The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_018289	Mycolicibacterium smegmatis MC2 155, complete sequence	6988208	433839	442298	6988208		Shahe_endorna-like_virus(28.57%)	7	NA	NA
WP_011726901.1|433839_434706_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	58.0	7.3e-90
WP_014876757.1|435212_436481_+	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	37.3	4.3e-06
WP_014876758.1|436598_437672_+	SDR family NAD(P)-dependent oxidoreductase	NA	A0A0E3IB24	Synechococcus_phage	26.9	2.3e-21
WP_011726904.1|437920_438655_+	class I SAM-dependent methyltransferase	NA	A0A0B4ZZS0	Mycobacterium_phage	32.3	1.8e-12
WP_014876760.1|438906_439707_+	class I SAM-dependent methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	53.3	1.4e-58
WP_011726906.1|439740_441009_+	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	37.1	7.3e-06
WP_042510611.1|441185_442298_+	acyltransferase	NA	A9YX16	Burkholderia_phage	29.5	4.9e-22
>prophage 2
NC_018289	Mycolicibacterium smegmatis MC2 155, complete sequence	6988208	2215130	2222697	6988208	tail	Mycobacterium_phage(50.0%)	7	NA	NA
WP_011728185.1|2215130_2216339_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	25.0	1.3e-07
WP_003893512.1|2216397_2216649_+	hypothetical protein	NA	A0A0A7S2B5	Mycobacterium_phage	89.6	9.0e-33
WP_011728186.1|2216663_2217362_+	hypothetical protein	NA	A0A0A7RXU2	Mycobacterium_phage	93.5	3.6e-124
WP_011728187.1|2217372_2217813_-	SecB-like chaperone SecBL	NA	A0A160DCY1	Gordonia_phage	38.8	6.4e-18
WP_003893515.1|2217809_2218406_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_029104517.1|2218738_2219038_+	hypothetical protein	NA	A0A0A7RVJ2	Mycobacterium_phage	89.9	1.2e-44
WP_011728188.1|2219052_2222697_+|tail	phage tail tape measure protein	tail	Q854Y3	Mycobacterium_virus	92.5	0.0e+00
>prophage 3
NC_018289	Mycolicibacterium smegmatis MC2 155, complete sequence	6988208	4186314	4241071	6988208	integrase,transposase	Shigella_phage(12.5%)	48	4180420:4180436	4244158:4244174
4180420:4180436	attL	GCCCGGTCAGTGCCAGC	NA	NA	NA	NA
WP_085976167.1|4186314_4187480_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	36.4	4.2e-32
WP_011729554.1|4187558_4188245_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_011729555.1|4188254_4189694_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA	NA
WP_014877938.1|4189712_4191254_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_011729557.1|4191391_4192234_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011729558.1|4192286_4193417_-	CoA transferase	NA	NA	NA	NA	NA
WP_011729559.1|4193413_4195081_-	cyclohexanecarboxylate-CoA ligase	NA	Q75ZG1	Hepacivirus	25.0	1.1e-28
WP_011729560.1|4195083_4196139_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011729561.1|4196135_4196912_-	naphthoate synthase	NA	NA	NA	NA	NA
WP_011729562.1|4196913_4197795_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_011729563.1|4197804_4198695_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011729564.1|4198714_4199479_-	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA	NA
WP_011729565.1|4199475_4200699_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011729566.1|4200695_4201484_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_042510654.1|4201480_4202659_-	CoA transferase	NA	NA	NA	NA	NA
WP_011729568.1|4202969_4203710_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011729569.1|4203858_4205220_-	MHS family MFS transporter	NA	Q6JIH2	Burkholderia_virus	31.3	8.0e-43
WP_011729570.1|4205581_4206481_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014877941.1|4206477_4207770_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_011729572.1|4207821_4208604_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014877942.1|4208768_4209527_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_011729574.1|4209749_4211153_-|transposase	IS1380-like element ISMsm12 family transposase	transposase	NA	NA	NA	NA
WP_011729575.1|4211188_4212025_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011729576.1|4212123_4212714_+	TetR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011729578.1|4212869_4213721_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_011729580.1|4217179_4217731_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
WP_011729581.1|4217768_4218353_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_011729582.1|4218352_4218571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014877947.1|4218952_4219930_+	aliphatic nitrilase	NA	NA	NA	NA	NA
WP_080590936.1|4220310_4221294_+	MFS transporter	NA	NA	NA	NA	NA
WP_011729584.1|4221319_4222753_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_011729585.1|4222948_4223836_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011729586.1|4224006_4224633_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011729587.1|4224768_4225062_+	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_011729588.1|4225105_4226044_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011729589.1|4226348_4226912_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011729590.1|4227274_4228252_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_011729591.1|4228306_4229581_+	MFS transporter	NA	NA	NA	NA	NA
WP_162139608.1|4229700_4230528_-	alpha/beta hydrolase fold domain-containing protein	NA	M1PGN2	Moumouvirus	28.5	4.6e-25
WP_011729593.1|4230802_4231738_+	acetaldehyde dehydrogenase (acetylating)	NA	G9E526	Ostreococcus_lucimarinus_virus	31.8	1.8e-33
WP_011729594.1|4231734_4232775_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	32.8	1.2e-43
WP_011729595.1|4232783_4233035_-	ferredoxin	NA	NA	NA	NA	NA
WP_011729596.1|4233031_4233985_-	oxidoreductase	NA	NA	NA	NA	NA
