prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	0	15397	DBSCAN-SWA		Klebsiella_phage(100.0%)	12	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	31271	37832	DBSCAN-SWA	transposase	Ralstonia_virus(66.67%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	41016	44532	DBSCAN-SWA		Salmonella_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	49420	50878	DBSCAN-SWA	tRNA	Tupanvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	54154	55741	DBSCAN-SWA		Moraxella_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	67663	68485	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	71904	72453	DBSCAN-SWA		Lactobacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	76358	78953	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	84248	85094	DBSCAN-SWA		Rhodococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	95280	96443	DBSCAN-SWA	transposase	Shigella_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	115105	119785	DBSCAN-SWA		Escherichia_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	125571	126691	DBSCAN-SWA	transposase	Leptospira_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	133902	136602	DBSCAN-SWA		Anomala_cuprea_entomopoxvirus(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	143782	147067	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	151314	157068	DBSCAN-SWA		Streptococcus_phage(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	166783	175342	DBSCAN-SWA	tRNA	Salmonella_phage(20.0%)	9	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	182342	184508	DBSCAN-SWA		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	191154	192411	DBSCAN-SWA		Phage_21(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	197010	203101	DBSCAN-SWA		Tupanvirus(33.33%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	240799	244421	DBSCAN-SWA	transposase	Leptospira_phage(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	248976	250350	DBSCAN-SWA		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	255380	260041	DBSCAN-SWA	transposase	Bacillus_phage(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	266482	275478	DBSCAN-SWA		Bacillus_phage(40.0%)	9	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	279489	291155	DBSCAN-SWA	tRNA,transposase	Planktothrix_phage(40.0%)	12	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	295996	303585	DBSCAN-SWA		Lactobacillus_phage(33.33%)	7	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	311011	315227	DBSCAN-SWA		Lactobacillus_phage(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	318374	321137	DBSCAN-SWA		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	338234	340188	DBSCAN-SWA		uncultured_virus(100.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	346596	348297	DBSCAN-SWA		Orpheovirus(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	355392	356163	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	361640	362465	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	367494	372239	DBSCAN-SWA	transposase	Acinetobacter_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	380942	382466	DBSCAN-SWA		Mollivirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	404884	405835	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	421025	422336	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	425364	426750	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	431718	444443	DBSCAN-SWA	transposase	Chrysochromulina_ericina_virus(20.0%)	11	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	454046	455696	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	460960	463834	DBSCAN-SWA		Prochlorococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	470613	471177	DBSCAN-SWA		Pseudomonas_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	478479	480555	DBSCAN-SWA	tRNA	Klosneuvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	484345	487298	DBSCAN-SWA		Chrysochromulina_ericina_virus(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	490697	491459	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	498359	499037	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	517768	518638	DBSCAN-SWA		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	542374	543262	DBSCAN-SWA		Lactobacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	547291	624351	DBSCAN-SWA	tRNA,integrase,transposase	Ralstonia_virus(21.43%)	56	550146:550205	598733:599303
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	636746	647061	DBSCAN-SWA	tRNA,transposase	Klosneuvirus(50.0%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	654908	656029	DBSCAN-SWA	transposase	Leptospira_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	669608	675085	DBSCAN-SWA		Bacillus_virus(66.67%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	687046	687718	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	695830	707139	DBSCAN-SWA	transposase	uncultured_virus(25.0%)	9	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	711884	713105	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	717658	730173	DBSCAN-SWA	tRNA,transposase	Staphylococcus_phage(25.0%)	11	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	743853	744396	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	794448	795735	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	814871	820554	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	835974	837959	DBSCAN-SWA		Planktothrix_phage(100.