The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	4381	87788	2064154	protease,head,bacteriocin,transposase,tRNA,portal,capsid,holin,tail,terminase,integrase	Streptococcus_phage(77.27%)	90	24212:24232	59701:59721
WP_000163932.1|4381_4951_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000258090.1|4951_8461_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_001234978.1|8518_8785_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_000041909.1|8777_9146_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_014947309.1|9265_10534_+	serine hydrolase	NA	NA	NA	NA	NA
WP_001208983.1|10530_11808_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A7K9Y8	Acanthocystis_turfacea_chlorella_virus	24.1	2.5e-06
WP_000892184.1|11811_12354_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	28.9	2.7e-10
WP_000744537.1|12369_14328_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	H8ZJI5	Ostreococcus_tauri_virus	45.8	5.4e-109
WP_000588897.1|14449_14929_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000939546.1|22363_22600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205044.1|22830_24117_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	37.1	2.7e-72
24212:24232	attL	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
WP_000876726.1|24348_25497_-|integrase	site-specific integrase	integrase	A0A1S5S8M0	Streptococcus_phage	100.0	1.6e-217
WP_001174227.1|25671_26484_-	restriction endonuclease	NA	A0A1S5S8D3	Streptococcus_phage	100.0	5.7e-129
WP_000285962.1|26914_27178_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	100.0	1.2e-43
WP_000156422.1|27177_27411_-	hypothetical protein	NA	A0A1S5S8D5	Streptococcus_phage	100.0	4.7e-36
WP_000495824.1|27410_27779_-	helix-turn-helix transcriptional regulator	NA	A0A1S5S8C4	Streptococcus_phage	100.0	3.2e-63
WP_001001334.1|28063_28210_+	hypothetical protein	NA	A0A141E188	Streptococcus_phage	100.0	2.5e-19
WP_000573356.1|28253_28628_+	hypothetical protein	NA	A0A1S5S8E6	Streptococcus_phage	100.0	3.5e-65
WP_000032100.1|28620_28824_+	hypothetical protein	NA	A0A1S5S8F3	Streptococcus_phage	100.0	1.2e-27
WP_001844639.1|28840_29038_+	hypothetical protein	NA	A0A1S5SEL5	Streptococcus_phage	98.5	1.4e-28
WP_001004503.1|29048_29210_+	hypothetical protein	NA	A0A1S5S8H5	Streptococcus_phage	100.0	4.5e-22
WP_000456433.1|29204_29630_-	hypothetical protein	NA	A0A1S5S8M8	Streptococcus_phage	100.0	2.1e-37
WP_001002346.1|29683_30397_+	ORF6C domain-containing protein	NA	A0A1S5S8E1	Streptococcus_phage	100.0	5.2e-134
WP_000370958.1|30409_30667_+	hypothetical protein	NA	A0A1S5SFD5	Streptococcus_phage	100.0	1.2e-43
WP_000462827.1|30752_31073_+	hypothetical protein	NA	A0A1S5S8E5	Streptococcus_phage	100.0	5.6e-48
WP_001156934.1|31088_31385_+	hypothetical protein	NA	A0A1S5S8D4	Streptococcus_phage	100.0	4.0e-48
WP_000511762.1|32192_32351_+	hypothetical protein	NA	A0A1S5S8F5	Streptococcus_phage	100.0	1.3e-24
WP_000228214.1|32344_33115_+	ATP-binding protein	NA	A0A1S5S8G3	Streptococcus_phage	100.0	5.2e-140
WP_000470303.1|33129_33324_+	hypothetical protein	NA	A0A1S5SCY7	Streptococcus_phage	100.0	1.8e-28
WP_000891963.1|33323_33551_+	hypothetical protein	NA	A0A1S5S8I1	Streptococcus_phage	100.0	2.3e-40
WP_000233203.1|33677_33845_+	hypothetical protein	NA	A0A1S5SEY3	Streptococcus_phage	100.0	5.0e-24
WP_000872730.1|33831_34041_+	hypothetical protein	NA	A0A1S5S8G8	Streptococcus_phage	100.0	8.5e-29
WP_000969678.1|34012_34342_+	hypothetical protein	NA	A0A141E1Y9	Streptococcus_phage	100.0	2.3e-60
WP_000772905.1|34331_34757_+	DUF1642 domain-containing protein	NA	A0A1S5S8E4	Streptococcus_phage	100.0	1.2e-77
WP_000612387.1|35267_35657_+	hypothetical protein	NA	A0A1S5S8G9	Streptococcus_phage	100.0	4.7e-73
WP_001067627.1|35656_35893_+	DUF3310 domain-containing protein	NA	A0A1S5S8G0	Streptococcus_phage	100.0	6.0e-39
WP_153231720.1|35889_36048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000736391.1|36259_36661_+	transcriptional activator	NA	A0A1S5S8P9	Streptococcus_phage	100.0	6.2e-68
WP_000397552.1|36849_37392_+|integrase	site-specific integrase	integrase	A0A1S5S8G1	Streptococcus_phage	100.0	1.4e-99
WP_000238198.1|37555_37747_+	hypothetical protein	NA	A0A1S5S8H4	Streptococcus_phage	100.0	3.2e-30
WP_000282422.1|37866_38187_+	HNH endonuclease	NA	A0A1S5SFJ3	Streptococcus_phage	100.0	2.7e-58
WP_001118282.1|38324_38717_+|terminase	P27 family phage terminase small subunit	terminase	A0A1S5S8F2	Streptococcus_phage	100.0	1.6e-65
WP_000527303.1|38709_40440_+|terminase	terminase large subunit	terminase	A0A1S5S8L1	Streptococcus_phage	100.0	0.0e+00
WP_001002923.1|40447_40666_+	hypothetical protein	NA	A0A1S5SEK2	Streptococcus_phage	100.0	1.3e-32
WP_000510807.1|40683_41886_+|portal	phage portal protein	portal	A0A1S5S8H6	Streptococcus_phage	100.0	8.8e-227
WP_001172113.1|41869_42445_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1S5S8L3	Streptococcus_phage	100.0	2.6e-104
WP_001037661.1|42441_43614_+|capsid	phage major capsid protein	capsid	A0A1S5S8J5	Streptococcus_phage	100.0	1.6e-180
WP_000120767.1|43625_43916_+	hypothetical protein	NA	A0A1S5S8Q9	Streptococcus_phage	100.0	7.7e-36
WP_000371962.1|43918_44200_+|head,tail	phage head-tail connector protein	head,tail	A0A1S5S8H0	Streptococcus_phage	100.0	1.8e-45
WP_000267061.1|44186_44486_+|head	phage head closure protein	head	A0A1S5S8I2	Streptococcus_phage	100.0	3.7e-49
WP_000063886.1|44482_44830_+	HK97 gp10 family phage protein	NA	A0A1S5SEL8	Streptococcus_phage	100.0	8.8e-47
WP_000777003.1|44826_45150_+	hypothetical protein	NA	A0A1S5SEP5	Streptococcus_phage	100.0	3.5e-53
WP_000191278.1|45161_45740_+	hypothetical protein	NA	A0A1S5S8L9	Streptococcus_phage	100.0	2.6e-107
WP_001227145.1|45751_46171_+	hypothetical protein	NA	A0A1S5S8H9	Streptococcus_phage	100.0	8.7e-73
