bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_021200	Mycobacterium avium subsp. paratuberculosis MAP4, complete sequence	3.1|1086102|29|NC_021200|CRISPRCasFinder	NC_021200.1	Mycobacterium avium subsp. paratuberculosis MAP4, complete sequence	100.00	29	0	0	1	29	351207	351179	406313-406403|932614-932694|1086076-1086156|1114878-1114968|1290115-1290192|2271399-2271505|2346648-2346746|3019476-3019556|4641034-4641141	9e-08	47.5	1.0	CGGCTGCGCCGCGCTTGCGATCGCCGCGC	351179-351207	GCGCGGCGATCGCAAGCGCGGCGCAGCCG	0
NC_021200	Mycobacterium avium subsp. paratuberculosis MAP4, complete sequence	9.1|4641058|18|NC_021200|CRISPRCasFinder	NC_021200.1	Mycobacterium avium subsp. paratuberculosis MAP4, complete sequence	100.00	18	0	0	1	18	4019797	4019814	406313-406403|932614-932694|1086076-1086156|1114878-1114968|1290115-1290192|2271399-2271505|2346648-2346746|3019476-3019556|4641034-4641141	0.017	30.1	1.0	CGCCGGCCAAGAAGGCAC	4019797-4019814	CGCCGGCCAAGAAGGCAC	0
NC_021200	Mycobacterium avium subsp. paratuberculosis MAP4, complete sequence	9.1|4641058|18|NC_021200|CRISPRCasFinder	NC_021200.1	Mycobacterium avium subsp. paratuberculosis MAP4, complete sequence	94.44	18	1	0	1	18	2271357	2271340	406313-406403|932614-932694|1086076-1086156|1114878-1114968|1290115-1290192|2271399-2271505|2346648-2346746|3019476-3019556|4641034-4641141	0.15	26.9	1.0	CGCCGGCCAAGAAGGCAC	2271340-2271357	GTGCCTTCTTGGCCAGCG	1
