The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	295993	344646	2015626	transposase,bacteriocin,protease,tRNA	Brevibacillus_phage(22.22%)	51	NA	NA
WP_002262126.1|295993_296893_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_014677752.1|297029_299642_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002265123.1|299643_300351_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.1	1.8e-30
WP_014677753.1|300458_301034_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014677754.1|301026_301563_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_002262121.1|301916_302609_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.9	5.9e-26
WP_002262120.1|302977_303469_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_002276047.1|303455_304625_+	DnaD domain protein	NA	NA	NA	NA	NA
WP_002265451.1|304625_305525_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	31.2	4.1e-27
WP_002292004.1|305537_306848_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_014677755.1|306922_307549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002292006.1|307596_308235_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_002262114.1|308706_309459_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002292008.1|309455_310781_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_002270250.1|310922_311063_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002265368.1|311329_311560_+|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002310604.1|311690_312092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002263912.1|314037_314442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002265308.1|315216_315381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002264173.1|315785_315998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002270918.1|316161_316350_+|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002299839.1|316834_317863_+	thiol reductase thioredoxin	NA	NA	NA	NA	NA
WP_162137384.1|318050_318212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002270929.1|318658_318853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044560220.1|318880_319273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044560222.1|319618_319810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002270889.1|319859_320021_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_002270890.1|320414_320573_+	glycerol kinase	NA	NA	NA	NA	NA
WP_002270937.1|321049_321241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044560226.1|321822_323106_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.1	4.7e-93
WP_014677762.1|323629_324703_+	acyltransferase	NA	NA	NA	NA	NA
WP_002263350.1|324939_325308_-	DUF956 family protein	NA	NA	NA	NA	NA
WP_002268242.1|325646_326573_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_014677763.1|326587_327406_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
WP_002265466.1|327440_328433_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_002263356.1|329309_329780_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002271845.1|329878_332242_-	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	28.1	3.4e-65
WP_002263358.1|332327_332915_-	signal peptidase I	NA	NA	NA	NA	NA
WP_002280675.1|332934_333846_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_002263360.1|334041_334347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002263361.1|334343_334889_+	CvpA family protein	NA	NA	NA	NA	NA
WP_014677765.1|334956_337287_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	52.6	3.2e-23
WP_002263363.1|337361_337676_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	46.2	1.1e-16
WP_002267521.1|337773_338823_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_014677766.1|339014_340160_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_002269894.1|341229_341400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002263367.1|341704_341950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002261866.1|342105_342396_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_002261867.1|342413_342908_+	single-stranded DNA-binding protein	NA	A0A286QNX2	Streptococcus_phage	70.5	1.8e-56
WP_000068664.1|342937_343177_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_014677767.1|343443_344646_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	86.2	9.8e-194
>prophage 2
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	510019	523862	2015626		Streptococcus_phage(84.62%)	18	NA	NA
WP_002262678.1|510019_510784_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.6e-16
WP_002262679.1|510783_511494_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.9	7.2e-19
WP_002264029.1|511609_512269_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	60.6	8.6e-67
WP_002262681.1|512344_512983_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	65.6	3.4e-76
WP_014677829.1|512995_513871_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	54.5	7.6e-79
WP_002264026.1|513867_514674_+	signal peptidase II	NA	NA	NA	NA	NA
WP_002262684.1|514666_514999_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	58.2	6.1e-29
WP_002264025.1|515004_515871_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	73.9	1.7e-115
WP_014677830.1|516175_517411_+	ammonium transporter	NA	NA	NA	NA	NA
WP_002264023.1|517426_517768_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_014677831.1|517987_519079_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	79.0	2.6e-169
WP_002270504.1|519196_519337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014677832.1|519487_520042_+	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	63.9	9.5e-51
WP_002262691.1|520127_521309_+	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	79.6	7.9e-180
WP_014677833.1|521397_521892_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.4	8.2e-46
WP_002272344.1|521928_522282_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	67.0	2.1e-40
WP_002268056.1|522346_522970_+	endonuclease III	NA	NA	NA	NA	NA
WP_044560782.1|523034_523862_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	76.9	2.1e-123
>prophage 3
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	1007100	1015884	2015626		Bacillus_phage(50.0%)	7	NA	NA
WP_014677992.1|1007100_1007691_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	33.2	1.1e-15
WP_002264269.1|1007700_1008963_+	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	52.3	4.3e-99
