assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	1	205661-207075	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	GTTTGAAGTTTACCTATAAGGAATTGAAA,GTTTGAAGTTTACCTATAAGGAATTGAAAC,GTTTGAAGTTTACCTATAAGGAATTGAAA	29,30,29	0	0	NA	NA	NA:NA:NA	20,21,21	21	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA,NA|72aa|down_7|NC_020887.2_217068_217284_-	NA|261aa|up_9|NC_020887.2_192841_193624_+	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family	NA|294aa|up_8|NC_020887.2_193648_194530_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|605aa|up_7|NC_020887.2_194588_196403_+	COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]	NA|136aa|up_6|NC_020887.2_196434_196842_+	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|62aa|up_5|NC_020887.2_196844_197030_-	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases	NA|252aa|up_4|NC_020887.2_197437_198193_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|1082aa|up_3|NC_020887.2_198434_201680_+	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|357aa|up_2|NC_020887.2_201779_202850_+	PRK00591, prfA, peptide chain release factor 1; Validated	NA|284aa|up_1|NC_020887.2_203014_203866_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|136aa|up_0|NC_020887.2_203995_204403_-	TIGR02481, hemeryth_dom, hemerythrin-like metal-binding domain	NA|367aa|down_0|NC_020887.2_207394_208495_+	pfam04389, Peptidase_M28, Peptidase family M28	NA|357aa|down_1|NC_020887.2_209527_210598_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|389aa|down_2|NC_020887.2_211779_212946_-	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|458aa|down_3|NC_020887.2_212930_214304_-	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only]	NA|401aa|down_4|NC_020887.2_214300_215503_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|352aa|down_5|NC_020887.2_215504_216560_-	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only]	NA|108aa|down_6|NC_020887.2_216691_217015_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|72aa|down_7|NC_020887.2_217068_217284_-	NA	NA|501aa|down_8|NC_020887.2_219538_221041_+	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold	NA|312aa|down_9|NC_020887.2_221134_222070_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	2	784887-786088	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	GTTTAAAGTTTACCTATAAGGAATTGAAAC,GTTTAAAGTTTACCTATAAGGAATTGAAAC,GTTTAAAGTTTACCTATAAGGAATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	17,18,18	18	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|102aa|up_5|NC_020887.2_778347_778653_-,NA|194aa|up_4|NC_020887.2_778921_779503_-,NA|111aa|down_0|NC_020887.2_786881_787214_+,NA|77aa|down_1|NC_020887.2_787732_787963_+,NA|182aa|down_5|NC_020887.2_792007_792553_+	NA|176aa|up_9|NC_020887.2_773416_773944_+	cd00483, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)	NA|187aa|up_8|NC_020887.2_773972_774533_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|582aa|up_7|NC_020887.2_774686_776432_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|583aa|up_6|NC_020887.2_776433_778182_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|102aa|up_5|NC_020887.2_778347_778653_-	NA	NA|194aa|up_4|NC_020887.2_778921_779503_-	NA	NA|199aa|up_3|NC_020887.2_779915_780512_+	pfam02417, Chromate_transp, Chromate transporter	NA|198aa|up_2|NC_020887.2_780498_781092_+	pfam02417, Chromate_transp, Chromate transporter	NA|393aa|up_1|NC_020887.2_781276_782455_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|156aa|up_0|NC_020887.2_783113_783581_+	pfam01668, SmpB, SmpB protein	NA|111aa|down_0|NC_020887.2_786881_787214_+	NA	NA|77aa|down_1|NC_020887.2_787732_787963_+	NA	NA|221aa|down_2|NC_020887.2_787969_788632_+	COG5632, COG5632, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|174aa|down_3|NC_020887.2_790092_790614_+	pfam01625, PMSR, Peptide methionine sulfoxide reductase	NA|416aa|down_4|NC_020887.2_790749_791997_+	smart00633, Glyco_10, Glycosyl hydrolase family 10	NA|182aa|down_5|NC_020887.2_792007_792553_+	NA	