assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	1	135607-135720	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	TGGTGGGTGCCGACCGTTGGTCGGCAC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA,NA|169aa|down_0|NC_017671.1_135862_136369_+,NA|126aa|down_1|NC_017671.1_136932_137310_+,NA|156aa|down_2|NC_017671.1_137306_137774_+	NA|145aa|up_9|NC_017671.1_124297_124732_+	PRK10293, PRK10293, 1,4-dihydroxy-2-naphthoyl-CoA hydrolase	NA|264aa|up_8|NC_017671.1_124850_125642_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|330aa|up_7|NC_017671.1_125694_126684_+	COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|204aa|up_6|NC_017671.1_128821_129433_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|178aa|up_5|NC_017671.1_129534_130068_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|276aa|up_4|NC_017671.1_130147_130975_-	pfam14302, DUF4377, Domain of unknown function (DUF4377)	NA|265aa|up_3|NC_017671.1_131048_131843_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|470aa|up_2|NC_017671.1_132065_133475_+	PRK09469, glnA, glutamate--ammonia ligase	NA|113aa|up_1|NC_017671.1_133796_134135_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|477aa|up_0|NC_017671.1_134157_135588_+	PRK10666, PRK10666, ammonium transporter AmtB	NA|169aa|down_0|NC_017671.1_135862_136369_+	NA	NA|126aa|down_1|NC_017671.1_136932_137310_+	NA	NA|156aa|down_2|NC_017671.1_137306_137774_+	NA	NA|249aa|down_3|NC_017671.1_138236_138983_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|264aa|down_4|NC_017671.1_139870_140662_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|500aa|down_5|NC_017671.1_140648_142148_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|354aa|down_6|NC_017671.1_143182_144244_+	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|483aa|down_7|NC_017671.1_144236_145685_+	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|190aa|down_8|NC_017671.1_145778_146348_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)	NA|209aa|down_9|NC_017671.1_146380_147007_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	2	408819-409113	1	CRT	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	CCGCCGTTGACGGTNTCGA	19	0	0	NA	NA	NA	5	5	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA|31aa|up_9|NC_017671.1_386483_386576_-,NA|221aa|up_8|NC_017671.1_386797_387460_-,NA|77aa|up_4|NC_017671.1_390480_390711_+,NA	NA|31aa|up_9|NC_017671.1_386483_386576_-	NA	NA|221aa|up_8|NC_017671.1_386797_387460_-	NA	NA|220aa|up_7|NC_017671.1_387478_388138_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|267aa|up_6|NC_017671.1_388300_389101_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|435aa|up_5|NC_017671.1_389097_390402_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|77aa|up_4|NC_017671.1_390480_390711_+	NA	NA|376aa|up_3|NC_017671.1_390832_391960_-	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|491aa|up_2|NC_017671.1_392026_393499_-	PRK11649, PRK11649, putative peptidase; Provisional	NA|404aa|up_1|NC_017671.1_393666_394878_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|570aa|up_0|NC_017671.1_406781_408491_-	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|434aa|down_0|NC_017671.1_409335_410637_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|495aa|down_1|NC_017671.1_410745_412230_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|231aa|down_2|NC_017671.1_412313_413006_-	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|476aa|down_3|NC_017671.1_413231_414659_+	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|200aa|down_4|NC_017671.1_414772_415372_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|358aa|down_5|NC_017671.1_415358_416432_+	TIGR01526, nadR_NMN_Atrans, nicotinamide-nucleotide adenylyltransferase, NadR type	NA|1073aa|down_6|NC_017671.1_416616_419835_-	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA|159aa|down_7|NC_017671.1_420109_420586_+	pfam10003, DUF2244, Integral membrane protein (DUF2244)	NA|318aa|down_8|NC_017671.1_420597_421551_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|536aa|down_9|NC_017671.1_421610_423218_+	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	3	698162-698247	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	