NA	NA
WP_000698208.1|3087493_3088174_-	response regulator transcription factor HprR	NA	W8CYM9	Bacillus_phage	35.6	2.2e-33
>prophage 223
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3101536	3103778	4755838		Phage_258-320(50.0%)	3	NA	NA
WP_001537781.1|3101536_3101899_-	anti-adapter protein IraM	NA	Q20GJ2	Phage_258-320	43.5	2.4e-23
WP_001284251.1|3102552_3102858_-	chaperone modulator CbpM	NA	NA	NA	NA	NA
WP_000420603.1|3102857_3103778_-	curved DNA-binding protein	NA	A0A1V0SIM1	Klosneuvirus	46.7	3.2e-11
>prophage 224
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3110063	3110231	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_001273663.1|3110063_3110231_+	general stress protein	NA	Q9KX95	Enterobacteria_phage	92.6	1.4e-05
>prophage 225
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3118240	3121798	4755838		Cronobacter_phage(33.33%)	3	NA	NA
WP_000533525.1|3118240_3119029_+	phosphate starvation-inducible protein PhoH	NA	R4II13	Cronobacter_phage	77.1	1.9e-92
WP_000433673.1|3119134_3120016_-	MurR/RpiR family transcriptional regulator	NA	A0A2P0VNK5	Tetraselmis_virus	28.9	3.3e-05
WP_000628085.1|3120301_3121798_-	sodium:solute symporter	NA	A0A240F3J2	Aeromonas_phage	22.9	1.3e-17
>prophage 226
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3131332	3132166	4755838		Pelagibacter_phage(100.0%)	1	NA	NA
WP_001137620.1|3131332_3132166_-	curli production assembly/transport protein CsgG	NA	M1ICK2	Pelagibacter_phage	40.5	3.3e-39
>prophage 227
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3136319	3136859	4755838		Scale_drop_disease_virus(100.0%)	1	NA	NA
WP_000203941.1|3136319_3136859_+	O-acetyl-ADP-ribose deacetylase	NA	A0A0K1L687	Scale_drop_disease_virus	49.0	2.9e-28
>prophage 228
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3145922	3146843	4755838		Morganella_phage(100.0%)	1	NA	NA
WP_000163973.1|3145922_3146843_-	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee	NA	A0A1W6JP29	Morganella_phage	40.5	8.1e-55
>prophage 229
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3151502	3151748	4755838		Salmonella_phage(100.0%)	1	NA	NA
WP_001217763.1|3151502_3151748_-	DNA damage-inducible protein I	NA	H6WRY5	Salmonella_phage	52.6	4.1e-14
>prophage 230
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3167758	3168709	4755838		Brevibacillus_phage(100.0%)	1	NA	NA
WP_000578684.1|3167758_3168709_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	S5M633	Brevibacillus_phage	31.8	2.2e-10
>prophage 231
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3182527	3183654	4755838		Trichoplusia_ni_ascovirus(50.0%)	2	NA	NA
WP_000007236.1|3182527_3183262_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.5	1.7e-15
WP_000103754.1|3183417_3183654_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	45.2	1.5e-10
>prophage 232
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3186928	3187570	4755838		Pseudomonas_phage(100.0%)	1	NA	NA
WP_000535396.1|3186928_3187570_+	dTMP kinase	NA	Q2Z0N0	Pseudomonas_phage	35.7	4.2e-26
>prophage 233
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3200729	3200987	4755838		Erwinia_phage(100.0%)	1	NA	NA
WP_000800159.1|3200729_3200987_+	DUF1471 domain-containing protein	NA	A0A1B2IFR9	Erwinia_phage	37.1	2.1e-05
>prophage 234
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3207172	3210898	4755838		Planktothrix_phage(50.0%)	4	NA	NA
WP_001033714.1|3207172_3207874_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	40.7	2.4e-35
WP_000168091.1|3207873_3209118_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA	NA
WP_000291338.1|3209146_3210058_+	N-acetylglucosamine kinase	NA	NA	NA	NA	NA
WP_001191856.1|3210076_3210898_+	NAD-dependent protein deacylase	NA	A0A2I7S9Y2	Vibrio_phage	33.5	1.0e-21
>prophage 235
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3214484	3216468	4755838		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000799392.1|3214484_3215348_-	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	25.4	1.5e-10
WP_000531607.1|3215331_3216468_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	G3M9Y6	Bacillus_virus	34.0	2.1e-28
>prophage 236
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3222788	3224159	4755838		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_000423763.1|3222788_3224159_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	45.3	8.5e-109
>prophage 237
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3227686	3228937	4755838		Phage_21(100.0%)	1	NA	NA
WP_000444508.1|3227686_3228937_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
>prophage 238
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3235562	3236120	4755838		Enterobacterial_phage(100.0%)	1	NA	NA
WP_000789470.1|3235562_3236120_+	virulence membrane protein PagC	NA	Q9LA63	Enterobacterial_phage	33.0	1.0e-15
>prophage 239
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3240745	3241276	4755838		Escherichia_phage(100.0%)	1	NA	NA
WP_000929980.1|3240745_3241276_-	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	70.5	2.8e-36
>prophage 240
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3245823	3246621	4755838		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000950203.1|3245823_3246621_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	31.2	3.6e-11
>prophage 241
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3261746	3265197	4755838		Bacillus_phage(100.0%)	3	NA	NA
WP_001048643.1|3261746_3263240_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	28.3	2.0e-10
WP_000976280.1|3263539_3263758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000219714.1|3263910_3265197_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	36.3	1.3e-10
>prophage 242
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3274605	3275262	4755838		Tupanvirus(100.0%)	1	NA	NA
WP_000184707.1|3274605_3275262_-	bifunctional nicotinamidase/pyrazinamidase	NA	A0A2K9L2K0	Tupanvirus	35.2	7.3e-18
>prophage 243
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3280147	3282097	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_001235866.1|3280147_3282097_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	29.0	1.4e-40
>prophage 244
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3285684	3286911	4755838		Klosneuvirus(100.0%)	1	NA	NA
WP_000059510.1|3285684_3286911_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	28.0	2.5e-27
>prophage 245
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3293609	3294437	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000174981.1|3293609_3294437_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	54.6	5.0e-72
>prophage 246
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3300604	3302857	4755838		Tupanvirus(100.0%)	1	NA	NA
WP_000019102.1|3300604_3302857_-	catalase HPII	NA	A0A2K9L0T1	Tupanvirus	50.2	4.6e-144
>prophage 247
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3313136	3332766	4755838	tRNA	Tupanvirus(22.22%)	19	NA	NA
WP_001144217.1|3313136_3315065_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.7	5.5e-130
WP_001574431.1|3315068_3315611_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.7	4.8e-15
WP_001124225.1|3315706_3315904_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_000124850.1|3315954_3316311_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_001386830.1|3316431_3316476_+	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_000018567.1|3316612_3317596_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	1.1e-33
WP_000672408.1|3317611_3319999_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_001229266.1|3320003_3320303_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
WP_000954982.1|3320505_3321486_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
WP_001181571.1|3321577_3322129_+	glutathione peroxidase	NA	NA	NA	NA	NA
WP_000080607.1|3322128_3322878_+	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	A0A2R8FG22	Brazilian_cedratvirus	28.2	4.6e-08