WP_000918322.1|46448_49208_+	hypothetical protein	NA	A0A1S5S8I3	Streptococcus_phage	100.0	2.4e-288
WP_000589852.1|49204_49927_+	hypothetical protein	NA	A0A1S5S8M4	Streptococcus_phage	100.0	1.8e-134
WP_001844648.1|49927_53149_+|tail	phage tail protein	tail	A0A1S5S8K1	Streptococcus_phage	100.0	0.0e+00
WP_001091109.1|56507_56711_+	hypothetical protein	NA	A0A060QN53	Streptococcus_phage	100.0	1.3e-26
WP_000852247.1|56713_57064_+	hypothetical protein	NA	A0A1S5S8I0	Streptococcus_phage	100.0	2.8e-64
WP_001165344.1|57073_57490_+|holin	phage holin family protein	holin	A0A1S5SCE8	Streptococcus_phage	100.0	1.9e-67
WP_001186237.1|57493_57829_+|holin	phage holin	holin	A0A1S5S8N1	Streptococcus_phage	100.0	7.5e-51
WP_000350458.1|57828_58785_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A1S5S8I6	Streptococcus_phage	100.0	1.5e-144
WP_001209433.1|59054_59234_-	hypothetical protein	NA	Q3BLW4	Phage_SK137	96.6	3.5e-23
WP_001030863.1|59375_59525_-	hypothetical protein	NA	C5J952	Streptococcus_phage	95.9	9.1e-17
WP_000291875.1|59806_60274_+	nucleoside deaminase	NA	NA	NA	NA	NA
59701:59721	attR	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
WP_000701992.1|60460_60904_+	dUTP diphosphatase	NA	Q2WG49	Clostridium_botulinum_D_phage	47.3	2.1e-29
WP_000691236.1|60905_61421_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_078065389.1|61434_62796_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_001809263.1|62868_63366_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_001844651.1|63390_63585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001819301.1|63566_64190_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000010163.1|64334_65303_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	34.7	4.0e-44
WP_000492760.1|65844_66078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_161801537.1|66082_66187_-	damage-inducible protein CinA	NA	NA	NA	NA	NA
WP_060544779.1|66401_66752_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
WP_001844860.1|67007_69641_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.1	1.3e-57
WP_000076480.1|69725_70163_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000009173.1|70525_71536_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
WP_000366351.1|71684_72854_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_000616164.1|72850_73621_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_000717461.1|73617_74610_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_000136447.1|74615_74849_+	acyl carrier protein	NA	A0A2I7RIC8	Vibrio_phage	40.6	3.3e-05
WP_001093075.1|75387_75618_+|bacteriocin	bacteriocin-like peptide BlpU	bacteriocin	NA	NA	NA	NA
WP_000668301.1|76332_78486_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.2	5.5e-46
WP_000801608.1|78498_79848_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_000043300.1|80017_80725_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.8e-41
WP_000361197.1|80926_84652_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	3.3e-38
WP_000220665.1|84744_86187_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.9	2.2e-54
WP_000182586.1|86223_87246_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.6e-64
WP_001844573.1|87242_87788_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.9	4.1e-22
>prophage 2
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	140424	180005	2064154	protease,tRNA,bacteriocin	Planktothrix_phage(33.33%)	31	NA	NA
WP_001230167.1|140424_140709_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014947313.1|140763_142872_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571037.1|142868_143510_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	6.7e-24
WP_001038470.1|143716_144523_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_114865980.1|144488_144959_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001189280.1|145248_145569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424422.1|146332_146713_+|bacteriocin	SP_0115 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_001844753.1|147086_148145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424407.1|149812_150187_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619752.1|150394_151297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424427.1|151352_151706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072905.1|151702_152431_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770316.1|153562_153802_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014947314.1|154351_156307_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282978.1|156707_157829_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193606.1|157969_158425_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|158434_160348_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331961.1|160726_162406_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639574.1|162407_162641_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000977347.1|163446_163599_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
WP_000180803.1|163600_163786_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
WP_014947315.1|163963_164647_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000569807.1|164643_165081_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_000655036.1|165070_166081_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	NA	NA	NA	NA
WP_000288029.1|170857_172474_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	36.0	3.0e-28
WP_041178999.1|174917_175667_+	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_001017606.1|175679_176852_+	nucleotide sugar dehydrogenase	NA	M1IJ73	Paramecium_bursaria_Chlorella_virus	43.2	9.2e-80
