assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	1	33638-33733	1	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GCGCGAGCTCAGTTCATTGTCTTTGCGAC	29	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|124aa|up_7|NC_019729.1_24154_24526_-,NA|60aa|down_6|NC_019729.1_45834_46014_-,NA|66aa|down_7|NC_019729.1_47820_48018_+,NA|67aa|down_8|NC_019729.1_48935_49136_+	NA|174aa|up_9|NC_019729.1_22998_23520_+	pfam07209, DUF1415, Protein of unknown function (DUF1415)	NA|115aa|up_8|NC_019729.1_23595_23940_+	pfam10664, NdhM, Cyanobacterial and plastid NDH-1 subunit M	NA|124aa|up_7|NC_019729.1_24154_24526_-	NA	NA|773aa|up_6|NC_019729.1_25671_27990_+	PRK14559, PRK14559, serine/threonine phosphatase	NA|232aa|up_5|NC_019729.1_28300_28996_-	pfam03783, CsgG, Curli production assembly/transport component CsgG	NA|122aa|up_4|NC_019729.1_29289_29655_-	pfam08853, DUF1823, Domain of unknown function (DUF1823)	NA|344aa|up_3|NC_019729.1_29805_30837_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|103aa|up_2|NC_019729.1_31306_31615_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|324aa|up_1|NC_019729.1_31619_32591_-	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily	NA|245aa|up_0|NC_019729.1_32794_33529_-	COG0678, AHP1, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|214aa|down_0|NC_019729.1_33758_34400_-	cd06260, DUF820, Domain of unknown function (DUF820)	NA|661aa|down_1|NC_019729.1_34442_36425_-	sd00006, TPR, Tetratricopeptide repeat	NA|1364aa|down_2|NC_019729.1_36417_40509_-	pfam04577, DUF563, Protein of unknown function (DUF563)	NA|950aa|down_3|NC_019729.1_40533_43383_-	pfam04577, DUF563, Protein of unknown function (DUF563)	NA|288aa|down_4|NC_019729.1_43660_44524_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|37aa|down_5|NC_019729.1_45399_45510_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|60aa|down_6|NC_019729.1_45834_46014_-	NA	NA|66aa|down_7|NC_019729.1_47820_48018_+	NA	NA|67aa|down_8|NC_019729.1_48935_49136_+	NA	NA|250aa|down_9|NC_019729.1_50699_51449_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	2	377580-377742	2	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AATCAAATATCTGATATTAGTCCCTTGAAA	30	0	0	NA	NA	NA	2	2	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|259aa|up_8|NC_019729.1_353591_354368_+,NA|1174aa|up_5|NC_019729.1_358656_362178_-,NA|379aa|up_1|NC_019729.1_372256_373393_+,NA|53aa|down_0|NC_019729.1_378861_379020_+,NA|75aa|down_1|NC_019729.1_379134_379359_+,NA|70aa|down_7|NC_019729.1_387856_388066_-	NA|72aa|up_9|NC_019729.1_353209_353425_+	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|259aa|up_8|NC_019729.1_353591_354368_+	NA	NA|208aa|up_7|NC_019729.1_354802_355426_+	pfam05685, Uma2, Putative restriction endonuclease	NA|957aa|up_6|NC_019729.1_355679_358550_-	pfam16313, DUF4953, Met-zincin	NA|1174aa|up_5|NC_019729.1_358656_362178_-	NA	NA|1950aa|up_4|NC_019729.1_362816_368666_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|455aa|up_3|NC_019729.1_368686_370051_+	pfam14903, WG_beta_rep, WG containing repeat	NA|386aa|up_2|NC_019729.1_370845_372003_+	cd20216, PFM_HFR-2-like, pore-forming module of wheat HFR-2 toxin, FEM32, and similar aerolysin-type beta-barrel pore-forming proteins	NA|379aa|up_1|NC_019729.1_372256_373393_+	NA	NA|1084aa|up_0|NC_019729.1_373862_377114_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins	NA|53aa|down_0|NC_019729.1_378861_379020_+	NA	NA|75aa|down_1|NC_019729.1_379134_379359_+	NA	NA|1042aa|down_2|NC_019729.1_379781_382907_+	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	NA|186aa|down_3|NC_019729.1_384320_384878_-	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]	NA|189aa|down_4|NC_019729.1_385260_385827_-	pfam09626, DHC, Dihaem cytochrome c	NA|303aa|down_5|NC_019729.1_385847_386756_-	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain	NA|171aa|down_6|NC_019729.1_387277_387790_-	cd00412, pyrophosphatase, Inorganic pyrophosphatase	NA|70aa|down_7|NC_019729.1_387856_388066_-	NA	NA|470aa|down_8|NC_019729.1_388159_389569_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|435aa|down_9|NC_019729.1_389712_391017_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	3	377910-378204	3	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AATCAAATATCTGATATTAGTCCCTTGAAA	30	0	0	NA	NA	NA	4	4	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|259aa|up_8|NC_019729.1_353591_354368_+,NA|1174aa|up_5|NC_019729.1_358656_362178_-,NA|379aa|up_1|NC_019729.1_372256_373393_+,NA|53aa|down_0|NC_019729.1_378861_379020_+,NA|75aa|down_1|NC_019729.1_379134_379359_+,NA|70aa|down_7|NC_019729.1_387856_388066_-	NA|72aa|up_9|NC_019729.1_353209_353425_+	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|259aa|up_8|NC_019729.1_353591_354368_+	NA	NA|208aa|up_7|NC_019729.1_354802_355426_+	pfam05685, Uma2, Putative restriction endonuclease	NA|957aa|up_6|NC_019729.1_355679_358550_-	pfam16313, DUF4953, Met-zincin	NA|1174aa|up_5|NC_019729.1_358656_362178_-	NA	NA|1950aa|up_4|NC_019729.1_362816_368666_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|455aa|up_3|NC_019729.1_368686_370051_+	pfam14903, WG_beta_rep, WG containing repeat	NA|386aa|up_2|NC_019729.1_370845_372003_+	cd20216, PFM_HFR-2-like, pore-forming module of wheat HFR-2 toxin, FEM32, and similar aerolysin-type beta-barrel pore-forming proteins	NA|379aa|up_1|NC_019729.1_372256_373393_+	NA	NA|1084aa|up_0|NC_019729.1_373862_377114_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins	NA|53aa|down_0|NC_019729.1_378861_379020_+	NA	NA|75aa|down_1|NC_019729.1_379134_379359_+	NA	NA|1042aa|down_2|NC_019729.1_379781_382907_+	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	NA|186aa|down_3|NC_019729.1_384320_384878_-	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]	NA|189aa|down_4|NC_019729.1_385260_385827_-	pfam09626, DHC, Dihaem cytochrome c	NA|303aa|down_5|NC_019729.1_385847_386756_-	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain	NA|171aa|down_6|NC_019729.1_387277_387790_-	cd00412, pyrophosphatase, Inorganic pyrophosphatase	NA|70aa|down_7|NC_019729.1_387856_388066_-	NA	NA|470aa|down_8|NC_019729.1_388159_389569_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|435aa|down_9|NC_019729.1_389712_391017_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	4	378303-378464	4	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AATCAAATATCTGATATTAGTCCCTTGAAA	30	0	0	NA	NA	NA	2	2	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|259aa|up_8|NC_019729.1_353591_354368_+,NA|1174aa|up_5|NC_019729.1_358656_362178_-,NA|379aa|up_1|NC_019729.1_372256_373393_+,NA|53aa|down_0|NC_019729.1_378861_379020_+,NA|75aa|down_1|NC_019729.1_379134_379359_+,NA|70aa|down_7|NC_019729.1_387856_388066_-	NA|72aa|up_9|NC_019729.1_353209_353425_+	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|259aa|up_8|NC_019729.1_353591_354368_+	NA	NA|208aa|up_7|NC_019729.1_354802_355426_+	pfam05685, Uma2, Putative restriction endonuclease	NA|957aa|up_6|NC_019729.1_355679_358550_-	pfam16313, DUF4953, Met-zincin	NA|1174aa|up_5|NC_019729.1_358656_362178_-	NA	NA|1950aa|up_4|NC_019729.1_362816_368666_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|455aa|up_3|NC_019729.1_368686_370051_+	pfam14903, WG_beta_rep, WG containing repeat	NA|386aa|up_2|NC_019729.1_370845_372003_+	cd20216, PFM_HFR-2-like, pore-forming module of wheat HFR-2 toxin, FEM32, and similar aerolysin-type beta-barrel pore-forming proteins	NA|379aa|up_1|NC_019729.1_372256_373393_+	NA	NA|1084aa|up_0|NC_019729.1_373862_377114_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins	NA|53aa|down_0|NC_019729.1_378861_379020_+	NA	NA|75aa|down_1|NC_019729.1_379134_379359_+	NA	NA|1042aa|down_2|NC_019729.1_379781_382907_+	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	NA|186aa|down_3|NC_019729.1_384320_384878_-	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]	NA|189aa|down_4|NC_019729.1_385260_385827_-	pfam09626, DHC, Dihaem cytochrome c	NA|303aa|down_5|NC_019729.1_385847_386756_-	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain	NA|171aa|down_6|NC_019729.1_387277_387790_-	cd00412, pyrophosphatase, Inorganic pyrophosphatase	NA|70aa|down_7|NC_019729.1_387856_388066_-	NA	NA|470aa|down_8|NC_019729.1_388159_389569_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|435aa|down_9|NC_019729.1_389712_391017_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	5	533394-533474	5	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CCTGTTCCACAAGAGATTAATGTT	24	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|303aa|up_4|NC_019729.1_525912_526821_+,NA|63aa|down_8|NC_019729.1_542179_542368_-,NA|176aa|down_9|NC_019729.1_542936_543464_-	NA|328aa|up_9|NC_019729.1_519609_520593_-	PRK05363, PRK05363, protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA|685aa|up_8|NC_019729.1_521093_523148_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|329aa|up_7|NC_019729.1_523336_524323_-	cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)	NA|247aa|up_6|NC_019729.1_524374_525115_-	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs	NA|190aa|up_5|NC_019729.1_525287_525857_+	sd00006, TPR, Tetratricopeptide repeat	NA|303aa|up_4|NC_019729.1_525912_526821_+	NA	NA|98aa|up_3|NC_019729.1_526971_527265_+	pfam11691, DUF3288, Protein of unknown function (DUF3288)	NA|90aa|up_2|NC_019729.1_529604_529874_-	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|85aa|up_1|NC_019729.1_529836_530091_-	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|939aa|up_0|NC_019729.1_530332_533149_-	PRK12902, secA, preprotein translocase subunit SecA; Reviewed	NA|313aa|down_0|NC_019729.1_533555_534494_-	TIGR02651, Ribonuclease_Z, ribonuclease Z	NA|392aa|down_1|NC_019729.1_534764_535940_+	COG2385, SpoIID, Sporulation protein and related proteins [Cell division and chromosome partitioning]	NA|75aa|down_2|NC_019729.1_536274_536499_+	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|439aa|down_3|NC_019729.1_536692_538009_-	PLN03138, PLN03138, Protein TOC75; Provisional	NA|174aa|down_4|NC_019729.1_538636_539158_+	PRK02603, PRK02603, photosystem I assembly protein Ycf3; Provisional	NA|94aa|down_5|NC_019729.1_539341_539623_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|239aa|down_6|NC_019729.1_539832_540549_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|544aa|down_7|NC_019729.1_540505_542137_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|63aa|down_8|NC_019729.1_542179_542368_-	NA	NA|176aa|down_9|NC_019729.1_542936_543464_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	6	542295-542380	6	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GCGATCGTCATTACCTCTTGTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|176aa|down_0|NC_019729.1_542936_543464_-,NA|129aa|down_3|NC_019729.1_547280_547667_-	NA|85aa|up_9|NC_019729.1_529836_530091_-	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|939aa|up_8|NC_019729.1_530332_533149_-	PRK12902, secA, preprotein translocase subunit SecA; Reviewed	NA|313aa|up_7|NC_019729.1_533555_534494_-	TIGR02651, Ribonuclease_Z, ribonuclease Z	NA|392aa|up_6|NC_019729.1_534764_535940_+	COG2385, SpoIID, Sporulation protein and related proteins [Cell division and chromosome partitioning]	NA|75aa|up_5|NC_019729.1_536274_536499_+	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|439aa|up_4|NC_019729.1_536692_538009_-	PLN03138, PLN03138, Protein TOC75; Provisional	NA|174aa|up_3|NC_019729.1_538636_539158_+	PRK02603, PRK02603, photosystem I assembly protein Ycf3; Provisional	NA|94aa|up_2|NC_019729.1_539341_539623_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|239aa|up_1|NC_019729.1_539832_540549_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|544aa|up_0|NC_019729.1_540505_542137_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|176aa|down_0|NC_019729.1_542936_543464_-	NA	NA|905aa|down_1|NC_019729.1_543684_546399_-	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp	NA|135aa|down_2|NC_019729.1_546743_547148_+	pfam04972, BON, BON domain	NA|129aa|down_3|NC_019729.1_547280_547667_-	NA	NA|226aa|down_4|NC_019729.1_548230_548908_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|427aa|down_5|NC_019729.1_548926_550207_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|186aa|down_6|NC_019729.1_550285_550843_+	pfam11322, DUF3124, Protein of unknown function (DUF3124)	NA|320aa|down_7|NC_019729.1_551480_552440_+	cd19085, AKR_AKR11B3, Synechococcus sp	NA|624aa|down_8|NC_019729.1_552636_554508_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|189aa|down_9|NC_019729.1_554532_555099_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	7	603426-604860	1,7,1,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	WYL,cas10,cmr4gr7,cmr5gr11,csx1,RT,Cas9_archaeal	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type III-B,Type III-D,Type III-A,Type III-C	CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC,CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC,CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC,CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC,CTCCCCACTCGTTGGGGAAACTAATTGAATGGAAAC	36,36,36,36,36	0	0	NA	NA	NA:NA:NA:NA:NA	16,19,19,16,16	19	TypeIII-B,TypeIII-D,TypeIII-A,TypeIII-C	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	cmr5gr11|143aa|up_2|NC_019729.1_599310_599739_+,NA|575aa|up_1|NC_019729.1_599731_601456_+,csx1|499aa|up_0|NC_019729.1_601458_602955_+,NA|496aa|down_3|NC_019729.1_608980_610468_+,NA|58aa|down_4|NC_019729.1_610536_610710_+,NA|135aa|down_5|NC_019729.1_610828_611233_+	c2c9_V-U4|364aa|up_9|NC_019729.1_583221_584313_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|1035aa|up_8|NC_019729.1_585622_588727_+	pfam07690, MFS_1, Major Facilitator Superfamily	NA|1533aa|up_7|NC_019729.1_589737_594336_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	WYL|393aa|up_6|NC_019729.1_594528_595707_-	pfam13280, WYL, WYL domain	cas10|520aa|up_5|NC_019729.1_595952_597512_+	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	NA|329aa|up_4|NC_019729.1_597487_598474_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cmr4gr7|278aa|up_3|NC_019729.1_598473_599307_+	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr5gr11|143aa|up_2|NC_019729.1_599310_599739_+	NA	NA|575aa|up_1|NC_019729.1_599731_601456_+	NA	csx1|499aa|up_0|NC_019729.1_601458_602955_+	NA	NA|203aa|down_0|NC_019729.1_605424_606033_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|201aa|down_1|NC_019729.1_606350_606953_-	cd06260, DUF820, Domain of unknown function (DUF820)	NA|554aa|down_2|NC_019729.1_607244_608906_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|496aa|down_3|NC_019729.1_608980_610468_+	NA	NA|58aa|down_4|NC_019729.1_610536_610710_+	NA	NA|135aa|down_5|NC_019729.1_610828_611233_+	NA	NA|48aa|down_6|NC_019729.1_611497_611641_+	pfam14239, RRXRR, RRXRR protein	RT|571aa|down_7|NC_019729.1_612217_613930_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	Cas9_archaeal|419aa|down_8|NC_019729.1_613916_615173_+	pfam14239, RRXRR, RRXRR protein	NA|1224aa|down_9|NC_019729.1_616018_619690_+	pfam14252, DUF4347, Domain of unknown function (DUF4347)
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	8	648662-650342	4,8,2	PILER-CR,CRISPRCasFinder,CRT	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GTTTCAATCCCCTTGCGGGGAAAAGTGAATTGCGAC,GTTTCAATCCCCTTGCGGGGAAAAGTGAATTGCGAC,GTTTCAATCCCCTTGCGGGGAAAAGTGAATTGCGAC	36,36,36	0	0	NA	NA	NA:NA:NA	22,22,22	22	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|70aa|up_1|NC_019729.1_647968_648178_-,NA|85aa|down_2|NC_019729.1_651864_652119_-,NA|70aa|down_4|NC_019729.1_655781_655991_+,NA|191aa|down_5|NC_019729.1_656266_656839_+	NA|413aa|up_9|NC_019729.1_639685_640924_+	PRK09303, PRK09303, histidine kinase	NA|135aa|up_8|NC_019729.1_641068_641473_-	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|114aa|up_7|NC_019729.1_641654_641996_-	pfam05542, DUF760, Protein of unknown function (DUF760)	NA|320aa|up_6|NC_019729.1_642217_643177_-	PRK07405, PRK07405, RNA polymerase sigma factor SigD; Validated	NA|259aa|up_5|NC_019729.1_643701_644478_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|354aa|up_4|NC_019729.1_645434_646496_-	PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional	NA|158aa|up_3|NC_019729.1_646849_647323_-	pfam11947, DUF3464, Protein of unknown function (DUF3464)	NA|90aa|up_2|NC_019729.1_647418_647688_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|70aa|up_1|NC_019729.1_647968_648178_-	NA	NA|123aa|up_0|NC_019729.1_648183_648552_-	cd10434, GIY-YIG_UvrC_Cho, Catalytic GIY-YIG domain of nucleotide excision repair endonucleases UvrC, Cho, and similar proteins	NA|208aa|down_0|NC_019729.1_650870_651494_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|121aa|down_1|NC_019729.1_651512_651875_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|85aa|down_2|NC_019729.1_651864_652119_-	NA	NA|883aa|down_3|NC_019729.1_652185_654834_-	pfam14516, AAA_35, AAA-like domain	NA|70aa|down_4|NC_019729.1_655781_655991_+	NA	NA|191aa|down_5|NC_019729.1_656266_656839_+	NA	NA|239aa|down_6|NC_019729.1_657075_657792_+	pfam05419, GUN4, GUN4-like	NA|187aa|down_7|NC_019729.1_658004_658565_+	pfam05685, Uma2, Putative restriction endonuclease	NA|112aa|down_8|NC_019729.1_658714_659050_-	PRK14948, PRK14948, DNA polymerase III subunit gamma/tau	NA|338aa|down_9|NC_019729.1_660808_661822_+	sd00006, TPR, Tetratricopeptide repeat
