assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000414035.1_ASM41403v1	NC_021577	Pseudomonas aeruginosa RP73, complete sequence	1	337000-337113	1	CRISPRCasFinder	no		csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	NA,NA|168aa|down_2|NC_021577.1_341685_342189_-,NA|251aa|down_5|NC_021577.1_343942_344695_-,NA|185aa|down_7|NC_021577.1_345463_346018_-	NA|293aa|up_9|NC_021577.1_323848_324727_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NC_021577.1_324889_325555_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NC_021577.1_325615_326677_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NC_021577.1_326932_328309_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NC_021577.1_328587_329340_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NC_021577.1_329380_330739_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NC_021577.1_330804_332175_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NC_021577.1_332290_333394_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NC_021577.1_333812_334910_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NC_021577.1_334964_336119_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NC_021577.1_338156_340544_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NC_021577.1_340654_341707_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NC_021577.1_341685_342189_-	NA	NA|204aa|down_3|NC_021577.1_342293_342905_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NC_021577.1_342903_343923_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NC_021577.1_343942_344695_-	NA	NA|233aa|down_6|NC_021577.1_344743_345442_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NC_021577.1_345463_346018_-	NA	NA|165aa|down_8|NC_021577.1_346283_346778_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|234aa|down_9|NC_021577.1_346780_347482_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_000414035.1_ASM41403v1	NC_021577	Pseudomonas aeruginosa RP73, complete sequence	2	1409002-1410312	2,1	CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	Type I-E	GTGTTCCCCACGGGTGTGGGGATGAACCG,GTGTTCCCCACGGGTGTGGGGATGAACCG	29,29	0	0	NA	NA	I-E,II-B:I-E,II-B	21,21	21	TypeI-E	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	NA,NA|415aa|down_9|NC_021577.1_1422428_1423673_+	NA|168aa|up_9|NC_021577.1_1395866_1396370_-	pfam14595, Thioredoxin_9, Thioredoxin	NA|261aa|up_8|NC_021577.1_1396561_1397344_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|504aa|up_7|NC_021577.1_1397346_1398858_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|384aa|up_6|NC_021577.1_1398847_1399999_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|483aa|up_5|NC_021577.1_1399995_1401444_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|295aa|up_4|NC_021577.1_1401826_1402711_-	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|266aa|up_3|NC_021577.1_1402767_1403565_-	PRK06563, PRK06563, crotonase/enoyl-CoA hydratase family protein	NA|187aa|up_2|NC_021577.1_1403729_1404290_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|591aa|up_1|NC_021577.1_1404369_1406142_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|859aa|up_0|NC_021577.1_1406164_1408741_-	PRK13557, PRK13557, histidine kinase; Provisional	cas3|891aa|down_0|NC_021577.1_1411032_1413705_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|523aa|down_1|NC_021577.1_1413707_1415276_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|177aa|down_2|NC_021577.1_1415272_1415803_+	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas7|381aa|down_3|NC_021577.1_1415812_1416955_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|221aa|down_4|NC_021577.1_1416956_1417619_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|204aa|down_5|NC_021577.1_1417593_1418205_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|306aa|down_6|NC_021577.1_1418204_1419122_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|down_7|NC_021577.1_1419118_1419418_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|105aa|down_8|NC_021577.1_1421072_1421387_-	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	NA|415aa|down_9|NC_021577.1_1422428_1423673_+	NA