WP_000570712.1|177246_178110_+	XRE/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000933479.1|178395_178629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000738307.1|178650_179328_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000720788.1|179339_180005_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	334500	392886	2064154	holin,transposase,protease,integrase	Streptococcus_phage(23.08%)	48	369993:370006	393810:393823
WP_001844480.1|334500_336606_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.6	5.8e-117
WP_000032550.1|337467_337950_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_000743576.1|338044_339529_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156799.1|339681_341289_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_001022232.1|341447_341621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000091069.1|344187_345633_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	59.9	3.1e-133
WP_000565348.1|345634_346366_+	tyrosine-protein phosphatase CpsB	NA	NA	NA	NA	NA
WP_014947320.1|346374_347067_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	56.8	4.6e-63
WP_001142516.1|347076_347742_+	polysaccharide biosynthesis tyrosine autokinase CpsD	NA	A0A1X9I5D6	Streptococcus_phage	60.7	1.4e-72
WP_001053205.1|347882_349019_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_001079795.1|349011_349563_+	acyltransferase	NA	NA	NA	NA	NA
WP_000862350.1|349559_350714_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_000672721.1|350830_352135_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_001818726.1|352320_353490_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_001214397.1|353557_354628_+	UDP-glucuronate 4-epimerase Gla	NA	A0A291LAD7	Escherichia_phage	27.6	7.3e-23
WP_000685088.1|354656_355889_+	nucleotide sugar dehydrogenase	NA	M1I6D5	Acanthocystis_turfacea_Chlorella_virus	49.9	6.3e-103
WP_000268343.1|356104_356287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000676139.1|358094_358952_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	61.1	7.4e-95
WP_000131462.1|358952_359549_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	33.1	5.1e-10
WP_000141505.1|359558_360608_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	45.1	8.3e-72
WP_000927994.1|361599_362034_+|transposase	transposase	transposase	A0A218MNE7	uncultured_virus	24.6	2.1e-05
WP_000842582.1|362950_364933_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001844744.1|365233_370537_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA	NA
369993:370006	attL	CAAAAGACATTGAT	NA	NA	NA	NA
WP_001040012.1|370703_372863_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_000248788.1|372859_373456_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.3	9.6e-17
WP_000179547.1|373521_374049_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_000146522.1|374118_374448_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711391.1|374933_376091_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039273.1|376103_377498_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158781.1|377573_378998_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	1.6e-41
WP_000518018.1|379009_379699_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000771110.1|379796_380816_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000765670.1|380933_382166_-	MFS transporter	NA	NA	NA	NA	NA
WP_001844742.1|382325_382796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_179130704.1|382962_383373_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000206971.1|383903_384026_+|holin	choline-binding protein C	holin	NA	NA	NA	NA
WP_000163315.1|384147_385026_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373458.1|385007_385961_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562430.1|385947_386955_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210617.1|386938_387949_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224637.1|388025_388724_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743661.1|388720_389716_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698434.1|389729_390362_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001808881.1|390362_390605_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_075588398.1|390529_390841_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_000754501.1|391281_391521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001844741.1|391565_392195_+|protease	serine protease	protease	NA	NA	NA	NA
WP_000378125.1|392493_392886_+|integrase	tyrosine-type recombinase/integrase	integrase	C9E2L6	Enterococcus_phage	41.4	3.6e-20
393810:393823	attR	CAAAAGACATTGAT	NA	NA	NA	NA
>prophage 4
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	449565	512306	2064154	transposase,tRNA,bacteriocin	Klosneuvirus(16.67%)	57	NA	NA
WP_001808894.1|449565_449736_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000628994.1|450558_451782_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_001059634.1|451949_453272_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000236919.1|453273_455160_+	DUF4838 domain-containing protein	NA	NA	NA	NA	NA
WP_000836780.1|455327_455672_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000429426.1|455681_457094_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_000359734.1|457163_458843_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001845061.1|458968_460408_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691674.1|460411_461761_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|461948_462797_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403162.1|462811_463360_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693286.1|463366_463624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656547.1|463725_465408_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	7.7e-19