WP_001213256.1|3322954_3323419_+	lipoprotein	NA	A0A1V0DZX6	Clostridioides_phage	39.4	2.0e-14
WP_000562012.1|3323732_3324446_+	anti-FlhDC factor YdiV	NA	NA	NA	NA	NA
WP_000175677.1|3324507_3325950_+	YdiU family protein	NA	NA	NA	NA	NA
WP_000089115.1|3325985_3326177_-	hemin uptake protein HemP	NA	NA	NA	NA	NA
WP_001082194.1|3326333_3327380_-	3-deoxy-7-phosphoheptulonate synthase AroH	NA	S4W5F1	Pandoravirus	47.8	3.3e-81
WP_000370992.1|3327535_3328369_-	posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR	NA	NA	NA	NA	NA
WP_000069333.1|3328705_3331084_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	36.7	5.5e-172
WP_000117500.1|3331125_3332766_-	medium-chain fatty-acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.1	2.3e-20
>prophage 248
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3355131	3358341	4755838		Cedratvirus(50.0%)	3	NA	NA
WP_000948902.1|3355131_3355878_+	Fe-S cluster assembly ATPase SufC	NA	A0A285PWH2	Cedratvirus	31.4	3.4e-11
WP_000907929.1|3355852_3357124_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000143859.1|3357120_3358341_+	cysteine desulfurase SufS	NA	Q2XUY6	environmental_halophage	40.8	1.7e-92
>prophage 249
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3376221	3380560	4755838		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000122323.1|3376221_3376950_-	MerR family transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	46.9	2.4e-46
WP_000666336.1|3377128_3377767_-	two component system response regulator	NA	NA	NA	NA	NA
WP_001050765.1|3377797_3380560_-	two component system sensor kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	26.9	2.3e-28
>prophage 250
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3404512	3411936	4755838		Orpheovirus(25.0%)	8	NA	NA
WP_000493972.1|3404512_3405154_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	38.3	8.8e-24
WP_000098878.1|3405195_3406344_-	cyclopropane fatty acyl phospholipid synthase	NA	A0A2K9L4K8	Tupanvirus	45.7	4.2e-85
WP_001182323.1|3406633_3407839_-	Bcr/CflA family multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_000269523.1|3407951_3408884_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000190992.1|3408880_3409906_-	HTH-type transcriptional repressor PurR	NA	C6ZCU4	Enterobacteria_phage	31.6	3.1e-31
WP_000102277.1|3410201_3410291_+	YnhF family membrane protein	NA	NA	NA	NA	NA
WP_000007292.1|3410373_3410955_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_001081022.1|3411081_3411936_-	C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	41.0	1.2e-15
>prophage 251
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3417010	3417532	4755838		Salmonella_phage(100.0%)	1	NA	NA
WP_000826820.1|3417010_3417532_+	superoxide dismutase [Cu-Zn] SodC2	NA	Q9MC02	Salmonella_phage	60.3	4.0e-51
>prophage 252
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3424447	3425722	4755838	tRNA	Cronobacter_phage(100.0%)	1	NA	NA
WP_000168626.1|3424447_3425722_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	1.6e-85
>prophage 253
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3447367	3451790	4755838		Bacillus_phage(50.0%)	3	NA	NA
WP_000732956.1|3447367_3448669_-	two-component system sensor histidine kinase RstB	NA	W8CYF6	Bacillus_phage	22.7	5.7e-14
WP_000928666.1|3448779_3450486_-	amidohydrolase	NA	NA	NA	NA	NA
WP_000824313.1|3450638_3451790_-	porin OmpS2	NA	Q1MVN1	Enterobacteria_phage	58.8	1.6e-116
>prophage 254
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3469504	3488786	4755838		Escherichia_phage(40.0%)	19	NA	NA
WP_000593092.1|3469504_3470653_-	osmoprotectant ABC transporter ATP-binding protein OsmV	NA	G9BWD6	Planktothrix_phage	33.9	2.2e-25
WP_000379677.1|3470652_3471300_-	osmoprotectant ABC transporter permease OsmW	NA	NA	NA	NA	NA
WP_001211193.1|3471309_3472212_-	osmoprotectant ABC transporter substrate-binding protein OsmX	NA	NA	NA	NA	NA
WP_000557304.1|3472240_3472951_-	osmoprotectant ABC transporter permease OsmY	NA	NA	NA	NA	NA
WP_000206565.1|3473255_3473870_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	37.8	1.1e-28
WP_000534695.1|3473912_3474770_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000213055.1|3474771_3475389_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	60.1	4.3e-76
WP_000705289.1|3475399_3477835_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	48.1	1.0e-205
WP_000982628.1|3477933_3480375_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.7	7.3e-220
WP_000975516.1|3480528_3480837_-	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_000743122.1|3480940_3481651_+	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_000199997.1|3481691_3482252_-	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_001066440.1|3482287_3482629_-	DUF1283 family protein	NA	NA	NA	NA	NA
WP_000921389.1|3482780_3483107_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	52.9	2.2e-23
WP_000706267.1|3483228_3484443_+	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	5.3e-46
WP_000836495.1|3484453_3485473_+	Zn-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000192118.1|3485526_3486906_+	MHS family MFS transporter	NA	Q6JIH2	Burkholderia_virus	25.8	5.7e-28
WP_001181251.1|3487049_3488516_+	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	30.0	5.6e-42
WP_000989267.1|3488582_3488786_-	putative selenium delivery protein YdfZ	NA	J9Q802	Salmonella_phage	55.2	2.9e-13
>prophage 255
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3498072	3498456	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_000091194.1|3498072_3498456_-	MDR efflux pump AcrAB transcriptional activator MarA	NA	D0R0F8	Streptococcus_phage	32.3	4.7e-09
>prophage 256
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3507392	3508511	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_000758335.1|3507392_3508511_+	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	58.5	1.6e-113
>prophage 257
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3545647	3546658	4755838		Tupanvirus(100.0%)	1	NA	NA
WP_000649201.1|3545647_3546658_+	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	25.9	8.6e-26
>prophage 258
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3553026	3554115	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_000769035.1|3553026_3554115_+	porin OmpD	NA	Q1MVN1	Enterobacteria_phage	75.1	4.0e-154
>prophage 259
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3562277	3563822	4755838		Escherichia_phage(100.0%)	1	NA	NA
WP_000702591.1|3562277_3563822_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	39.5	8.3e-20
>prophage 260
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3571762	3573883	4755838		Salmonella_phage(100.0%)	1	NA	NA
WP_000692054.1|3571762_3573883_+	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	65.6	1.1e-134
>prophage 261
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3591507	3593472	4755838		Phage_TP(100.0%)	1	NA	NA
WP_001249752.1|3591507_3593472_-	U32 family peptidase	NA	Q6DW11	Phage_TP	26.7	8.6e-22
>prophage 262
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3609574	3616664	4755838		Megavirus(33.33%)	5	NA	NA
WP_000933978.1|3609574_3611083_-	carboxylesterase/lipase family protein	NA	L7Y5U6	Megavirus	38.3	7.1e-32
WP_000024092.1|3611131_3612475_-	VOC family protein	NA	NA	NA	NA	NA
WP_000414259.1|3612767_3613691_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000528480.1|3613751_3615377_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.1	6.5e-07
WP_000842135.1|3615545_3616664_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.6	7.6e-31
>prophage 263
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3623203	3623935	4755838		Planktothrix_phage(100.0%)	1	NA	NA
WP_001196340.1|3623203_3623935_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	3.4e-24
>prophage 264
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3627695	3633109	4755838		Escherichia_phage(50.0%)	3	NA	NA