GCF_000414035.1_ASM41403v1	NC_021577	Pseudomonas aeruginosa RP73, complete sequence	3	1419483-1420914	1,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	Type I-E	GTGTTCCCCACATGCGTGGGGATGAACCG,GTGTTCCCCACATGCGTGGGGATGAACCG,GTGTTCCCCACATGCGTGGGGATGAACCG	29,29,29	1	1	1419634-1419665	NC_021577.1_4803374-4803405	I-E,II-B:I-E,II-B:I-E,II-B	23,23,23	23	TypeI-E	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	NA,NA|415aa|down_1|NC_021577.1_1422428_1423673_+	NA|591aa|up_9|NC_021577.1_1404369_1406142_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|859aa|up_8|NC_021577.1_1406164_1408741_-	PRK13557, PRK13557, histidine kinase; Provisional	cas3|891aa|up_7|NC_021577.1_1411032_1413705_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|523aa|up_6|NC_021577.1_1413707_1415276_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|177aa|up_5|NC_021577.1_1415272_1415803_+	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas7|381aa|up_4|NC_021577.1_1415812_1416955_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|221aa|up_3|NC_021577.1_1416956_1417619_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|204aa|up_2|NC_021577.1_1417593_1418205_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|306aa|up_1|NC_021577.1_1418204_1419122_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|up_0|NC_021577.1_1419118_1419418_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|105aa|down_0|NC_021577.1_1421072_1421387_-	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	NA|415aa|down_1|NC_021577.1_1422428_1423673_+	NA	NA|594aa|down_2|NC_021577.1_1423759_1425541_+	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|433aa|down_3|NC_021577.1_1425537_1426836_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|482aa|down_4|NC_021577.1_1426839_1428285_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|480aa|down_5|NC_021577.1_1428643_1430083_+	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|109aa|down_6|NC_021577.1_1430398_1430725_+	pfam02974, Inh, Protease inhibitor Inh	NA|542aa|down_7|NC_021577.1_1430737_1432363_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|335aa|down_8|NC_021577.1_1432591_1433596_+	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion]	NA|527aa|down_9|NC_021577.1_1433699_1435280_-	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase
GCF_000414035.1_ASM41403v1	NC_021577	Pseudomonas aeruginosa RP73, complete sequence	4	3701150-3701252	4	CRISPRCasFinder	no	DEDDh	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	Unclear	GGCGTTATCCGCCGATACCCCGCCGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,RT	NA|106aa|up_6|NC_021577.1_3694587_3694905_-,NA|454aa|down_7|NC_021577.1_3707747_3709109_+	NA|112aa|up_9|NC_021577.1_3692450_3692786_+	PRK10089, PRK10089, chaperone CsaA	NA|300aa|up_8|NC_021577.1_3692795_3693695_+	pfam00892, EamA, EamA-like transporter family	NA|214aa|up_7|NC_021577.1_3693799_3694441_-	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|106aa|up_6|NC_021577.1_3694587_3694905_-	NA	NA|310aa|up_5|NC_021577.1_3695104_3696034_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|276aa|up_4|NC_021577.1_3696040_3696868_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|188aa|up_3|NC_021577.1_3696849_3697413_+	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|611aa|up_2|NC_021577.1_3697475_3699308_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|89aa|up_1|NC_021577.1_3699589_3699856_+	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|375aa|up_0|NC_021577.1_3699888_3701013_-	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|53aa|down_0|NC_021577.1_3701272_3701431_-	pfam11752, DUF3309, Protein of unknown function (DUF3309)	DEDDh|209aa|down_1|NC_021577.1_3701539_3702166_-	PRK09145, PRK09145, 3'-5' exonuclease	NA|600aa|down_2|NC_021577.1_3702162_3703962_-	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	NA|552aa|down_3|NC_021577.1_3704051_3705707_-	PRK09395, actP, cation/acetate symporter ActP	NA|104aa|down_4|NC_021577.1_3705703_3706015_-	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|286aa|down_5|NC_021577.1_3706232_3707090_-	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|74aa|down_6|NC_021577.1_3707383_3707605_+	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|454aa|down_7|NC_021577.1_3707747_3709109_+	NA	NA|268aa|down_8|NC_021577.1_3709112_3709916_+	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|286aa|down_9|NC_021577.1_3710055_3710913_+	COG1741, COG1741, Pirin-related protein [General function prediction only]