WP_011729597.1|4233987_4234446_-	cytochrome P450	NA	NA	NA	NA	NA
WP_014877954.1|4235638_4236748_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011729600.1|4236744_4238970_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	26.0	1.2e-08
WP_011729601.1|4238959_4239388_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011727856.1|4239751_4241071_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	100.0	2.8e-250
4244158:4244174	attR	GCCCGGTCAGTGCCAGC	NA	NA	NA	NA
>prophage 4
NC_018289	Mycolicibacterium smegmatis MC2 155, complete sequence	6988208	6168055	6236001	6988208	tRNA,transposase,protease	Mycobacterium_phage(33.33%)	56	NA	NA
WP_003897506.1|6168055_6170368_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQU5	Bathycoccus_sp._RCC1105_virus	44.9	7.1e-108
WP_011731041.1|6170564_6171536_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014878559.1|6171532_6172723_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011731043.1|6172722_6173739_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003897510.1|6173760_6174492_+	SIMPL domain-containing protein	NA	NA	NA	NA	NA
WP_003897511.1|6174496_6175051_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	29.1	3.1e-09
WP_011731045.1|6175128_6176097_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_175048376.1|6176075_6177158_-|protease	zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_029104179.1|6177145_6178528_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_011731048.1|6178671_6179160_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	45.3	5.1e-32
WP_003897516.1|6179220_6179751_+	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA	NA
WP_011731049.1|6179726_6180731_-	2-hydroxyacid dehydrogenase	NA	M1I539	Acanthocystis_turfacea_Chlorella_virus	26.1	3.2e-12
WP_011731050.1|6180736_6182086_-	glucarate dehydratase	NA	NA	NA	NA	NA
WP_011731051.1|6182111_6182912_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011731052.1|6182913_6183636_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_011731053.1|6183632_6184631_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	30.0	2.5e-17
WP_011731054.1|6184623_6185655_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	1.7e-13
WP_003897523.1|6185651_6186638_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011731055.1|6186646_6187576_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011731056.1|6187603_6189166_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011731057.1|6189459_6190473_+	2-hydroxyacid dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	31.9	6.9e-15
WP_003897528.1|6190466_6191396_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011731058.1|6191652_6192012_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_011731059.1|6192045_6192492_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_011731060.1|6192477_6192924_-	response regulator	NA	NA	NA	NA	NA
WP_011731061.1|6192920_6194498_-	CHASE3 domain-containing protein	NA	A0A1V0SGX0	Hokovirus	27.8	1.1e-16
WP_011731062.1|6194494_6195703_-	SpoIIE family protein phosphatase	NA	NA	NA	NA	NA
WP_011731063.1|6195933_6197205_-	glucarate dehydratase	NA	NA	NA	NA	NA
WP_011731064.1|6197215_6198139_-	5-dehydro-4-deoxyglucarate dehydratase	NA	NA	NA	NA	NA
WP_011731065.1|6198169_6199768_-	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA	NA
WP_011731066.1|6199910_6200315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003897538.1|6200416_6201385_-	TerC family protein	NA	A0A291LBC5	Escherichia_phage	33.7	4.4e-35
WP_011731067.1|6201613_6205549_+	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	24.1	3.3e-36
WP_011731068.1|6205545_6206883_+	M1 family metallopeptidase	NA	NA	NA	NA	NA
WP_011731069.1|6206879_6208160_+	membrane protein	NA	NA	NA	NA	NA
WP_011731070.1|6208149_6208743_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011731071.1|6208744_6210526_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_029104180.1|6210587_6211529_-	UDP-glucose 4-epimerase	NA	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	34.6	3.9e-36
WP_011731073.1|6211585_6213349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011731074.1|6213350_6214802_-	PE-PPE domain-containing protein	NA	A0A222ZKN7	Mycobacterium_phage	53.3	7.7e-76
WP_011731075.1|6215113_6215830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011726768.1|6215910_6217317_+|transposase	IS1380-like element ISMsm3 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	43.9	5.1e-85
WP_162139567.1|6217410_6218583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011726739.1|6218669_6219992_+|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
WP_011726740.1|6219999_6220701_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	99.6	2.0e-138
WP_014878573.1|6221275_6221641_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_011731077.1|6221637_6222513_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011731078.1|6222735_6223944_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_011731079.1|6224025_6225717_+	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	31.7	2.5e-17
WP_011726739.1|6225774_6227097_+|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
WP_011726740.1|6227104_6227806_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	99.6	2.0e-138
WP_011731080.1|6227968_6230779_-	type I DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	31.3	1.4e-97
WP_003897557.1|6230882_6231476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562175.1|6231571_6231775_-	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	56.2	1.5e-14
WP_003897559.1|6232076_6234407_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_011726739.1|6234678_6236001_+|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