WP_000527280.1|3627695_3628226_-	cytochrome b561	NA	A0A0U2QLA7	Escherichia_phage	43.9	3.5e-18
WP_001098501.1|3628342_3629143_-	YdcF family protein	NA	NA	NA	NA	NA
WP_000139706.1|3629206_3633109_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	28.8	5.5e-52
>prophage 265
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3637901	3638891	4755838		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000762206.1|3637901_3638891_+	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	42.5	1.2e-69
>prophage 266
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3644003	3652053	4755838	tRNA	Morganella_phage(20.0%)	8	NA	NA
WP_001082296.1|3644003_3644438_+	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.1	9.4e-30
WP_000159240.1|3644490_3644829_-	EamA family transporter	NA	NA	NA	NA	NA
WP_001156217.1|3645183_3646119_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	7.2e-144
WP_000123675.1|3646162_3647536_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	9.6e-52
WP_000387374.1|3648022_3649006_-	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_000945620.1|3649151_3650306_-	chemoreceptor protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.8	1.5e-10
WP_001046799.1|3650716_3651280_-	DNA endonuclease SmrA	NA	NA	NA	NA	NA
WP_000945041.1|3651537_3652053_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.5	1.7e-22
>prophage 267
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3662267	3663125	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_012543356.1|3662267_3663125_+	helix-turn-helix domain-containing protein	NA	A0A1B0RXG1	Streptococcus_phage	28.1	2.0e-07
>prophage 268
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3666676	3667546	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000456780.1|3666676_3667546_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	43.2	3.0e-51
>prophage 269
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3686035	3686842	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_000230462.1|3686035_3686842_+	peptide ABC transporter ATP-binding protein SapF	NA	G3M9Y6	Bacillus_virus	27.4	4.6e-14
>prophage 270
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3692220	3696399	4755838		Bodo_saltans_virus(50.0%)	2	NA	NA
WP_000485056.1|3692220_3694155_+	exoribonuclease II	NA	A0A2H4UVB7	Bodo_saltans_virus	23.8	8.6e-06
WP_001670746.1|3694416_3696399_+	cyclic di-GMP phosphodiesterase	NA	G3MA91	Bacillus_virus	32.1	1.3e-17
>prophage 271
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3701983	3702574	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001176284.1|3701983_3702574_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.4	2.9e-42
>prophage 272
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3707660	3712999	4755838	protease	Tupanvirus(33.33%)	4	NA	NA
WP_000513591.1|3707660_3710258_-	type I DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	35.4	2.4e-88
WP_000548616.1|3710660_3710912_+	YciN family protein	NA	NA	NA	NA	NA
WP_000422084.1|3710953_3712000_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	29.5	1.6e-19
WP_000559310.1|3712237_3712999_+	YciK family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	22.2	7.5e-06
>prophage 273
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3717980	3720938	4755838		Acinetobacter_phage(100.0%)	2	NA	NA
WP_000763493.1|3717980_3719576_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	NA	A0A0N7IRD9	Acinetobacter_phage	38.5	1.7e-52
WP_001195301.1|3719579_3720938_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	40.7	3.0e-37
>prophage 274
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3732601	3735494	4755838		Lactobacillus_phage(33.33%)	3	NA	NA
WP_000059071.1|3732601_3733438_-	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	42.4	1.0e-08
WP_000994699.1|3733485_3734490_-	murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF	NA	G3M9Y6	Bacillus_virus	29.1	8.1e-16
WP_000058857.1|3734486_3735494_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.3	1.3e-13
>prophage 275
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3743863	3750271	4755838		Serratia_phage(33.33%)	7	NA	NA
WP_000068097.1|3743863_3744481_-	thymidine kinase	NA	A0A023W530	Serratia_phage	54.2	2.7e-54
WP_001287383.1|3745143_3745557_+	DNA-binding transcriptional regulator H-NS	NA	NA	NA	NA	NA
WP_000729450.1|3745688_3746597_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.5	8.2e-60
WP_000193432.1|3746799_3747813_-	two-component system response regulator RssB	NA	NA	NA	NA	NA
WP_001230575.1|3747903_3748809_-	patatin-like phospholipase RssA	NA	NA	NA	NA	NA
WP_001670750.1|3748919_3749378_+	YchJ family protein	NA	NA	NA	NA	NA
WP_001191156.1|3749428_3750271_+	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	48.8	7.5e-15
>prophage 276
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3754579	3756115	4755838		Escherichia_phage(100.0%)	1	NA	NA
WP_000702629.1|3754579_3756115_-	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	41.4	4.8e-20
>prophage 277
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3766454	3772112	4755838		Mythimna_unipuncta_granulovirus(33.33%)	7	NA	NA
WP_001146392.1|3766454_3766685_-	putative cation transport regulator ChaB	NA	A0A1S5YE01	Mythimna_unipuncta_granulovirus	41.3	1.1e-05
WP_000148418.1|3766951_3768052_+	sodium-potassium/proton antiporter ChaA	NA	NA	NA	NA	NA
WP_000811046.1|3768105_3768960_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	38.8	1.9e-45
WP_001257065.1|3768997_3769807_-	tetratricopeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_000150667.1|3769810_3770200_-	SirB family protein	NA	NA	NA	NA	NA
WP_000347310.1|3770196_3771030_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000804703.1|3771029_3772112_-	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	41.6	8.7e-08
>prophage 278
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3775459	3778217	4755838		Tupanvirus(50.0%)	2	NA	NA
WP_001518537.1|3775459_3776407_+	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	37.8	8.6e-44
WP_001037188.1|3776531_3778217_+	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	23.4	2.3e-23
>prophage 279
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3815106	3822419	4755838	tRNA	Staphylococcus_phage(33.33%)	7	NA	NA
WP_000758418.1|3815106_3816792_-	long-chain-fatty-acid--CoA ligase FadD	NA	A0A2H4PQM9	Staphylococcus_phage	26.0	3.8e-34
WP_000290594.1|3816996_3817578_-	Slp family lipoprotein	NA	NA	NA	NA	NA
WP_001221014.1|3817649_3818345_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000128803.1|3818402_3820313_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	32.7	4.5e-92
WP_000029550.1|3820444_3820789_+	RidA family protein	NA	NA	NA	NA	NA
WP_000457328.1|3820794_3820974_-	YoaH family protein	NA	NA	NA	NA	NA
WP_000978458.1|3821054_3822419_+	aminodeoxychorismate synthase component 1	NA	A0A0B5J984	Pandoravirus	34.8	9.5e-44
>prophage 280
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3826389	3827949	4755838		Moraxella_phage(100.0%)	1	NA	NA
WP_000421820.1|3826389_3827949_-	CNNM family cation transport protein YoaE	NA	A0A0R6PEZ3	Moraxella_phage	44.4	9.5e-40
>prophage 281
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3835435	3835645	4755838		Morganella_phage(100.0%)	1	NA	NA
WP_001062678.1|3835435_3835645_-	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	78.1	1.6e-22
>prophage 282
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3841021	3843070	4755838		Moraxella_phage(100.0%)	1	NA	NA
WP_001091239.1|3841021_3843070_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
>prophage 283
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3850576	3853701	4755838		Escherichia_phage(50.0%)	4	NA	NA
WP_000986175.1|3850576_3851227_-	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	50.9	2.7e-57
WP_001134856.1|3851450_3851615_-	membrane protein	NA	NA	NA	NA	NA
WP_000182072.1|3851899_3852622_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA	NA