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	9	685940-686041	9	CRISPRCasFinder	no	c2c9_V-U4	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type V-U4	AGGGTGTTTTCTAGGTGGATAAATGTGTTTAA	32	0	0	NA	NA	NA	1	1	TypeV-U4	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|73aa|down_4|NC_019729.1_692216_692435_-	NA|142aa|up_9|NC_019729.1_676642_677068_+	COG3411, COG3411, Ferredoxin [Energy production and conversion]	NA|217aa|up_8|NC_019729.1_677719_678370_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|174aa|up_7|NC_019729.1_678707_679229_+	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|547aa|up_6|NC_019729.1_679565_681206_+	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated	NA|267aa|up_5|NC_019729.1_681350_682151_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|99aa|up_4|NC_019729.1_682402_682699_+	pfam01954, DUF104, Protein of unknown function DUF104	NA|156aa|up_3|NC_019729.1_682692_683160_+	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|349aa|up_2|NC_019729.1_683249_684296_-	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional	NA|238aa|up_1|NC_019729.1_684370_685084_-	cd08582, GDPD_like_2, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases	NA|286aa|up_0|NC_019729.1_685080_685938_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|428aa|down_0|NC_019729.1_686178_687462_-	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|445aa|down_1|NC_019729.1_687483_688818_+	sd00006, TPR, Tetratricopeptide repeat	NA|175aa|down_2|NC_019729.1_689078_689603_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|684aa|down_3|NC_019729.1_690042_692094_+	cd03254, ABCC_Glucan_exporter_like, ATP-binding cassette domain of glucan transporter and related proteins, subfamily C	NA|73aa|down_4|NC_019729.1_692216_692435_-	NA	NA|406aa|down_5|NC_019729.1_692579_693797_-	smart00933, NurA, NurA nuclease	NA|265aa|down_6|NC_019729.1_694207_695002_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|245aa|down_7|NC_019729.1_695104_695839_-	pfam06051, DUF928, Domain of Unknown Function (DUF928)	NA|247aa|down_8|NC_019729.1_695980_696721_-	pfam06051, DUF928, Domain of Unknown Function (DUF928)	NA|596aa|down_9|NC_019729.1_697056_698844_+	COG4252, COG4252, Predicted transmembrane sensor domain [Signal transduction mechanisms]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	10	874065-874136	10	CRISPRCasFinder	no	Cas14u_CAS-V	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	ATCTAAAATCTCAAATCTAAAATC	24	1	1	874089-874112	NC_019729.1_4961158-4961135	NA	1	1	Unclear	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|75aa|up_5|NC_019729.1_867835_868060_-,NA|156aa|up_4|NC_019729.1_868294_868762_-,NA|105aa|up_2|NC_019729.1_870919_871234_-,NA|50aa|down_2|NC_019729.1_876016_876166_+,NA|296aa|down_3|NC_019729.1_876162_877050_-,NA|185aa|down_4|NC_019729.1_877188_877743_-	NA|303aa|up_9|NC_019729.1_864691_865600_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|298aa|up_8|NC_019729.1_865857_866751_+	pfam05685, Uma2, Putative restriction endonuclease	NA|194aa|up_7|NC_019729.1_866935_867517_+	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains	NA|94aa|up_6|NC_019729.1_867554_867836_-	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|up_5|NC_019729.1_867835_868060_-	NA	NA|156aa|up_4|NC_019729.1_868294_868762_-	NA	NA|576aa|up_3|NC_019729.1_869062_870790_-	PRK05945, sdhA, succinate dehydrogenase/fumarate reductase flavoprotein subunit	NA|105aa|up_2|NC_019729.1_870919_871234_-	NA	Cas14u_CAS-V|442aa|up_1|NC_019729.1_871571_872897_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|242aa|up_0|NC_019729.1_873188_873914_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|274aa|down_0|NC_019729.1_874171_874993_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|239aa|down_1|NC_019729.1_875258_875975_-	pfam11210, DUF2996, Protein of unknown function (DUF2996)	NA|50aa|down_2|NC_019729.1_876016_876166_+	NA	NA|296aa|down_3|NC_019729.1_876162_877050_-	NA	NA|185aa|down_4|NC_019729.1_877188_877743_-	NA	NA|39aa|down_5|NC_019729.1_878080_878197_-	PRK11877, psaI, photosystem I reaction center subunit VIII; Reviewed	NA|170aa|down_6|NC_019729.1_878254_878764_-	pfam02605, PsaL, Photosystem I reaction centre subunit XI	NA|239aa|down_7|NC_019729.1_878877_879594_-	TIGR04283, glycosyl_transferase_family_2, transferase 2, rSAM/selenodomain-associated	NA|206aa|down_8|NC_019729.1_880013_880631_-	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated	NA|323aa|down_9|NC_019729.1_880797_881766_-	PRK09375, PRK09375, quinolinate synthase NadA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	11	908224-908400	11	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CGACTTACTGGAAGACCCAGAACTATC	27	0	0	NA	NA	NA	2	2	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|74aa|up_9|NC_019729.1_896721_896943_-,NA|169aa|up_8|NC_019729.1_896942_897449_-,NA|166aa|up_7|NC_019729.1_897445_897943_-,NA|49aa|up_5|NC_019729.1_899804_899951_-,NA|356aa|up_3|NC_019729.1_903992_905059_+,NA|79aa|up_2|NC_019729.1_905129_905366_+,NA|150aa|up_1|NC_019729.1_905482_905932_+,NA|392aa|up_0|NC_019729.1_906001_907177_+,NA|100aa|down_1|NC_019729.1_909924_910224_-,NA|168aa|down_4|NC_019729.1_912387_912891_+	NA|74aa|up_9|NC_019729.1_896721_896943_-	NA	NA|169aa|up_8|NC_019729.1_896942_897449_-	NA	NA|166aa|up_7|NC_019729.1_897445_897943_-	NA	NA|478aa|up_6|NC_019729.1_898174_899608_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|49aa|up_5|NC_019729.1_899804_899951_-	NA	NA|499aa|up_4|NC_019729.1_900497_901994_+	cd10798, GH57N_like_1, Uncharacterized subfamily of  glycoside hydrolase family 57 (GH57)	NA|356aa|up_3|NC_019729.1_903992_905059_+	NA	NA|79aa|up_2|NC_019729.1_905129_905366_+	NA	NA|150aa|up_1|NC_019729.1_905482_905932_+	NA	NA|392aa|up_0|NC_019729.1_906001_907177_+	NA	NA|443aa|down_0|NC_019729.1_908574_909903_+	pfam04932, Wzy_C, O-Antigen ligase	NA|100aa|down_1|NC_019729.1_909924_910224_-	NA	NA|204aa|down_2|NC_019729.1_910273_910885_-	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)	NA|173aa|down_3|NC_019729.1_911201_911720_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|168aa|down_4|NC_019729.1_912387_912891_+	NA	NA|147aa|down_5|NC_019729.1_912999_913440_+	pfam07415, Herpes_LMP2, Gammaherpesvirus latent membrane protein (LMP2) protein	NA|394aa|down_6|NC_019729.1_914812_915994_+	pfam01996, F420_ligase, F420-0:Gamma-glutamyl ligase	NA|444aa|down_7|NC_019729.1_916185_917517_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|153aa|down_8|NC_019729.1_917779_918238_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|193aa|down_9|NC_019729.1_918551_919130_+	pfam12527, DUF3727, Protein of unknown function (DUF3727)
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	12	984953-985044	12	CRISPRCasFinder	no	csm3gr7,csx19,csx10gr5	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type III-D	GACTTTTGCTATGAGACGGGGGTTTCAACCCC	32	0	0	NA	NA	NA	1	1	TypeIII-D	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|160aa|up_2|NC_019729.1_979860_980340_+,NA|59aa|down_0|NC_019729.1_989777_989954_+,NA|59aa|down_1|NC_019729.1_989883_990060_+,NA|242aa|down_4|NC_019729.1_992431_993157_+,NA|50aa|down_9|NC_019729.1_996936_997086_-	NA|114aa|up_9|NC_019729.1_969251_969593_+	pfam18480, DUF5615, Domain of unknown function (DUF5615)	NA|871aa|up_8|NC_019729.1_969693_972306_+	pfam03068, PAD, Protein-arginine deiminase (PAD)	NA|192aa|up_7|NC_019729.1_972458_973034_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|164aa|up_6|NC_019729.1_973039_973531_-	pfam13565, HTH_32, Homeodomain-like domain	NA|306aa|up_5|NC_019729.1_973779_974697_+	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|992aa|up_4|NC_019729.1_974781_977757_+	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA	NA|558aa|up_3|NC_019729.1_978010_979684_+	COG5305, COG5305, Predicted membrane protein [Function unknown]	NA|160aa|up_2|NC_019729.1_979860_980340_+	NA	NA|682aa|up_1|NC_019729.1_980618_982664_-	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins	NA|350aa|up_0|NC_019729.1_983049_984099_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]	NA|59aa|down_0|NC_019729.1_989777_989954_+	NA	NA|59aa|down_1|NC_019729.1_989883_990060_+	NA	NA|219aa|down_2|NC_019729.1_990168_990825_+	pfam06693, DUF1190, Protein of unknown function (DUF1190)	NA|436aa|down_3|NC_019729.1_991105_992413_+	COG0754, Gsp, Glutathionylspermidine synthase [Amino acid transport and metabolism]	NA|242aa|down_4|NC_019729.1_992431_993157_+	NA	NA|250aa|down_5|NC_019729.1_993317_994067_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|487aa|down_6|NC_019729.1_994032_995493_-	cd13628, PBP2_Ala, Periplasmic substrate binding domain of ABC-type transporter specific to alanine; the type 2 periplasmic binding protein	NA|120aa|down_7|NC_019729.1_995749_996109_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|178aa|down_8|NC_019729.1_996161_996695_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|50aa|down_9|NC_019729.1_996936_997086_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	13	1071872-1072165	3	CRT	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CNNTNCCANNNNNNNNTCACAGGCAAGATGCCTGTGCCACAA	42	2	7	1072038-1072062|1072038-1072062|1072038-1072062|1072038-1072062|1072038-1072062|1072038-1072062|1072105-1072123	NC_019729.1_2069119-2069095|NC_019729.1_2069154-2069130|NC_019729.1_1072166-1072190|NC_019729.1_5794919-5794943|NC_019729.1_6540640-6540616|NC_019729.1_1619865-1619889|NC_019729.1_7158302-7158320	NA	4	4	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|86aa|up_9|NC_019729.1_1055736_1055994_+,NA	NA|86aa|up_9|NC_019729.1_1055736_1055994_+	NA	NA|492aa|up_8|NC_019729.1_1056042_1057518_-	PRK00654, glgA, glycogen synthase GlgA	NA|986aa|up_7|NC_019729.1_1058997_1061955_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|193aa|up_6|NC_019729.1_1062688_1063267_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|346aa|up_5|NC_019729.1_1063619_1064657_+	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily	NA|629aa|up_4|NC_019729.1_1064828_1066715_+	pfam09818, ABC_ATPase, Predicted ATPase of the ABC class	NA|787aa|up_3|NC_019729.1_1066790_1069151_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|164aa|up_2|NC_019729.1_1069210_1069702_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|150aa|up_1|NC_019729.1_1069698_1070148_+	COG2947, COG2947, Uncharacterized conserved protein [Function unknown]	NA|134aa|up_0|NC_019729.1_1071433_1071835_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|347aa|down_0|NC_019729.1_1072215_1073256_-	PRK00292, glk, glucokinase; Provisional	NA|687aa|down_1|NC_019729.1_1073464_1075525_-	pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase	NA|608aa|down_2|NC_019729.1_1075841_1077665_+	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|932aa|down_3|NC_019729.1_1077899_1080695_+	COG3280, TreY, Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism]	NA|83aa|down_4|NC_019729.1_1080838_1081087_+	pfam08681, DUF1778, Protein of unknown function (DUF1778)	NA|182aa|down_5|NC_019729.1_1081093_1081639_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|638aa|down_6|NC_019729.1_1082052_1083966_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|171aa|down_7|NC_019729.1_1084164_1084677_+	pfam13430, DUF4112, Domain of unknown function (DUF4112)	NA|448aa|down_8|NC_019729.1_1084771_1086115_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|203aa|down_9|NC_019729.1_1086348_1086957_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	14	1087305-1087416	13	CRISPRCasFinder	no	PD-DExK	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	GATGCAGACAGCGATCGACCGCAGGATT	28	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|343aa|down_1|NC_019729.1_1092791_1093820_+,NA|83aa|down_2|NC_019729.1_1093880_1094129_-,NA|66aa|down_4|NC_019729.1_1095555_1095753_-	NA|347aa|up_9|NC_019729.1_1072215_1073256_-	PRK00292, glk, glucokinase; Provisional	NA|687aa|up_8|NC_019729.1_1073464_1075525_-	pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase	NA|608aa|up_7|NC_019729.1_1075841_1077665_+	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|932aa|up_6|NC_019729.1_1077899_1080695_+	COG3280, TreY, Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism]	NA|83aa|up_5|NC_019729.1_1080838_1081087_+	pfam08681, DUF1778, Protein of unknown function (DUF1778)	NA|182aa|up_4|NC_019729.1_1081093_1081639_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|638aa|up_3|NC_019729.1_1082052_1083966_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|171aa|up_2|NC_019729.1_1084164_1084677_+	pfam13430, DUF4112, Domain of unknown function (DUF4112)	NA|448aa|up_1|NC_019729.1_1084771_1086115_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|203aa|up_0|NC_019729.1_1086348_1086957_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|1069aa|down_0|NC_019729.1_1089290_1092497_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|343aa|down_1|NC_019729.1_1092791_1093820_+	NA	NA|83aa|down_2|NC_019729.1_1093880_1094129_-	NA	NA|273aa|down_3|NC_019729.1_1094504_1095323_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|66aa|down_4|NC_019729.1_1095555_1095753_-	NA	NA|231aa|down_5|NC_019729.1_1095817_1096510_+	PRK14983, PRK14983, aldehyde decarbonylase; Provisional	NA|342aa|down_6|NC_019729.1_1096666_1097692_+	PRK14982, PRK14982, acyl-ACP reductase; Provisional	NA|327aa|down_7|NC_019729.1_1097948_1098929_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|242aa|down_8|NC_019729.1_1099173_1099899_+	PRK07454, PRK07454, SDR family oxidoreductase	NA|245aa|down_9|NC_019729.1_1100002_1100737_+	PRK09347, folE, GTP cyclohydrolase I; Provisional
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	15	1286014-1286840	5,14,4	PILER-CR,CRISPRCasFinder,CRT	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAAC,GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAAC,GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAAC	37,37,37	0	0	NA	NA	I-D,II-B:I-D,II-B:I-D,II-B	10,10,11	11	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|80aa|up_7|NC_019729.1_1276691_1276931_-,NA|224aa|up_3|NC_019729.1_1279625_1280297_+,NA|231aa|up_2|NC_019729.1_1280446_1281139_+,NA	NA|80aa|up_9|NC_019729.1_1272473_1272713_+	PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional	NA|1104aa|up_8|NC_019729.1_1273307_1276619_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|80aa|up_7|NC_019729.1_1276691_1276931_-	NA	NA|201aa|up_6|NC_019729.1_1276983_1277586_-	pfam05685, Uma2, Putative restriction endonuclease	NA|221aa|up_5|NC_019729.1_1277832_1278495_+	COG4245, TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain [General function prediction only]	NA|256aa|up_4|NC_019729.1_1278681_1279449_+	pfam13672, PP2C_2, Protein phosphatase 2C	NA|224aa|up_3|NC_019729.1_1279625_1280297_+	NA	NA|231aa|up_2|NC_019729.1_1280446_1281139_+	NA	NA|589aa|up_1|NC_019729.1_1281490_1283257_+	smart00535, RIBOc, Ribonuclease III family	NA|706aa|up_0|NC_019729.1_1283617_1285735_+	COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]	NA|176aa|down_0|NC_019729.1_1287233_1287761_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|371aa|down_1|NC_019729.1_1288056_1289169_-	COG2082, CobH, Precorrin isomerase [Coenzyme metabolism]	NA|638aa|down_2|NC_019729.1_1290061_1291975_+	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron	NA|689aa|down_3|NC_019729.1_1292273_1294340_+	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|246aa|down_4|NC_019729.1_1294398_1295136_-	cd06260, DUF820, Domain of unknown function (DUF820)	NA|365aa|down_5|NC_019729.1_1295622_1296717_-	cd02035, ArsA, Arsenical pump-driving ATPase ArsA	NA|67aa|down_6|NC_019729.1_1296902_1297103_-	pfam11061, DUF2862, Protein of unknown function (DUF2862)	NA|369aa|down_7|NC_019729.1_1297773_1298880_+	pfam04773, FecR, FecR protein	NA|605aa|down_8|NC_019729.1_1299303_1301118_+	cd07302, CHD, cyclase homology domain	NA|309aa|down_9|NC_019729.1_1301481_1302408_-	PRK00971, PRK00971, glutaminase; Provisional
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	16	1286929-1287037	15	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAAC	37	0	0	NA	NA	I-D,II-B	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|80aa|up_7|NC_019729.1_1276691_1276931_-,NA|224aa|up_3|NC_019729.1_1279625_1280297_+,NA|231aa|up_2|NC_019729.1_1280446_1281139_+,NA	NA|80aa|up_9|NC_019729.1_1272473_1272713_+	PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional	NA|1104aa|up_8|NC_019729.1_1273307_1276619_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|80aa|up_7|NC_019729.1_1276691_1276931_-	NA	NA|201aa|up_6|NC_019729.1_1276983_1277586_-	pfam05685, Uma2, Putative restriction endonuclease	NA|221aa|up_5|NC_019729.1_1277832_1278495_+	COG4245, TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain [General function prediction only]	NA|256aa|up_4|NC_019729.1_1278681_1279449_+	pfam13672, PP2C_2, Protein phosphatase 2C	NA|224aa|up_3|NC_019729.1_1279625_1280297_+	NA	NA|231aa|up_2|NC_019729.1_1280446_1281139_+	NA	NA|589aa|up_1|NC_019729.1_1281490_1283257_+	smart00535, RIBOc, Ribonuclease III family	NA|706aa|up_0|NC_019729.1_1283617_1285735_+	COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]	NA|176aa|down_0|NC_019729.1_1287233_1287761_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|371aa|down_1|NC_019729.1_1288056_1289169_-	COG2082, CobH, Precorrin isomerase [Coenzyme metabolism]	NA|638aa|down_2|NC_019729.1_1290061_1291975_+	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron	NA|689aa|down_3|NC_019729.1_1292273_1294340_+	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|246aa|down_4|NC_019729.1_1294398_1295136_-	cd06260, DUF820, Domain of unknown function (DUF820)	NA|365aa|down_5|NC_019729.1_1295622_1296717_-	cd02035, ArsA, Arsenical pump-driving ATPase ArsA	NA|67aa|down_6|NC_019729.1_1296902_1297103_-	pfam11061, DUF2862, Protein of unknown function (DUF2862)	NA|369aa|down_7|NC_019729.1_1297773_1298880_+	pfam04773, FecR, FecR protein	NA|605aa|down_8|NC_019729.1_1299303_1301118_+	cd07302, CHD, cyclase homology domain	NA|309aa|down_9|NC_019729.1_1301481_1302408_-	PRK00971, PRK00971, glutaminase; Provisional
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	17	1416380-1416485	16	CRISPRCasFinder	no	csa3	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-A	TTGCCGCCTCACTCCTAGCATCAA	24	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|85aa|down_6|NC_019729.1_1424380_1424635_-	csa3|114aa|up_9|NC_019729.1_1405540_1405882_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|235aa|up_8|NC_019729.1_1405986_1406691_+	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|223aa|up_7|NC_019729.1_1406698_1407367_+	TIGR02690, arsenical_resistance_protein_ArsH_putative, arsenical resistance protein ArsH	NA|356aa|up_6|NC_019729.1_1407403_1408471_+	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein	NA|132aa|up_5|NC_019729.1_1408514_1408910_+	TIGR02689, arsenate_reductase, arsenate reductase, glutathione/glutaredoxin type	NA|329aa|up_4|NC_019729.1_1409410_1410397_+	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein	NA|242aa|up_3|NC_019729.1_1410496_1411222_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|855aa|up_2|NC_019729.1_1411517_1414082_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|300aa|up_1|NC_019729.1_1414337_1415237_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|243aa|up_0|NC_019729.1_1415360_1416089_+	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|439aa|down_0|NC_019729.1_1417104_1418421_+	pfam13433, Peripla_BP_5, Periplasmic binding protein domain	NA|385aa|down_1|NC_019729.1_1418858_1420013_+	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|381aa|down_2|NC_019729.1_1420040_1421183_+	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|241aa|down_3|NC_019729.1_1421369_1422092_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|249aa|down_4|NC_019729.1_1422281_1423028_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|233aa|down_5|NC_019729.1_1423240_1423939_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|85aa|down_6|NC_019729.1_1424380_1424635_-	NA	NA|241aa|down_7|NC_019729.1_1424651_1425374_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|159aa|down_8|NC_019729.1_1425440_1425917_-	pfam01584, CheW, CheW-like domain	NA|937aa|down_9|NC_019729.1_1426300_1429111_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	18	1422148-1422262	17	CRISPRCasFinder	no	csa3	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-A	GGCTTACCCAGAGACTGTTAACTGACGCACC	31	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|52aa|up_4|NC_019729.1_1416298_1416454_-,NA|85aa|down_2|NC_019729.1_1424380_1424635_-,NA|63aa|down_9|NC_019729.1_1437252_1437441_-	NA|329aa|up_9|NC_019729.1_1409410_1410397_+	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein	NA|242aa|up_8|NC_019729.1_1410496_1411222_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|855aa|up_7|NC_019729.1_1411517_1414082_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|300aa|up_6|NC_019729.1_1414337_1415237_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|243aa|up_5|NC_019729.1_1415360_1416089_+	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|52aa|up_4|NC_019729.1_1416298_1416454_-	NA	NA|439aa|up_3|NC_019729.1_1417104_1418421_+	pfam13433, Peripla_BP_5, Periplasmic binding protein domain	NA|385aa|up_2|NC_019729.1_1418858_1420013_+	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|381aa|up_1|NC_019729.1_1420040_1421183_+	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|241aa|up_0|NC_019729.1_1421369_1422092_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|249aa|down_0|NC_019729.1_1422281_1423028_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|233aa|down_1|NC_019729.1_1423240_1423939_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|85aa|down_2|NC_019729.1_1424380_1424635_-	NA	NA|241aa|down_3|NC_019729.1_1424651_1425374_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|159aa|down_4|NC_019729.1_1425440_1425917_-	pfam01584, CheW, CheW-like domain	NA|937aa|down_5|NC_019729.1_1426300_1429111_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|1935aa|down_6|NC_019729.1_1429425_1435230_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|168aa|down_7|NC_019729.1_1435308_1435812_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|122aa|down_8|NC_019729.1_1436069_1436435_-	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains	NA|63aa|down_9|NC_019729.1_1437252_1437441_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	19	1581001-1581083	18	CRISPRCasFinder	no	csa3	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-A	TAGAGTCCATCTGAAATCTAAAATCT	26	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA	NA|559aa|up_9|NC_019729.1_1560350_1562027_+	pfam05552, TM_helix, Conserved TM helix	NA|1818aa|up_8|NC_019729.1_1562441_1567895_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|75aa|up_7|NC_019729.1_1570403_1570628_-	pfam13619, KTSC, KTSC domain	NA|197aa|up_6|NC_019729.1_1570787_1571378_+	pfam06206, CpeT, CpeT/CpcT family (DUF1001)	NA|383aa|up_5|NC_019729.1_1571489_1572638_+	PLN02572, PLN02572, UDP-sulfoquinovose synthase	NA|213aa|up_4|NC_019729.1_1573188_1573827_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)	NA|378aa|up_3|NC_019729.1_1573840_1574974_+	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	NA|886aa|up_2|NC_019729.1_1575561_1578219_+	cd07302, CHD, cyclase homology domain	