WP_001148103.1|465392_466223_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181374.1|466415_466919_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185835.1|467371_467935_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_000678693.1|467948_468575_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867290.1|468602_468992_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_000333653.1|468996_469446_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000418402.1|469573_470161_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105242.1|470550_472158_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	8.9e-142
WP_000026645.1|472716_474348_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795217.1|474640_479581_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|479670_480867_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119905.1|481002_481530_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659547.1|481606_481963_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_001122900.1|481999_483346_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|483435_483555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014947321.1|483788_485135_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	39.8	2.2e-77
WP_001067590.1|485520_485658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220758.1|485828_487109_+	restriction endonuclease subunit S	NA	A0A1V0SKS6	Klosneuvirus	29.2	6.9e-12
WP_000651177.1|487165_487963_+	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.3e-21
WP_078465263.1|487973_488579_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000187274.1|488526_490074_-	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	26.1	9.9e-13
WP_000029046.1|490073_491537_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_001844842.1|491549_493883_-	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	26.3	1.5e-25
WP_001088691.1|494490_495000_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255779.1|495163_496198_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|496224_496749_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|497228_499052_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000115730.1|499064_499418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001836079.1|499622_500759_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.3	2.4e-24
WP_001845059.1|501080_501455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777760.1|501616_501904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278301.1|501913_502324_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889923.1|502391_503123_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653768.1|503119_504169_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132583.1|504336_504666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682136.1|504942_505281_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219137.1|505285_506023_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001099894.1|506036_507377_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000358812.1|507420_507576_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069064.1|507632_508994_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_000205159.1|509004_511158_-	peptide cleavage/export ABC transporter BlpA	NA	W8CYL7	Bacillus_phage	27.7	2.4e-41
WP_001093255.1|511439_511694_+|bacteriocin	two-peptide bacteriocin subunit BlpM	bacteriocin	NA	NA	NA	NA
WP_001099490.1|511709_511913_+|bacteriocin	two-peptide bacteriocin subunit BlpN	bacteriocin	NA	NA	NA	NA
WP_001809846.1|512156_512306_+|bacteriocin	bacteriocin-like peptide BlpO	bacteriocin	NA	NA	NA	NA
>prophage 5
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	867842	877484	2064154	holin	Streptococcus_phage(88.89%)	10	NA	NA
WP_000728264.1|867842_869726_+|holin	phosphorylcholine esterase CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	23.7	9.5e-10
WP_001844793.1|869805_870936_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000254688.1|870945_872208_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	65.0	2.3e-140
WP_000689700.1|872211_873009_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.9	1.1e-60
WP_000033388.1|873228_873867_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	2.9e-75
WP_000806708.1|873863_874754_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	6.4e-73
WP_000358228.1|874793_875111_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166878.1|875113_875983_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	2.3e-115
WP_001261452.1|876209_876728_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000345254.1|876836_877484_+	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	33.7	7.0e-13
>prophage 6
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	1318757	1360858	2064154	holin,transposase,tRNA	Streptococcus_phage(21.43%)	48	NA	NA
WP_001811052.1|1318757_1318916_-|transposase	transposase domain-containing protein	transposase	NA	NA	NA	NA
WP_001844746.1|1319508_1320228_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000691850.1|1320208_1320403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000152348.1|1320573_1320924_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_025172508.1|1320904_1321090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000065723.1|1321393_1322956_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.4e-19
WP_000936189.1|1323097_1323796_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000071665.1|1323838_1324735_-	EamA family transporter	NA	NA	NA	NA	NA
WP_000872220.1|1324743_1325679_-	serine hydrolase	NA	NA	NA	NA	NA
WP_001102214.1|1325675_1326401_-	CppA family protein	NA	NA	NA	NA	NA
WP_000290648.1|1326484_1327120_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.2	4.3e-07
WP_000972921.1|1327121_1327949_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001844748.1|1328307_1329024_-	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	31.1	2.1e-26