WP_000422887.1|3853305_3853701_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	32.8	7.0e-16
>prophage 284
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3862332	3864739	4755838	integrase	Klebsiella_phage(50.0%)	3	3858259:3858274	3873292:3873307
3858259:3858274	attL	CACTTCTTCTTTTTCA	NA	NA	NA	NA
WP_001752421.1|3862332_3862602_+	hypothetical protein	NA	Q6UAV5	Klebsiella_phage	39.0	1.5e-06
WP_001617922.1|3862766_3862907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000684835.1|3864370_3864739_+|integrase	tyrosine-type recombinase/integrase	integrase	K7PHK0	Enterobacteria_phage	39.8	5.4e-18
3873292:3873307	attR	TGAAAAAGAAGAAGTG	NA	NA	NA	NA
>prophage 285
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3870001	3878911	4755838	integrase,tail	Salmonella_phage(40.0%)	11	3872079:3872093	3882970:3882984
WP_000275417.1|3870001_3870883_-|tail	tail assembly protein	tail	A0A0M4RTP2	Salmonella_phage	74.9	1.4e-64
WP_001521334.1|3871355_3871544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000789530.1|3871608_3871776_+	lytic enzyme	NA	NA	NA	NA	NA
3872079:3872093	attL	CGTTCACACGTCATT	NA	NA	NA	NA
WP_001013469.1|3872563_3872851_-	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	92.7	8.1e-38
WP_000087646.1|3873984_3875064_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	8.7e-101
WP_000722368.1|3875436_3875790_-	YebY family protein	NA	NA	NA	NA	NA
WP_000979686.1|3875806_3876682_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA	NA
WP_000168395.1|3876682_3877057_-	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
WP_000856224.1|3877194_3877425_+	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
WP_000100249.1|3877532_3878189_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_000944285.1|3878212_3878911_+	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
3882970:3882984	attR	CGTTCACACGTCATT	NA	NA	NA	NA
>prophage 286
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3886810	3888286	4755838		Cyanophage(100.0%)	1	NA	NA
WP_000301711.1|3886810_3888286_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
>prophage 287
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3892223	3900211	4755838		Bacillus_virus(50.0%)	9	NA	NA
WP_001184031.1|3892223_3893543_-	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	40.9	2.6e-14
WP_000939594.1|3893558_3894503_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
WP_000203023.1|3894581_3895337_+	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	29.4	8.5e-18
WP_000571510.1|3895333_3896119_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_000568504.1|3896197_3897208_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.9	2.4e-07
WP_000580335.1|3897216_3897828_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000227324.1|3898187_3898880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000716750.1|3899088_3899688_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_000022509.1|3899689_3900211_-	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	2.6e-10
>prophage 288
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3904232	3910792	4755838	tRNA	Escherichia_coli_phage(33.33%)	7	NA	NA
WP_000639226.1|3904232_3905051_+	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	80.3	4.5e-57
WP_000252975.1|3905103_3905499_+	membrane protein	NA	NA	NA	NA	NA
WP_000019607.1|3905539_3906283_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.9	4.1e-25
WP_000569035.1|3906279_3907251_+|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
WP_001185764.1|3907486_3908233_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000024795.1|3908252_3908822_-	VOC family protein	NA	NA	NA	NA	NA
WP_001025360.1|3909058_3910792_+|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	33.4	4.9e-85
>prophage 289
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3918744	3922886	4755838		Bacillus_thuringiensis_phage(66.67%)	4	NA	NA
WP_000763861.1|3918744_3919134_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	30.4	2.2e-06
WP_000036389.1|3919151_3920201_-	protein-glutamate methylesterase/protein glutamine deamidase	NA	Q56AR1	Bacillus_thuringiensis_phage	32.8	1.0e-05
WP_000204362.1|3920197_3921064_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
WP_000483262.1|3921224_3922886_-	methyl-accepting chemotaxis protein II	NA	A0A2H4J162	uncultured_Caudovirales_phage	25.0	1.3e-10
>prophage 290
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3938151	3938817	4755838		Sphingomonas_phage(100.0%)	1	NA	NA
WP_000781521.1|3938151_3938817_-	YecA family protein	NA	H9NBT7	Sphingomonas_phage	62.1	1.5e-05
>prophage 291
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3947081	3947834	4755838		Bacillus_virus(100.0%)	1	NA	NA
WP_001273040.1|3947081_3947834_-	L-cystine ABC transporter ATP-binding protein YecC	NA	G3M9Y6	Bacillus_virus	34.5	1.9e-25
>prophage 292
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3957410	3958379	4755838	transposase	Salmonella_phage(100.0%)	1	NA	NA
WP_000654811.1|3957410_3958379_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	91.6	1.7e-172
>prophage 293
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	3976581	3991817	4755838		Burkholderia_phage(20.0%)	17	NA	NA
WP_001119834.1|3976581_3978294_-	cellulose biosynthesis regulator YedQ	NA	A0A127AWB9	Bacillus_phage	37.4	1.6e-19
WP_001178599.1|3978458_3978704_-	YodC family protein	NA	NA	NA	NA	NA
WP_000929134.1|3978720_3979632_-	DUF808 domain-containing protein	NA	NA	NA	NA	NA
WP_001212259.1|3979807_3980728_+	drug/metabolite exporter YedA	NA	NA	NA	NA	NA
WP_000785981.1|3980716_3981187_-	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	46.9	1.6e-30
WP_001157313.1|3981167_3982598_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
WP_000377036.1|3982671_3983367_-	phosphohydrolase	NA	S4W232	Pandoravirus	28.0	2.8e-07
WP_000107431.1|3983446_3983758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001080660.1|3984407_3985604_+	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.1	5.1e-110
WP_024131109.1|3985861_3986050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208509.1|3986060_3986273_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
WP_000457658.1|3986727_3987996_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	92.2	1.4e-227
WP_000394197.1|3987998_3988418_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
WP_001529333.1|3988544_3988706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000598921.1|3989186_3989984_+	DgsA anti-repressor MtfA	NA	NA	NA	NA	NA
WP_001670523.1|3990355_3990646_+	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	50.9	1.0e-08
WP_001219019.1|3991292_3991817_+	peptidase	NA	G9L6C4	Escherichia_phage	77.7	1.3e-36
>prophage 294
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4002371	4002674	4755838		Dichelobacter_phage(100.0%)	1	NA	NA
WP_001219031.1|4002371_4002674_+	DUF4102 domain-containing protein	NA	A7X7X0	Dichelobacter_phage	51.9	3.7e-09
>prophage 295
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4005959	4006436	4755838		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_001101539.1|4005959_4006436_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	53.2	6.0e-38
>prophage 296
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4012458	4013274	4755838		Amsacta_moorei_entomopoxvirus(100.0%)	1	NA	NA
WP_000881543.1|4012458_4013274_-	energy-coupling factor ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	25.1	4.5e-09
>prophage 297
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4026786	4027581	4755838		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_001000023.1|4026786_4027581_-	propanediol diffusion facilitator PduF	NA	A0A1J0F964	Only_Syngen_Nebraska_virus	27.2	1.2e-11
>prophage 298
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4047288	4052215	4755838		Escherichia_phage(66.67%)	4	NA	NA