NA|381aa|up_1|NC_019729.1_1578370_1579513_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|277aa|up_0|NC_019729.1_1579663_1580494_+	cd16383, GUN4, porphyrin-binding protein domain GUN4	NA|197aa|down_0|NC_019729.1_1581213_1581804_+	cd06259, YdcF-like, YdcF-like	NA|180aa|down_1|NC_019729.1_1581974_1582514_+	smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases	NA|213aa|down_2|NC_019729.1_1582626_1583265_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|294aa|down_3|NC_019729.1_1584014_1584896_-	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase	NA|334aa|down_4|NC_019729.1_1585436_1586438_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|350aa|down_5|NC_019729.1_1586597_1587647_-	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|445aa|down_6|NC_019729.1_1587998_1589333_+	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane]	NA|95aa|down_7|NC_019729.1_1589414_1589699_+	CHL00005, rps16, ribosomal protein S16	NA|174aa|down_8|NC_019729.1_1589637_1590159_+	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only]	NA|318aa|down_9|NC_019729.1_1590533_1591487_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	20	1600478-1600645	19	CRISPRCasFinder	no	csa3,Cas14c_CAS-V-F	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-A	ACGGCGATTGAAATCGCTTTTACACAAACAAAGCCCGCC	39	0	0	NA	NA	NA	1	1	TypeV,TypeI-A	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|259aa|up_8|NC_019729.1_1592265_1593042_+,NA|261aa|up_6|NC_019729.1_1594624_1595407_+,NA|105aa|down_0|NC_019729.1_1600712_1601027_+,NA|215aa|down_2|NC_019729.1_1602239_1602884_-,NA|135aa|down_4|NC_019729.1_1604594_1604999_-,NA|215aa|down_6|NC_019729.1_1607183_1607828_+,NA|207aa|down_9|NC_019729.1_1610232_1610853_-	NA|135aa|up_9|NC_019729.1_1591606_1592011_+	cd16827, ChuX-like, heme utilization protein ChuX and similar proteins	NA|259aa|up_8|NC_019729.1_1592265_1593042_+	NA	NA|361aa|up_7|NC_019729.1_1593366_1594449_+	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B))	NA|261aa|up_6|NC_019729.1_1594624_1595407_+	NA	NA|161aa|up_5|NC_019729.1_1595408_1595891_+	cd18744, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|257aa|up_4|NC_019729.1_1596153_1596924_+	COG5401, COG5401, Spore germination protein [General function prediction only]	csa3|118aa|up_3|NC_019729.1_1597053_1597407_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|186aa|up_2|NC_019729.1_1597476_1598034_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|186aa|up_1|NC_019729.1_1598234_1598792_-	PRK00529, PRK00529, elongation factor P; Validated	NA|375aa|up_0|NC_019729.1_1599346_1600471_+	cd01924, cyclophilin_TLP40_like, cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40	NA|105aa|down_0|NC_019729.1_1600712_1601027_+	NA	NA|377aa|down_1|NC_019729.1_1601059_1602190_+	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional	NA|215aa|down_2|NC_019729.1_1602239_1602884_-	NA	NA|397aa|down_3|NC_019729.1_1603265_1604456_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|135aa|down_4|NC_019729.1_1604594_1604999_-	NA	NA|555aa|down_5|NC_019729.1_1605190_1606855_+	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium	NA|215aa|down_6|NC_019729.1_1607183_1607828_+	NA	NA|367aa|down_7|NC_019729.1_1607962_1609063_-	TIGR00378, cax, calcium/proton exchanger (cax)	NA|250aa|down_8|NC_019729.1_1609257_1610007_+	pfam05685, Uma2, Putative restriction endonuclease	NA|207aa|down_9|NC_019729.1_1610232_1610853_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	21	2103445-2103566	20	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	TTCTTAACTCCCCCCCTTTACAA	23	0	0	NA	NA	NA	2	2	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|127aa|up_8|NC_019729.1_2090589_2090970_+,NA|462aa|up_4|NC_019729.1_2096265_2097651_-,NA|53aa|up_2|NC_019729.1_2100597_2100756_-,NA|108aa|down_4|NC_019729.1_2109672_2109996_+,NA|144aa|down_6|NC_019729.1_2110896_2111328_-	NA|323aa|up_9|NC_019729.1_2089483_2090452_+	PRK13022, secF, protein translocase subunit SecF	NA|127aa|up_8|NC_019729.1_2090589_2090970_+	NA	NA|495aa|up_7|NC_019729.1_2091190_2092675_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|133aa|up_6|NC_019729.1_2094105_2094504_+	pfam14242, DUF4342, Domain of unknown function (DUF4342)	NA|281aa|up_5|NC_019729.1_2095206_2096049_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|462aa|up_4|NC_019729.1_2096265_2097651_-	NA	NA|510aa|up_3|NC_019729.1_2099009_2100539_-	TIGR00368, Uncharacterized_protein_YifB, Mg chelatase-related protein	NA|53aa|up_2|NC_019729.1_2100597_2100756_-	NA	NA|116aa|up_1|NC_019729.1_2100812_2101160_+	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|361aa|up_0|NC_019729.1_2101710_2102793_+	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B))	NA|302aa|down_0|NC_019729.1_2105090_2105996_-	COG3781, COG3781, Predicted membrane protein [Function unknown]	NA|707aa|down_1|NC_019729.1_2106370_2108491_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|47aa|down_2|NC_019729.1_2108612_2108753_-	PRK13686, PRK13686, photosystem II reaction center protein Ycf12	NA|125aa|down_3|NC_019729.1_2109103_2109478_+	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|108aa|down_4|NC_019729.1_2109672_2109996_+	NA	NA|96aa|down_5|NC_019729.1_2110260_2110548_+	pfam02325, YGGT, YGGT family	NA|144aa|down_6|NC_019729.1_2110896_2111328_-	NA	NA|324aa|down_7|NC_019729.1_2111435_2112407_-	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|455aa|down_8|NC_019729.1_2112523_2113888_-	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|227aa|down_9|NC_019729.1_2114481_2115162_-	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	22	2165469-2165598	21	CRISPRCasFinder	no	Cas14c_CAS-V-F,cas14j	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	CCTGCCTCATAGCAAAAGTCGGTTGAAACCGACTCAAGAGTTTGAAG	47	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|226aa|up_9|NC_019729.1_2154271_2154949_-,NA|182aa|up_5|NC_019729.1_2158492_2159038_+,NA|293aa|up_3|NC_019729.1_2160210_2161089_+,NA|151aa|down_3|NC_019729.1_2169627_2170080_-	NA|226aa|up_9|NC_019729.1_2154271_2154949_-	NA	NA|223aa|up_8|NC_019729.1_2155127_2155796_-	TIGR04153, hypothetical_protein_L8106_04486, cyanosortase A-associated protein	NA|284aa|up_7|NC_019729.1_2155795_2156647_-	TIGR03763, conserved_hypothetical_protein, cyanoexosortase A	NA|369aa|up_6|NC_019729.1_2157028_2158135_-	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|182aa|up_5|NC_019729.1_2158492_2159038_+	NA	NA|202aa|up_4|NC_019729.1_2159504_2160110_+	pfam07466, DUF1517, Protein of unknown function (DUF1517)	NA|293aa|up_3|NC_019729.1_2160210_2161089_+	NA	NA|353aa|up_2|NC_019729.1_2161268_2162327_+	pfam00395, SLH, S-layer homology domain	NA|527aa|up_1|NC_019729.1_2162422_2164003_-	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|401aa|up_0|NC_019729.1_2164240_2165443_+	PRK00053, alr, alanine racemase; Reviewed	NA|283aa|down_0|NC_019729.1_2165740_2166589_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|380aa|down_1|NC_019729.1_2166636_2167776_+	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2	NA|409aa|down_2|NC_019729.1_2168063_2169290_-	cd11301, Fut1_Fut2_like, Alpha-1,2-fucosyltransferase	NA|151aa|down_3|NC_019729.1_2169627_2170080_-	NA	Cas14c_CAS-V-F|404aa|down_4|NC_019729.1_2170545_2171757_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas14j|468aa|down_5|NC_019729.1_2172017_2173421_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|138aa|down_6|NC_019729.1_2173466_2173880_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|313aa|down_7|NC_019729.1_2174020_2174959_-	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|335aa|down_8|NC_019729.1_2175981_2176986_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|391aa|down_9|NC_019729.1_2177111_2178284_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	23	2190714-2190808	22	CRISPRCasFinder	no	cas14j	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	AACAGTGACATAACTATCTTTCCGAT	26	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|223aa|up_7|NC_019729.1_2178380_2179049_+,NA|407aa|up_5|NC_019729.1_2181014_2182235_+,NA|275aa|up_4|NC_019729.1_2182550_2183375_+,NA|404aa|up_3|NC_019729.1_2183645_2184857_+,NA|213aa|up_2|NC_019729.1_2187057_2187696_+,NA|367aa|up_1|NC_019729.1_2187776_2188877_+,NA|166aa|up_0|NC_019729.1_2190158_2190656_+,NA|77aa|down_7|NC_019729.1_2205434_2205665_-	NA|335aa|up_9|NC_019729.1_2175981_2176986_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|391aa|up_8|NC_019729.1_2177111_2178284_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|223aa|up_7|NC_019729.1_2178380_2179049_+	NA	NA|441aa|up_6|NC_019729.1_2179264_2180587_+	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown]	NA|407aa|up_5|NC_019729.1_2181014_2182235_+	NA	NA|275aa|up_4|NC_019729.1_2182550_2183375_+	NA	NA|404aa|up_3|NC_019729.1_2183645_2184857_+	NA	NA|213aa|up_2|NC_019729.1_2187057_2187696_+	NA	NA|367aa|up_1|NC_019729.1_2187776_2188877_+	NA	NA|166aa|up_0|NC_019729.1_2190158_2190656_+	NA	NA|384aa|down_0|NC_019729.1_2192395_2193547_+	pfam12617, LdpA_C, Iron-Sulfur binding protein C terminal	NA|589aa|down_1|NC_019729.1_2193717_2195484_+	COG3854, SpoIIIAA, ncharacterized protein conserved in bacteria [Function unknown]	NA|559aa|down_2|NC_019729.1_2195873_2197550_+	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|377aa|down_3|NC_019729.1_2197553_2198684_+	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea	NA|487aa|down_4|NC_019729.1_2199113_2200574_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|628aa|down_5|NC_019729.1_2200901_2202785_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|832aa|down_6|NC_019729.1_2202889_2205385_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|77aa|down_7|NC_019729.1_2205434_2205665_-	NA	NA|362aa|down_8|NC_019729.1_2205679_2206765_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|129aa|down_9|NC_019729.1_2206913_2207300_-	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	24	2390640-2390768	23	CRISPRCasFinder	no	c2c9_V-U4,Cas14c_CAS-V-F	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	CCTACTCCCCACAAAAAAATTGAACTATAAGTGGAACAG	39	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|87aa|up_7|NC_019729.1_2383539_2383800_-,NA|69aa|down_5|NC_019729.1_2397658_2397865_+,NA|157aa|down_6|NC_019729.1_2397906_2398377_-	NA|223aa|up_9|NC_019729.1_2381428_2382097_-	pfam05685, Uma2, Putative restriction endonuclease	c2c9_V-U4|381aa|up_8|NC_019729.1_2382234_2383377_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|87aa|up_7|NC_019729.1_2383539_2383800_-	NA	NA|80aa|up_6|NC_019729.1_2383964_2384204_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|195aa|up_5|NC_019729.1_2384321_2384906_-	pfam04755, PAP_fibrillin, PAP_fibrillin	NA|559aa|up_4|NC_019729.1_2385064_2386741_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|80aa|up_3|NC_019729.1_2387151_2387391_+	pfam11332, DUF3134, Protein of unknown function (DUF3134)	NA|372aa|up_2|NC_019729.1_2387521_2388637_+	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|236aa|up_1|NC_019729.1_2388812_2389520_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|336aa|up_0|NC_019729.1_2389586_2390594_+	TIGR03965, glycosyltransferase_Rv0696_family, mycofactocin system glycosyltransferase	NA|620aa|down_0|NC_019729.1_2391093_2392953_+	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated	NA|240aa|down_1|NC_019729.1_2393057_2393777_+	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|505aa|down_2|NC_019729.1_2393881_2395396_+	PRK07363, PRK07363, NADH-quinone oxidoreductase subunit M	NA|129aa|down_3|NC_019729.1_2395590_2395977_+	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein	NA|441aa|down_4|NC_019729.1_2396079_2397402_+	pfam10216, ChpXY, CO2 hydration protein (ChpXY)	NA|69aa|down_5|NC_019729.1_2397658_2397865_+	NA	NA|157aa|down_6|NC_019729.1_2397906_2398377_-	NA	NA|73aa|down_7|NC_019729.1_2398508_2398727_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	Cas14c_CAS-V-F|404aa|down_8|NC_019729.1_2399082_2400294_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|71aa|down_9|NC_019729.1_2400647_2400860_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	25	2496251-2496370	24	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GACTTGTAGGGTGCGTCAGGCGAAGTTCTCTAACG	35	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|158aa|down_0|NC_019729.1_2496435_2496909_+,NA|215aa|down_7|NC_019729.1_2503796_2504441_-,NA|210aa|down_8|NC_019729.1_2504593_2505223_+	NA|1460aa|up_9|NC_019729.1_2476442_2480822_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|1561aa|up_8|NC_019729.1_2481264_2485947_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)	NA|231aa|up_7|NC_019729.1_2486148_2486841_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|367aa|up_6|NC_019729.1_2486837_2487938_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|599aa|up_5|NC_019729.1_2488238_2490035_+	pfam03814, KdpA, Potassium-transporting ATPase A subunit	NA|698aa|up_4|NC_019729.1_2490150_2492244_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|90aa|up_3|NC_019729.1_2492401_2492671_+	pfam09604, Potass_KdpF, F subunit of K+-transporting ATPase (Potass_KdpF)	NA|210aa|up_2|NC_019729.1_2492712_2493342_+	PRK14003, PRK14003, K(+)-transporting ATPase subunit C	NA|384aa|up_1|NC_019729.1_2493516_2494668_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|413aa|up_0|NC_019729.1_2494957_2496196_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|158aa|down_0|NC_019729.1_2496435_2496909_+	NA	NA|212aa|down_1|NC_019729.1_2497037_2497673_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|154aa|down_2|NC_019729.1_2497679_2498141_-	COG3837, COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|485aa|down_3|NC_019729.1_2498383_2499838_+	cd17484, MFS_FBT, Folate-biopterin transporter of the Major Facilitator Superfamily of transporters	NA|499aa|down_4|NC_019729.1_2499969_2501466_+	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|300aa|down_5|NC_019729.1_2501699_2502599_+	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|284aa|down_6|NC_019729.1_2502729_2503581_-	cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily	NA|215aa|down_7|NC_019729.1_2503796_2504441_-	NA	NA|210aa|down_8|NC_019729.1_2504593_2505223_+	NA	NA|120aa|down_9|NC_019729.1_2505239_2505599_+	pfam13316, DUF4087, Protein of unknown function (DUF4087)
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	26	2853086-2853177	25	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CACCCTACCACTGTGGAGTCAATCTAAAATCT	32	1	8	2853118-2853145|2853118-2853145|2853118-2853145|2853118-2853145|2853118-2853145|2853118-2853145|2853118-2853145|2853118-2853145	NC_019729.1_4273128-4273155|NC_019729.1_4882083-4882110|NC_019729.1_2917044-2917017|NC_019729.1_2949589-2949616|NC_019729.1_7191874-7191901|NC_019729.1_1437463-1437436|NC_019729.1_5786606-5786579|NC_019729.1_7049637-7049610	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|50aa|down_6|NC_019729.1_2868112_2868262_-,NA|78aa|down_9|NC_019729.1_2871777_2872011_-	NA|872aa|up_9|NC_019729.1_2838113_2840729_+	cd01031, EriC, ClC chloride channel EriC	NA|124aa|up_8|NC_019729.1_2841125_2841497_-	PRK13988, PRK13988, cell division topological specificity factor MinE; Provisional	NA|269aa|up_7|NC_019729.1_2841713_2842520_-	TIGR01968, Septum_site-determining_protein_MinD, septum site-determining protein MinD	NA|268aa|up_6|NC_019729.1_2842845_2843649_-	PRK00513, minC, septum formation inhibitor; Reviewed	NA|310aa|up_5|NC_019729.1_2843867_2844797_+	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|267aa|up_4|NC_019729.1_2844899_2845700_+	pfam00769, ERM, Ezrin/radixin/moesin family	NA|577aa|up_3|NC_019729.1_2845998_2847729_+	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional	NA|555aa|up_2|NC_019729.1_2847796_2849461_-	pfam05729, NACHT, NACHT domain	NA|656aa|up_1|NC_019729.1_2849913_2851881_-	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]	NA|286aa|up_0|NC_019729.1_2852092_2852950_-	pfam07099, DUF1361, Protein of unknown function (DUF1361)	NA|1427aa|down_0|NC_019729.1_2853211_2857492_-	COG3452, COG3452, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]	NA|456aa|down_1|NC_019729.1_2857940_2859308_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|455aa|down_2|NC_019729.1_2859570_2860935_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|441aa|down_3|NC_019729.1_2861132_2862455_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|123aa|down_4|NC_019729.1_2862524_2862893_-	pfam00072, Response_reg, Response regulator receiver domain	NA|973aa|down_5|NC_019729.1_2862910_2865829_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|50aa|down_6|NC_019729.1_2868112_2868262_-	NA	NA|391aa|down_7|NC_019729.1_2869479_2870652_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|312aa|down_8|NC_019729.1_2870718_2871654_+	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|78aa|down_9|NC_019729.1_2871777_2872011_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	27	2904685-2904786	26	CRISPRCasFinder	no	Cas14c_CAS-V-F	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	AGCCGGCAGCCGCGTGGAAGAAGT	24	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|111aa|up_8|NC_019729.1_2895378_2895711_-,NA|53aa|up_6|NC_019729.1_2898116_2898275_-,NA|205aa|up_5|NC_019729.1_2898749_2899364_+,NA|49aa|up_4|NC_019729.1_2899620_2899767_+,NA|65aa|down_4|NC_019729.1_2914174_2914369_+,NA|76aa|down_5|NC_019729.1_2914747_2914975_-,NA|113aa|down_6|NC_019729.1_2915125_2915464_-	NA|589aa|up_9|NC_019729.1_2893497_2895264_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|111aa|up_8|NC_019729.1_2895378_2895711_-	NA	NA|523aa|up_7|NC_019729.1_2896231_2897800_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|53aa|up_6|NC_019729.1_2898116_2898275_-	NA	NA|205aa|up_5|NC_019729.1_2898749_2899364_+	NA	NA|49aa|up_4|NC_019729.1_2899620_2899767_+	NA	NA|553aa|up_3|NC_019729.1_2899876_2901535_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|184aa|up_2|NC_019729.1_2901600_2902152_+	cd02021, GntK, Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate	NA|337aa|up_1|NC_019729.1_2902161_2903172_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|137aa|up_0|NC_019729.1_2903183_2903594_-	TIGR02865, Stage_II_sporulation_protein_E, stage II sporulation protein E	NA|406aa|down_0|NC_019729.1_2906208_2907426_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|407aa|down_1|NC_019729.1_2907643_2908864_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|574aa|down_2|NC_019729.1_2909185_2910907_+	cd03398, PAP2_haloperoxidase, PAP2, haloperoxidase_like subfamily	NA|980aa|down_3|NC_019729.1_2911097_2914037_-	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	NA|65aa|down_4|NC_019729.1_2914174_2914369_+	NA	NA|76aa|down_5|NC_019729.1_2914747_2914975_-	NA	NA|113aa|down_6|NC_019729.1_2915125_2915464_-	NA	NA|246aa|down_7|NC_019729.1_2916069_2916807_-	pfam11209, DUF2993, Protein of unknown function (DUF2993)	NA|471aa|down_8|NC_019729.1_2917309_2918722_+	COG4250, COG4250, Predicted sensor protein/domain [Signal transduction mechanisms]	Cas14c_CAS-V-F|404aa|down_9|NC_019729.1_2918738_2919950_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	28	3028538-3028647	27	CRISPRCasFinder	no	2OG_CAS	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AACCGGGTTTCTTCCGATATTTCTCGT	27	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|76aa|up_8|NC_019729.1_3021175_3021403_-,NA|333aa|up_7|NC_019729.1_3021344_3022343_-,NA|141aa|up_1|NC_019729.1_3027222_3027645_+,NA	NA|1183aa|up_9|NC_019729.1_3016976_3020525_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|76aa|up_8|NC_019729.1_3021175_3021403_-	NA	NA|333aa|up_7|NC_019729.1_3021344_3022343_-	NA	NA|129aa|up_6|NC_019729.1_3022914_3023301_+	pfam01381, HTH_3, Helix-turn-helix	NA|90aa|up_5|NC_019729.1_3023615_3023885_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|138aa|up_4|NC_019729.1_3023923_3024337_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|160aa|up_3|NC_019729.1_3024409_3024889_-	pfam04471, Mrr_cat, Restriction endonuclease	NA|485aa|up_2|NC_019729.1_3025474_3026929_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|141aa|up_1|NC_019729.1_3027222_3027645_+	NA	NA|199aa|up_0|NC_019729.1_3027858_3028455_-	pfam05685, Uma2, Putative restriction endonuclease	NA|632aa|down_0|NC_019729.1_3028930_3030826_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|1493aa|down_1|NC_019729.1_3030871_3035350_-	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|203aa|down_2|NC_019729.1_3035580_3036189_-	pfam05685, Uma2, Putative restriction endonuclease	NA|786aa|down_3|NC_019729.1_3036337_3038695_-	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|264aa|down_4|NC_019729.1_3039018_3039810_-	pfam11251, DUF3050, Protein of unknown function (DUF3050)	2OG_CAS|201aa|down_5|NC_019729.1_3040690_3041293_+	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily	NA|431aa|down_6|NC_019729.1_3041539_3042832_+	COG4637, COG4637, Predicted ATPase [General function prediction only]	NA|220aa|down_7|NC_019729.1_3042836_3043496_+	pfam14103, DUF4276, Domain of unknown function (DUF4276)	NA|425aa|down_8|NC_019729.1_3043855_3045130_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|725aa|down_9|NC_019729.1_3045920_3048095_+	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	29	3071965-3072033	28	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CCCTTGCTAAGGGGGGGCTTTTGA	24	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|93aa|up_6|NC_019729.1_3065632_3065911_-,NA|97aa|down_2|NC_019729.1_3076452_3076743_-,NA|125aa|down_3|NC_019729.1_3076974_3077349_+	NA|226aa|up_9|NC_019729.1_3061929_3062607_-	pfam09601, DUF2459, Protein of unknown function (DUF2459)	NA|401aa|up_8|NC_019729.1_3062621_3063824_-	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown]	NA|380aa|up_7|NC_019729.1_3064197_3065337_-	cd19588, serpin_miropin-like, serpin miropin and similar proteins	NA|93aa|up_6|NC_019729.1_3065632_3065911_-	NA	NA|257aa|up_5|NC_019729.1_3066122_3066893_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|151aa|up_4|NC_019729.1_3067013_3067466_+	cd06987, cupin_MAE_RS03005, Microcystis aeruginosa MAE_RS03005 and related proteins, cupin domain	NA|116aa|up_3|NC_019729.1_3067587_3067935_+	COG3502, COG3502, Uncharacterized protein conserved in bacteria [Function unknown]	NA|416aa|up_2|NC_019729.1_3068158_3069406_-	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]	NA|83aa|up_1|NC_019729.1_3069514_3069763_+	pfam10718, Ycf34, Hypothetical chloroplast protein Ycf34	NA|571aa|up_0|NC_019729.1_3069897_3071610_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|88aa|down_0|NC_019729.1_3072644_3072908_-	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]	NA|1140aa|down_1|NC_019729.1_3073058_3076478_+	pfam12770, CHAT, CHAT domain	NA|97aa|down_2|NC_019729.1_3076452_3076743_-	NA	NA|125aa|down_3|NC_019729.1_3076974_3077349_+	NA	NA|274aa|down_4|NC_019729.1_3077461_3078283_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|478aa|down_5|NC_019729.1_3078996_3080430_-	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|338aa|down_6|NC_019729.1_3080624_3081638_+	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|253aa|down_7|NC_019729.1_3081721_3082480_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|334aa|down_8|NC_019729.1_3082701_3083703_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|602aa|down_9|NC_019729.1_3083781_3085587_+	TIGR02891, Probable_cytochrome_c_oxidase_subunit_1-beta, cytochrome c oxidase, subunit I