NA|794aa|down_6|NC_020887.2_792699_795081_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|329aa|down_7|NC_020887.2_795229_796216_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|598aa|down_8|NC_020887.2_796243_798037_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|401aa|down_9|NC_020887.2_798046_799249_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	3	786232-786391	3	CRISPRCasFinder	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	GTTTAAAGTTTACCTATAAGGAATTGAAAC	30	0	0	NA	NA	NA	2	2	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|102aa|up_5|NC_020887.2_778347_778653_-,NA|194aa|up_4|NC_020887.2_778921_779503_-,NA|111aa|down_0|NC_020887.2_786881_787214_+,NA|77aa|down_1|NC_020887.2_787732_787963_+,NA|182aa|down_5|NC_020887.2_792007_792553_+	NA|176aa|up_9|NC_020887.2_773416_773944_+	cd00483, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)	NA|187aa|up_8|NC_020887.2_773972_774533_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|582aa|up_7|NC_020887.2_774686_776432_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|583aa|up_6|NC_020887.2_776433_778182_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|102aa|up_5|NC_020887.2_778347_778653_-	NA	NA|194aa|up_4|NC_020887.2_778921_779503_-	NA	NA|199aa|up_3|NC_020887.2_779915_780512_+	pfam02417, Chromate_transp, Chromate transporter	NA|198aa|up_2|NC_020887.2_780498_781092_+	pfam02417, Chromate_transp, Chromate transporter	NA|393aa|up_1|NC_020887.2_781276_782455_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|156aa|up_0|NC_020887.2_783113_783581_+	pfam01668, SmpB, SmpB protein	NA|111aa|down_0|NC_020887.2_786881_787214_+	NA	NA|77aa|down_1|NC_020887.2_787732_787963_+	NA	NA|221aa|down_2|NC_020887.2_787969_788632_+	COG5632, COG5632, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|174aa|down_3|NC_020887.2_790092_790614_+	pfam01625, PMSR, Peptide methionine sulfoxide reductase	NA|416aa|down_4|NC_020887.2_790749_791997_+	smart00633, Glyco_10, Glycosyl hydrolase family 10	NA|182aa|down_5|NC_020887.2_792007_792553_+	NA	NA|794aa|down_6|NC_020887.2_792699_795081_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|329aa|down_7|NC_020887.2_795229_796216_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|598aa|down_8|NC_020887.2_796243_798037_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|401aa|down_9|NC_020887.2_798046_799249_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	4	789253-789736	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	GTTTGAAGTTTACCTATGAGGAATTGAAAC,GTTTGAAGTTTACCTATGAGGAATTGAAAC,GTTTGAAGTTTACCTATGAGGAATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	6,7,7	7	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|102aa|up_8|NC_020887.2_778347_778653_-,NA|194aa|up_7|NC_020887.2_778921_779503_-,NA|111aa|up_2|NC_020887.2_786881_787214_+,NA|77aa|up_1|NC_020887.2_787732_787963_+,NA|182aa|down_2|NC_020887.2_792007_792553_+,NA|83aa|down_8|NC_020887.2_800315_800564_+	NA|583aa|up_9|NC_020887.2_776433_778182_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|102aa|up_8|NC_020887.2_778347_778653_-	NA	NA|194aa|up_7|NC_020887.2_778921_779503_-	NA	NA|199aa|up_6|NC_020887.2_779915_780512_+	pfam02417, Chromate_transp, Chromate transporter	NA|198aa|up_5|NC_020887.2_780498_781092_+	pfam02417, Chromate_transp, Chromate transporter	NA|393aa|up_4|NC_020887.2_781276_782455_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|156aa|up_3|NC_020887.2_783113_783581_+	pfam01668, SmpB, SmpB protein	NA|111aa|up_2|NC_020887.2_786881_787214_+	NA	NA|77aa|up_1|NC_020887.2_787732_787963_+	NA	NA|221aa|up_0|NC_020887.2_787969_788632_+	COG5632, COG5632, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|174aa|down_0|NC_020887.2_790092_790614_+	pfam01625, PMSR, Peptide methionine sulfoxide reductase	NA|416aa|down_1|NC_020887.2_790749_791997_+	smart00633, Glyco_10, Glycosyl hydrolase family 10	NA|182aa|down_2|NC_020887.2_792007_792553_+	NA	