WP_000925044.1|4047288_4048461_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	NA	B6DZZ7	Stx2-converting_phage	88.2	2.1e-201
WP_001092563.1|4048584_4049349_-	thiosulfate reductase cytochrome B subunit	NA	NA	NA	NA	NA
WP_001016236.1|4049345_4049924_-	thiosulfate reductase electron transport protein PhsB	NA	A0A077SL61	Escherichia_phage	38.2	3.9e-23
WP_000028220.1|4049938_4052215_-	thiosulfate reductase PhsA	NA	A0A077SK27	Escherichia_phage	26.9	4.2e-36
>prophage 299
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4060901	4061801	4755838		Cellulophaga_phage(100.0%)	1	NA	NA
WP_000886600.1|4060901_4061801_+	ATP phosphoribosyltransferase	NA	A0A0F7Q4B0	Cellulophaga_phage	100.0	1.7e-12
>prophage 300
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4069244	4072054	4755838		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000704825.1|4069244_4070411_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	53.5	2.4e-112
WP_000043532.1|4070647_4072054_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.3	1.2e-36
>prophage 301
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4075170	4076592	4755838		Hokovirus(100.0%)	1	NA	NA
WP_000040079.1|4075170_4076592_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	31.3	5.4e-58
>prophage 302
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4084949	4095456	4755838		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126351.1|4084949_4086263_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	9.1e-52
WP_000565902.1|4086289_4087369_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.3e-16
WP_000648783.1|4087373_4088147_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018224.1|4088162_4089137_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973714.1|4089142_4089694_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.0e-52
WP_000857530.1|4089694_4090573_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.8	5.1e-107
WP_001023659.1|4090620_4091520_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000697840.1|4091519_4092605_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
WP_000981471.1|4092981_4093875_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001111837.1|4094052_4095456_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
>prophage 303
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4101013	4107719	4755838		Bacillus_phage(25.0%)	6	NA	NA
WP_000164202.1|4101013_4102384_-	phosphomannomutase CpsG	NA	A0A127AWJ1	Bacillus_phage	27.2	4.9e-32
WP_000605957.1|4102494_4103937_-	mannose-1-phosphate guanyltransferase	NA	A0A1V0SH58	Hokovirus	29.7	9.4e-50
WP_000699631.1|4103933_4105157_-	colanic acid biosynthesis fucosyltransferase WcaI	NA	NA	NA	NA	NA
WP_001669238.1|4105153_4105627_-	GDP-mannose mannosyl hydrolase	NA	NA	NA	NA	NA
WP_001041688.1|4105629_4106595_-	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	50.5	1.2e-85
WP_000048160.1|4106597_4107719_-	GDP-mannose 4,6-dehydratase	NA	M1HXY1	Acanthocystis_turfacea_Chlorella_virus	65.3	6.9e-133
>prophage 304
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4112894	4122194	4755838		Streptococcus_phage(25.0%)	7	NA	NA
WP_000136406.1|4112894_4115054_-	tyrosine-protein kinase Wzc	NA	A0A1X9I5D6	Streptococcus_phage	30.8	5.4e-17
WP_000482224.1|4115050_4115500_-	low molecular weight protein-tyrosine-phosphatase Wzb	NA	NA	NA	NA	NA
WP_000978077.1|4115505_4116645_-	polysaccharide export protein	NA	NA	NA	NA	NA
WP_000454713.1|4117319_4118900_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	45.4	1.1e-38
WP_001252269.1|4118985_4120842_-	outer membrane assembly protein AsmA	NA	NA	NA	NA	NA
WP_001234783.1|4120880_4121462_-	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	43.2	9.3e-33
WP_000132080.1|4121552_4122194_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	36.9	5.5e-34
>prophage 305
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4132641	4139253	4755838		Bacillus_phage(66.67%)	4	NA	NA
WP_001210108.1|4132641_4135722_+	multidrug efflux RND transporter permease subunit MdtC	NA	S5VTK5	Leptospira_phage	23.1	2.1e-62
WP_000137818.1|4135718_4137131_+	MFS transporter	NA	NA	NA	NA	NA
WP_000870074.1|4137130_4138534_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	6.2e-30
WP_000137850.1|4138530_4139253_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.6	1.1e-30
>prophage 306
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4143677	4146536	4755838	tRNA	Phage_TP(50.0%)	2	NA	NA
WP_001669237.1|4143677_4145039_+|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.5	7.4e-206
WP_077906277.1|4145489_4146536_+	type III secretion system effector arginine glycosyltransferase	NA	Q8HAB2	Salmonella_phage	75.8	8.4e-149
>prophage 307
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4163546	4172717	4755838	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195330.1|4163546_4165580_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703137.1|4165820_4166279_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_001197951.1|4166450_4166981_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|4167037_4167505_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|4167551_4168271_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272850.1|4168267_4169953_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_001240417.1|4170175_4170907_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|4170966_4171074_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|4171054_4171786_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569168.1|4171769_4172717_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
>prophage 308
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4198771	4200292	4755838		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_000535908.1|4198771_4200292_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.9	1.0e-09
>prophage 309
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4204251	4204920	4755838		Cellulophaga_phage(100.0%)	1	NA	NA
WP_001139611.1|4204251_4204920_-	GTP cyclohydrolase I FolE	NA	M1Q6X8	Cellulophaga_phage	56.3	4.1e-56
>prophage 310
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4210359	4212351	4755838		Acinetobacter_phage(100.0%)	1	NA	NA
WP_000488255.1|4210359_4212351_-	catecholate siderophore receptor CirA	NA	A0A0P0I887	Acinetobacter_phage	37.9	6.7e-14
>prophage 311
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4216466	4217324	4755838		Catovirus(100.0%)	1	NA	NA
WP_000873920.1|4216466_4217324_+	deoxyribonuclease IV	NA	A0A1V0SBL9	Catovirus	28.5	2.9e-22
>prophage 312
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4227464	4228037	4755838		Clostridioides_phage(100.0%)	1	NA	NA
WP_000241015.1|4227464_4228037_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA	A0A1V0DZX6	Clostridioides_phage	38.9	8.1e-13
>prophage 313
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4233960	4249081	4755838	tail	Vibrio_phage(33.33%)	11	NA	NA
WP_000203619.1|4233960_4235550_+	microcin C ABC transporter ATP-binding protein YejF	NA	G9BWD6	Planktothrix_phage	32.1	3.2e-19
WP_001094639.1|4235553_4235898_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000213349.1|4236288_4237479_-	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	22.2	5.4e-19
WP_001234836.1|4237506_4238202_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA	NA
WP_000578121.1|4238353_4240114_+	DEAD/DEAH box helicase	NA	M4Q3N1	Vibrio_phage	41.6	1.9e-100
WP_000494192.1|4240238_4240523_+	50S ribosomal protein L25	NA	NA	NA	NA	NA
WP_000050806.1|4241278_4242286_-	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	48.3	4.5e-83
WP_001135906.1|4242465_4242693_+	YejL family protein	NA	NA	NA	NA	NA
WP_000256150.1|4242724_4244485_+	cardiolipin transport protein PbgA	NA	NA	NA	NA	NA
WP_001115841.1|4245255_4247622_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	NA	Q9MBL9	Phage_Gifsy-2	88.7	2.9e-72
WP_024131629.1|4248289_4249081_-|tail	tail protein	tail	Q1MVL8	Enterobacteria_phage	31.6	9.7e-49
>prophage 314