GTGCCGGCCGCTGGCCGGCATCGTGCCCCG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA|122aa|up_9|NC_017671.1_682614_682980_-,NA|140aa|down_4|NC_017671.1_703587_704007_+,NA|150aa|down_5|NC_017671.1_704034_704484_+,NA|143aa|down_8|NC_017671.1_706400_706829_-,NA|295aa|down_9|NC_017671.1_706924_707809_-	NA|122aa|up_9|NC_017671.1_682614_682980_-	NA	NA|180aa|up_8|NC_017671.1_683439_683979_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|243aa|up_7|NC_017671.1_684064_684793_+	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|855aa|up_6|NC_017671.1_684885_687450_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|346aa|up_5|NC_017671.1_687440_688478_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|392aa|up_4|NC_017671.1_688744_689920_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|734aa|up_3|NC_017671.1_689924_692126_+	pfam03170, BcsB, Bacterial cellulose synthase subunit	NA|716aa|up_2|NC_017671.1_692132_694280_+	PRK15489, nfrB, glycosyl transferase family protein	NA|945aa|up_1|NC_017671.1_694276_697111_+	pfam13283, NfrA_C, Bacteriophage N adsorption protein A C-term	NA|322aa|up_0|NC_017671.1_697104_698070_-	pfam14488, DUF4434, Domain of unknown function (DUF4434)	NA|439aa|down_0|NC_017671.1_698248_699565_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|555aa|down_1|NC_017671.1_699657_701322_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|148aa|down_2|NC_017671.1_701576_702020_+	pfam11776, RcnB, Nickel/cobalt transporter regulator	NA|418aa|down_3|NC_017671.1_702208_703462_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|140aa|down_4|NC_017671.1_703587_704007_+	NA	NA|150aa|down_5|NC_017671.1_704034_704484_+	NA	NA|174aa|down_6|NC_017671.1_704636_705158_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|362aa|down_7|NC_017671.1_705278_706364_+	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|143aa|down_8|NC_017671.1_706400_706829_-	NA	NA|295aa|down_9|NC_017671.1_706924_707809_-	NA
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	4	1885942-1886035	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	GTGCCAACCAAGGTTGGCACCTACCG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA|169aa|up_5|NC_017671.1_1881177_1881684_-,NA	NA|307aa|up_9|NC_017671.1_1876702_1877623_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|309aa|up_8|NC_017671.1_1878641_1879568_-	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|270aa|up_7|NC_017671.1_1879564_1880374_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|223aa|up_6|NC_017671.1_1880496_1881165_-	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|169aa|up_5|NC_017671.1_1881177_1881684_-	NA	NA|467aa|up_4|NC_017671.1_1881680_1883081_-	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|160aa|up_3|NC_017671.1_1883165_1883645_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|187aa|up_2|NC_017671.1_1883736_1884297_-	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|298aa|up_1|NC_017671.1_1884460_1885354_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|172aa|up_0|NC_017671.1_1885386_1885902_+	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]	NA|108aa|down_0|NC_017671.1_1886089_1886413_-	pfam11953, DUF3470, Domain of unknown function (DUF3470)	NA|475aa|down_1|NC_017671.1_1886593_1888018_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|460aa|down_2|NC_017671.1_1888573_1889953_+	PRK11623, pcnB, poly(A) polymerase I; Provisional	NA|162aa|down_3|NC_017671.1_1889956_1890442_+	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|272aa|down_4|NC_017671.1_1890476_1891292_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|280aa|down_5|NC_017671.1_1891288_1892128_+	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|127aa|down_6|NC_017671.1_1892289_1892670_+	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional	NA|505aa|down_7|NC_017671.1_1892666_1894181_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|190aa|down_8|NC_017671.1_1894305_1894875_-	COG4567, COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]	NA|409aa|down_9|NC_017671.1_1894871_1896098_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	5	1917846-1917948	4	CRISPRCasFinder	no	csa3	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Type I-A	