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	30	3078640-3078734	29	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GCCTGTGTAGCCGCGAATTTATTCGCCGGG	30	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|97aa|up_2|NC_019729.1_3076452_3076743_-,NA|125aa|up_1|NC_019729.1_3076974_3077349_+,NA|96aa|down_6|NC_019729.1_3086501_3086789_+,NA|411aa|down_7|NC_019729.1_3086954_3088187_+	NA|116aa|up_9|NC_019729.1_3067587_3067935_+	COG3502, COG3502, Uncharacterized protein conserved in bacteria [Function unknown]	NA|416aa|up_8|NC_019729.1_3068158_3069406_-	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]	NA|83aa|up_7|NC_019729.1_3069514_3069763_+	pfam10718, Ycf34, Hypothetical chloroplast protein Ycf34	NA|571aa|up_6|NC_019729.1_3069897_3071610_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|251aa|up_5|NC_019729.1_3071612_3072365_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|88aa|up_4|NC_019729.1_3072644_3072908_-	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]	NA|1140aa|up_3|NC_019729.1_3073058_3076478_+	pfam12770, CHAT, CHAT domain	NA|97aa|up_2|NC_019729.1_3076452_3076743_-	NA	NA|125aa|up_1|NC_019729.1_3076974_3077349_+	NA	NA|274aa|up_0|NC_019729.1_3077461_3078283_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|478aa|down_0|NC_019729.1_3078996_3080430_-	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|338aa|down_1|NC_019729.1_3080624_3081638_+	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|253aa|down_2|NC_019729.1_3081721_3082480_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|334aa|down_3|NC_019729.1_3082701_3083703_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|602aa|down_4|NC_019729.1_3083781_3085587_+	TIGR02891, Probable_cytochrome_c_oxidase_subunit_1-beta, cytochrome c oxidase, subunit I	NA|208aa|down_5|NC_019729.1_3085716_3086340_+	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]	NA|96aa|down_6|NC_019729.1_3086501_3086789_+	NA	NA|411aa|down_7|NC_019729.1_3086954_3088187_+	NA	NA|100aa|down_8|NC_019729.1_3088201_3088501_-	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|325aa|down_9|NC_019729.1_3088778_3089753_-	PRK10717, PRK10717, cysteine synthase A; Provisional
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	31	3146932-3147063	30	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CCACATCTGCGGGTTGAAACGAAATATTTTCGTCCATCAAACCCGG	46	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|260aa|up_8|NC_019729.1_3139688_3140468_-,NA|109aa|up_6|NC_019729.1_3142031_3142358_-,NA|89aa|up_5|NC_019729.1_3142512_3142779_+,NA|94aa|up_4|NC_019729.1_3142818_3143100_+,NA|319aa|up_1|NC_019729.1_3145086_3146043_+,NA|240aa|down_3|NC_019729.1_3149171_3149891_+,NA|83aa|down_6|NC_019729.1_3151868_3152117_-,NA|125aa|down_7|NC_019729.1_3152415_3152790_-,NA|166aa|down_8|NC_019729.1_3152871_3153369_-	NA|276aa|up_9|NC_019729.1_3138827_3139655_-	pfam11236, DUF3037, Protein of unknown function (DUF3037)	NA|260aa|up_8|NC_019729.1_3139688_3140468_-	NA	NA|156aa|up_7|NC_019729.1_3141415_3141883_+	sd00006, TPR, Tetratricopeptide repeat	NA|109aa|up_6|NC_019729.1_3142031_3142358_-	NA	NA|89aa|up_5|NC_019729.1_3142512_3142779_+	NA	NA|94aa|up_4|NC_019729.1_3142818_3143100_+	NA	NA|276aa|up_3|NC_019729.1_3143556_3144384_+	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|70aa|up_2|NC_019729.1_3144581_3144791_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|319aa|up_1|NC_019729.1_3145086_3146043_+	NA	NA|285aa|up_0|NC_019729.1_3146042_3146897_+	pfam08852, DUF1822, Protein of unknown function (DUF1822)	NA|87aa|down_0|NC_019729.1_3147135_3147396_+	pfam04255, DUF433, Protein of unknown function (DUF433)	NA|76aa|down_1|NC_019729.1_3147526_3147754_-	pfam02609, Exonuc_VII_S, Exonuclease VII small subunit	NA|390aa|down_2|NC_019729.1_3147750_3148920_-	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|240aa|down_3|NC_019729.1_3149171_3149891_+	NA	NA|190aa|down_4|NC_019729.1_3149887_3150457_-	PRK00300, gmk, guanylate kinase; Provisional	NA|89aa|down_5|NC_019729.1_3150535_3150802_-	PRK04323, PRK04323, hypothetical protein; Provisional	NA|83aa|down_6|NC_019729.1_3151868_3152117_-	NA	NA|125aa|down_7|NC_019729.1_3152415_3152790_-	NA	NA|166aa|down_8|NC_019729.1_3152871_3153369_-	NA	NA|952aa|down_9|NC_019729.1_3153595_3156451_-	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	32	3371394-3371473	31	CRISPRCasFinder	no	PD-DExK,csx21,csm3gr7,csx19,csm6,csm2gr11,csx10gr5	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	 Type III-D?,Type III-A	TTCCTCCATCCGTTACATCCCTTA	24	0	0	NA	NA	NA	1	1	TypeIII-D?,TypeIII-A	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|205aa|down_1|NC_019729.1_3372931_3373546_+,NA|311aa|down_2|NC_019729.1_3373513_3374446_-,PD-DExK|208aa|down_7|NC_019729.1_3380634_3381258_-,NA|99aa|down_8|NC_019729.1_3381348_3381645_-	NA|443aa|up_9|NC_019729.1_3361642_3362971_+	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39	NA|100aa|up_8|NC_019729.1_3363096_3363396_-	pfam18593, CdiI_2, CdiI immunity protein	NA|180aa|up_7|NC_019729.1_3363392_3363932_-	pfam18431, RNAse_A_bac, Bacterial CdiA-CT RNAse A domain	NA|258aa|up_6|NC_019729.1_3364247_3365021_+	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose	NA|357aa|up_5|NC_019729.1_3365337_3366408_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|244aa|up_4|NC_019729.1_3366479_3367211_+	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|249aa|up_3|NC_019729.1_3367388_3368135_+	pfam09353, DUF1995, Domain of unknown function (DUF1995)	NA|257aa|up_2|NC_019729.1_3368461_3369232_+	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|284aa|up_1|NC_019729.1_3369551_3370403_-	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein	NA|175aa|up_0|NC_019729.1_3370775_3371300_+	pfam14221, DUF4330, Domain of unknown function (DUF4330)	NA|302aa|down_0|NC_019729.1_3371496_3372402_-	PLN02824, PLN02824, hydrolase, alpha/beta fold family protein	NA|205aa|down_1|NC_019729.1_3372931_3373546_+	NA	NA|311aa|down_2|NC_019729.1_3373513_3374446_-	NA	NA|303aa|down_3|NC_019729.1_3375362_3376271_+	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain	NA|405aa|down_4|NC_019729.1_3376653_3377868_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|303aa|down_5|NC_019729.1_3378032_3378941_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|400aa|down_6|NC_019729.1_3379335_3380535_-	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins	PD-DExK|208aa|down_7|NC_019729.1_3380634_3381258_-	NA	NA|99aa|down_8|NC_019729.1_3381348_3381645_-	NA	NA|166aa|down_9|NC_019729.1_3381817_3382315_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	33	3538828-3538923	32	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AAATTAGAACAAGAAATTGAGGAA	24	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|120aa|down_0|NC_019729.1_3539142_3539502_+,NA|48aa|down_8|NC_019729.1_3543463_3543607_-	NA|354aa|up_9|NC_019729.1_3524705_3525767_-	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase	NA|236aa|up_8|NC_019729.1_3526131_3526839_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|470aa|up_7|NC_019729.1_3527120_3528530_-	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|424aa|up_6|NC_019729.1_3528572_3529844_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|256aa|up_5|NC_019729.1_3530164_3530932_-	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|327aa|up_4|NC_019729.1_3531072_3532053_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|334aa|up_3|NC_019729.1_3532265_3533267_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|343aa|up_2|NC_019729.1_3533739_3534768_-	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily	NA|479aa|up_1|NC_019729.1_3534978_3536415_-	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|503aa|up_0|NC_019729.1_3536579_3538088_+	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]	NA|120aa|down_0|NC_019729.1_3539142_3539502_+	NA	NA|71aa|down_1|NC_019729.1_3540324_3540537_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|71aa|down_2|NC_019729.1_3540557_3540770_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|71aa|down_3|NC_019729.1_3540790_3541003_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|81aa|down_4|NC_019729.1_3541130_3541373_+	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated	NA|263aa|down_5|NC_019729.1_3541527_3542316_+	pfam13267, DUF4058, Protein of unknown function (DUF4058)	NA|233aa|down_6|NC_019729.1_3542415_3543114_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|90aa|down_7|NC_019729.1_3543110_3543380_-	PRK13683, PRK13683, hypothetical protein; Provisional	NA|48aa|down_8|NC_019729.1_3543463_3543607_-	NA	NA|353aa|down_9|NC_019729.1_3543798_3544857_+	CHL00004, psbD, photosystem II protein D2
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	34	3626128-3626262	33	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GTGAGGGCGGGTTTGAGAGATTTTCGATTATTGACAAATACTGTTGGT	48	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|267aa|up_8|NC_019729.1_3610292_3611093_+,NA|67aa|up_3|NC_019729.1_3618065_3618266_-,NA|97aa|down_1|NC_019729.1_3628046_3628337_+,NA|65aa|down_2|NC_019729.1_3628442_3628637_-,NA|80aa|down_3|NC_019729.1_3628755_3628995_+,NA|231aa|down_8|NC_019729.1_3642692_3643385_-	NA|303aa|up_9|NC_019729.1_3609387_3610296_+	COG3166, PilN, Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion]	NA|267aa|up_8|NC_019729.1_3610292_3611093_+	NA	NA|797aa|up_7|NC_019729.1_3611473_3613864_+	COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion]	NA|97aa|up_6|NC_019729.1_3614633_3614924_+	cd13831, HU, histone-like DNA-binding protein HU	NA|422aa|up_5|NC_019729.1_3614939_3616205_+	PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated	NA|492aa|up_4|NC_019729.1_3616584_3618060_+	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	NA|67aa|up_3|NC_019729.1_3618065_3618266_-	NA	NA|1823aa|up_2|NC_019729.1_3618680_3624149_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|52aa|up_1|NC_019729.1_3624452_3624608_-	pfam01844, HNH, HNH endonuclease	NA|202aa|up_0|NC_019729.1_3625308_3625914_-	pfam11780, DUF3318, Protein of unknown function (DUF3318)	NA|511aa|down_0|NC_019729.1_3626293_3627826_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|97aa|down_1|NC_019729.1_3628046_3628337_+	NA	NA|65aa|down_2|NC_019729.1_3628442_3628637_-	NA	NA|80aa|down_3|NC_019729.1_3628755_3628995_+	NA	NA|1624aa|down_4|NC_019729.1_3629035_3633907_+	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1770aa|down_5|NC_019729.1_3634463_3639773_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|511aa|down_6|NC_019729.1_3639942_3641475_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|35aa|down_7|NC_019729.1_3641640_3641745_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|231aa|down_8|NC_019729.1_3642692_3643385_-	NA	NA|464aa|down_9|NC_019729.1_3643413_3644805_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	35	3971113-3971243	34	CRISPRCasFinder	no	c2c9_V-U4	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type V-U4	CCTGCGCGGGCCAATGCCCGATGCCCAATTCCCAAT	36	0	0	NA	NA	NA	1	1	TypeV-U4	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|126aa|up_2|NC_019729.1_3962732_3963110_-,NA|62aa|down_1|NC_019729.1_3972179_3972365_+,NA|57aa|down_6|NC_019729.1_3976423_3976594_+	NA|413aa|up_9|NC_019729.1_3947885_3949124_+	cd17602, REC_PatA-like, phosphoacceptor receiver (REC) domain of PatA and similar domains	c2c9_V-U4|361aa|up_8|NC_019729.1_3949582_3950665_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|178aa|up_7|NC_019729.1_3950942_3951476_+	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea	NA|1032aa|up_6|NC_019729.1_3951623_3954719_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|273aa|up_5|NC_019729.1_3954859_3955678_+	pfam13392, HNH_3, HNH endonuclease	NA|1618aa|up_4|NC_019729.1_3956203_3961057_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|438aa|up_3|NC_019729.1_3961356_3962670_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|126aa|up_2|NC_019729.1_3962732_3963110_-	NA	NA|718aa|up_1|NC_019729.1_3963707_3965861_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|1567aa|up_0|NC_019729.1_3966308_3971009_+	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|276aa|down_0|NC_019729.1_3971282_3972110_+	COG4279, COG4279, Uncharacterized conserved protein [Function unknown]	NA|62aa|down_1|NC_019729.1_3972179_3972365_+	NA	NA|211aa|down_2|NC_019729.1_3972398_3973031_-	cd04303, HAD_PGPase, phosphoglycolate phosphatase, similar to Synechococcus elongates phosphoglycolate phosphatase PGP/CbbZ	NA|322aa|down_3|NC_019729.1_3973242_3974208_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|321aa|down_4|NC_019729.1_3974417_3975380_+	pfam09150, Carot_N, Orange carotenoid protein, N-terminal	NA|145aa|down_5|NC_019729.1_3975720_3976155_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|57aa|down_6|NC_019729.1_3976423_3976594_+	NA	NA|141aa|down_7|NC_019729.1_3976626_3977049_-	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]	NA|558aa|down_8|NC_019729.1_3977558_3979232_-	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains	c2c9_V-U4|376aa|down_9|NC_019729.1_3979492_3980620_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	36	4041098-4041181	35	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CACTGAATCGGGAGGGCCGCGCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|67aa|up_8|NC_019729.1_4028958_4029159_+,NA|148aa|down_6|NC_019729.1_4048206_4048650_-	NA|277aa|up_9|NC_019729.1_4027969_4028800_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|67aa|up_8|NC_019729.1_4028958_4029159_+	NA	NA|554aa|up_7|NC_019729.1_4031708_4033370_-	cd03398, PAP2_haloperoxidase, PAP2, haloperoxidase_like subfamily	NA|433aa|up_6|NC_019729.1_4034038_4035337_-	pfam13646, HEAT_2, HEAT repeats	NA|184aa|up_5|NC_019729.1_4035382_4035934_-	COG4449, COG4449, Predicted protease of the Abi (CAAX) family [General function prediction only]	NA|105aa|up_4|NC_019729.1_4035993_4036308_+	PRK14423, PRK14423, acylphosphatase; Provisional	NA|217aa|up_3|NC_019729.1_4036438_4037089_-	PRK01222, PRK01222, phosphoribosylanthranilate isomerase	NA|95aa|up_2|NC_019729.1_4037222_4037507_+	TIGR03049, Photosystem_I_reaction_center_subunit_PsaK, photosystem I reaction center subunit PsaK	NA|399aa|up_1|NC_019729.1_4037587_4038784_+	cd06164, S2P-M50_SpoIVFB_CBS, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation	NA|652aa|up_0|NC_019729.1_4038975_4040931_+	COG4252, COG4252, Predicted transmembrane sensor domain [Signal transduction mechanisms]	NA|251aa|down_0|NC_019729.1_4042074_4042827_-	COG0095, LplA, Lipoate-protein ligase A [Coenzyme metabolism]	NA|109aa|down_1|NC_019729.1_4042970_4043297_+	PRK09381, trxA, thioredoxin TrxA	NA|411aa|down_2|NC_019729.1_4043520_4044753_+	PRK07366, PRK07366, LL-diaminopimelate aminotransferase	NA|133aa|down_3|NC_019729.1_4044996_4045395_-	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|269aa|down_4|NC_019729.1_4045522_4046329_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|335aa|down_5|NC_019729.1_4046962_4047967_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|148aa|down_6|NC_019729.1_4048206_4048650_-	NA	NA|1175aa|down_7|NC_019729.1_4049055_4052580_-	cd07302, CHD, cyclase homology domain	NA|208aa|down_8|NC_019729.1_4054282_4054906_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|2644aa|down_9|NC_019729.1_4055566_4063498_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	37	4153091-4153171	36	CRISPRCasFinder	no	cas14j	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	ATTGAGCAATCACCTACTCAATCA	24	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|52aa|up_9|NC_019729.1_4143754_4143910_+,NA|56aa|up_2|NC_019729.1_4150358_4150526_+,NA|194aa|up_0|NC_019729.1_4152066_4152648_+,NA|110aa|down_2|NC_019729.1_4154696_4155026_+,NA|87aa|down_3|NC_019729.1_4155039_4155300_+,NA|66aa|down_8|NC_019729.1_4160536_4160734_-	NA|52aa|up_9|NC_019729.1_4143754_4143910_+	NA	NA|693aa|up_8|NC_019729.1_4143922_4146001_+	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|300aa|up_7|NC_019729.1_4146105_4147005_+	cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, similar to Synechocystis Slr1438	NA|360aa|up_6|NC_019729.1_4147337_4148417_+	PRK09196, PRK09196, fructose-bisphosphate aldolase class II	NA|213aa|up_5|NC_019729.1_4148888_4149527_+	pfam13588, HSDR_N_2, Type I restriction enzyme R protein N-terminus (HSDR_N)	NA|58aa|up_4|NC_019729.1_4149841_4150015_-	pfam18480, DUF5615, Domain of unknown function (DUF5615)	NA|114aa|up_3|NC_019729.1_4150018_4150360_-	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|56aa|up_2|NC_019729.1_4150358_4150526_+	NA	NA|459aa|up_1|NC_019729.1_4150484_4151861_-	pfam00931, NB-ARC, NB-ARC domain	NA|194aa|up_0|NC_019729.1_4152066_4152648_+	NA	NA|112aa|down_0|NC_019729.1_4153686_4154022_-	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein	NA|139aa|down_1|NC_019729.1_4154009_4154426_-	pfam08814, XisH, XisH protein	NA|110aa|down_2|NC_019729.1_4154696_4155026_+	NA	NA|87aa|down_3|NC_019729.1_4155039_4155300_+	NA	NA|234aa|down_4|NC_019729.1_4155688_4156390_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|160aa|down_5|NC_019729.1_4156542_4157022_+	cd04671, Nudix_Hydrolase_13, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|572aa|down_6|NC_019729.1_4157830_4159546_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|246aa|down_7|NC_019729.1_4159791_4160529_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|66aa|down_8|NC_019729.1_4160536_4160734_-	