WP_001272941.1|1329546_1330158_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855749.1|1330202_1330931_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272302.1|1330969_1331881_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.8	4.5e-90
WP_000926600.1|1331946_1332171_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590986.1|1332248_1332992_-	amino acid ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.4	1.6e-13
WP_001103449.1|1332991_1333792_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|1333949_1334306_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170353.1|1334318_1334831_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.0	1.1e-45
WP_000405832.1|1334830_1335325_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858730.1|1335459_1335906_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097986.1|1335902_1336550_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689945.1|1336570_1337152_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138517.1|1337152_1338028_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036769.1|1338179_1339559_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_025172517.1|1339853_1340777_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915945.1|1340836_1341442_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	4.5e-54
WP_000673680.1|1341459_1342704_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	3.8e-55
WP_000371286.1|1342926_1343184_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_001844898.1|1343225_1345262_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038731.1|1345521_1346439_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_012677106.1|1346807_1347134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001846081.1|1347100_1347385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099682.1|1347657_1348500_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	2.2e-51
WP_001844203.1|1348613_1350005_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001813436.1|1350239_1350617_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
WP_000915901.1|1350831_1351809_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_000850587.1|1351805_1352888_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.0	5.2e-37
WP_001040724.1|1354381_1355578_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_000348122.1|1356453_1357323_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248973.1|1357545_1358226_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_001021429.1|1358183_1359290_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_001833808.1|1359400_1359655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200313.1|1360012_1360546_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001844799.1|1360532_1360748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001833809.1|1360714_1360858_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 7
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	1424490	1431244	2064154	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081003.1|1424490_1425459_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
WP_000011306.1|1425492_1426404_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
WP_001231086.1|1426400_1427378_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_001844990.1|1427374_1428265_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.9	1.1e-05
WP_001140412.1|1428316_1428697_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|1428707_1429295_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000106346.1|1429303_1430536_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
WP_000442275.1|1430567_1430738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162486.1|1430737_1431244_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	43.1	2.3e-27
>prophage 8
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	1689092	1696424	2064154		uncultured_Mediterranean_phage(33.33%)	10	NA	NA
WP_000167817.1|1689092_1689794_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.5	9.2e-35
WP_001108391.1|1689809_1689920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000777248.1|1690216_1691176_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	4.0e-57
WP_001193669.1|1691165_1692122_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764310.1|1692118_1692871_+	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.2	3.7e-13
WP_000858242.1|1692966_1693932_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000821640.1|1694156_1694399_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
WP_001222228.1|1694398_1695121_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000105314.1|1695107_1695677_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	6.6e-15
WP_000351904.1|1695695_1696424_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	9.0e-09
>prophage 9
NC_018630	Streptococcus pneumoniae gamPNI0373, complete sequence	2064154	2042652	2051406	2064154		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510406.1|2042652_2043492_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	27.6	8.2e-14
WP_000835715.1|2043476_2044304_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	33.3	3.5e-17
WP_000712132.1|2044300_2044846_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227958.1|2044856_2045678_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170194.1|2045719_2047003_-	insulinase family protein	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	30.0	1.1e-17
WP_000424262.1|2046999_2048250_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.3	2.7e-93
WP_000455903.1|2048408_2048777_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266662.1|2048779_2049877_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|2049927_2051406_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