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	862275	863073	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	877950	883132	DBSCAN-SWA		Bacillus_virus(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	901406	902696	DBSCAN-SWA		Pandoravirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	906235	923853	DBSCAN-SWA	tRNA	Pandoravirus(25.0%)	11	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	928442	929297	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	936293	948471	DBSCAN-SWA	tRNA,transposase	uncultured_Caudovirales_phage(20.0%)	11	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	969533	970067	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	975225	976368	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	988933	990054	DBSCAN-SWA	transposase	Leptospira_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1008826	1014281	DBSCAN-SWA		Escherichia_phage(25.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1022907	1031072	DBSCAN-SWA	transposase	Ralstonia_virus(33.33%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1044598	1046907	DBSCAN-SWA		Caulobacter_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1061104	1062238	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1066962	1074837	DBSCAN-SWA	transposase	Ralstonia_virus(33.33%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1077884	1078142	DBSCAN-SWA		Rhizobium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1094705	1095926	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1111978	1113541	DBSCAN-SWA	tRNA	Prochlorococcus_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1122801	1123818	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1135311	1140857	DBSCAN-SWA		Bacillus_phage(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1201000	1205423	DBSCAN-SWA		Stx2-converting_phage(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1210807	1214257	DBSCAN-SWA		Enterobacteria_phage(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1220860	1226818	DBSCAN-SWA	tRNA	Catovirus(66.67%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1234956	1236030	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1245424	1246507	DBSCAN-SWA		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1249953	1257814	DBSCAN-SWA	transposase	Moumouvirus(33.33%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1268340	1279897	DBSCAN-SWA	transposase	Staphylococcus_phage(40.0%)	10	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1285938	1287920	DBSCAN-SWA		Planktothrix_phage(100.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1305932	1306124	DBSCAN-SWA		Lactococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1310059	1326060	DBSCAN-SWA		Natrialba_phage(16.67%)	12	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1334603	1337973	DBSCAN-SWA		Streptococcus_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1351927	1352755	DBSCAN-SWA		Pandoravirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1381543	1390672	DBSCAN-SWA	transposase	uncultured_Mediterranean_phage(25.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1404346	1409345	DBSCAN-SWA		Klosneuvirus(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1446443	1453134	DBSCAN-SWA		Tupanvirus(33.33%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1462422	1464403	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1474624	1479195	DBSCAN-SWA		Brazilian_cedratvirus(50.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1487825	1495662	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1503503	1505120	DBSCAN-SWA		Flavobacterium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1512319	1520052	DBSCAN-SWA		Chrysochromulina_ericina_virus(33.33%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1529260	1530433	DBSCAN-SWA		Oenococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1536419	1537640	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1548789	1550397	DBSCAN-SWA		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1570785	1578659	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1584267	1585053	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1604433	1606362	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1609801	1613800	DBSCAN-SWA		Acinetobacter_phage(75.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1619268	1621211	DBSCAN-SWA	tRNA	Streptococcus_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1625420	1626914	DBSCAN-SWA		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1639844	1645869	DBSCAN-SWA		Planktothrix_phage(66.67%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1675596	1676379	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1693608	1698005	DBSCAN-SWA		Caulobacter_phage(25.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1705910	1708579	DBSCAN-SWA		Staphylococcus_phage(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1716817	1720826	DBSCAN-SWA		Bacillus_phage(66.67%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1734832	1738224	DBSCAN-SWA		Catovirus(33.33%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1741386	1744531	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1750169	1758420	DBSCAN-SWA		uncultured_Mediterranean_phage(50.0%)	7	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1762713	1766484	DBSCAN-SWA		Dickeya_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1774991	1780126	DBSCAN-SWA		Planktothrix_phage(66.67%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1801815	1802775	DBSCAN-SWA		Barns_Ness_breadcrumb_sponge_sobemo-like_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1810912	1812396	DBSCAN-SWA		Brazilian_cedratvirus(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1816678	1817473	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1822842	1828495	DBSCAN-SWA	transposase	Staphylococcus_phage(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1839963	1841844	DBSCAN-SWA		Lactococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1852518	1860767	DBSCAN-SWA		Pseudomonas_phage(75.