NA	NA|848aa|down_9|NC_019729.1_4161311_4163855_+	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	38	4168609-4168802	6,37	PILER-CR,CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	ACTCCCCACTGGCTGGGGAAACTAATTGAATGGAAAC,CTCCCCACTGGCTGGGGAAACTAATTGAATGG	37,32	0	0	NA	NA	NA:NA	2,2	2	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|66aa|up_7|NC_019729.1_4160536_4160734_-,NA|115aa|up_4|NC_019729.1_4164801_4165146_-,NA|1012aa|down_4|NC_019729.1_4177101_4180137_-	NA|572aa|up_9|NC_019729.1_4157830_4159546_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|246aa|up_8|NC_019729.1_4159791_4160529_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|66aa|up_7|NC_019729.1_4160536_4160734_-	NA	NA|848aa|up_6|NC_019729.1_4161311_4163855_+	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity	NA|186aa|up_5|NC_019729.1_4164055_4164613_+	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|115aa|up_4|NC_019729.1_4164801_4165146_-	NA	NA|74aa|up_3|NC_019729.1_4165959_4166181_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|227aa|up_2|NC_019729.1_4166226_4166907_-	cd16444, LipB, lipoyl/octanoyl transferase	NA|218aa|up_1|NC_019729.1_4167058_4167712_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|144aa|up_0|NC_019729.1_4168166_4168598_+	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	NA|153aa|down_0|NC_019729.1_4168922_4169381_-	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides	NA|299aa|down_1|NC_019729.1_4169670_4170567_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|243aa|down_2|NC_019729.1_4170971_4171700_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|1223aa|down_3|NC_019729.1_4173443_4177112_-	NF012221, MARTX_Nterm, MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	NA|1012aa|down_4|NC_019729.1_4177101_4180137_-	NA	NA|90aa|down_5|NC_019729.1_4180150_4180420_-	PRK12864, PRK12864, YciI-like protein; Reviewed	NA|191aa|down_6|NC_019729.1_4180581_4181154_+	pfam05685, Uma2, Putative restriction endonuclease	NA|821aa|down_7|NC_019729.1_4181415_4183878_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|544aa|down_8|NC_019729.1_4184411_4186043_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|603aa|down_9|NC_019729.1_4189776_4191585_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	39	4217750-4217833	38	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	TCAATCCAAAACCGACAATCGAAAATC	27	1	5	4217777-4217806|4217777-4217806|4217777-4217806|4217777-4217806|4217777-4217806	NC_019729.1_5786505-5786476|NC_019729.1_5786664-5786635|NC_019729.1_6048487-6048458|NC_019729.1_1646908-1646937|NC_019729.1_4852089-4852118	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|155aa|up_6|NC_019729.1_4210179_4210644_+,NA|150aa|down_0|NC_019729.1_4217985_4218435_-,NA|100aa|down_2|NC_019729.1_4219660_4219960_+,NA|73aa|down_7|NC_019729.1_4236209_4236428_+,NA|77aa|down_8|NC_019729.1_4236481_4236712_+,NA|71aa|down_9|NC_019729.1_4236762_4236975_+	NA|491aa|up_9|NC_019729.1_4206945_4208418_-	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|225aa|up_8|NC_019729.1_4208451_4209126_+	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	NA|187aa|up_7|NC_019729.1_4209430_4209991_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|155aa|up_6|NC_019729.1_4210179_4210644_+	NA	NA|803aa|up_5|NC_019729.1_4211334_4213743_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|200aa|up_4|NC_019729.1_4214021_4214621_-	pfam01292, Ni_hydr_CYTB, Prokaryotic cytochrome b561	NA|194aa|up_3|NC_019729.1_4214818_4215400_+	pfam02659, Mntp, Putative manganese efflux pump	NA|185aa|up_2|NC_019729.1_4215543_4216098_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|46aa|up_1|NC_019729.1_4216290_4216428_-	CHL00047, psbK, photosystem II protein K	NA|377aa|up_0|NC_019729.1_4216488_4217619_-	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|150aa|down_0|NC_019729.1_4217985_4218435_-	NA	NA|266aa|down_1|NC_019729.1_4218694_4219492_+	PRK00235, cobS, cobalamin synthase; Reviewed	NA|100aa|down_2|NC_019729.1_4219660_4219960_+	NA	NA|1481aa|down_3|NC_019729.1_4220019_4224462_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|1701aa|down_4|NC_019729.1_4224733_4229836_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|972aa|down_5|NC_019729.1_4229839_4232755_-	PRK12316, PRK12316, peptide synthase; Provisional	NA|584aa|down_6|NC_019729.1_4234353_4236105_-	pfam07538, ChW, Clostridial hydrophobic W	NA|73aa|down_7|NC_019729.1_4236209_4236428_+	NA	NA|77aa|down_8|NC_019729.1_4236481_4236712_+	NA	NA|71aa|down_9|NC_019729.1_4236762_4236975_+	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	40	4644663-4645729	39,5,7	CRISPRCasFinder,CRT,PILER-CR	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GTTTCAATCCCCTCTCGGGGAAGTGGTAAAGGAGAC,GTTTCAATCCCCTCTCGGGGAAGTGGTAAAGGAGAC,GTTTCAATCCCCTCTCGGGGAAGTGGTAAAGGAGAC	36,36,36	0	0	NA	NA	NA:NA:NA	14,14,13	14	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|60aa|down_0|NC_019729.1_4645746_4645926_-,NA|100aa|down_5|NC_019729.1_4649389_4649689_-,NA|224aa|down_6|NC_019729.1_4649740_4650412_-	NA|368aa|up_9|NC_019729.1_4630184_4631288_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|592aa|up_8|NC_019729.1_4631801_4633577_-	pfam14516, AAA_35, AAA-like domain	NA|182aa|up_7|NC_019729.1_4633752_4634298_+	pfam01957, NfeD, NfeD-like C-terminal, partner-binding	NA|187aa|up_6|NC_019729.1_4634425_4634986_+	cd08829, SPFH_paraslipin, Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|174aa|up_5|NC_019729.1_4635102_4635624_+	pfam16734, Pilin_GH, Type IV pilin-like G and H, putative	NA|172aa|up_4|NC_019729.1_4635731_4636247_+	pfam16734, Pilin_GH, Type IV pilin-like G and H, putative	NA|938aa|up_3|NC_019729.1_4636266_4639080_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|353aa|up_2|NC_019729.1_4639500_4640559_+	pfam02254, TrkA_N, TrkA-N domain	NA|596aa|up_1|NC_019729.1_4641187_4642975_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|297aa|up_0|NC_019729.1_4643407_4644298_+	cd03514, CrtR_beta-carotene-hydroxylase, Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae	NA|60aa|down_0|NC_019729.1_4645746_4645926_-	NA	NA|131aa|down_1|NC_019729.1_4646247_4646640_-	pfam07736, CM_1, Chorismate mutase type I	NA|273aa|down_2|NC_019729.1_4646793_4647612_-	TIGR00706, Putative_signal_peptide_peptidase_SppA, signal peptide peptidase SppA, 36K type	NA|358aa|down_3|NC_019729.1_4647886_4648960_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|140aa|down_4|NC_019729.1_4648973_4649393_-	pfam13470, PIN_3, PIN domain	NA|100aa|down_5|NC_019729.1_4649389_4649689_-	NA	NA|224aa|down_6|NC_019729.1_4649740_4650412_-	NA	NA|391aa|down_7|NC_019729.1_4650413_4651586_-	pfam13175, AAA_15, AAA ATPase domain	NA|290aa|down_8|NC_019729.1_4651633_4652503_+	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily	NA|1229aa|down_9|NC_019729.1_4652689_4656376_+	PLN02666, PLN02666, 5-oxoprolinase
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	41	4700659-4700758	40	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	TGCGCGTTGGAATGAATCCGGGGGCTTGCGAT	32	1	1	4700691-4700726	NC_019729.1_962593-962628	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|80aa|down_1|NC_019729.1_4701643_4701883_+,NA|105aa|down_9|NC_019729.1_4713879_4714194_+	NA|226aa|up_9|NC_019729.1_4690161_4690839_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|198aa|up_8|NC_019729.1_4690924_4691518_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|228aa|up_7|NC_019729.1_4691647_4692331_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|252aa|up_6|NC_019729.1_4692529_4693285_-	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|636aa|up_5|NC_019729.1_4693410_4695318_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|160aa|up_4|NC_019729.1_4695740_4696220_+	PRK10672, PRK10672, endolytic peptidoglycan transglycosylase RlpA	NA|157aa|up_3|NC_019729.1_4696448_4696919_+	pfam10989, DUF2808, Protein of unknown function (DUF2808)	NA|315aa|up_2|NC_019729.1_4697092_4698037_-	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]	NA|328aa|up_1|NC_019729.1_4698124_4699108_-	pfam12836, HHH_3, Helix-hairpin-helix motif	NA|335aa|up_0|NC_019729.1_4699502_4700507_-	cd11024, CuRO_1_2DMCO_NIR_like, The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase	NA|230aa|down_0|NC_019729.1_4700876_4701566_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|80aa|down_1|NC_019729.1_4701643_4701883_+	NA	NA|116aa|down_2|NC_019729.1_4701879_4702227_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|444aa|down_3|NC_019729.1_4702247_4703579_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|663aa|down_4|NC_019729.1_4703967_4705956_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|79aa|down_5|NC_019729.1_4706128_4706365_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|690aa|down_6|NC_019729.1_4706443_4708513_-	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain	NA|991aa|down_7|NC_019729.1_4708659_4711632_-	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain	NA|602aa|down_8|NC_019729.1_4711988_4713794_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|105aa|down_9|NC_019729.1_4713879_4714194_+	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	42	4759614-4759719	41	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CTTCGATCTCGTCATCATCATCGCC	25	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|85aa|down_0|NC_019729.1_4763367_4763622_+,NA|51aa|down_2|NC_019729.1_4765348_4765501_+,NA|86aa|down_7|NC_019729.1_4769399_4769657_+	NA|452aa|up_9|NC_019729.1_4741828_4743184_+	NF033203, entero_EhxA, enterohemolysin EhxA	NA|455aa|up_8|NC_019729.1_4743392_4744757_-	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|81aa|up_7|NC_019729.1_4747086_4747329_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|94aa|up_6|NC_019729.1_4747318_4747600_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|538aa|up_5|NC_019729.1_4747916_4749530_+	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown]	NA|455aa|up_4|NC_019729.1_4750197_4751562_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|398aa|up_3|NC_019729.1_4751929_4753123_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|up_2|NC_019729.1_4753240_4753900_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|157aa|up_1|NC_019729.1_4754071_4754542_+	pfam05685, Uma2, Putative restriction endonuclease	NA|356aa|up_0|NC_019729.1_4754526_4755593_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	NA|85aa|down_0|NC_019729.1_4763367_4763622_+	NA	NA|567aa|down_1|NC_019729.1_4763626_4765327_+	pfam12770, CHAT, CHAT domain	NA|51aa|down_2|NC_019729.1_4765348_4765501_+	NA	NA|137aa|down_3|NC_019729.1_4767060_4767471_+	pfam14250, AbrB-like, AbrB-like transcriptional regulator	NA|156aa|down_4|NC_019729.1_4767561_4768029_+	PRK00117, recX, recombination regulator RecX; Reviewed	NA|172aa|down_5|NC_019729.1_4768130_4768646_-	pfam14328, DUF4385, Domain of unknown function (DUF4385)	NA|142aa|down_6|NC_019729.1_4768642_4769068_-	COG4270, COG4270, Predicted membrane protein [Function unknown]	NA|86aa|down_7|NC_019729.1_4769399_4769657_+	NA	NA|164aa|down_8|NC_019729.1_4770227_4770719_+	pfam13767, DUF4168, Domain of unknown function (DUF4168)	NA|146aa|down_9|NC_019729.1_4771137_4771575_+	PRK13261, ureE, urease accessory protein UreE; Provisional
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	43	4853294-4853410	42	CRISPRCasFinder	no	csa3,c2c9_V-U4	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-A, Type V-U4?	CGCCCCGACAATTCCCAAAATGATTAGTCCCAG	33	0	0	NA	NA	NA	1	1	TypeI-A,TypeV-U4?	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|49aa|up_2|NC_019729.1_4852011_4852158_+,NA|72aa|up_1|NC_019729.1_4852210_4852426_+,NA|136aa|up_0|NC_019729.1_4852415_4852823_+,NA|59aa|down_0|NC_019729.1_4854761_4854938_+,NA|75aa|down_1|NC_019729.1_4854971_4855196_+,NA|1744aa|down_2|NC_019729.1_4855188_4860420_+,NA|79aa|down_9|NC_019729.1_4866463_4866700_-	NA|56aa|up_9|NC_019729.1_4847269_4847437_-	pfam02069, Metallothio_Pro, Prokaryotic metallothionein	csa3|136aa|up_8|NC_019729.1_4847585_4847993_+	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|67aa|up_7|NC_019729.1_4847995_4848196_-	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|279aa|up_6|NC_019729.1_4848343_4849180_-	PRK13398, PRK13398, 3-deoxy-7-phosphoheptulonate synthase; Provisional	NA|208aa|up_5|NC_019729.1_4849269_4849893_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	c2c9_V-U4|376aa|up_4|NC_019729.1_4849892_4851020_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|72aa|up_3|NC_019729.1_4851796_4852012_+	pfam09274, ParG, ParG	NA|49aa|up_2|NC_019729.1_4852011_4852158_+	NA	NA|72aa|up_1|NC_019729.1_4852210_4852426_+	NA	NA|136aa|up_0|NC_019729.1_4852415_4852823_+	NA	NA|59aa|down_0|NC_019729.1_4854761_4854938_+	NA	NA|75aa|down_1|NC_019729.1_4854971_4855196_+	NA	NA|1744aa|down_2|NC_019729.1_4855188_4860420_+	NA	NA|219aa|down_3|NC_019729.1_4860475_4861132_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|347aa|down_4|NC_019729.1_4861196_4862237_+	COG4966, PilW, Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion]	NA|203aa|down_5|NC_019729.1_4862295_4862904_+	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|213aa|down_6|NC_019729.1_4863015_4863654_+	pfam05685, Uma2, Putative restriction endonuclease	NA|249aa|down_7|NC_019729.1_4864363_4865110_-	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK	NA|273aa|down_8|NC_019729.1_4865338_4866157_+	sd00006, TPR, Tetratricopeptide repeat	NA|79aa|down_9|NC_019729.1_4866463_4866700_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	44	4873443-4876460	8,43,6	PILER-CR,CRISPRCasFinder,CRT	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GCCGGAATCAACCTAAACCCCTATCAGGGATTGAAAC,GCCGGAATCAACCTAAACCCCTATCAGGGATTGAAAC,GCCGGAATCAACCTAAACCCCTATCAGGGATTGAAAC	37,37,37	0	0	NA	NA	I-D,II-B:I-D,II-B:I-D,II-B	40,41,41	41	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|79aa|up_5|NC_019729.1_4866463_4866700_-,NA|58aa|down_5|NC_019729.1_4881529_4881703_-,NA|248aa|down_6|NC_019729.1_4882487_4883231_+	NA|203aa|up_9|NC_019729.1_4862295_4862904_+	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|213aa|up_8|NC_019729.1_4863015_4863654_+	pfam05685, Uma2, Putative restriction endonuclease	NA|249aa|up_7|NC_019729.1_4864363_4865110_-	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK	NA|273aa|up_6|NC_019729.1_4865338_4866157_+	sd00006, TPR, Tetratricopeptide repeat	NA|79aa|up_5|NC_019729.1_4866463_4866700_-	NA	NA|267aa|up_4|NC_019729.1_4867059_4867860_-	TIGR01548, Imidazoleglycerol-phosphate_dehydratase, haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548	NA|100aa|up_3|NC_019729.1_4868048_4868348_+	PRK02724, PRK02724, 30S ribosomal protein PSRP-3	NA|358aa|up_2|NC_019729.1_4869060_4870134_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|245aa|up_1|NC_019729.1_4870709_4871444_+	pfam06967, Mo-nitro_C, Mo-dependent nitrogenase C-terminus	NA|347aa|up_0|NC_019729.1_4871991_4873032_+	PRK12299, obgE, GTPase CgtA; Reviewed	NA|132aa|down_0|NC_019729.1_4876593_4876989_-	PHA00458, PHA00458, single-stranded DNA-binding protein	NA|542aa|down_1|NC_019729.1_4877054_4878680_-	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|263aa|down_2|NC_019729.1_4878942_4879731_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|52aa|down_3|NC_019729.1_4879893_4880049_+	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256)	NA|312aa|down_4|NC_019729.1_4880121_4881057_+	cd14949, Asparaginase_2_like_3, Uncharacterized bacterial subfamily of the L-Asparaginase type 2-like enzymes, an Ntn-hydrolase family	NA|58aa|down_5|NC_019729.1_4881529_4881703_-	NA	NA|248aa|down_6|NC_019729.1_4882487_4883231_+	NA	NA|463aa|down_7|NC_019729.1_4883411_4884800_-	PRK14360, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|337aa|down_8|NC_019729.1_4885278_4886289_+	pfam06217, GAGA_bind, GAGA binding protein-like family	NA|275aa|down_9|NC_019729.1_4886314_4887139_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	45	4923176-4923255	44	CRISPRCasFinder	no	Cas14c_CAS-V-F,DinG	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	TTGTGGAACGGGCATCTTGCCTG	23	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|102aa|up_9|NC_019729.1_4909098_4909404_-,NA|326aa|up_6|NC_019729.1_4911930_4912908_+,NA|173aa|up_0|NC_019729.1_4919317_4919836_-,NA|262aa|down_2|NC_019729.1_4927894_4928680_+,NA|47aa|down_5|NC_019729.1_4930734_4930875_+,NA|127aa|down_6|NC_019729.1_4930994_4931375_+,NA|198aa|down_8|NC_019729.1_4931692_4932286_-,NA|135aa|down_9|NC_019729.1_4932292_4932697_-	NA|102aa|up_9|NC_019729.1_4909098_4909404_-	NA	NA|260aa|up_8|NC_019729.1_4909747_4910527_+	NF033203, entero_EhxA, enterohemolysin EhxA	NA|406aa|up_7|NC_019729.1_4910648_4911866_-	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|326aa|up_6|NC_019729.1_4911930_4912908_+	NA	NA|187aa|up_5|NC_019729.1_4912986_4913547_+	pfam05685, Uma2, Putative restriction endonuclease	NA|132aa|up_4|NC_019729.1_4913863_4914259_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|620aa|up_3|NC_019729.1_4914340_4916200_-	COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|562aa|up_2|NC_019729.1_4916369_4918055_-	pfam02254, TrkA_N, TrkA-N domain	NA|204aa|up_1|NC_019729.1_4918629_4919241_+	pfam14218, COP23, Circadian oscillating protein COP23	NA|173aa|up_0|NC_019729.1_4919317_4919836_-	NA	NA|599aa|down_0|NC_019729.1_4924162_4925959_+	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH)	Cas14c_CAS-V-F|404aa|down_1|NC_019729.1_4926280_4927492_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|262aa|down_2|NC_019729.1_4927894_4928680_+	NA	NA|254aa|down_3|NC_019729.1_4928863_4929625_-	pfam10127, Nuc-transf, Predicted nucleotidyltransferase	NA|314aa|down_4|NC_019729.1_4929747_4930689_-	pfam10127, Nuc-transf, Predicted nucleotidyltransferase	NA|47aa|down_5|NC_019729.1_4930734_4930875_+	NA	NA|127aa|down_6|NC_019729.1_4930994_4931375_+	NA	NA|69aa|down_7|NC_019729.1_4931428_4931635_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|198aa|down_8|NC_019729.1_4931692_4932286_-	NA	NA|135aa|down_9|NC_019729.1_4932292_4932697_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	46	4977856-4984951	45,7,9,10	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GTTTCAATCCCTAATAGGGTTTTAGTTTGATTGCGGC,GTTTCAATCCCTAATAGGGTTTTAGTTTGATTGCGGC,GCCGCAATCAAACTAAAACCCTATTAGGGATTGAAAC,GCCGCAATCAAACTAAAACCCTATTAGGGATTGAAAC	37,37,37,37	0	0	NA	NA	I-D,II-B:I-D,II-B:I-D,II-B:I-D,II-B	95,95,92,92	95	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|161aa|up_3|NC_019729.1_4973388_4973871_-,NA|69aa|down_3|NC_019729.1_4989298_4989505_+	NA|38aa|up_9|NC_019729.1_4965466_4965580_-	PRK04989, psbM, photosystem II reaction center protein M; Provisional	NA|99aa|up_8|NC_019729.1_4965875_4966172_-	COG0633, Fdx, Ferredoxin [Energy production and conversion]	NA|631aa|up_7|NC_019729.1_4966321_4968214_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|485aa|up_6|NC_019729.1_4968355_4969810_-	TIGR03279, cyano_FeS_chp, putative radical SAM enzyme, TIGR03279 family	NA|213aa|up_5|NC_019729.1_4970066_4970705_+	pfam05875, Ceramidase, Ceramidase	NA|853aa|up_4|NC_019729.1_4970743_4973302_-	COG1221, PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms]	NA|161aa|up_3|NC_019729.1_4973388_4973871_-	NA	NA|257aa|up_2|NC_019729.1_4973895_4974666_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|301aa|up_1|NC_019729.1_4974870_4975773_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|204aa|up_0|NC_019729.1_4976094_4976706_+	pfam13098, Thioredoxin_2, Thioredoxin-like domain	NA|354aa|down_0|NC_019729.1_4985312_4986374_+	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|195aa|down_1|NC_019729.1_4986450_4987035_-	pfam05685, Uma2, Putative restriction endonuclease	NA|526aa|down_2|NC_019729.1_4987424_4989002_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|69aa|down_3|NC_019729.1_4989298_4989505_+	NA	NA|315aa|down_4|NC_019729.1_4989843_4990788_+	PRK02308, uvsE, putative UV damage endonuclease; Provisional	NA|224aa|down_5|NC_019729.1_4991278_4991950_+	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|129aa|down_6|NC_019729.1_4992179_4992566_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|206aa|down_7|NC_019729.1_4992686_4993304_-	cd04630, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|346aa|down_8|NC_019729.1_4993799_4994837_+	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed	NA|431aa|down_9|NC_019729.1_4994982_4996275_+	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	47	4990863-4991025	46	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AAGAACAGGCTTTCCGGCCTGTTCCACAAAAAATGAATTTTATTGTGGGGTG	52	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|161aa|up_8|NC_019729.1_4973388_4973871_-,NA|69aa|up_1|NC_019729.1_4989298_4989505_+,NA|223aa|down_6|NC_019729.1_4999676_5000345_-,NA|55aa|down_9|NC_019729.1_5003515_5003680_+	NA|853aa|up_9|NC_019729.1_4970743_4973302_-	COG1221, PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms]	NA|161aa|up_8|NC_019729.1_4973388_4973871_-	NA	NA|257aa|up_7|NC_019729.1_4973895_4974666_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|301aa|up_6|NC_019729.1_4974870_4975773_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|204aa|up_5|NC_019729.1_4976094_4976706_+	pfam13098, Thioredoxin_2, Thioredoxin-like domain	NA|354aa|up_4|NC_019729.1_4985312_4986374_+	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|195aa|up_3|NC_019729.1_4986450_4987035_-	pfam05685, Uma2, Putative restriction endonuclease	NA|526aa|up_2|NC_019729.1_4987424_4989002_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|69aa|up_1|NC_019729.1_4989298_4989505_+	NA	NA|315aa|up_0|NC_019729.1_4989843_4990788_+	PRK02308, uvsE, putative UV damage endonuclease; Provisional	NA|224aa|down_0|NC_019729.1_4991278_4991950_+	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|129aa|down_1|NC_019729.1_4992179_4992566_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|206aa|down_2|NC_019729.1_4992686_4993304_-	cd04630, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|346aa|down_3|NC_019729.1_4993799_4994837_+	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed	NA|431aa|down_4|NC_019729.1_4994982_4996275_+	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|1007aa|down_5|NC_019729.1_4996526_4999547_+	PRK02509, PRK02509, hypothetical protein; Provisional	NA|223aa|down_6|NC_019729.1_4999676_5000345_-	NA	NA|317aa|down_7|NC_019729.1_5000573_5001524_-	cd18710, PIN_VapC-like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily	NA|543aa|down_8|NC_019729.1_5001764_5003393_-	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|55aa|down_9|NC_019729.1_5003515_5003680_+	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	48	5142695-5142796	47	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CAGGCTGATGACCCAATTGCTCGATCG	27	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|49aa|up_6|NC_019729.1_5130179_5130326_+,NA|394aa|up_5|NC_019729.1_5130684_5131866_+,NA|357aa|up_4|NC_019729.1_5131858_5132929_+,NA|64aa|down_1|NC_019729.1_5143845_5144037_+	NA|344aa|up_9|NC_019729.1_5126288_5127320_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|367aa|up_8|NC_019729.1_5127927_5129028_+	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	NA|180aa|up_7|NC_019729.1_5129200_5129740_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|49aa|up_6|NC_019729.1_5130179_5130326_+	NA	NA|394aa|up_5|NC_019729.1_5130684_5131866_+	NA	NA|357aa|up_4|NC_019729.1_5131858_5132929_+	NA	NA|789aa|up_3|NC_019729.1_5133273_5135640_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|1093aa|up_2|NC_019729.1_5135777_5139056_+	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|136aa|up_1|NC_019729.1_5139039_5139447_+	pfam18480, DUF5615, Domain of unknown function (DUF5615)	NA|930aa|up_0|NC_019729.1_5139439_5142229_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|237aa|down_0|NC_019729.1_5142885_5143596_-	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane]	NA|64aa|down_1|NC_019729.1_5143845_5144037_+	NA	NA|807aa|down_2|NC_019729.1_5144102_5146523_-	TIGR02470, Sucrose_synthase_1, sucrose synthase	NA|508aa|down_3|NC_019729.1_5146652_5148176_-	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP	NA|401aa|down_4|NC_019729.1_5148255_5149458_-	sd00006, TPR, Tetratricopeptide repeat	NA|114aa|down_5|NC_019729.1_5150028_5150370_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|134aa|down_6|NC_019729.1_5150356_5150758_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|566aa|down_7|NC_019729.1_5150904_5152602_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|173aa|down_8|NC_019729.1_5153603_5154122_-	pfam10726, DUF2518, Protein of function (DUF2518)	NA|353aa|down_9|NC_019729.1_5154304_5155363_-	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	49	5412016-5412096	48	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AATCCCAAATCTCAAATCTAAAAT	24	1	5	5412040-5412072|5412040-5412072|5412040-5412072|5412040-5412072|5412040-5412072	NC_019729.1_1646907-1646939|NC_019729.1_4852088-4852120|NC_019729.1_5786506-5786474|NC_019729.1_5786665-5786633|NC_019729.1_6048488-6048456	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|88aa|up_8|NC_019729.1_5402945_5403209_+,NA|117aa|up_2|NC_019729.1_5410279_5410630_+,NA|68aa|up_0|NC_019729.1_5411600_5411804_+,NA|171aa|down_0|NC_019729.1_5412271_5412784_+	NA|517aa|up_9|NC_019729.1_5400900_5402451_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|88aa|up_8|NC_019729.1_5402945_5403209_+	NA	NA|454aa|up_7|NC_019729.1_5403307_5404669_+	COG3330, COG3330, Uncharacterized protein conserved in bacteria [Function unknown]	NA|439aa|up_6|NC_019729.1_5405237_5406554_+	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold	NA|300aa|up_5|NC_019729.1_5406737_5407637_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|288aa|up_4|NC_019729.1_5407867_5408731_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|361aa|up_3|NC_019729.1_5408863_5409946_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|117aa|up_2|NC_019729.1_5410279_5410630_+	NA	NA|146aa|up_1|NC_019729.1_5410999_5411437_+	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|68aa|up_0|NC_019729.1_5411600_5411804_+	NA	NA|171aa|down_0|NC_019729.1_5412271_5412784_+	NA	NA|683aa|down_1|NC_019729.1_5413045_5415094_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|1146aa|down_2|NC_019729.1_5416006_5419444_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|433aa|down_3|NC_019729.1_5419644_5420943_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|202aa|down_4|NC_019729.1_5421118_5421724_-	pfam01947, DUF98, Protein of unknown function (DUF98)	NA|540aa|down_5|NC_019729.1_5422014_5423634_+	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only]	NA|113aa|down_6|NC_019729.1_5423641_5423980_-	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein	NA|139aa|down_7|NC_019729.1_5423967_5424384_-	pfam08814, XisH, XisH protein	NA|184aa|down_8|NC_019729.1_5424386_5424938_-	cd02232, cupin_ARD, acireductone dioxygenase (ARD), cupin domain	NA|322aa|down_9|NC_019729.1_5425205_5426171_+	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	50	5463123-5463238	49	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CGAATCCGGTTAATTGCACCTGATATTTGTAGG	33	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|261aa|up_2|NC_019729.1_5460238_5461021_+,NA|68aa|up_1|NC_019729.1_5461326_5461530_-,NA|69aa|down_3|NC_019729.1_5467711_5467918_-,NA|91aa|down_4|NC_019729.1_5467981_5468254_+,NA|120aa|down_6|NC_019729.1_5468873_5469233_-,NA|79aa|down_7|NC_019729.1_5469298_5469535_-	NA|183aa|up_9|NC_019729.1_5450821_5451370_+	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|364aa|up_8|NC_019729.1_5451656_5452748_+	TIGR02198, Uncharacterized_sugar_kinase_BU060, rfaE bifunctional protein, domain I	NA|585aa|up_7|NC_019729.1_5453026_5454781_-	cd07381, MPP_CapA, CapA and related proteins, metallophosphatase domain	NA|398aa|up_6|NC_019729.1_5455683_5456877_+	pfam13646, HEAT_2, HEAT repeats	NA|359aa|up_5|NC_019729.1_5456970_5458047_+	cd03802, GT4_AviGT4-like, UDP-Glc:tetrahydrobiopterin alpha-glucosyltransferase and similar proteins	NA|254aa|up_4|NC_019729.1_5458091_5458853_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|310aa|up_3|NC_019729.1_5459143_5460073_+	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|261aa|up_2|NC_019729.1_5460238_5461021_+	NA	NA|68aa|up_1|NC_019729.1_5461326_5461530_-	NA	NA|355aa|up_0|NC_019729.1_5462031_5463096_+	PLN02433, PLN02433, uroporphyrinogen decarboxylase	NA|322aa|down_0|NC_019729.1_5463499_5464465_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|531aa|down_1|NC_019729.1_5464933_5466526_+	pfam13282, DUF4070, Domain of unknown function (DUF4070)	NA|300aa|down_2|NC_019729.1_5466830_5467730_+	PRK03982, PRK03982, heat shock protein HtpX; Provisional	NA|69aa|down_3|NC_019729.1_5467711_5467918_-	NA	NA|91aa|down_4|NC_019729.1_5467981_5468254_+	NA	NA|139aa|down_5|NC_019729.1_5468253_5468670_+	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|120aa|down_6|NC_019729.1_5468873_5469233_-	NA	NA|79aa|down_7|NC_019729.1_5469298_5469535_-	NA	NA|461aa|down_8|NC_019729.1_5469807_5471190_+	pfam00931, NB-ARC, NB-ARC domain	NA|159aa|down_9|NC_019729.1_5471282_5471759_+	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	51	5747468-5747594	50	CRISPRCasFinder	no	Cas14c_CAS-V-F,cas14j	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	TTGGTTTGCGGGTAGTCAGAAACCGGGTTTTTTACGGAAATACT	44	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|196aa|up_8|NC_019729.1_5741187_5741775_+,NA|79aa|up_3|NC_019729.1_5745926_5746163_-,NA|78aa|up_2|NC_019729.1_5746476_5746710_-,NA|70aa|up_0|NC_019729.1_5747155_5747365_-,NA|78aa|down_0|NC_019729.1_5747711_5747945_-,NA|74aa|down_2|NC_019729.1_5748413_5748635_-,NA|54aa|down_5|NC_019729.1_5749350_5749512_+	NA|210aa|up_9|NC_019729.1_5740176_5740806_+	cd02900, Macro_Appr_pase, macrodomain, Appr-1"-pase family	NA|196aa|up_8|NC_019729.1_5741187_5741775_+	NA	Cas14c_CAS-V-F|406aa|up_7|NC_019729.1_5741991_5743209_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|596aa|up_6|NC_019729.1_5743274_5745062_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|71aa|up_5|NC_019729.1_5745291_5745504_+	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB	NA|135aa|up_4|NC_019729.1_5745490_5745895_+	cd18761, PIN_MtVapC3-like, uncharacterized subgroup of the VapC3-like nuclease subfamily of the PIN domain superfamily	NA|79aa|up_3|NC_019729.1_5745926_5746163_-	NA	NA|78aa|up_2|NC_019729.1_5746476_5746710_-	NA	NA|89aa|up_1|NC_019729.1_5746892_5747159_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|70aa|up_0|NC_019729.1_5747155_5747365_-	NA	NA|78aa|down_0|NC_019729.1_5747711_5747945_-	NA	NA|100aa|down_1|NC_019729.1_5748044_5748344_+	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	NA|74aa|down_2|NC_019729.1_5748413_5748635_-	NA	NA|71aa|down_3|NC_019729.1_5748775_5748988_+	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	NA|69aa|down_4|NC_019729.1_5749163_5749370_+	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	NA|54aa|down_5|NC_019729.1_5749350_5749512_+	NA	NA|395aa|down_6|NC_019729.1_5749487_5750672_+	cd08014, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|460aa|down_7|NC_019729.1_5750829_5752209_+	pfam13191, AAA_16, AAA ATPase domain	NA|931aa|down_8|NC_019729.1_5752213_5755006_+	pfam13424, TPR_12, Tetratricopeptide repeat	cas14j|412aa|down_9|NC_019729.1_5755112_5756348_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	52	5775450-5775595	51	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	TTCAATCTCCCATCTAAAATCTAAAATCTAAAATAGAATTACCCTCC	47	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|91aa|up_7|NC_019729.1_5766115_5766388_-,NA|47aa|up_6|NC_019729.1_5766873_5767014_-,NA|356aa|up_2|NC_019729.1_5770750_5771817_-,NA|64aa|down_3|NC_019729.1_5777509_5777701_-,NA|88aa|down_8|NC_019729.1_5781750_5782014_+,NA|54aa|down_9|NC_019729.1_5782088_5782250_+	NA|121aa|up_9|NC_019729.1_5765147_5765510_-	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|61aa|up_8|NC_019729.1_5765497_5765680_-	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated	NA|91aa|up_7|NC_019729.1_5766115_5766388_-	NA	NA|47aa|up_6|NC_019729.1_5766873_5767014_-	NA	NA|200aa|up_5|NC_019729.1_5767289_5767889_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|322aa|up_4|NC_019729.1_5768317_5769283_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|213aa|up_3|NC_019729.1_5769576_5770215_+	cd19368, TenA_C_AtTH2-like, TenA_C family similar to the N-terminal TenA_C domain of Arabidopsis thaliana thiamine requiring 2	NA|356aa|up_2|NC_019729.1_5770750_5771817_-	NA	NA|256aa|up_1|NC_019729.1_5771925_5772694_+	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease	NA|339aa|up_0|NC_019729.1_5774212_5775229_-	COG5607, COG5607, Uncharacterized conserved protein [Function unknown]	NA|113aa|down_0|NC_019729.1_5775763_5776102_-	PRK13697, PRK13697, cytochrome c6; Provisional	NA|167aa|down_1|NC_019729.1_5776227_5776728_-	PRK13621, psbV, cytochrome c-550; Provisional	NA|163aa|down_2|NC_019729.1_5776875_5777364_-	TIGR03045, Cytochrome_c-550, cytochrome c-550	NA|64aa|down_3|NC_019729.1_5777509_5777701_-	NA	NA|317aa|down_4|NC_019729.1_5778085_5779036_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|74aa|down_5|NC_019729.1_5779165_5779387_-	pfam09413, DUF2007, Putative prokaryotic signal transducing protein	NA|277aa|down_6|NC_019729.1_5779448_5780279_-	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain	NA|159aa|down_7|NC_019729.1_5780953_5781430_-	pfam13565, HTH_32, Homeodomain-like domain	NA|88aa|down_8|NC_019729.1_5781750_5782014_+	NA	NA|54aa|down_9|NC_019729.1_5782088_5782250_+	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	53	5824369-5824479	52	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AAAAAAACTCAATGTTATTGTGGAACGGGCTTCTAGCCCGT	41	1	16	5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438|5824410-5824438	NC_019729.1_5824341-5824369|NC_019729.1_1094383-1094411|NC_019729.1_1094455-1094427|NC_019729.1_3238073-3238101|NC_019729.1_3727399-3727427|NC_019729.1_1449733-1449761|NC_019729.1_1449821-1449849|NC_019729.1_1648790-1648762|NC_019729.1_1848303-1848275|NC_019729.1_2216249-2216277|NC_019729.1_2440241-2440269|NC_019729.1_3921755-3921783|NC_019729.1_4990862-4990890|NC_019729.1_5476388-5476416|NC_019729.1_7198698-7198670|NC_019729.1_7239027-7239055	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|249aa|up_9|NC_019729.1_5813152_5813899_+,NA|121aa|up_7|NC_019729.1_5815365_5815728_-,NA|61aa|down_5|NC_019729.1_5830090_5830273_-,NA|78aa|down_7|NC_019729.1_5833379_5833613_+,NA|143aa|down_8|NC_019729.1_5834339_5834768_-	NA|249aa|up_9|NC_019729.1_5813152_5813899_+	NA	NA|341aa|up_8|NC_019729.1_5813988_5815011_-	sd00006, TPR, Tetratricopeptide repeat	NA|121aa|up_7|NC_019729.1_5815365_5815728_-	NA	NA|227aa|up_6|NC_019729.1_5816145_5816826_+	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|292aa|up_5|NC_019729.1_5817085_5817961_+	PRK00085, recO, DNA repair protein RecO; Reviewed	NA|524aa|up_4|NC_019729.1_5818185_5819757_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|409aa|up_3|NC_019729.1_5819783_5821010_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|560aa|up_2|NC_019729.1_5821074_5822754_-	COG2898, COG2898, Uncharacterized conserved protein [Function unknown]	NA|307aa|up_1|NC_019729.1_5822765_5823686_-	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|143aa|up_0|NC_019729.1_5823867_5824296_+	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|304aa|down_0|NC_019729.1_5824522_5825434_+	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	NA|93aa|down_1|NC_019729.1_5825485_5825764_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|90aa|down_2|NC_019729.1_5825750_5826020_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|102aa|down_3|NC_019729.1_5826363_5826669_-	pfam13319, DUF4090, Protein of unknown function (DUF4090)	NA|1059aa|down_4|NC_019729.1_5826894_5830071_-	cd09179, PLDc_N_DEXD_a, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain	NA|61aa|down_5|NC_019729.1_5830090_5830273_-	NA	NA|919aa|down_6|NC_019729.1_5830551_5833308_-	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair]	NA|78aa|down_7|NC_019729.1_5833379_5833613_+	NA	NA|143aa|down_8|NC_019729.1_5834339_5834768_-	NA	NA|1081aa|down_9|NC_019729.1_5835080_5838323_-	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	54	5833416-5833506	53	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	TGGGCTTCTAGCCCGCCCCCAACAG	25	1	1	5833441-5833481	NC_019729.1_3753337-3753297	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|70aa|up_7|NC_019729.1_5824307_5824517_+,NA|61aa|up_1|NC_019729.1_5830090_5830273_-,NA|143aa|down_0|NC_019729.1_5834339_5834768_-,NA|467aa|down_7|NC_019729.1_5844697_5846098_+	NA|307aa|up_9|NC_019729.1_5822765_5823686_-	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|143aa|up_8|NC_019729.1_5823867_5824296_+	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|70aa|up_7|NC_019729.1_5824307_5824517_+	NA	NA|304aa|up_6|NC_019729.1_5824522_5825434_+	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	NA|93aa|up_5|NC_019729.1_5825485_5825764_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|90aa|up_4|NC_019729.1_5825750_5826020_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|102aa|up_3|NC_019729.1_5826363_5826669_-	pfam13319, DUF4090, Protein of unknown function (DUF4090)	NA|1059aa|up_2|NC_019729.1_5826894_5830071_-	cd09179, PLDc_N_DEXD_a, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain	NA|61aa|up_1|NC_019729.1_5830090_5830273_-	NA	NA|919aa|up_0|NC_019729.1_5830551_5833308_-	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair]	NA|143aa|down_0|NC_019729.1_5834339_5834768_-	NA	NA|1081aa|down_1|NC_019729.1_5835080_5838323_-	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|322aa|down_2|NC_019729.1_5838442_5839408_-	PRK07048, PRK07048, threo-3-hydroxy-L-aspartate ammonia-lyase	NA|307aa|down_3|NC_019729.1_5839654_5840575_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|338aa|down_4|NC_019729.1_5840771_5841785_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|531aa|down_5|NC_019729.1_5842248_5843841_+	PRK14096, pgi, glucose-6-phosphate isomerase; Provisional	NA|245aa|down_6|NC_019729.1_5843904_5844639_+	cd19927, REC_Ycf29, phosphoacceptor receiver (REC) domain of probable transcriptional regulator Ycf29	NA|467aa|down_7|NC_019729.1_5844697_5846098_+	NA	NA|167aa|down_8|NC_019729.1_5846099_5846600_-	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|117aa|down_9|NC_019729.1_5846924_5847275_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	55	5851097-5851196	54	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AAACATAAAATTGGCGCGATGTCTGT	26	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|467aa|up_4|NC_019729.1_5844697_5846098_+,NA|75aa|down_9|NC_019729.1_5868662_5868887_-	NA|322aa|up_9|NC_019729.1_5838442_5839408_-	PRK07048, PRK07048, threo-3-hydroxy-L-aspartate ammonia-lyase	NA|307aa|up_8|NC_019729.1_5839654_5840575_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|338aa|up_7|NC_019729.1_5840771_5841785_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|531aa|up_6|NC_019729.1_5842248_5843841_+	PRK14096, pgi, glucose-6-phosphate isomerase; Provisional	NA|245aa|up_5|NC_019729.1_5843904_5844639_+	cd19927, REC_Ycf29, phosphoacceptor receiver (REC) domain of probable transcriptional regulator Ycf29	NA|467aa|up_4|NC_019729.1_5844697_5846098_+	NA	NA|167aa|up_3|NC_019729.1_5846099_5846600_-	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|117aa|up_2|NC_019729.1_5846924_5847275_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|319aa|up_1|NC_019729.1_5847337_5848294_-	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase	NA|519aa|up_0|NC_019729.1_5848444_5850001_-	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|239aa|down_0|NC_019729.1_5851219_5851936_+	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|340aa|down_1|NC_019729.1_5852126_5853146_+	PRK07403, PRK07403, type I glyceraldehyde-3-phosphate dehydrogenase	NA|318aa|down_2|NC_019729.1_5853816_5854770_+	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|332aa|down_3|NC_019729.1_5855236_5856232_+	pfam03385, STELLO, STELLO glycosyltransferases	NA|1340aa|down_4|NC_019729.1_5856327_5860347_+	sd00006, TPR, Tetratricopeptide repeat	NA|332aa|down_5|NC_019729.1_5860361_5861357_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|227aa|down_6|NC_019729.1_5861522_5862203_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|755aa|down_7|NC_019729.1_5862728_5864993_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1156aa|down_8|NC_019729.1_5865138_5868606_+	sd00006, TPR, Tetratricopeptide repeat	NA|75aa|down_9|NC_019729.1_5868662_5868887_-	NA