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4265106	4270924	4755838		Bacillus_phage(33.33%)	5	NA	NA
WP_000421572.1|4265106_4266750_-	multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.4	2.2e-10
WP_000884988.1|4266825_4267476_-	DNA oxidative demethylase AlkB	NA	NA	NA	NA	NA
WP_000975968.1|4267478_4268540_-	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA	A0A167R6J9	Powai_lake_megavirus	58.0	1.4e-18
WP_000784304.1|4268620_4269673_-	FAD:protein FMN transferase ApbE	NA	NA	NA	NA	NA
WP_000865526.1|4269787_4270924_-	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	58.8	6.6e-115
>prophage 315
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4275091	4282304	4755838		Hokovirus(33.33%)	3	NA	NA
WP_000876086.1|4275091_4277938_-	two-component system sensor histidine kinase RcsC	NA	A0A1V0SGX0	Hokovirus	26.4	4.1e-41
WP_001281271.1|4278055_4280692_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	30.7	4.3e-93
WP_000705590.1|4281101_4282304_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	36.3	4.6e-58
>prophage 316
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4285744	4292944	4755838		Pseudomonas_phage(50.0%)	6	NA	NA
WP_001076499.1|4285744_4288030_+	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	63.6	2.1e-282
WP_000332026.1|4288142_4289273_+	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	79.4	8.7e-176
WP_000533921.1|4289272_4289527_+	ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE	NA	G9IAA2	Pseudomonas_phage	74.6	3.1e-25
WP_000660245.1|4289528_4290719_-	MFS transporter	NA	NA	NA	NA	NA
WP_000176719.1|4290880_4291759_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000858952.1|4291873_4292944_-	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	46.0	5.1e-08
>prophage 317
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4302557	4303763	4755838		Oenococcus_phage(100.0%)	1	NA	NA
WP_001530644.1|4302557_4303763_-	L-rhamnonate dehydratase	NA	Q6A202	Oenococcus_phage	28.3	3.5e-26
>prophage 318
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4307410	4312418	4755838		Tupanvirus(50.0%)	4	NA	NA
WP_000879259.1|4307410_4308016_-	lipopolysaccharide core heptose(II)-phosphate phosphatase	NA	A0A2L1IV13	Escherichia_phage	43.8	1.9e-12
WP_001279284.1|4308313_4309453_+	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.3	2.0e-31
WP_000458894.1|4309455_4310439_+	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	NA	A8CG95	Salmonella_phage	32.7	1.7e-34
WP_000648772.1|4310435_4312418_+	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	NA	A0A2K9KZK0	Tupanvirus	26.8	7.9e-23
>prophage 319
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4324985	4325990	4755838		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000368554.1|4324985_4325990_+	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	25.0	3.5e-27
>prophage 320
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4344842	4348128	4755838		Salmonella_phage(50.0%)	3	NA	NA
WP_000813882.1|4344842_4345442_+	5'-deoxynucleotidase	NA	A0A2L0V156	Salmonella_phage	38.6	7.0e-07
WP_001012856.1|4345547_4347374_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_001555201.1|4347450_4348128_-	sugar phosphatase	NA	M1IMD4	Acanthocystis_turfacea_Chlorella_virus	33.3	9.3e-08
>prophage 321
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4358936	4359956	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_000026949.1|4358936_4359956_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.7	3.2e-20
>prophage 322
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4363684	4364458	4755838		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_001293591.1|4363684_4364458_-	histidine ABC transporter ATP-binding protein HisP	NA	M1I0T9	Acanthocystis_turfacea_Chlorella_virus	29.1	1.7e-10
>prophage 323
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4375887	4377405	4755838		Mollivirus(100.0%)	1	NA	NA
WP_000334205.1|4375887_4377405_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	44.0	6.3e-89
>prophage 324
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4383906	4385043	4755838		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000699178.1|4383906_4385043_-	4-phosphoerythronate dehydrogenase PdxB	NA	A0A2R8FDS8	Brazilian_cedratvirus	29.1	3.8e-22
>prophage 325
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4388049	4388835	4755838		Ralstonia_phage(50.0%)	2	NA	NA
WP_000433426.1|4388049_4388298_+	transcriptional regulator	NA	A0A0M4UV99	Ralstonia_phage	60.0	6.2e-18
WP_000118257.1|4388466_4388835_+	hypothetical protein	NA	H6SUH4	Campylobacter_virus	37.9	3.9e-08
>prophage 326
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4396092	4397178	4755838		Pandoravirus(100.0%)	1	NA	NA
WP_000918456.1|4396092_4397178_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.8	5.3e-90
>prophage 327
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4406358	4407300	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_000377772.1|4406358_4407300_+	membrane protein	NA	E7DYY8	Enterobacteria_phage	88.2	1.4e-147
>prophage 328
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4416075	4416996	4755838		Morganella_phage(100.0%)	1	NA	NA
WP_000484425.1|4416075_4416996_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	53.1	3.2e-75
>prophage 329
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4438270	4448120	4755838		Lactobacillus_phage(25.0%)	9	NA	NA
WP_001109832.1|4438270_4439197_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	25.4	2.0e-08
WP_000765581.1|4439286_4440285_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
WP_001519708.1|4440281_4440500_-	DUF3820 family protein	NA	NA	NA	NA	NA
WP_000433279.1|4440501_4442517_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	42.9	8.8e-147
WP_000983128.1|4442588_4443575_-	cell division protein ZipA	NA	NA	NA	NA	NA
WP_000255008.1|4443806_4444568_+	sulfate transporter CysZ	NA	NA	NA	NA	NA
WP_000036904.1|4444731_4445703_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	51.0	7.4e-75
WP_000487600.1|4446086_4446344_+	phosphocarrier protein Hpr	NA	NA	NA	NA	NA
WP_000623118.1|4446392_4448120_+	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	A0A1V0SGR7	Hokovirus	31.1	7.4e-17
>prophage 330
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4453152	4462714	4755838		Streptococcus_phage(20.0%)	11	NA	NA
WP_001093888.1|4453152_4454064_-	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	41.8	1.7e-57
WP_000021076.1|4454131_4455229_-	sulfate/thiosulfate ABC transporter ATP-binding protein CysA	NA	G9BWD6	Planktothrix_phage	38.5	7.0e-29
WP_000852705.1|4455218_4456094_-	sulfate/thiosulfate ABC transporter permease CysW	NA	NA	NA	NA	NA
WP_000881746.1|4456093_4456927_-	sulfate/thiosulfate ABC transporter permease CysT	NA	NA	NA	NA	NA
WP_000290189.1|4456926_4457943_-	thiosulfate/sulfate ABC transporter substrate-binding protein CysP	NA	NA	NA	NA	NA
WP_000517460.1|4458100_4458892_-	SDR family oxidoreductase UcpA	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.6	1.5e-17
WP_000084583.1|4459139_4460039_-	porphyrinogen peroxidase	NA	S4VVJ7	Pandoravirus	33.3	3.8e-25
WP_000838968.1|4460133_4460709_-	RpoE-regulated lipoprotein	NA	NA	NA	NA	NA
WP_000842940.1|4460770_4461220_-	DUF2919 domain-containing protein	NA	NA	NA	NA	NA
WP_014344511.1|4461206_4461743_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
WP_000102880.1|4461844_4462714_+	N-acetylmuramoyl-L-alanine amidase AmiA	NA	A0A0N9SGH1	Paenibacillus_phage	31.9	2.8e-17
>prophage 331
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4482334	4483285	4755838		Cyanophage(100.0%)	1	NA	NA
WP_001072436.1|4482334_4483285_+	transaldolase	NA	A0A127KNC6	Cyanophage	30.3	4.8e-10
>prophage 332
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4501908	4502622	4755838		Synechococcus_phage(100.0%)	1	NA	NA
WP_001171630.1|4501908_4502622_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	37.5	9.1e-38
>prophage 333