NA|794aa|down_3|NC_020887.2_792699_795081_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|329aa|down_4|NC_020887.2_795229_796216_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|598aa|down_5|NC_020887.2_796243_798037_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|401aa|down_6|NC_020887.2_798046_799249_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|345aa|down_7|NC_020887.2_799245_800280_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|83aa|down_8|NC_020887.2_800315_800564_+	NA	NA|82aa|down_9|NC_020887.2_800626_800872_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	5	1502849-1503142	5,4,4	CRISPRCasFinder,CRT,PILER-CR	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	ATTTACATTCCATTATGGTTAGATTAAAAG,ATTTACATTCCATTATGGTTAGATTAAAAG,ATTTACATTCCATTATGGTTAGATTAAAAG	30,30,30	0	0	NA	NA	I-A:I-A:I-A	4,4,3	4	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA,NA|122aa|down_1|NC_020887.2_1505474_1505840_-	NA|331aa|up_9|NC_020887.2_1490073_1491066_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|163aa|up_8|NC_020887.2_1491100_1491589_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|553aa|up_7|NC_020887.2_1491661_1493320_-	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|557aa|up_6|NC_020887.2_1493417_1495088_-	PRK06048, PRK06048, acetolactate synthase large subunit	NA|364aa|up_5|NC_020887.2_1495116_1496208_-	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|163aa|up_4|NC_020887.2_1496254_1496743_-	PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed	NA|422aa|up_3|NC_020887.2_1496792_1498058_-	PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed	NA|405aa|up_2|NC_020887.2_1498343_1499558_+	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|711aa|up_1|NC_020887.2_1499604_1501737_-	PRK05582, PRK05582, type I DNA topoisomerase	NA|254aa|up_0|NC_020887.2_1501871_1502633_-	cd10950, CE4_BsYlxY_like, Putative catalytic NodB homology domain of uncharacterized protein YlxY from Bacillus subtilis and its bacterial homologs	NA|594aa|down_0|NC_020887.2_1503543_1505325_-	PRK10150, PRK10150, beta-D-glucuronidase; Provisional	NA|122aa|down_1|NC_020887.2_1505474_1505840_-	NA	NA|487aa|down_2|NC_020887.2_1505902_1507363_-	PRK08207, PRK08207, coproporphyrinogen III oxidase; Provisional	NA|211aa|down_3|NC_020887.2_1507385_1508018_-	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|154aa|down_4|NC_020887.2_1508031_1508493_-	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|728aa|down_5|NC_020887.2_1508504_1510688_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|725aa|down_6|NC_020887.2_1510698_1512873_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|59aa|down_7|NC_020887.2_1513109_1513286_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|115aa|down_8|NC_020887.2_1513426_1513771_-	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|880aa|down_9|NC_020887.2_1513824_1516464_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	6	1784474-1788665	5,5,6,6	CRT,PILER-CR,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Unclear	NNNNNNATTTACATTCCAATATGGTTAGATTCAAAG,ATTTACATTCCAATATGGTTAGATTCAAAG,ATTTACATTCCAATATGGTTAGATTCAAAG,ATTTACATTCCAATATGGTTAGATTCAAAG	36,30,30,30	0	0	NA	NA	NA:NA:NA:NA	63,60,62,60	63	Unclear	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|53aa|up_5|NC_020887.2_1777245_1777404_+,NA	NA|451aa|up_9|NC_020887.2_1771504_1772857_-	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner	NA|524aa|up_8|NC_020887.2_1772877_1774449_-	cd11475, SLC5sbd_PutP, Na(+)/proline cotransporter PutP and related proteins; solute binding domain	NA|266aa|up_7|NC_020887.2_1774564_1775362_-	COG2302, COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown]	NA|457aa|up_6|NC_020887.2_1775500_1776871_-	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner	NA|53aa|up_5|NC_020887.2_1777245_1777404_+	NA	NA|294aa|up_4|NC_020887.2_1777507_1778389_+	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|737aa|up_3|NC_020887.2_1778449_1780660_-	COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]	NA|277aa|up_2|NC_020887.2_1780697_1781528_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|301aa|up_1|NC_020887.2_1781538_1782441_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|441aa|up_0|NC_020887.2_1782536_1783859_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	