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	56	5969579-5969734	11	PILER-CR	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AAGCCCCCCCTTAGCAAGGGGGAGTTGGAGGGGTTATCAA	40	0	0	NA	NA	NA	2	2	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|146aa|up_8|NC_019729.1_5958400_5958838_-,NA|61aa|up_7|NC_019729.1_5959211_5959394_-,NA|73aa|up_5|NC_019729.1_5961728_5961947_+,NA|445aa|up_2|NC_019729.1_5964012_5965347_-,NA|67aa|down_0|NC_019729.1_5971296_5971497_+,NA|493aa|down_1|NC_019729.1_5971652_5973131_+,NA|169aa|down_6|NC_019729.1_5976704_5977211_-	NA|501aa|up_9|NC_019729.1_5956777_5958280_+	COG2215, COG2215, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|146aa|up_8|NC_019729.1_5958400_5958838_-	NA	NA|61aa|up_7|NC_019729.1_5959211_5959394_-	NA	NA|538aa|up_6|NC_019729.1_5959765_5961379_+	pfam07444, Ycf66_N, Ycf66 protein N-terminus	NA|73aa|up_5|NC_019729.1_5961728_5961947_+	NA	NA|489aa|up_4|NC_019729.1_5961993_5963460_+	PRK00784, PRK00784, cobyric acid synthase	NA|79aa|up_3|NC_019729.1_5963549_5963786_+	cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain	NA|445aa|up_2|NC_019729.1_5964012_5965347_-	NA	NA|263aa|up_1|NC_019729.1_5965444_5966233_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|356aa|up_0|NC_019729.1_5966477_5967544_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	NA|67aa|down_0|NC_019729.1_5971296_5971497_+	NA	NA|493aa|down_1|NC_019729.1_5971652_5973131_+	NA	NA|260aa|down_2|NC_019729.1_5973235_5974015_-	TIGR03069, RNA-binding_S4_domain-containing_protein, photosystem II S4 domain protein	NA|349aa|down_3|NC_019729.1_5974186_5975233_+	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair]	NA|244aa|down_4|NC_019729.1_5975229_5975961_+	pfam04555, XhoI, Restriction endonuclease XhoI	NA|197aa|down_5|NC_019729.1_5976036_5976627_-	pfam05685, Uma2, Putative restriction endonuclease	NA|169aa|down_6|NC_019729.1_5976704_5977211_-	NA	NA|528aa|down_7|NC_019729.1_5977500_5979084_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|297aa|down_8|NC_019729.1_5979268_5980159_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|161aa|down_9|NC_019729.1_5980253_5980736_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	57	6082551-6082648	55	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	GATTGGGAAAGATTGACTGAGTAG	24	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|83aa|up_8|NC_019729.1_6073120_6073369_-,NA|124aa|up_6|NC_019729.1_6075696_6076068_+,NA|82aa|up_1|NC_019729.1_6079021_6079267_-,NA|224aa|down_0|NC_019729.1_6082758_6083430_+	NA|825aa|up_9|NC_019729.1_6069113_6071588_-	PRK05261, PRK05261, phosphoketolase	NA|83aa|up_8|NC_019729.1_6073120_6073369_-	NA	NA|499aa|up_7|NC_019729.1_6073968_6075465_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|124aa|up_6|NC_019729.1_6075696_6076068_+	NA	NA|148aa|up_5|NC_019729.1_6076073_6076517_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|227aa|up_4|NC_019729.1_6076513_6077194_-	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|445aa|up_3|NC_019729.1_6077190_6078525_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|151aa|up_2|NC_019729.1_6078578_6079031_-	pfam01844, HNH, HNH endonuclease	NA|82aa|up_1|NC_019729.1_6079021_6079267_-	NA	NA|912aa|up_0|NC_019729.1_6079461_6082197_-	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|224aa|down_0|NC_019729.1_6082758_6083430_+	NA	NA|469aa|down_1|NC_019729.1_6089003_6090410_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|462aa|down_2|NC_019729.1_6090406_6091792_+	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains	NA|337aa|down_3|NC_019729.1_6092054_6093065_+	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only]	NA|695aa|down_4|NC_019729.1_6093528_6095613_-	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|331aa|down_5|NC_019729.1_6095609_6096602_-	cd13563, PBP2_SsuA_like_6, Putative substrate binding domain of sulfonate binding protein-like, a member of the type 2 periplasmic binding protein fold	NA|82aa|down_6|NC_019729.1_6096607_6096853_-	PRK14968, PRK14968, putative methyltransferase; Provisional	NA|524aa|down_7|NC_019729.1_6097263_6098835_+	PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit N	NA|200aa|down_8|NC_019729.1_6098988_6099588_+	cd06260, DUF820, Domain of unknown function (DUF820)	NA|537aa|down_9|NC_019729.1_6099734_6101345_+	TIGR01194, ATP-binding_protein_SyrD, cyclic peptide transporter
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	58	6125700-6130855	56,8,12	CRISPRCasFinder,CRT,PILER-CR	no	Cas14c_CAS-V-F	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGC,GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGC,GCCGGAAAAAACCTAAAACCCTATCAGGGATTGAAAC	37,37,37	0	0	NA	NA	I-D,II-B:I-D,II-B:I-D,II-B	70,70,69	70	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA	NA|126aa|up_9|NC_019729.1_6115622_6116000_-	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|177aa|up_8|NC_019729.1_6116237_6116768_-	sd00006, TPR, Tetratricopeptide repeat	NA|119aa|up_7|NC_019729.1_6117040_6117397_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|66aa|up_6|NC_019729.1_6117416_6117614_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|213aa|up_5|NC_019729.1_6117898_6118537_+	pfam12102, DUF3578, Domain of unknown function (DUF3578)	NA|118aa|up_4|NC_019729.1_6118543_6118897_+	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms]	NA|149aa|up_3|NC_019729.1_6119576_6120023_-	TIGR03698, clan_AA_DTGF, clan AA aspartic protease, AF_0612 family	NA|346aa|up_2|NC_019729.1_6120255_6121293_-	CHL00149, odpA, pyruvate dehydrogenase E1 component alpha subunit; Reviewed	NA|773aa|up_1|NC_019729.1_6121739_6124058_+	pfam13355, DUF4101, Protein of unknown function (DUF4101)	NA|401aa|up_0|NC_019729.1_6124488_6125691_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|249aa|down_0|NC_019729.1_6131944_6132691_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|300aa|down_1|NC_019729.1_6132790_6133690_+	PRK07400, PRK07400, 30S ribosomal protein S1; Reviewed	NA|744aa|down_2|NC_019729.1_6135612_6137844_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|477aa|down_3|NC_019729.1_6137865_6139296_-	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains    SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]	NA|452aa|down_4|NC_019729.1_6139329_6140685_+	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|722aa|down_5|NC_019729.1_6140907_6143073_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|427aa|down_6|NC_019729.1_6143235_6144516_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|421aa|down_7|NC_019729.1_6144853_6146116_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|254aa|down_8|NC_019729.1_6146923_6147685_-	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family	NA|349aa|down_9|NC_019729.1_6147967_6149014_+	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	59	6543961-6544108	57	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AAGCATCCAGGATACAAGCCCCCGGATTCATCTCGCGCAAGTCAATGCTTCA	52	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|53aa|up_4|NC_019729.1_6533989_6534148_+,NA|120aa|up_3|NC_019729.1_6534499_6534859_+,NA|139aa|up_0|NC_019729.1_6543276_6543693_-,NA|136aa|down_0|NC_019729.1_6544377_6544785_+,NA|471aa|down_2|NC_019729.1_6547565_6548978_-,NA|342aa|down_3|NC_019729.1_6549055_6550081_+	NA|276aa|up_9|NC_019729.1_6528165_6528993_+	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|242aa|up_8|NC_019729.1_6528946_6529672_+	cd16433, CheB, Chemotaxis response regulator protein-glutamate methylesterase, CheB	NA|686aa|up_7|NC_019729.1_6529679_6531737_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|276aa|up_6|NC_019729.1_6532157_6532985_+	PRK12896, PRK12896, methionine aminopeptidase; Reviewed	NA|231aa|up_5|NC_019729.1_6533190_6533883_+	cd19927, REC_Ycf29, phosphoacceptor receiver (REC) domain of probable transcriptional regulator Ycf29	NA|53aa|up_4|NC_019729.1_6533989_6534148_+	NA	NA|120aa|up_3|NC_019729.1_6534499_6534859_+	NA	NA|1736aa|up_2|NC_019729.1_6535389_6540597_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|762aa|up_1|NC_019729.1_6540841_6543127_+	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c	NA|139aa|up_0|NC_019729.1_6543276_6543693_-	NA	NA|136aa|down_0|NC_019729.1_6544377_6544785_+	NA	NA|848aa|down_1|NC_019729.1_6544778_6547322_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|471aa|down_2|NC_019729.1_6547565_6548978_-	NA	NA|342aa|down_3|NC_019729.1_6549055_6550081_+	NA	NA|108aa|down_4|NC_019729.1_6550248_6550572_-	COG5548, COG5548, Small integral membrane protein [Function unknown]	NA|435aa|down_5|NC_019729.1_6550698_6552003_+	pfam05673, DUF815, Protein of unknown function (DUF815)	NA|149aa|down_6|NC_019729.1_6552241_6552688_+	cd07176, terB, tellurite resistance protein terB	NA|142aa|down_7|NC_019729.1_6552841_6553267_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|324aa|down_8|NC_019729.1_6553458_6554430_+	PRK06249, PRK06249, putative 2-dehydropantoate 2-reductase	NA|474aa|down_9|NC_019729.1_6554556_6555978_-	PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	60	6575143-6575238	58	CRISPRCasFinder	no	WYL,cas10d,csc2gr7,csc1gr5,cas3,cas6,cas4,cas1,cas2	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-D	AACGTAAAACCCATAGTCTGCCAG	24	0	0	NA	NA	NA	1	1	TypeI-D	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|72aa|up_7|NC_019729.1_6564684_6564900_+,cas10d|914aa|up_3|NC_019729.1_6567290_6570032_+,NA|86aa|down_5|NC_019729.1_6580874_6581132_-	NA|646aa|up_9|NC_019729.1_6562046_6563984_+	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|105aa|up_8|NC_019729.1_6564105_6564420_-	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|72aa|up_7|NC_019729.1_6564684_6564900_+	NA	WYL|284aa|up_6|NC_019729.1_6565073_6565925_-	pfam13280, WYL, WYL domain	NA|152aa|up_5|NC_019729.1_6566349_6566805_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|143aa|up_4|NC_019729.1_6566801_6567230_+	pfam01934, DUF86, Protein of unknown function DUF86	cas10d|914aa|up_3|NC_019729.1_6567290_6570032_+	NA	csc2gr7|339aa|up_2|NC_019729.1_6570043_6571060_+	pfam18320, Csc2, Csc2 Crispr	csc1gr5|268aa|up_1|NC_019729.1_6571236_6572040_+	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1	cas3|759aa|up_0|NC_019729.1_6572020_6574297_+	TIGR03158, cas3_cyano, CRISPR-associated helicase Cas3, subtype CYANO	cas4|198aa|down_0|NC_019729.1_6575565_6576159_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|334aa|down_1|NC_019729.1_6576186_6577188_+	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas2|92aa|down_2|NC_019729.1_6577190_6577466_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|52aa|down_3|NC_019729.1_6579284_6579440_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|373aa|down_4|NC_019729.1_6579564_6580683_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|86aa|down_5|NC_019729.1_6580874_6581132_-	NA	NA|336aa|down_6|NC_019729.1_6581213_6582221_+	PRK07453, PRK07453, protochlorophyllide reductase	NA|721aa|down_7|NC_019729.1_6582855_6585018_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|206aa|down_8|NC_019729.1_6585161_6585779_+	pfam05685, Uma2, Putative restriction endonuclease	NA|983aa|down_9|NC_019729.1_6585885_6588834_+	COG3210, FhaB, Large exoproteins involved in heme utilization or adhesion [Intracellular trafficking and secretion]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	61	6575290-6575472	13	PILER-CR	no	WYL,cas10d,csc2gr7,csc1gr5,cas3,cas6,cas4,cas1,cas2	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-D	TCATCAATGATTAAATTACTTCTTCAGTCGGTTTCAACC	39	0	0	NA	NA	NA	2	2	TypeI-D	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|72aa|up_8|NC_019729.1_6564684_6564900_+,cas10d|914aa|up_4|NC_019729.1_6567290_6570032_+,NA|86aa|down_5|NC_019729.1_6580874_6581132_-	NA|105aa|up_9|NC_019729.1_6564105_6564420_-	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|72aa|up_8|NC_019729.1_6564684_6564900_+	NA	WYL|284aa|up_7|NC_019729.1_6565073_6565925_-	pfam13280, WYL, WYL domain	NA|152aa|up_6|NC_019729.1_6566349_6566805_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|143aa|up_5|NC_019729.1_6566801_6567230_+	pfam01934, DUF86, Protein of unknown function DUF86	cas10d|914aa|up_4|NC_019729.1_6567290_6570032_+	NA	csc2gr7|339aa|up_3|NC_019729.1_6570043_6571060_+	pfam18320, Csc2, Csc2 Crispr	csc1gr5|268aa|up_2|NC_019729.1_6571236_6572040_+	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1	cas3|759aa|up_1|NC_019729.1_6572020_6574297_+	TIGR03158, cas3_cyano, CRISPR-associated helicase Cas3, subtype CYANO	cas6|281aa|up_0|NC_019729.1_6574300_6575143_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas4|198aa|down_0|NC_019729.1_6575565_6576159_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|334aa|down_1|NC_019729.1_6576186_6577188_+	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas2|92aa|down_2|NC_019729.1_6577190_6577466_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|52aa|down_3|NC_019729.1_6579284_6579440_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|373aa|down_4|NC_019729.1_6579564_6580683_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|86aa|down_5|NC_019729.1_6580874_6581132_-	NA	NA|336aa|down_6|NC_019729.1_6581213_6582221_+	PRK07453, PRK07453, protochlorophyllide reductase	NA|721aa|down_7|NC_019729.1_6582855_6585018_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|206aa|down_8|NC_019729.1_6585161_6585779_+	pfam05685, Uma2, Putative restriction endonuclease	NA|983aa|down_9|NC_019729.1_6585885_6588834_+	COG3210, FhaB, Large exoproteins involved in heme utilization or adhesion [Intracellular trafficking and secretion]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	62	6577718-6579210	14,59,9,15	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	WYL,cas10d,csc2gr7,csc1gr5,cas3,cas6,cas4,cas1,cas2	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Type I-D	GCCGAAATAAACCTAAAACCCTATCAGGGATTGAAAC,GCCGAAATAAACCTAAAACCCTATCAGGGATTGAAAC,GCCGAAATAAACCTAAAACCCTATCAGGGATTGAAAC,GCCGAAATAAACCTAAAACCCTATCAGGGATTGAAAC	37,37,37,37	0	0	NA	NA	I-D,II-B:I-D,II-B:I-D,II-B:I-D,II-B	18,20,20,18	20	TypeI-D	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	cas10d|914aa|up_7|NC_019729.1_6567290_6570032_+,NA|86aa|down_2|NC_019729.1_6580874_6581132_-	NA|152aa|up_9|NC_019729.1_6566349_6566805_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|143aa|up_8|NC_019729.1_6566801_6567230_+	pfam01934, DUF86, Protein of unknown function DUF86	cas10d|914aa|up_7|NC_019729.1_6567290_6570032_+	NA	csc2gr7|339aa|up_6|NC_019729.1_6570043_6571060_+	pfam18320, Csc2, Csc2 Crispr	csc1gr5|268aa|up_5|NC_019729.1_6571236_6572040_+	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1	cas3|759aa|up_4|NC_019729.1_6572020_6574297_+	TIGR03158, cas3_cyano, CRISPR-associated helicase Cas3, subtype CYANO	cas6|281aa|up_3|NC_019729.1_6574300_6575143_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas4|198aa|up_2|NC_019729.1_6575565_6576159_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|334aa|up_1|NC_019729.1_6576186_6577188_+	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas2|92aa|up_0|NC_019729.1_6577190_6577466_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|52aa|down_0|NC_019729.1_6579284_6579440_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|373aa|down_1|NC_019729.1_6579564_6580683_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|86aa|down_2|NC_019729.1_6580874_6581132_-	NA	NA|336aa|down_3|NC_019729.1_6581213_6582221_+	PRK07453, PRK07453, protochlorophyllide reductase	NA|721aa|down_4|NC_019729.1_6582855_6585018_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|206aa|down_5|NC_019729.1_6585161_6585779_+	pfam05685, Uma2, Putative restriction endonuclease	NA|983aa|down_6|NC_019729.1_6585885_6588834_+	COG3210, FhaB, Large exoproteins involved in heme utilization or adhesion [Intracellular trafficking and secretion]	NA|974aa|down_7|NC_019729.1_6589002_6591924_+	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain	NA|872aa|down_8|NC_019729.1_6592044_6594660_+	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown]	NA|314aa|down_9|NC_019729.1_6594922_6595864_+	pfam04240, Caroten_synth, Carotenoid biosynthesis protein
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	63	6943851-6944038	60	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	TTGCTTTGGCTTGATTGATTTGTTCT	26	0	0	NA	NA	NA	3	3	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|174aa|up_7|NC_019729.1_6934694_6935216_-,NA|304aa|up_5|NC_019729.1_6938193_6939105_+,NA|68aa|up_3|NC_019729.1_6940346_6940550_+,NA|51aa|up_2|NC_019729.1_6940632_6940785_-,NA|139aa|down_3|NC_019729.1_6947150_6947567_-,NA|272aa|down_4|NC_019729.1_6947755_6948571_-,NA|145aa|down_5|NC_019729.1_6948672_6949107_-,NA|63aa|down_7|NC_019729.1_6951191_6951380_-	NA|230aa|up_9|NC_019729.1_6932430_6933120_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|448aa|up_8|NC_019729.1_6933129_6934473_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|174aa|up_7|NC_019729.1_6934694_6935216_-	NA	NA|694aa|up_6|NC_019729.1_6935572_6937654_-	PRK14948, PRK14948, DNA polymerase III subunit gamma/tau	NA|304aa|up_5|NC_019729.1_6938193_6939105_+	NA	NA|241aa|up_4|NC_019729.1_6939131_6939854_-	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family	NA|68aa|up_3|NC_019729.1_6940346_6940550_+	NA	NA|51aa|up_2|NC_019729.1_6940632_6940785_-	NA	NA|287aa|up_1|NC_019729.1_6940934_6941795_-	pfam05685, Uma2, Putative restriction endonuclease	NA|387aa|up_0|NC_019729.1_6941933_6943094_-	TIGR01185, membrane_spanning_subunit, DevC protein	NA|246aa|down_0|NC_019729.1_6945077_6945815_-	PRK02816, PRK02816, phycocyanobilin:ferredoxin oxidoreductase; Validated	NA|66aa|down_1|NC_019729.1_6945943_6946141_+	PRK14857, tatA, TatA/E family twin arginine-targeting protein translocase	NA|259aa|down_2|NC_019729.1_6946202_6946979_-	pfam02548, Pantoate_transf, Ketopantoate hydroxymethyltransferase	NA|139aa|down_3|NC_019729.1_6947150_6947567_-	NA	NA|272aa|down_4|NC_019729.1_6947755_6948571_-	NA	NA|145aa|down_5|NC_019729.1_6948672_6949107_-	NA	NA|586aa|down_6|NC_019729.1_6949171_6950929_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|63aa|down_7|NC_019729.1_6951191_6951380_-	NA	NA|477aa|down_8|NC_019729.1_6951540_6952971_+	CHL00040, rbcL, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	NA|137aa|down_9|NC_019729.1_6953108_6953519_+	pfam02341, RcbX, RbcX protein