GGTGGGTGCCAACCTTGGTTGGCAC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA|150aa|up_7|NC_017671.1_1911534_1911984_+,NA|150aa|up_4|NC_017671.1_1914062_1914512_+,NA|164aa|down_3|NC_017671.1_1921818_1922310_+	NA|262aa|up_9|NC_017671.1_1910474_1911260_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|83aa|up_8|NC_017671.1_1911335_1911584_+	COG2938, COG2938, Uncharacterized conserved protein [Function unknown]	NA|150aa|up_7|NC_017671.1_1911534_1911984_+	NA	NA|414aa|up_6|NC_017671.1_1912007_1913249_+	TIGR02212, releasing_system_transmembrane_protein_lolC	NA|238aa|up_5|NC_017671.1_1913241_1913955_+	TIGR02211, LolD_lipo_ex, lipoprotein releasing system, ATP-binding protein	NA|150aa|up_4|NC_017671.1_1914062_1914512_+	NA	NA|90aa|up_3|NC_017671.1_1914586_1914856_-	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|375aa|up_2|NC_017671.1_1914861_1915986_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|439aa|up_1|NC_017671.1_1916068_1917385_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|100aa|up_0|NC_017671.1_1917514_1917814_+	PRK07191, flgK, flagellar hook-associated protein FlgK; Validated	NA|631aa|down_0|NC_017671.1_1918030_1919923_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|193aa|down_1|NC_017671.1_1920643_1921222_+	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair]	NA|170aa|down_2|NC_017671.1_1921248_1921758_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|164aa|down_3|NC_017671.1_1921818_1922310_+	NA	NA|94aa|down_4|NC_017671.1_1922442_1922724_+	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion]	NA|577aa|down_5|NC_017671.1_1922720_1924451_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|296aa|down_6|NC_017671.1_1924571_1925459_+	cd16281, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|98aa|down_7|NC_017671.1_1925544_1925838_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	csa3|120aa|down_8|NC_017671.1_1925961_1926321_+	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|160aa|down_9|NC_017671.1_1926301_1926781_+	cd08896, SRPBCC_CalC_Aha1-like_3, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	6	3725512-3725623	5	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	TTGGGTGGGTGCGGACCGTTGGTCCGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA|172aa|up_8|NC_017671.1_3712131_3712647_-,NA	NA|267aa|up_9|NC_017671.1_3711291_3712092_+	pfam06629, MipA, MltA-interacting protein MipA	NA|172aa|up_8|NC_017671.1_3712131_3712647_-	NA	NA|862aa|up_7|NC_017671.1_3712770_3715356_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|274aa|up_6|NC_017671.1_3715537_3716359_-	pfam11219, DUF3014, Protein of unknown function (DUF3014)	NA|237aa|up_5|NC_017671.1_3716530_3717241_+	pfam14497, GST_C_3, Glutathione S-transferase, C-terminal domain	NA|537aa|up_4|NC_017671.1_3717406_3719017_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|573aa|up_3|NC_017671.1_3719651_3721370_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|286aa|up_2|NC_017671.1_3721478_3722336_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|161aa|up_1|NC_017671.1_3722372_3722855_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|812aa|up_0|NC_017671.1_3723070_3725506_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|253aa|down_0|NC_017671.1_3725742_3726501_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|594aa|down_1|NC_017671.1_3726542_3728324_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|455aa|down_2|NC_017671.1_3728320_3729685_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]	NA|146aa|down_3|NC_017671.1_3729755_3730193_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|169aa|down_4|NC_017671.1_3730167_3730674_-	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|257aa|down_5|NC_017671.1_3730694_3731465_-	PRK10723, PRK10723, polyphenol oxidase	NA|330aa|down_6|NC_017671.1_3731464_3732454_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|296aa|down_7|NC_017671.1_3732567_3733455_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|401aa|down_8|NC_017671.1_3733654_3734857_+	pfam03583, LIP, Secretory lipase	NA|545aa|down_9|NC_017671.1_3734999_3736634_-	PRK13981, PRK13981, NAD synthetase; Provisional