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1872214	1873665	DBSCAN-SWA		Staphylococcus_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1878383	1879940	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1893671	1905499	DBSCAN-SWA	tRNA	Staphylococcus_phage(40.0%)	11	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1916467	1917688	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1934302	1940447	DBSCAN-SWA	transposase	Bacillus_phage(33.33%)	7	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1943456	1949668	DBSCAN-SWA	transposase	Bradyrhizobium_phage(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1953072	1957855	DBSCAN-SWA		Cronobacter_phage(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1963182	1965297	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1973021	1974752	DBSCAN-SWA	tRNA	Tupanvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	1979836	1984567	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2003637	2005446	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2025354	2026338	DBSCAN-SWA		Xanthomonas_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2030164	2040361	DBSCAN-SWA	transposase	Ralstonia_virus(25.0%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2082051	2086082	DBSCAN-SWA	tRNA,transposase	Bacillus_phage(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2092341	2095201	DBSCAN-SWA		Ralstonia_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2099113	2099791	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2103412	2105985	DBSCAN-SWA		Brazilian_cedratvirus(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2117861	2119037	DBSCAN-SWA		Agrobacterium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2123273	2124587	DBSCAN-SWA		Burkholderia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2138116	2138899	DBSCAN-SWA		Rhizobium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2144409	2148047	DBSCAN-SWA		Trichoplusia_ni_ascovirus(33.33%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2154403	2165125	DBSCAN-SWA	transposase	Streptococcus_phage(20.0%)	11	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2171371	2181220	DBSCAN-SWA	transposase	Ralstonia_virus(40.0%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2189969	2191850	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2197373	2208188	DBSCAN-SWA		Acinetobacter_phage(20.0%)	9	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2224929	2228074	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2233416	2237653	DBSCAN-SWA	transposase	Synechococcus_phage(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2249726	2251154	DBSCAN-SWA		Erysipelothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2262762	2264811	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2275496	2278099	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2283721	2285998	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2298421	2302378	DBSCAN-SWA	transposase	Leptospira_phage(33.33%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2308828	2314826	DBSCAN-SWA		Bacillus_virus(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2321748	2327254	DBSCAN-SWA		Synechococcus_phage(25.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2336561	2340594	DBSCAN-SWA		Bacillus_virus(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2344256	2345477	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2349515	2350061	DBSCAN-SWA		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2354712	2355801	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2358804	2360025	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2372960	2374088	DBSCAN-SWA		Mycoplasma_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2384473	2392909	DBSCAN-SWA		Catovirus(33.33%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2400770	2509407	DBSCAN-SWA	tRNA,transposase,protease	Ralstonia_virus(16.13%)	97	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2514194	2570959	DBSCAN-SWA	tRNA,transposase,protease	Ralstonia_virus(21.43%)	45	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2578561	2583240	DBSCAN-SWA		Lake_Baikal_phage(25.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2588156	2595350	DBSCAN-SWA	transposase	Staphylococcus_phage(40.0%)	8	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2601618	2604035	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2608683	2611576	DBSCAN-SWA	transposase	Ralstonia_virus(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2633662	2635756	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2642241	2643927	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2662004	2662679	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2666448	2666973	DBSCAN-SWA		Rhizobium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2685417	2685921	DBSCAN-SWA		Cyanophage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2691141	2693745	DBSCAN-SWA		Agrobacterium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2699393	2699774	DBSCAN-SWA		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2720182	2721181	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2725412	2728538	DBSCAN-SWA		Bodo_saltans_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2736907	2740235	DBSCAN-SWA		Staphylococcus_phage(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2743403	2746422	DBSCAN-SWA		Indivirus(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2762071	2770788	DBSCAN-SWA		Vibrio_phage(33.33%)	7	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2780501	2780813	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2785666	2786689	DBSCAN-SWA		Pseudomonas_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2791568	2796125	DBSCAN-SWA	tRNA	uncultured_Mediterranean_phage(100.