cas2|93aa|down_0|NC_020887.2_1788952_1789231_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_1|NC_020887.2_1789236_1790229_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|157aa|down_2|NC_020887.2_1790265_1790736_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|782aa|down_3|NC_020887.2_1790773_1793119_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|251aa|down_4|NC_020887.2_1793152_1793905_-	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|292aa|down_5|NC_020887.2_1793901_1794777_-	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas8b2|565aa|down_6|NC_020887.2_1794779_1796474_-	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas6|239aa|down_7|NC_020887.2_1796492_1797209_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|544aa|down_8|NC_020887.2_1797414_1799046_-	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|399aa|down_9|NC_020887.2_1799090_1800287_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	7	1946511-1946713	7	PILER-CR	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	TGCTTTGCCTGTTCTTTCACCGCAACGGTAACCTG	35	0	0	NA	NA	NA	2	2	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA,NA|76aa|down_4|NC_020887.2_1953941_1954169_-	NA|190aa|up_9|NC_020887.2_1932099_1932669_-	pfam03861, ANTAR, ANTAR domain	NA|440aa|up_8|NC_020887.2_1932703_1934023_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|239aa|up_7|NC_020887.2_1934116_1934833_-	cd00981, arch_gltB, Archaeal-type gltB domain	NA|502aa|up_6|NC_020887.2_1934902_1936408_-	COG0069, GltB, Glutamate synthase domain 2 [Amino acid transport and metabolism]	NA|379aa|up_5|NC_020887.2_1936398_1937535_-	cd01907, GlxB, Glutamine amidotransferases class-II (Gn-AT)_GlxB-type	NA|336aa|up_4|NC_020887.2_1938140_1939148_+	PRK05425, PRK05425, asparagine synthetase AsnA; Provisional	NA|701aa|up_3|NC_020887.2_1939163_1941266_+	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only]	NA|422aa|up_2|NC_020887.2_1941455_1942721_+	pfam00709, Adenylsucc_synt, Adenylosuccinate synthetase	NA|362aa|up_1|NC_020887.2_1942915_1944001_-	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|272aa|up_0|NC_020887.2_1943991_1944807_-	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|697aa|down_0|NC_020887.2_1949580_1951671_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|143aa|down_1|NC_020887.2_1951684_1952113_-	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea	NA|118aa|down_2|NC_020887.2_1952138_1952492_-	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY	NA|187aa|down_3|NC_020887.2_1952902_1953463_+	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|76aa|down_4|NC_020887.2_1953941_1954169_-	NA	NA|392aa|down_5|NC_020887.2_1954465_1955641_-	cd06829, PLPDE_III_CANSDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase	NA|400aa|down_6|NC_020887.2_1955651_1956851_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|284aa|down_7|NC_020887.2_1956944_1957796_-	cd11593, Agmatinase-like_2, Agmatinase and related proteins	NA|282aa|down_8|NC_020887.2_1957788_1958634_-	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|481aa|down_9|NC_020887.2_1958636_1960079_-	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	8	2070280-2070607	7,6	CRISPRCasFinder,CRT	no	cas6,cas8b2,cas7,cas5,cas3	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Unclear	GTTAATAATTAACCATTATGGAATGTAAAT,GTTAATAATTAACCATTATGGAATGTAAAT	30,30	1	1	2070310-2070345	NC_020887.2_913493-913458	NA:NA	4,3	4	Unclear	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA,NA|479aa|down_6|NC_020887.2_2084988_2086425_-	NA|906aa|up_9|NC_020887.2_2056528_2059246_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|313aa|up_8|NC_020887.2_2059482_2060421_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|677aa|up_7|NC_020887.2_2060757_2062788_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|482aa|up_6|NC_020887.2_2063245_2064691_+	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein	NA|88aa|up_5|NC_020887.2_2064954_2065218_-	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion]	NA|144aa|up_4|NC_020887.2_2065580_2066012_-	pfam01613, Flavin_Reduct, Flavin reductase like domain	cas6|129aa|up_3|NC_020887.2_2066296_2066683_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b2|570aa|up_2|NC_020887.2_2066698_2068408_+	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|308aa|up_1|NC_020887.2_2068400_2069324_+	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas5|237aa|up_0|NC_020887.2_2069388_2070099_+	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|738aa|down_0|NC_020887.2_2070634_2072848_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|987aa|down_1|NC_020887.2_2073176_2076137_-	pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9	NA|915aa|down_2|NC_020887.2_2076279_2079024_-	pfam02011, Glyco_hydro_48, Glycosyl hydrolase family 48	NA|407aa|down_3|NC_020887.2_2079830_2081051_-	pfam09983, DUF2220, Uncharacterized protein conserved in bacteria C-term(DUF2220)	NA|1096aa|down_4|NC_020887.2_2081064_2084352_-	pfam13558, SbcCD_C, Putative exonuclease SbcCD, C subunit	NA|216aa|down_5|NC_020887.2_2084348_2084996_-	pfam13835, DUF4194, Domain of unknown function (DUF4194)	NA|479aa|down_6|NC_020887.2_2084988_2086425_-	NA	NA|455aa|down_7|NC_020887.2_2086802_2088167_-	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|277aa|down_8|NC_020887.2_2088805_2089636_-	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|222aa|down_9|NC_020887.2_2089707_2090373_-	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	9	2315243-2315534	7,8	CRT,CRISPRCasFinder	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	TTNCAATTCCTTNTAGGTAA,GTTTCAATTCCTTATAGGTAAACTTTAAAC	20,30	0	0	NA	NA	NA:NA	4,2	4	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|89aa|up_4|NC_020887.2_2312886_2313153_-,NA|60aa|down_1|NC_020887.2_2320104_2320284_-,NA|83aa|down_4|NC_020887.2_2323190_2323439_+	NA|364aa|up_9|NC_020887.2_2300664_2301756_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|165aa|up_8|NC_020887.2_2301819_2302314_-	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|155aa|up_7|NC_020887.2_2302389_2302854_-	cd17906, CheX, chemotaxis phosphatase CheX	NA|368aa|up_6|NC_020887.2_2308909_2310013_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|886aa|up_5|NC_020887.2_2310175_2312833_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|89aa|up_4|NC_020887.2_2312886_2313153_-	NA	NA|96aa|up_3|NC_020887.2_2313660_2313948_+	pfam11007, CotJA, Spore coat associated protein JA (CotJA)	NA|84aa|up_2|NC_020887.2_2313963_2314215_+	pfam12652, CotJB, CotJB protein	NA|83aa|up_1|NC_020887.2_2314217_2314466_+	cd01051, Mn_catalase, Manganese catalase, ferritin-like diiron-binding domain	NA|83aa|up_0|NC_020887.2_2314487_2314736_-	pfam04892, VanZ, VanZ like family	NA|384aa|down_0|NC_020887.2_2316163_2317316_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|60aa|down_1|NC_020887.2_2320104_2320284_-	NA	NA|536aa|down_2|NC_020887.2_2320963_2322571_+	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|136aa|down_3|NC_020887.2_2322522_2322930_+	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|83aa|down_4|NC_020887.2_2323190_2323439_+	NA	NA|439aa|down_5|NC_020887.2_2323797_2325114_-	PRK00077, eno, enolase; Provisional	NA|85aa|down_6|NC_020887.2_2325447_2325702_-	PRK05473, IreB-like, IreB family regulatory phosphoprotein	NA|433aa|down_7|NC_020887.2_2325838_2327137_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|77aa|down_8|NC_020887.2_2327377_2327608_+	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|509aa|down_9|NC_020887.2_2327800_2329327_+	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	10	2315859-2316086	8,9,8	PILER-CR,CRISPRCasFinder,CRT	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	GTTTAAAGTTTACCTATAAGGAATTGAAAC,GTTTCAATTCCTTATAGGTAAACTTTAAAC,GTTTCAATTCCTTATAGGTAAACTTTAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	3,3,3	3	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|89aa|up_4|NC_020887.2_2312886_2313153_-,NA|60aa|down_1|NC_020887.2_2320104_2320284_-,NA|83aa|down_4|NC_020887.2_2323190_2323439_+	NA|364aa|up_9|NC_020887.2_2300664_2301756_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|165aa|up_8|NC_020887.2_2301819_2302314_-	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|155aa|up_7|NC_020887.2_2302389_2302854_-	cd17906, CheX, chemotaxis phosphatase CheX	NA|368aa|up_6|NC_020887.2_2308909_2310013_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|886aa|up_5|NC_020887.2_2310175_2312833_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|89aa|up_4|NC_020887.2_2312886_2313153_-	NA	NA|96aa|up_3|NC_020887.2_2313660_2313948_+	pfam11007, CotJA, Spore coat associated protein JA (CotJA)	NA|84aa|up_2|NC_020887.2_2313963_2314215_+	pfam12652, CotJB, CotJB protein	NA|83aa|up_1|NC_020887.2_2314217_2314466_+	cd01051, Mn_catalase, Manganese catalase, ferritin-like diiron-binding domain	NA|83aa|up_0|NC_020887.2_2314487_2314736_-	pfam04892, VanZ, VanZ like family	NA|384aa|down_0|NC_020887.2_2316163_2317316_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|60aa|down_1|NC_020887.2_2320104_2320284_-	NA	NA|536aa|down_2|NC_020887.2_2320963_2322571_+	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|136aa|down_3|NC_020887.2_2322522_2322930_+	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|83aa|down_4|NC_020887.2_2323190_2323439_+	NA	NA|439aa|down_5|NC_020887.2_2323797_2325114_-	PRK00077, eno, enolase; Provisional	NA|85aa|down_6|NC_020887.2_2325447_2325702_-	PRK05473, IreB-like, IreB family regulatory phosphoprotein	NA|433aa|down_7|NC_020887.2_2325838_2327137_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|77aa|down_8|NC_020887.2_2327377_2327608_+	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|509aa|down_9|NC_020887.2_2327800_2329327_+	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein
GCF_000349885.2_ASM34988v2	NC_020887	Thermoclostridium stercorarium subsp. stercorarium DSM 8532, complete sequence	11	2317569-2318520	9,10,9	PILER-CR,CRISPRCasFinder,CRT	no		cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	Orphan	GTTTGAAGTTTACCTATAAGGAATTGAAAC,GTTTCAATTCCTTATAGGTAAACTTCAAAC,GTTTCAATTCCTTATAGGTAAACTTCAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	14,14,14	14	Orphan	cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2	NA|89aa|up_5|NC_020887.2_2312886_2313153_-,NA|60aa|down_0|NC_020887.2_2320104_2320284_-,NA|83aa|down_3|NC_020887.2_2323190_2323439_+	NA|165aa|up_9|NC_020887.2_2301819_2302314_-	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|155aa|up_8|NC_020887.2_2302389_2302854_-	cd17906, CheX, chemotaxis phosphatase CheX	NA|368aa|up_7|NC_020887.2_2308909_2310013_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|886aa|up_6|NC_020887.2_2310175_2312833_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|89aa|up_5|NC_020887.2_2312886_2313153_-	NA	NA|96aa|up_4|NC_020887.2_2313660_2313948_+	pfam11007, CotJA, Spore coat associated protein JA (CotJA)	NA|84aa|up_3|NC_020887.2_2313963_2314215_+	pfam12652, CotJB, CotJB protein	NA|83aa|up_2|NC_020887.2_2314217_2314466_+	cd01051, Mn_catalase, Manganese catalase, ferritin-like diiron-binding domain	NA|83aa|up_1|NC_020887.2_2314487_2314736_-	pfam04892, VanZ, VanZ like family	NA|384aa|up_0|NC_020887.2_2316163_2317316_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|60aa|down_0|NC_020887.2_2320104_2320284_-	NA	NA|536aa|down_1|NC_020887.2_2320963_2322571_+	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|136aa|down_2|NC_020887.2_2322522_2322930_+	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|83aa|down_3|NC_020887.2_2323190_2323439_+	NA	NA|439aa|down_4|NC_020887.2_2323797_2325114_-	PRK00077, eno, enolase; Provisional	NA|85aa|down_5|NC_020887.2_2325447_2325702_-	PRK05473, IreB-like, IreB family regulatory phosphoprotein	NA|433aa|down_6|NC_020887.2_2325838_2327137_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|77aa|down_7|NC_020887.2_2327377_2327608_+	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|509aa|down_8|NC_020887.2_2327800_2329327_+	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein	NA|404aa|down_9|NC_020887.2_2329360_2330572_+	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family