WP_014677993.1|1008959_1009937_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002286819.1|1009938_1010553_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	37.6	1.6e-22
WP_014677994.1|1010562_1012296_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.0	1.1e-39
WP_014677995.1|1012292_1014038_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.2	5.8e-54
WP_002264266.1|1014168_1015884_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	82.5	7.5e-272
>prophage 4
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	1051988	1057721	2015626	integrase	Streptococcus_phage(83.33%)	7	1043155:1043169	1061916:1061930
1043155:1043169	attL	AAAAAGACAAAATTG	NA	NA	NA	NA
WP_014678006.1|1051988_1052900_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	46.2	1.6e-42
WP_002265016.1|1053120_1054191_+	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_002276369.1|1054591_1055809_-|integrase	site-specific integrase	integrase	A0A1S5SEW7	Streptococcus_phage	78.8	6.2e-188
WP_002262306.1|1055889_1056093_-	excisionase family DNA-binding protein	NA	A0A1S5SF07	Streptococcus_phage	89.6	1.8e-28
WP_002271367.1|1056553_1056784_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	88.2	6.9e-32
WP_014678007.1|1056780_1057203_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	84.3	3.4e-61
WP_080007638.1|1057532_1057721_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	64.2	6.3e-15
1061916:1061930	attR	CAATTTTGTCTTTTT	NA	NA	NA	NA
>prophage 5
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	1158630	1165480	2015626		Bacillus_phage(50.0%)	7	NA	NA
WP_014678041.1|1158630_1160385_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.6	6.1e-43
WP_002283869.1|1160374_1162177_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	1.3e-32
WP_002263292.1|1162180_1162615_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014678042.1|1163166_1163820_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	51.9	1.0e-59
WP_002266457.1|1163819_1164266_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	60.6	3.8e-42
WP_002263289.1|1164262_1164979_+	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	48.4	4.8e-63
WP_014678043.1|1164991_1165480_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	57.2	1.1e-45
>prophage 6
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	1941671	1970206	2015626	holin,transposase,integrase,tRNA	Orpheovirus(14.29%)	29	1947216:1947231	1966725:1966740
WP_014678298.1|1941671_1943363_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	33.7	4.3e-78
WP_002264212.1|1943410_1944289_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	36.6	1.6e-47
WP_002264213.1|1944319_1945258_-	YitT family protein	NA	NA	NA	NA	NA
WP_014678299.1|1945244_1947014_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	26.7	6.8e-18
1947216:1947231	attL	TTTTAAGGTTAAGCAG	NA	NA	NA	NA
WP_002283554.1|1947238_1948528_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_014678300.1|1948820_1950665_+	APC family permease	NA	NA	NA	NA	NA
WP_002262412.1|1950990_1951140_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002265642.1|1951415_1951673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014678302.1|1951695_1951965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002284511.1|1951990_1953088_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA	NA
WP_014678303.1|1953182_1954544_+	multidrug efflux MFS transporter MdeA	NA	NA	NA	NA	NA
WP_002291812.1|1954937_1955066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014678304.1|1955397_1958031_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002284508.1|1958043_1958745_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	9.2e-35
WP_002284507.1|1958759_1960091_-	multidrug transporter MatE	NA	NA	NA	NA	NA
WP_002286967.1|1960083_1960848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002270840.1|1961069_1961651_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_115174147.1|1961878_1961989_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_148270967.1|1962420_1963323_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	64.7	1.5e-42
WP_158309826.1|1963680_1963839_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_002270353.1|1964046_1964295_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_002270354.1|1964346_1964475_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_002270355.1|1964681_1965983_-	glycosyltransferase family 2 protein	NA	S5WBE2	Pseudomonas_phage	27.2	8.9e-07
WP_002270356.1|1965985_1966285_-	DUF3884 family protein	NA	NA	NA	NA	NA
WP_002270357.1|1966310_1966493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300850.1|1966780_1967329_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
1966725:1966740	attR	TTTTAAGGTTAAGCAG	NA	NA	NA	NA
WP_002262420.1|1967394_1967769_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014678308.1|1967847_1968603_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002262422.1|1969054_1970206_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	F2Y1V5	Organic_Lake_phycodnavirus	30.2	5.1e-14
>prophage 7
NC_017768	Streptococcus mutans LJ23, complete genome	2015626	1993232	2004833	2015626		Staphylococcus_phage(25.0%)	12	NA	NA
WP_002262446.1|1993232_1993838_-	transglycosylase SLT domain-containing protein	NA	Q4Z8Z7	Staphylococcus_phage	62.2	5.5e-28
WP_002262447.1|1993999_1994866_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	75.7	1.3e-22
WP_002262448.1|1995054_1995849_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002262449.1|1995841_1996684_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	26.6	9.1e-13
WP_002267083.1|1996659_1997502_-	energy-coupling factor transporter ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	30.6	3.0e-16
WP_002262451.1|1997505_1998048_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_002270375.1|1998059_1999037_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014678314.1|1999109_2000402_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	26.3	8.0e-08
WP_002266407.1|2000403_2001651_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	45.4	2.5e-99
WP_002262455.1|2001729_2002095_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	3.1e-18
WP_014678315.1|2002097_2003189_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_002262457.1|2003351_2004833_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	2.6e-95