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	64	6967218-6967673	10	CRT	no	cas14j	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	GATCGAGCCGCCTGTTGATATTGACCCGATCGTCCCGACACC	42	2	16	6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967260-6967283|6967464-6967481|6967464-6967481|6967464-6967481|6967464-6967481|6967464-6967481|6967464-6967481	NC_019729.1_1041230-1041207|NC_019729.1_1041263-1041240|NC_019729.1_5363291-5363314|NC_019729.1_1027038-1027015|NC_019729.1_1027050-1027027|NC_019729.1_1041167-1041144|NC_019729.1_5015443-5015420|NC_019729.1_5015449-5015426|NC_019729.1_5015455-5015432|NC_019729.1_5357338-5357361|NC_019729.1_1746781-1746764|NC_019729.1_5015401-5015384|NC_019729.1_5015425-5015408|NC_019729.1_5015461-5015444|NC_019729.1_6804763-6804746|NC_019729.1_6804799-6804782	NA	6	6	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|408aa|up_9|NC_019729.1_6955406_6956630_-,NA|90aa|up_8|NC_019729.1_6956850_6957120_+,NA|125aa|up_7|NC_019729.1_6957247_6957622_-,NA|223aa|up_0|NC_019729.1_6965732_6966401_-,NA|63aa|down_3|NC_019729.1_6972367_6972556_+	NA|408aa|up_9|NC_019729.1_6955406_6956630_-	NA	NA|90aa|up_8|NC_019729.1_6956850_6957120_+	NA	NA|125aa|up_7|NC_019729.1_6957247_6957622_-	NA	NA|412aa|up_6|NC_019729.1_6958185_6959421_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|685aa|up_5|NC_019729.1_6960222_6962277_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|190aa|up_4|NC_019729.1_6962433_6963003_+	pfam05685, Uma2, Putative restriction endonuclease	NA|178aa|up_3|NC_019729.1_6963010_6963544_-	PRK00039, ruvC, Holliday junction resolvase; Reviewed	NA|372aa|up_2|NC_019729.1_6963639_6964755_-	CHL00081, chlI, Mg-protoporyphyrin IX chelatase	NA|212aa|up_1|NC_019729.1_6965159_6965795_+	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain	NA|223aa|up_0|NC_019729.1_6965732_6966401_-	NA	NA|254aa|down_0|NC_019729.1_6970807_6971569_+	TIGR04500, PpiC_rel_mature, putative peptide maturation system protein	NA|129aa|down_1|NC_019729.1_6971663_6972050_-	cd18738, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|83aa|down_2|NC_019729.1_6972036_6972285_-	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|63aa|down_3|NC_019729.1_6972367_6972556_+	NA	NA|73aa|down_4|NC_019729.1_6972612_6972831_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|128aa|down_5|NC_019729.1_6972944_6973328_+	pfam14237, DUF4339, Domain of unknown function (DUF4339)	NA|887aa|down_6|NC_019729.1_6974024_6976685_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|312aa|down_7|NC_019729.1_6976935_6977871_+	cd01144, BtuF, Cobalamin binding protein BtuF	NA|203aa|down_8|NC_019729.1_6978208_6978817_-	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]	NA|261aa|down_9|NC_019729.1_6978983_6979766_-	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	65	7311290-7311389	61	CRISPRCasFinder	no	RT	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Unclear	CCCGCCGGCAACAATTTCTCTTTCT	25	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|714aa|up_3|NC_019729.1_7305247_7307389_-,NA|140aa|up_0|NC_019729.1_7309746_7310166_-,NA|69aa|down_1|NC_019729.1_7313329_7313536_-,NA|293aa|down_4|NC_019729.1_7318163_7319042_+,NA|195aa|down_8|NC_019729.1_7322575_7323160_-	NA|87aa|up_9|NC_019729.1_7300608_7300869_+	cd16395, Srx, Sulfiredoxin reactivates peroxiredoxins after oxidative inactivation	NA|183aa|up_8|NC_019729.1_7300939_7301488_+	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional	NA|235aa|up_7|NC_019729.1_7301532_7302237_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|109aa|up_6|NC_019729.1_7302476_7302803_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|379aa|up_5|NC_019729.1_7302859_7303996_-	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|146aa|up_4|NC_019729.1_7304470_7304908_+	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain	NA|714aa|up_3|NC_019729.1_7305247_7307389_-	NA	NA|206aa|up_2|NC_019729.1_7308298_7308916_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|180aa|up_1|NC_019729.1_7309018_7309558_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)	NA|140aa|up_0|NC_019729.1_7309746_7310166_-	NA	NA|259aa|down_0|NC_019729.1_7312400_7313177_-	pfam07082, DUF1350, Protein of unknown function (DUF1350)	NA|69aa|down_1|NC_019729.1_7313329_7313536_-	NA	NA|347aa|down_2|NC_019729.1_7313653_7314694_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|576aa|down_3|NC_019729.1_7315922_7317650_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|293aa|down_4|NC_019729.1_7318163_7319042_+	NA	NA|406aa|down_5|NC_019729.1_7319487_7320705_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|283aa|down_6|NC_019729.1_7320813_7321662_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|242aa|down_7|NC_019729.1_7321857_7322583_-	pfam11318, DUF3120, Protein of unknown function (DUF3120)	NA|195aa|down_8|NC_019729.1_7322575_7323160_-	NA	NA|423aa|down_9|NC_019729.1_7323871_7325140_+	COG0276, HemH, Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	66	7410696-7410797	62	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	AGAACGGGCAAGATGCCCGTTCCACAAGAA	30	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|125aa|up_4|NC_019729.1_7405417_7405792_+,NA	NA|261aa|up_9|NC_019729.1_7392743_7393526_+	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|787aa|up_8|NC_019729.1_7398800_7401161_+	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|471aa|up_7|NC_019729.1_7401491_7402904_+	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|387aa|up_6|NC_019729.1_7402910_7404071_+	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily	NA|234aa|up_5|NC_019729.1_7404470_7405172_-	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|125aa|up_4|NC_019729.1_7405417_7405792_+	NA	NA|472aa|up_3|NC_019729.1_7405896_7407312_+	COG1316, LytR, Transcriptional regulator [Transcription]	NA|143aa|up_2|NC_019729.1_7407533_7407962_+	COG2149, COG2149, Predicted membrane protein [Function unknown]	NA|513aa|up_1|NC_019729.1_7408154_7409693_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|228aa|up_0|NC_019729.1_7409689_7410373_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|328aa|down_0|NC_019729.1_7411336_7412320_+	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|305aa|down_1|NC_019729.1_7412493_7413408_-	PLN02824, PLN02824, hydrolase, alpha/beta fold family protein	NA|310aa|down_2|NC_019729.1_7413657_7414587_+	cd11593, Agmatinase-like_2, Agmatinase and related proteins	NA|186aa|down_3|NC_019729.1_7414720_7415278_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|267aa|down_4|NC_019729.1_7415508_7416309_+	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold	NA|606aa|down_5|NC_019729.1_7416617_7418435_+	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|133aa|down_6|NC_019729.1_7418525_7418924_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|241aa|down_7|NC_019729.1_7419205_7419928_+	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway)	NA|183aa|down_8|NC_019729.1_7419914_7420463_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|46aa|down_9|NC_019729.1_7420649_7420787_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]
GCF_000317475.1_ASM31747v1	NC_019729	Oscillatoria nigro-viridis PCC 7112, complete sequence	67	7425997-7426156	63	CRISPRCasFinder	no		cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	Orphan	CCGCTGAGGTTCGCGCCGCTGAGGT	25	1	1	7426112-7426131	NC_019729.1_911438-911457	NA	3	3	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA,NA|217aa|down_4|NC_019729.1_7431173_7431824_+,NA|343aa|down_6|NC_019729.1_7434627_7435656_+,NA|86aa|down_8|NC_019729.1_7437042_7437300_+,NA|324aa|down_9|NC_019729.1_7437437_7438409_+	NA|310aa|up_9|NC_019729.1_7413657_7414587_+	cd11593, Agmatinase-like_2, Agmatinase and related proteins	NA|186aa|up_8|NC_019729.1_7414720_7415278_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|267aa|up_7|NC_019729.1_7415508_7416309_+	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold	NA|606aa|up_6|NC_019729.1_7416617_7418435_+	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|133aa|up_5|NC_019729.1_7418525_7418924_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|241aa|up_4|NC_019729.1_7419205_7419928_+	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway)	NA|183aa|up_3|NC_019729.1_7419914_7420463_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|46aa|up_2|NC_019729.1_7420649_7420787_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|151aa|up_1|NC_019729.1_7421728_7422181_+	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins	NA|1002aa|up_0|NC_019729.1_7422550_7425556_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|215aa|down_0|NC_019729.1_7426600_7427245_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|146aa|down_1|NC_019729.1_7428330_7428768_+	pfam13565, HTH_32, Homeodomain-like domain	NA|118aa|down_2|NC_019729.1_7429064_7429418_-	COG1937, COG1937, Uncharacterized protein conserved in bacteria [Function unknown]	NA|415aa|down_3|NC_019729.1_7429695_7430940_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|217aa|down_4|NC_019729.1_7431173_7431824_+	NA	NA|803aa|down_5|NC_019729.1_7431977_7434386_+	PTZ00184, PTZ00184, calmodulin; Provisional	NA|343aa|down_6|NC_019729.1_7434627_7435656_+	NA	NA|472aa|down_7|NC_019729.1_7435657_7437073_+	TIGR00990, Mitochondrial_import_receptor_subunit_TOM70, mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)	NA|86aa|down_8|NC_019729.1_7437042_7437300_+	NA	NA|324aa|down_9|NC_019729.1_7437437_7438409_+	NA
GCF_000317475.1_ASM31747v1	NC_019763	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence	1	40283-40397	1	CRISPRCasFinder	no	cas14j	csa3,cas14j,Cas14u_CAS-V,PD-DExK,cas3	Unclear	CGAACTTCAGCGCCAGATGAAAATCGCCAAGAAA	34	0	0	NA	NA	NA	1	1	TypeV	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|124aa|up_7|NC_019763.1_29498_29870_+,NA|394aa|up_3|NC_019763.1_34578_35760_+,NA|70aa|up_0|NC_019763.1_39775_39985_-,NA|64aa|down_1|NC_019763.1_43971_44163_-,NA|145aa|down_3|NC_019763.1_46344_46779_-	NA|127aa|up_9|NC_019763.1_27699_28080_+	pfam14462, Prok-E2_E, Prokaryotic E2 family E	NA|473aa|up_8|NC_019763.1_28076_29495_+	pfam00899, ThiF, ThiF family	NA|124aa|up_7|NC_019763.1_29498_29870_+	NA	NA|514aa|up_6|NC_019763.1_30635_32177_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|356aa|up_5|NC_019763.1_32176_33244_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|447aa|up_4|NC_019763.1_33236_34577_+	cd17517, RMtype1_S_EcoKI_StySPI-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR),similar to Escherichia coli str	NA|394aa|up_3|NC_019763.1_34578_35760_+	NA	NA|1060aa|up_2|NC_019763.1_35740_38920_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|233aa|up_1|NC_019763.1_38916_39615_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|70aa|up_0|NC_019763.1_39775_39985_-	NA	NA|606aa|down_0|NC_019763.1_40796_42614_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|64aa|down_1|NC_019763.1_43971_44163_-	NA	cas14j|473aa|down_2|NC_019763.1_44694_46113_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|145aa|down_3|NC_019763.1_46344_46779_-	NA	NA|234aa|down_4|NC_019763.1_47076_47778_-	pfam04931, DNA_pol_phi, DNA polymerase phi	NA|529aa|down_5|NC_019763.1_48100_49687_+	CHL00195, ycf46, Ycf46; Provisional	NA|504aa|down_6|NC_019763.1_49789_51301_-	cd09133, PLDc_unchar5, Putative catalytic domain of uncharacterized hypothetical proteins with one or two copies of the HKD motif	NA|1150aa|down_7|NC_019763.1_51297_54747_-	TIGR00376, DNA-binding_protein_SMUBP-2, DNA helicase, putative	NA|599aa|down_8|NC_019763.1_54874_56671_-	cd08639, DNA_pol_A_Aquificae_like, Phylum Aquificae Pol A is different from Escherichia coli  Pol A by three signature sequences	NA|195aa|down_9|NC_019763.1_56864_57449_-	smart00650, rADc, Ribosomal RNA adenine dimethylases
GCF_000317475.1_ASM31747v1	NC_019763	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence	2	229867-229963	2	CRISPRCasFinder	no	cas3	csa3,cas14j,Cas14u_CAS-V,PD-DExK,cas3	Unclear	TTCAACAGGCGTGGGAATTTCCAAT	25	0	0	NA	NA	NA	1	1	Unclear	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|234aa|up_9|NC_019763.1_220210_220912_-,NA|62aa|up_8|NC_019763.1_220973_221159_-,NA|84aa|up_6|NC_019763.1_222048_222300_-,NA|165aa|up_5|NC_019763.1_222342_222837_-,NA|212aa|up_3|NC_019763.1_224069_224705_-,NA|126aa|up_0|NC_019763.1_229283_229661_-,NA|160aa|down_1|NC_019763.1_231654_232134_+,NA|565aa|down_4|NC_019763.1_234229_235924_+,NA|442aa|down_5|NC_019763.1_235947_237273_+,NA|138aa|down_7|NC_019763.1_243139_243553_+,NA|405aa|down_8|NC_019763.1_243562_244777_+	NA|234aa|up_9|NC_019763.1_220210_220912_-	NA	NA|62aa|up_8|NC_019763.1_220973_221159_-	NA	NA|232aa|up_7|NC_019763.1_221349_222045_-	pfam05565, Sipho_Gp157, Siphovirus Gp157	NA|84aa|up_6|NC_019763.1_222048_222300_-	NA	NA|165aa|up_5|NC_019763.1_222342_222837_-	NA	NA|335aa|up_4|NC_019763.1_223033_224038_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|212aa|up_3|NC_019763.1_224069_224705_-	NA	cas3|695aa|up_2|NC_019763.1_224977_227062_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|564aa|up_1|NC_019763.1_227534_229226_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|126aa|up_0|NC_019763.1_229283_229661_-	NA	NA|394aa|down_0|NC_019763.1_230480_231662_+	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|160aa|down_1|NC_019763.1_231654_232134_+	NA	NA|228aa|down_2|NC_019763.1_232494_233178_+	cd05386, TraL, transfer origin protein TraL	NA|177aa|down_3|NC_019763.1_233327_233858_+	pfam06166, DUF979, Protein of unknown function (DUF979)	NA|565aa|down_4|NC_019763.1_234229_235924_+	NA	NA|442aa|down_5|NC_019763.1_235947_237273_+	NA	NA|1929aa|down_6|NC_019763.1_237265_243052_+	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]	NA|138aa|down_7|NC_019763.1_243139_243553_+	NA	NA|405aa|down_8|NC_019763.1_243562_244777_+	NA	NA|1302aa|down_9|NC_019763.1_244841_248747_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]
GCF_000317475.1_ASM31747v1	NC_019731	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.03, complete sequence	1	8878-8974	1	CRISPRCasFinder	no	RT	RT,c2c9_V-U4	Unclear	CAAAGGGCTTGAATTTTGCCCGAT	24	1	1	8902-8950	NC_019731.1_98707-98755	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|89aa|up_7|NC_019731.1_219_486_+,NA|55aa|up_6|NC_019731.1_1016_1181_+,NA|78aa|up_4|NC_019731.1_2565_2799_+,NA|174aa|up_3|NC_019731.1_2802_3324_+,NA|49aa|up_1|NC_019731.1_7066_7213_+,NA|105aa|up_0|NC_019731.1_7874_8189_+,NA|170aa|down_0|NC_019731.1_9717_10227_+,NA|100aa|down_2|NC_019731.1_11483_11783_+	NA|NA	NA	NA|NA	NA	NA|89aa|up_7|NC_019731.1_219_486_+	NA	NA|55aa|up_6|NC_019731.1_1016_1181_+	NA	NA|218aa|up_5|NC_019731.1_1694_2348_+	pfam05685, Uma2, Putative restriction endonuclease	NA|78aa|up_4|NC_019731.1_2565_2799_+	NA	NA|174aa|up_3|NC_019731.1_2802_3324_+	NA	NA|1128aa|up_2|NC_019731.1_3582_6966_+	pfam12965, DUF3854, Domain of unknown function (DUF3854)	NA|49aa|up_1|NC_019731.1_7066_7213_+	NA	NA|105aa|up_0|NC_019731.1_7874_8189_+	NA	NA|170aa|down_0|NC_019731.1_9717_10227_+	NA	NA|229aa|down_1|NC_019731.1_10223_10910_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|100aa|down_2|NC_019731.1_11483_11783_+	NA	NA|2997aa|down_3|NC_019731.1_12842_21833_+	pfam13448, DUF4114, Domain of unknown function (DUF4114)	RT|599aa|down_4|NC_019731.1_22449_24246_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|268aa|down_5|NC_019731.1_24345_25149_+	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease	NA|273aa|down_6|NC_019731.1_25246_26065_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|266aa|down_7|NC_019731.1_26197_26995_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|1221aa|down_8|NC_019731.1_27095_30758_+	cd00091, NUC, DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases	NA|204aa|down_9|NC_019731.1_30884_31496_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]
GCF_000317475.1_ASM31747v1	NC_019731	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.03, complete sequence	2	97369-97461	2	CRISPRCasFinder	no	c2c9_V-U4	RT,c2c9_V-U4	Type V-U4	CACTTGCTCAACTTGATTTTTAATTCAATT	30	0	0	NA	NA	NA	1	1	TypeV-U4	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|207aa|up_9|NC_019731.1_88511_89132_-,NA|148aa|up_7|NC_019731.1_89572_90016_+,NA|61aa|up_6|NC_019731.1_90040_90223_+,NA|77aa|up_4|NC_019731.1_91371_91602_+,NA|53aa|up_2|NC_019731.1_95342_95501_-,NA|117aa|down_0|NC_019731.1_97809_98160_+,NA|57aa|down_1|NC_019731.1_99658_99829_+,NA|170aa|down_2|NC_019731.1_99864_100374_+,NA|229aa|down_3|NC_019731.1_100370_101057_+,NA|100aa|down_4|NC_019731.1_101629_101929_+,NA|62aa|down_5|NC_019731.1_111931_112117_+	NA|207aa|up_9|NC_019731.1_88511_89132_-	NA	NA|80aa|up_8|NC_019731.1_89300_89540_+	pfam07878, RHH_5, CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	NA|148aa|up_7|NC_019731.1_89572_90016_+	NA	NA|61aa|up_6|NC_019731.1_90040_90223_+	NA	NA|212aa|up_5|NC_019731.1_90285_90921_+	pfam05685, Uma2, Putative restriction endonuclease	NA|77aa|up_4|NC_019731.1_91371_91602_+	NA	NA|1041aa|up_3|NC_019731.1_91981_95104_+	COG3378, COG3378, Phage associated DNA primase [General function prediction only]	NA|53aa|up_2|NC_019731.1_95342_95501_-	NA	NA|37aa|up_1|NC_019731.1_95754_95865_+	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	c2c9_V-U4|381aa|up_0|NC_019731.1_96071_97214_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|117aa|down_0|NC_019731.1_97809_98160_+	NA	NA|57aa|down_1|NC_019731.1_99658_99829_+	NA	NA|170aa|down_2|NC_019731.1_99864_100374_+	NA	NA|229aa|down_3|NC_019731.1_100370_101057_+	NA	NA|100aa|down_4|NC_019731.1_101629_101929_+	NA	NA|62aa|down_5|NC_019731.1_111931_112117_+	NA	NA|747aa|down_6|NC_019731.1_112269_114510_+	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]	NA|320aa|down_7|NC_019731.1_114543_115503_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|675aa|down_8|NC_019731.1_115593_117618_+	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]	NA|317aa|down_9|NC_019731.1_117763_118714_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]
GCF_000317475.1_ASM31747v1	NC_019764	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence	1	26887-26969	1	CRISPRCasFinder	no			Orphan	TAGTTTCTGCTCGATCGCTATCT	23	1	1	26910-26946	NC_019764.1_26982-27018	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|113aa|up_7|NC_019764.1_15131_15470_-,NA|347aa|up_3|NC_019764.1_20529_21570_+,NA|209aa|up_2|NC_019764.1_21760_22387_-,NA|708aa|up_1|NC_019764.1_22789_24913_-,NA|74aa|up_0|NC_019764.1_25340_25562_-,NA|61aa|down_0|NC_019764.1_28311_28494_-,NA|207aa|down_8|NC_019764.1_41387_42008_+	NA|469aa|up_9|NC_019764.1_11648_13055_+	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|536aa|up_8|NC_019764.1_13144_14752_+	cd00140, beta_clamp, Beta clamp domain	NA|113aa|up_7|NC_019764.1_15131_15470_-	NA	NA|218aa|up_6|NC_019764.1_15888_16542_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|392aa|up_5|NC_019764.1_16717_17893_-	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains	NA|648aa|up_4|NC_019764.1_17896_19840_-	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion]	NA|347aa|up_3|NC_019764.1_20529_21570_+	NA	NA|209aa|up_2|NC_019764.1_21760_22387_-	NA	NA|708aa|up_1|NC_019764.1_22789_24913_-	NA	NA|74aa|up_0|NC_019764.1_25340_25562_-	NA	NA|61aa|down_0|NC_019764.1_28311_28494_-	NA	NA|319aa|down_1|NC_019764.1_28684_29641_-	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|1077aa|down_2|NC_019764.1_29653_32884_-	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|664aa|down_3|NC_019764.1_32969_34961_+	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|341aa|down_4|NC_019764.1_34979_36002_-	TIGR02242, putative_secreted_protein, phage tail protein domain	NA|748aa|down_5|NC_019764.1_36242_38486_-	TIGR02243, hypothetical_protein_SCD8A	NA|142aa|down_6|NC_019764.1_38482_38908_-	pfam04965, GPW_gp25, Gene 25-like lysozyme	NA|620aa|down_7|NC_019764.1_39039_40899_-	cd17033, DR1245-like, possible type III secretion system (T3SS) chaperone protein DR1245 found in Deinococcus radiodurans	NA|207aa|down_8|NC_019764.1_41387_42008_+	NA	NA|265aa|down_9|NC_019764.1_42338_43133_-	cd13777, Aar2_N, N-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor
GCF_000317475.1_ASM31747v1	NC_019764	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence	2	50769-50923	2	CRISPRCasFinder	no			Orphan	TTCGAGTTGAACGGACGAAGCATTTTGGTCCGAGCGAGCTGGGGCAGAGT	50	0	0	NA	NA	NA	1	1	Orphan	cas6,Cas14c_CAS-V-F,cas14k,RT,cas14j,PD-DExK,DEDDh,c2c9_V-U4,WYL,cas10,cmr4gr7,cmr5gr11,csx1,Cas9_archaeal,Cas14u_CAS-V,csm3gr7,csx19,csx10gr5,csa3,2OG_CAS,csx21,csm6,csm2gr11,DinG,cas3,cas10d,csc2gr7,csc1gr5,cas4,cas1,cas2,csx3	NA|207aa|up_5|NC_019764.1_41387_42008_+,NA|160aa|up_3|NC_019764.1_43206_43686_-,NA|454aa|down_1|NC_019764.1_53508_54870_-,NA|760aa|down_2|NC_019764.1_54879_57159_-,NA|139aa|down_5|NC_019764.1_59402_59819_-,NA|144aa|down_6|NC_019764.1_60022_60454_-,NA|54aa|down_7|NC_019764.1_60504_60666_-	NA|341aa|up_9|NC_019764.1_34979_36002_-	TIGR02242, putative_secreted_protein, phage tail protein domain	NA|748aa|up_8|NC_019764.1_36242_38486_-	TIGR02243, hypothetical_protein_SCD8A	NA|142aa|up_7|NC_019764.1_38482_38908_-	pfam04965, GPW_gp25, Gene 25-like lysozyme	NA|620aa|up_6|NC_019764.1_39039_40899_-	cd17033, DR1245-like, possible type III secretion system (T3SS) chaperone protein DR1245 found in Deinococcus radiodurans	NA|207aa|up_5|NC_019764.1_41387_42008_+	NA	NA|265aa|up_4|NC_019764.1_42338_43133_-	cd13777, Aar2_N, N-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor	NA|160aa|up_3|NC_019764.1_43206_43686_-	NA	NA|276aa|up_2|NC_019764.1_43709_44537_-	cd13777, Aar2_N, N-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor	NA|1170aa|up_1|NC_019764.1_44700_48210_-	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|319aa|up_0|NC_019764.1_49332_50288_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|705aa|down_0|NC_019764.1_51262_53377_+	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|454aa|down_1|NC_019764.1_53508_54870_-	NA	NA|760aa|down_2|NC_019764.1_54879_57159_-	NA	NA|400aa|down_3|NC_019764.1_57176_58376_-	pfam07592, DDE_Tnp_ISAZ013, Rhodopirellula transposase DDE domain	NA|278aa|down_4|NC_019764.1_58441_59275_-	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|139aa|down_5|NC_019764.1_59402_59819_-	NA	NA|144aa|down_6|NC_019764.1_60022_60454_-	NA	NA|54aa|down_7|NC_019764.1_60504_60666_-	NA	NA|400aa|down_8|NC_019764.1_61114_62314_-	pfam07592, DDE_Tnp_ISAZ013, Rhodopirellula transposase DDE domain	NA|799aa|down_9|NC_019764.1_62785_65182_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS