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2803359	2804580	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2827992	2828934	DBSCAN-SWA		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2833088	2833886	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2843667	2847553	DBSCAN-SWA		Mollivirus(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2857375	2861156	DBSCAN-SWA		Ostreococcus_lucimarinus_virus(33.33%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2871307	2873377	DBSCAN-SWA		Streptococcus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2876838	2880846	DBSCAN-SWA		Anomala_cuprea_entomopoxvirus(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2884160	2885057	DBSCAN-SWA		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	2892126	3000966	DBSCAN-SWA	tRNA,integrase,transposase	Leptospira_phage(12.9%)	103	2951411:2951427	2997077:2997093
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3010939	3011389	DBSCAN-SWA		Xanthomonas_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3016901	3065370	DBSCAN-SWA	tRNA,integrase,holin,transposase	Leptospira_phage(28.57%)	42	3061186:3061200	3067662:3067676
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3075657	3077433	DBSCAN-SWA		Erysipelothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3084756	3129285	DBSCAN-SWA	transposase	Ralstonia_virus(40.0%)	41	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3139239	3140463	DBSCAN-SWA		Salmonella_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3145880	3146861	DBSCAN-SWA		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3152330	3153059	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3160072	3161698	DBSCAN-SWA		Rhizobium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3165225	3167955	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3174293	3177721	DBSCAN-SWA		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3181040	3181535	DBSCAN-SWA		Canarypox_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3193352	3193976	DBSCAN-SWA		Bacteriophage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3197903	3199124	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3204392	3208103	DBSCAN-SWA	transposase	Staphylococcus_phage(50.0%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3211534	3216742	DBSCAN-SWA		Hokovirus(50.0%)	5	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3227011	3227770	DBSCAN-SWA		Flavobacterium_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3236685	3238206	DBSCAN-SWA		Mollivirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3261824	3263571	DBSCAN-SWA		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3275830	3276025	DBSCAN-SWA		Pseudomonas_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3283324	3284077	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3289021	3290511	DBSCAN-SWA		Staphylococcus_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3297053	3298598	DBSCAN-SWA		Moraxella_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3301607	3305264	DBSCAN-SWA		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3309534	3310654	DBSCAN-SWA	transposase	Leptospira_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3317877	3319575	DBSCAN-SWA		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3326428	3327549	DBSCAN-SWA	transposase	Leptospira_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3331009	3334865	DBSCAN-SWA	transposase	Ralstonia_virus(33.33%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3338594	3339143	DBSCAN-SWA		Vibrio_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3343562	3345975	DBSCAN-SWA	transposase	Planktothrix_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3356999	3357695	DBSCAN-SWA		Catovirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3362183	3363795	DBSCAN-SWA		Pithovirus(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3367808	3369029	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3372979	3373756	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3378191	3379256	DBSCAN-SWA		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3384695	3387731	DBSCAN-SWA	transposase	uncultured_Caudovirales_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3396906	3402461	DBSCAN-SWA		Clostridium_phage(25.0%)	6	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3413198	3441572	DBSCAN-SWA	transposase	uncultured_Mediterranean_phage(20.0%)	20	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3446375	3450481	DBSCAN-SWA	tRNA	Moraxella_phage(66.67%)	4	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3453726	3517620	DBSCAN-SWA	tRNA,transposase,protease	Ralstonia_virus(20.0%)	61	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3535349	3535961	DBSCAN-SWA		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3540345	3542837	DBSCAN-SWA		Planktothrix_phage(50.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3549645	3550185	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3564242	3565703	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3573662	3575668	DBSCAN-SWA		Planktothrix_phage(100.0%)	2	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3583255	3587305	DBSCAN-SWA		Burkholderia_phage(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3595187	3596408	DBSCAN-SWA	transposase	Ralstonia_virus(100.0%)	1	NA	NA
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3609970	3684997	DBSCAN-SWA	tRNA,integrase,transposase,protease	Leptospira_phage(14.81%)	72	3644279:3644338	3665586:3665860
GCF_000341485.2_ASM34148v2	NZ_CP007158	Bordetella holmesii H558 chromosome, complete genome	3696428	3691401	3696095	DBSCAN-SWA	transposase	Shigella_phage(50.0%)	3	NA	NA