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4505960	4507100	4755838		Streptococcus_phage(100.0%)	1	NA	NA
WP_000706377.1|4505960_4507100_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.8	5.5e-45
>prophage 334
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4512682	4517957	4755838		uncultured_Caudovirales_phage(25.0%)	6	NA	NA
WP_000132648.1|4512682_4513042_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	45.6	1.1e-18
WP_000100388.1|4513068_4513794_-	DnaA inactivator Hda	NA	NA	NA	NA	NA
WP_000198339.1|4513864_4515154_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	36.6	6.6e-63
WP_000706208.1|4515241_4515868_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000130477.1|4516281_4517319_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	41.8	2.9e-69
WP_001028589.1|4517318_4517957_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	43.4	9.6e-31
>prophage 335
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4524419	4524611	4755838		Escherichia_phage(100.0%)	1	NA	NA
WP_000075892.1|4524419_4524611_+	DUF2633 family protein	NA	G9L6F2	Escherichia_phage	82.5	1.4e-22
>prophage 336
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4527657	4536369	4755838		Klosneuvirus(33.33%)	3	NA	NA
WP_000944174.1|4527657_4529124_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	4.0e-88
WP_000953179.1|4529284_4530634_+	exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	35.3	5.7e-41
WP_071844015.1|4530795_4536369_-	fibronectin-binding autotransporter adhesin ShdA	NA	A0A2L1IV18	Escherichia_phage	26.3	1.1e-26
>prophage 337
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4562582	4567831	4755838		Escherichia_phage(66.67%)	5	NA	NA
WP_000963846.1|4562582_4563014_-	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	37.1	1.1e-17
WP_000247791.1|4563134_4563998_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_000544873.1|4563997_4564807_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000077440.1|4564799_4565429_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	55.9	4.7e-62
WP_000508277.1|4565425_4567831_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	38.4	2.5e-140
>prophage 338
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4578630	4693880	4755838	terminase,transposase,protease,portal,head,tail,integrase,lysis,tRNA,capsid,holin	Salmonella_phage(30.43%)	123	4612242:4612257	4682669:4682684
WP_000133541.1|4578630_4579914_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	38.2	1.2e-35
WP_000523621.1|4580160_4580361_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_001124466.1|4580372_4580708_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_001196659.1|4580709_4582560_-	Fe-S protein assembly chaperone HscA	NA	A0A167RF67	Powai_lake_megavirus	39.0	8.0e-102
WP_000384398.1|4582572_4583088_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_000028949.1|4583283_4583607_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	47.7	2.0e-21
WP_000331704.1|4583635_4584022_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.9	2.4e-53
WP_000775263.1|4584049_4585264_-	cysteine desulfurase	NA	A0A1X7C038	Faustovirus	32.6	1.2e-34
WP_001241346.1|4585444_4585939_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_000940030.1|4586098_4586830_-|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
WP_000553473.1|4586948_4587752_+	inositol-1-monophosphatase	NA	NA	NA	NA	NA
WP_000174939.1|4587896_4588775_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	24.7	6.0e-15
WP_000985200.1|4588956_4590000_+	anaerobic sulfite reductase subunit A	NA	NA	NA	NA	NA
WP_000017587.1|4590003_4590822_+	anaerobic sulfite reductase subunit B	NA	NA	NA	NA	NA
WP_000020685.1|4590832_4591846_+	sulfite reductase subunit C	NA	NA	NA	NA	NA
WP_000111025.1|4591846_4592833_-	nickel/cobalt transporter	NA	NA	NA	NA	NA
WP_000805728.1|4592823_4593462_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_000982964.1|4593587_4594865_+	stationary phase inducible protein CsiE	NA	NA	NA	NA	NA
WP_001173729.1|4594859_4595999_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
WP_000919178.1|4596194_4597448_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	1.3e-100
WP_000883146.1|4597772_4598963_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_001187150.1|4599144_4600689_+	CadC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000100008.1|4601049_4602381_+	cadaverine/lysine antiporter	NA	NA	NA	NA	NA
WP_001100652.1|4602463_4604608_+	lysine decarboxylase CadA	NA	NA	NA	NA	NA
WP_000856793.1|4604663_4606124_+	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	28.8	1.7e-46
WP_000717694.1|4606172_4606511_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
WP_000625591.1|4606587_4607925_-	two-component system response regulator GlrR	NA	W8CYM9	Bacillus_phage	29.2	1.8e-10
WP_001054239.1|4607921_4608686_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA	NA
WP_001670672.1|4608687_4610118_-	two component system sensor histidine kinase QseE/GlrK	NA	W8CYF6	Bacillus_phage	26.1	2.0e-15
WP_000970062.1|4610767_4614655_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	57.6	8.0e-128
4612242:4612257	attL	AACGCGGAAATCACCA	NA	NA	NA	NA
WP_001667158.1|4614679_4614910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000734248.1|4614910_4616455_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA	NA
WP_001134572.1|4616505_4617057_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_000253558.1|4617081_4617717_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
WP_000361663.1|4617720_4619082_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001048530.1|4619092_4619986_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
WP_000995694.1|4620101_4620950_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000684023.1|4620988_4621906_-	oxidoreductase	NA	NA	NA	NA	NA
WP_001276364.1|4621927_4623124_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_001022472.1|4623239_4624166_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.4	1.8e-09
WP_001196291.1|4624203_4624464_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.5	4.9e-18
WP_000986042.1|4624575_4624956_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_000818972.1|4624955_4625687_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_000399380.1|4625698_4626427_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_000102232.1|4626438_4627344_-	GTPase Era	NA	NA	NA	NA	NA
WP_001068341.1|4627340_4628021_-	ribonuclease III	NA	A0A2K9L5P0	Tupanvirus	31.8	7.4e-21
WP_000002559.1|4628294_4629269_-	signal peptidase I	NA	NA	NA	NA	NA
WP_000790154.1|4629285_4631085_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	7.2e-23
WP_010989047.1|4631489_4632983_+	type III secretion effector GogB	NA	Q9MBM1	Phage_Gifsy-1	100.0	3.4e-260
WP_001542312.1|4633479_4633617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015589559.1|4634329_4634494_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_015701342.1|4635073_4635139_-	DUF4113 domain-containing protein	NA	NA	NA	NA	NA
WP_001738443.1|4635201_4635414_-	helix-turn-helix domain-containing protein	NA	S4TTF2	Salmonella_phage	90.6	3.8e-08
WP_010989049.1|4635520_4635748_+	PagK-like protein	NA	NA	NA	NA	NA
WP_000143154.1|4635844_4636423_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	88.9	3.6e-93
WP_000593433.1|4636412_4637237_-|tail	tail protein	tail	A0A0M4QWS3	Salmonella_phage	92.0	1.2e-145
WP_001144691.1|4637233_4639606_-|tail	tail protein	tail	A0A0K2FIZ6	Escherichia_phage	65.6	1.1e-90
WP_000178853.1|4639659_4639902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000514917.1|4639940_4643303_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	79.7	0.0e+00
WP_000246126.1|4643364_4644012_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	77.7	2.1e-89
WP_000662739.1|4643909_4644647_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	5.2e-129
WP_001152689.1|4644653_4645352_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	5.5e-104
WP_000447369.1|4645361_4645691_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	70.4	1.3e-42
WP_000372072.1|4645693_4648789_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.3	6.1e-280
WP_010989052.1|4648760_4649099_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
WP_000479607.1|4649095_4649491_-|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
WP_000971954.1|4649541_4650288_-|tail	tail protein	tail	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
WP_000033885.1|4650295_4650697_-|tail	tail protein	tail	Q9G0F3	Phage_Gifsy-1	100.0	8.1e-52
WP_000817263.1|4650805_4651936_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	100.0	9.2e-218
WP_000677089.1|4651984_4652563_-|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.2	3.7e-82
WP_000083294.1|4652590_4652974_-|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	55.6	9.2e-29
WP_000201486.1|4652984_4653344_-	DNA packaging protein	NA	NA	NA	NA	NA
WP_000522566.1|4653401_4654430_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	61.1	1.7e-114
WP_000011260.1|4654484_4654832_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	52.7	9.2e-20
WP_001189503.1|4654844_4656341_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	52.2	8.1e-97
WP_000831821.1|4656330_4657911_-|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
WP_000201415.1|4657907_4658111_-|head,tail	head-tail joining protein	head,tail	K7PM10	Enterobacteria_phage	73.8	1.9e-17
WP_000623091.1|4658094_4660026_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	65.7	6.3e-259
WP_001102153.1|4659997_4660543_-|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
WP_000669690.1|4660829_4661231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001533543.1|4661466_4661919_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	92.7	2.9e-66
WP_000984581.1|4661936_4662389_-	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	5.1e-79
WP_001574216.1|4662372_4662702_-|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_001110783.1|4662977_4663664_+|protease	type III secretion system effector protease GogA	protease	Q9MBM2	Phage_Gifsy-1	100.0	9.4e-133
WP_000657897.1|4663878_4664067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000211410.1|4664573_4665137_-	ORF6N domain-containing protein	NA	A0A0P0ZC44	Stx2-converting_phage	92.2	7.6e-56
WP_001097241.1|4665409_4666087_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	54.0	7.7e-63
WP_000801757.1|4666083_4666224_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
WP_001096550.1|4666220_4666832_-	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.0	1.2e-91
WP_000929791.1|4667040_4667643_-	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	99.0	2.8e-109
WP_014343878.1|4667677_4667926_-	hypothetical protein	NA	A0A0U2C0C8	Salmonella_phage	100.0	1.6e-42
WP_001217669.1|4668042_4668276_-	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
WP_000877757.1|4668518_4669151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000664368.1|4669258_4669957_-	DUF550 domain-containing protein	NA	A0A0M4RTV1	Salmonella_phage	85.7	2.1e-63
WP_000801764.1|4669970_4670666_-	hypothetical protein	NA	G8C7U6	Escherichia_phage	45.4	2.1e-55
WP_000024044.1|4670662_4671547_-	replication protein	NA	K7PGT1	Enterobacteria_phage	47.2	1.3e-46
WP_010835408.1|4671638_4672013_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	98.4	1.9e-63
WP_000643689.1|4671972_4672215_-	Rha family transcriptional regulator	NA	A0A0M4QX15	Salmonella_phage	64.1	2.1e-23
WP_000660736.1|4672314_4672710_+	helix-turn-helix domain-containing protein	NA	K7PM35	Enterobacteria_phage	61.4	1.9e-37
WP_001111772.1|4672768_4673608_+	AAA family ATPase	NA	A0A1X9IGI7	Lactococcus_phage	33.3	1.5e-31
WP_000356948.1|4673600_4673987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000950426.1|4673986_4674649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000917562.1|4675105_4675264_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	9.0e-23
WP_001539619.1|4675285_4675636_+	hypothetical protein	NA	S4TSN6	Salmonella_phage	97.4	1.1e-60
WP_000017125.1|4675762_4678690_+	exodeoxyribonuclease	NA	S4TNL0	Salmonella_phage	99.3	0.0e+00
WP_077248255.1|4678652_4679810_+	recombinase RecT	NA	S4TTE8	Salmonella_phage	99.5	3.9e-216
WP_001237031.1|4679852_4680092_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_001670787.1|4680132_4680417_+	excisionase Xis	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
WP_001007939.1|4680394_4681624_-|integrase	site-specific integrase	integrase	H6WRW7	Salmonella_phage	94.4	2.9e-233
WP_000589050.1|4682121_4682601_-	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
WP_000812017.1|4682597_4683554_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
4682669:4682684	attR	TGGTGATTTCCGCGTT	NA	NA	NA	NA
WP_001168374.1|4683553_4684204_-	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
WP_000003307.1|4684235_4684811_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_014344135.1|4684807_4684972_-	rpoE leader peptide RseD	NA	NA	NA	NA	NA
WP_000989165.1|4685235_4686858_+	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_000083342.1|4686842_4687580_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|4687709_4689044_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001670786.1|4689061_4689961_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188414.1|4690063_4690651_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|4690712_4691096_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179978.1|4691414_4692104_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
WP_000997365.1|4692219_4693257_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098732.1|4693460_4693880_+	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
>prophage 339
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4700587	4701043	4755838		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000985653.1|4700587_4701043_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	50.0	3.0e-34
>prophage 340
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4707117	4709691	4755838		Enterobacteria_phage(100.0%)	1	NA	NA
WP_001235092.1|4707117_4709691_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
>prophage 341
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4716476	4719718	4755838		Escherichia_coli_O157_typing_phage(50.0%)	3	NA	NA
WP_001168062.1|4716476_4717547_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212380.1|4717986_4718505_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030985.1|4718497_4719718_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
>prophage 342
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4731424	4731907	4755838		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001518569.1|4731424_4731907_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
>prophage 343
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4745465	4750629	4755838	integrase	Organic_Lake_phycodnavirus(50.0%)	3	4744985:4744997	4751340:4751352
4744985:4744997	attL	ATCTTAATGATAA	NA	NA	NA	NA
WP_000196147.1|4745465_4747646_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	9.9e-19
WP_000342601.1|4747653_4748817_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000124716.1|4749435_4750629_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B5FPC6	Escherichia_phage	49.6	2.6e-106
4751340:4751352	attR	ATCTTAATGATAA	NA	NA	NA	NA
>prophage 344
NZ_CP009561	Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 chromosome, complete genome	4755838	4753718	4755281	4755838		Enterobacteria_phage(100.0%)	3	NA	NA
WP_000210079.1|4753718_4754285_-	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	62.2	3.8e-55
WP_000984206.1|4754301_4754547_-	transcriptional regulator	NA	Q7M294	Enterobacteria_phage	76.5	4.8e-31
WP_000194694.1|4754543_4755281_-	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	65.3	3.1e-81
