The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_018610	Lactobacillus buchneri subsp. silagei CD034, complete sequence	2500564	939913	951453	2500564	terminase	Lactobacillus_phage(36.36%)	23	NA	NA
WP_014939753.1|939913_940429_+	host-nuclease inhibitor Gam family protein	NA	A0A0A7S0G6	Clostridium_phage	33.5	2.1e-12
WP_014939754.1|940415_941132_+	ERF family protein	NA	A0A2H4J439	uncultured_Caudovirales_phage	60.0	1.7e-36
WP_014939755.1|941162_942095_+	hypothetical protein	NA	A0A218KCJ2	Bacillus_phage	44.8	3.5e-21
WP_014939756.1|942084_943359_+	helicase DnaB	NA	A8YQM1	Lactobacillus_phage	36.8	7.0e-57
WP_014939757.1|943342_943729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044502628.1|943743_944148_+	single-stranded DNA-binding protein	NA	D6PSU2	Lactobacillus_phage	43.0	2.5e-24
WP_014939759.1|944161_944809_+	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	46.4	9.1e-53
WP_044502629.1|945071_945527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044502630.1|945527_945716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014939762.1|945728_945923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014939763.1|945906_946266_+	hypothetical protein	NA	A0A2I7RY34	Vibrio_phage	42.5	9.2e-15
WP_014939764.1|946255_946567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014939765.1|946563_946779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158512404.1|946775_946949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014939766.1|946953_947163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044502631.1|947168_947399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014939767.1|947400_947679_+	hypothetical protein	NA	A0A0A8WEQ1	Clostridium_phage	56.0	5.1e-21
WP_044502632.1|947680_947890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044502736.1|947994_948462_+	transcriptional regulator	NA	D6PSV8	Lactobacillus_phage	50.7	3.6e-35
WP_014939769.1|948896_949061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014939770.1|949084_949297_-	CsbD family protein	NA	NA	NA	NA	NA
WP_014939771.1|949579_950128_+|terminase	terminase small subunit	terminase	A0A1J0MFZ9	Staphylococcus_phage	36.5	2.1e-10
WP_014939772.1|950133_951453_+|terminase	PBSX family phage terminase large subunit	terminase	D2IYW1	Enterococcus_phage	50.4	2.2e-114
>prophage 2
NC_018610	Lactobacillus buchneri subsp. silagei CD034, complete sequence	2500564	1171017	1179327	2500564	tRNA	Staphylococcus_phage(28.57%)	8	NA	NA
WP_013727856.1|1171017_1171293_+	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	67.4	2.0e-25
WP_014939937.1|1171360_1172614_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_014939938.1|1172737_1173628_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	39.1	9.9e-58
WP_044502645.1|1173758_1174970_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	48.8	4.2e-43
WP_014939940.1|1174977_1176894_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.3	1.6e-52
WP_172874416.1|1176926_1177883_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	63.1	5.2e-121
WP_014939942.1|1177893_1178379_+	dihydrofolate reductase	NA	F8SJN4	Pseudomonas_phage	39.0	6.4e-19
WP_014939943.1|1178478_1179327_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	36.7	1.9e-18
>prophage 3
NC_018610	Lactobacillus buchneri subsp. silagei CD034, complete sequence	2500564	1441266	1449149	2500564	protease	Streptococcus_phage(33.33%)	6	NA	NA
WP_013728123.1|1441266_1441860_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	53.3	2.0e-54
WP_013728124.1|1442029_1443106_+	zinc-dependent alcohol dehydrogenase family protein	NA	K7Z7U2	Megavirus	33.3	8.1e-30
WP_014940122.1|1443227_1444172_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	36.8	1.5e-48
WP_014940123.1|1444202_1445207_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	54.2	5.1e-95
WP_013728127.1|1445206_1446091_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	1.3e-09
WP_014940124.1|1446272_1449149_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	54.9	1.4e-307
>prophage 4
NC_018610	Lactobacillus buchneri subsp. silagei CD034, complete sequence	2500564	1514558	1612831	2500564	tRNA,capsid,portal,transposase,terminase,integrase,head,protease,tail	Lactobacillus_phage(45.95%)	90	1530788:1530804	1609285:1609301
WP_014940169.1|1514558_1515965_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.4	7.2e-55
WP_014940170.1|1516103_1517597_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_013728270.1|1517685_1518852_-	PIN/TRAM domain-containing protein	NA	NA	NA	NA	NA
WP_013728271.1|1518878_1520252_-	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_014940172.1|1520346_1520886_-	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	49.4	1.0e-41
WP_013728273.1|1521030_1521714_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_044502655.1|1521854_1523189_+	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	35.1	3.4e-70
WP_014940174.1|1523271_1523943_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_014940175.1|1524070_1525015_-	AEC family transporter	NA	NA	NA	NA	NA
WP_013728277.1|1525226_1526321_+	LCP family protein	NA	NA	NA	NA	NA
WP_014940176.1|1526419_1527271_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_014940177.1|1527287_1528091_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_014940178.1|1528109_1528613_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_014940179.1|1528612_1529038_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_014940180.1|1529116_1529734_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_014940181.1|1529978_1530857_-	homoserine kinase	NA	NA	NA	NA	NA
1530788:1530804	attL	ACCCAACCGAATCAACA	NA	NA	NA	NA
WP_014940182.1|1530871_1531339_-	SprT family protein	NA	NA	NA	NA	NA
WP_014940183.1|1531354_1533523_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_013728286.1|1533968_1534400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940185.1|1534421_1537085_-	calcium-translocating P-type ATPase, PMCA-type	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	28.3	6.8e-70
WP_014940186.1|1537275_1538103_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	55.1	2.5e-71
WP_013728289.1|1538124_1539582_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.3	2.1e-113
WP_014940187.1|1539702_1540458_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_014940188.1|1540454_1540817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014940189.1|1541126_1541831_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014940190.1|1541845_1542979_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_014940191.1|1542997_1543795_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	30.3	2.7e-22
WP_014940192.1|1544182_1545004_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_014940193.1|1545071_1546565_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	37.3	2.1e-76
WP_013728295.1|1546804_1547113_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_014940195.1|1547114_1547432_-	PTS lactose transporter subunit IIB	NA	NA	NA	NA	NA
WP_014940196.1|1547951_1548203_-	hemolysin XhlA family protein	NA	E9LUR9	Lactobacillus_phage	42.5	3.4e-08
WP_014940197.1|1548202_1549027_-	autolysin	NA	L0P6H6	Lactobacillus_phage	30.8	9.6e-15
WP_013728299.1|1549039_1549507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940198.1|1549900_1550077_-	XkdX family protein	NA	NA	NA	NA	NA
WP_014940199.1|1550094_1550505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008214398.1|1552360_1552501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940201.1|1552510_1553344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940202.1|1553340_1555923_-|tail	phage tail protein	tail	A0A2P0ZLF8	Lactobacillus_phage	30.7	1.1e-93
WP_014940203.1|1555972_1556722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940204.1|1556727_1557960_-|tail	phage tail family protein	tail	E9LUR2	Lactobacillus_phage	32.2	1.2e-48
WP_014940205.1|1557952_1563529_-|tail	phage tail tape measure protein	tail	Q9AZS0	Lactococcus_phage	35.3	1.0e-104
WP_013728306.1|1563737_1564115_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_013728307.1|1564173_1564860_-|tail	tail protein	tail	A0A0M7RF39	Lactobacillus_phage	42.4	8.2e-36
WP_044502656.1|1564860_1565250_-	DUF806 family protein	NA	A0A286QP65	Streptococcus_phage	31.6	1.7e-09
WP_013728309.1|1565249_1565648_-	HK97 gp10 family phage protein	NA	Q38219	Leuconostoc_phage	51.1	2.9e-17
WP_003636420.1|1565640_1566003_-|head	phage head closure protein	head	Q94MA7	Lactococcus_phage	36.3	9.6e-12
WP_039933407.1|1565992_1566259_-	DNA-packaging protein	NA	NA	NA	NA	NA
WP_013728311.1|1566346_1567588_-|capsid	phage major capsid protein	capsid	Q9T1F6	Lactobacillus_phage	44.7	7.0e-86
WP_013728312.1|1567591_1568293_-|protease	Clp protease ClpP	protease	Q9T1F7	Lactobacillus_phage	52.3	3.4e-53
WP_013728313.1|1568273_1569422_-|portal	phage portal protein	portal	A0A0M9JJ63	Lactobacillus_phage	44.9	1.3e-86
WP_008214368.1|1569435_1569600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940207.1|1569660_1571556_-|terminase	terminase large subunit	terminase	A0A0M7RDK9	Lactobacillus_phage	41.0	6.0e-137
WP_003636406.1|1571555_1572074_-|terminase	phage terminase small subunit P27 family	terminase	Q5K5J8	Oenococcus_phage	47.7	1.7e-25
WP_044502657.1|1572665_1573121_-	HNH endonuclease	NA	U5U440	Lactobacillus_phage	39.4	1.7e-05
WP_014940209.1|1573098_1573995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167537221.1|1574068_1574245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940210.1|1574338_1574752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039933389.1|1574753_1575068_-	VRR-NUC domain-containing protein	NA	A0A1B0YA93	Lactobacillus_phage	56.9	1.4e-30
WP_014940212.1|1575354_1577655_-	primase	NA	Q9T0Y1	Lactobacillus_phage	63.5	9.0e-297
WP_014940213.1|1577666_1578260_-	DUF669 domain-containing protein	NA	Q9T0Y2	Lactobacillus_phage	51.5	5.9e-51
WP_014940214.1|1578276_1579632_-	DEAD/DEAH box helicase	NA	Q9T0Y3	Lactobacillus_phage	61.6	1.7e-154
WP_014940215.1|1579634_1580312_-	AAA family ATPase	NA	B4XYS4	Lactobacillus_phage	60.6	6.5e-78
WP_014940216.1|1580314_1581172_-	DUF1351 domain-containing protein	NA	K4JU67	Streptococcus_phage	27.4	9.0e-08
WP_008213905.1|1581460_1581619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940218.1|1582274_1582550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008213898.1|1582555_1582882_-	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_014940219.1|1582939_1583380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013728334.1|1583354_1583552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044502659.1|1583591_1583792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003555353.1|1583860_1585084_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_003555349.1|1585093_1585831_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_014940222.1|1586001_1586355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008213914.1|1586555_1586783_-	hypothetical protein	NA	A0A0N7IRA0	Lactobacillus_phage	60.0	2.6e-15
WP_014940223.1|1586947_1587661_+	helix-turn-helix domain-containing protein	NA	D7RWL5	Brochothrix_phage	50.4	6.7e-49
WP_014940225.1|1588089_1588710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014940226.1|1589034_1590711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014940227.1|1590949_1592083_+|integrase	tyrosine-type recombinase/integrase	integrase	E9LUS1	Lactobacillus_phage	51.6	3.1e-96
WP_013728339.1|1597833_1599339_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	39.3	1.0e-86
WP_014940228.1|1599398_1600406_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_014940229.1|1600487_1601384_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_014940230.1|1601459_1603595_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQU5	Bathycoccus_sp._RCC1105_virus	47.2	2.0e-104
WP_013728343.1|1603668_1604211_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	30.5	3.6e-10
WP_014940231.1|1604236_1605619_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_014940232.1|1605717_1606224_-	RNA-binding protein S1	NA	NA	NA	NA	NA
WP_013728346.1|1606357_1606768_-	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_013728347.1|1606871_1607144_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_014940233.1|1607130_1608729_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_044502755.1|1608718_1612228_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
1609285:1609301	attR	ACCCAACCGAATCAACA	NA	NA	NA	NA
WP_014940235.1|1612270_1612831_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