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	7	3734890-3734985	6	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	GTTGCCGGCCAGCGGCCGGCACTACC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA,NA	NA|812aa|up_9|NC_017671.1_3723070_3725506_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|253aa|up_8|NC_017671.1_3725742_3726501_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|594aa|up_7|NC_017671.1_3726542_3728324_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|455aa|up_6|NC_017671.1_3728320_3729685_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]	NA|146aa|up_5|NC_017671.1_3729755_3730193_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|169aa|up_4|NC_017671.1_3730167_3730674_-	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|257aa|up_3|NC_017671.1_3730694_3731465_-	PRK10723, PRK10723, polyphenol oxidase	NA|330aa|up_2|NC_017671.1_3731464_3732454_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|296aa|up_1|NC_017671.1_3732567_3733455_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|401aa|up_0|NC_017671.1_3733654_3734857_+	pfam03583, LIP, Secretory lipase	NA|545aa|down_0|NC_017671.1_3734999_3736634_-	PRK13981, PRK13981, NAD synthetase; Provisional	NA|292aa|down_1|NC_017671.1_3736815_3737691_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|390aa|down_2|NC_017671.1_3737711_3738881_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|538aa|down_3|NC_017671.1_3739286_3740900_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|458aa|down_4|NC_017671.1_3740960_3742334_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|577aa|down_5|NC_017671.1_3742446_3744177_-	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB	NA|136aa|down_6|NC_017671.1_3744401_3744809_-	COG4969, PilA, Tfp pilus assembly protein, major pilin PilA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|140aa|down_7|NC_017671.1_3744925_3745345_-	COG4969, PilA, Tfp pilus assembly protein, major pilin PilA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|420aa|down_8|NC_017671.1_3745701_3746961_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|288aa|down_9|NC_017671.1_3746968_3747832_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
GCF_000284595.1_ASM28459v1	NC_017671	Stenotrophomonas maltophilia D457, complete genome	8	4444410-4444512	7	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	Orphan	GTGTGCCAACCAAGGTTGGCACCT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,PD-DExK,Cas9_archaeal,DinG	NA|204aa|up_9|NC_017671.1_4433291_4433903_-,NA|110aa|up_8|NC_017671.1_4434171_4434501_-,NA|119aa|up_6|NC_017671.1_4435974_4436331_+,NA|177aa|up_5|NC_017671.1_4436379_4436910_+,NA|130aa|up_1|NC_017671.1_4441223_4441613_-,NA|143aa|down_4|NC_017671.1_4448163_4448592_-,NA|193aa|down_6|NC_017671.1_4450589_4451168_+	NA|204aa|up_9|NC_017671.1_4433291_4433903_-	NA	NA|110aa|up_8|NC_017671.1_4434171_4434501_-	NA	NA|201aa|up_7|NC_017671.1_4434741_4435344_-	pfam06197, DUF998, Protein of unknown function (DUF998)	NA|119aa|up_6|NC_017671.1_4435974_4436331_+	NA	NA|177aa|up_5|NC_017671.1_4436379_4436910_+	NA	NA|345aa|up_4|NC_017671.1_4437683_4438718_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|502aa|up_3|NC_017671.1_4439164_4440670_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|145aa|up_2|NC_017671.1_4440695_4441130_-	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|130aa|up_1|NC_017671.1_4441223_4441613_-	NA	NA|773aa|up_0|NC_017671.1_4441790_4444109_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|278aa|down_0|NC_017671.1_4444534_4445368_-	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional	NA|221aa|down_1|NC_017671.1_4445517_4446180_+	pfam06055, ExoD, Exopolysaccharide synthesis, ExoD	NA|437aa|down_2|NC_017671.1_4446311_4447622_-	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|147aa|down_3|NC_017671.1_4447614_4448055_-	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|143aa|down_4|NC_017671.1_4448163_4448592_-	NA	NA|589aa|down_5|NC_017671.1_4448823_4450590_+	cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases	NA|193aa|down_6|NC_017671.1_4450589_4451168_+	NA	NA|227aa|down_7|NC_017671.1_4451427_4452108_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|111aa|down_8|NC_017671.1_4452119_4452452_-	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV	NA|212aa|down_9|NC_017671.1_4452453_4453089_-	PRK10663, PRK10663, cytochrome o ubiquinol oxidase subunit III; Provisional
