The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	1093572	1100274	3362228		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005483011.1|1093572_1094712_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
WP_020840182.1|1094729_1095980_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	48.2	1.6e-98
WP_005482986.1|1096107_1096557_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_020840183.1|1096564_1097689_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	8.9e-48
WP_005483039.1|1097701_1098355_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_020840184.1|1098524_1099634_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	2.0e-63
WP_005440184.1|1099803_1100274_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 2
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	1542537	1552342	3362228	tRNA	Mycobacterium_phage(16.67%)	8	NA	NA
WP_020840366.1|1542537_1545624_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	49.9	3.8e-88
WP_017448307.1|1545698_1546325_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_020840367.1|1546331_1547681_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	42.1	6.4e-85
WP_020840368.1|1547772_1549080_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	42.8	2.2e-90
WP_020840369.1|1549273_1550173_+	N-acetylmuramidase family protein	NA	K4RM41	Pseudomonas_phage	43.0	2.2e-36
WP_079855457.1|1550147_1550591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015296513.1|1550725_1550992_+	DksA/TraR family C4-type zinc finger protein	NA	A0A1S6UBD1	Serratia_phage	47.7	3.6e-16
WP_020840371.1|1551061_1552342_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.3e-21
>prophage 3
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	2015331	2025319	3362228		Vibrio_phage(90.91%)	12	NA	NA
WP_020840615.1|2015331_2015697_+	phage protein	NA	Q9MCC4	Vibrio_phage	90.1	2.8e-59
WP_020840616.1|2015742_2016651_-	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_020840618.1|2017281_2018667_-	toxin	NA	Q783T9	Vibrio_phage	99.8	2.1e-264
WP_005477634.1|2018671_2019016_-	DUF2523 domain-containing protein	NA	Q783U0	Vibrio_phage	100.0	5.0e-58
WP_041170644.1|2019017_2020124_-	hypothetical protein	NA	Q783U1	Vibrio_phage	89.1	6.5e-152
WP_005477614.1|2020700_2020946_-	hypothetical protein	NA	Q783U2	Vibrio_phage	100.0	4.3e-32
WP_005477619.1|2020951_2021182_-	hypothetical protein	NA	Q783U3	Vibrio_phage	100.0	1.6e-36
WP_005477647.1|2021185_2021545_-	DUF1293 family protein	NA	Q783U4	Vibrio_phage	100.0	9.1e-63
WP_020840620.1|2021548_2022757_-	replication initiation factor family	NA	Q783T8	Vibrio_phage	98.8	5.2e-243
WP_005477640.1|2022680_2022896_-	hypothetical protein	NA	A0A1W6UGD1	Vibrio_phage	98.6	3.1e-34
WP_005490072.1|2023052_2023421_+	hypothetical protein	NA	Q9MCC3	Vibrio_phage	98.3	3.3e-60
WP_020840621.1|2023588_2025319_-	response regulator	NA	A0A1V0SGX0	Hokovirus	31.5	1.2e-43
>prophage 4
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	2365178	2388057	3362228	capsid,terminase,portal	Vibrio_phage(88.24%)	21	NA	NA
WP_020840878.1|2365178_2365685_-	hypothetical protein	NA	M4MCN4	Vibrio_phage	41.3	1.3e-14
WP_020840879.1|2365707_2366385_-	hypothetical protein	NA	M4M9K5	Vibrio_phage	39.0	5.6e-29
WP_020840880.1|2366377_2366794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021822615.1|2366812_2369308_-	fibronectin type III family protein	NA	M4M9M2	Vibrio_phage	36.0	1.7e-30
WP_020840882.1|2369308_2370919_-	hypothetical protein	NA	M4MHD1	Vibrio_phage	46.2	8.4e-132
WP_020840883.1|2370918_2371143_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020840884.1|2371264_2372125_-	DUF4376 domain-containing protein	NA	A0A2I7RB39	Vibrio_phage	44.3	5.4e-29
WP_020840885.1|2372121_2376492_-	hypothetical protein	NA	M4M9Z4	Vibrio_phage	36.2	4.3e-154
WP_020840886.1|2376511_2377183_-	hypothetical protein	NA	M4M9I0	Vibrio_phage	38.9	9.1e-40
WP_020840887.1|2377191_2377770_-	hypothetical protein	NA	A0A1B1ITE9	uncultured_Mediterranean_phage	28.9	4.2e-09
WP_020840888.1|2377769_2378234_-	hypothetical protein	NA	M4MB04	Vibrio_phage	36.8	3.0e-18
WP_020840889.1|2378348_2378795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020840890.1|2378854_2380078_-|capsid	N4-gp56 family major capsid protein	capsid	M4M9G4	Vibrio_phage	75.1	5.9e-170
WP_127891399.1|2380092_2381205_-	hypothetical protein	NA	M4M9I4	Vibrio_phage	40.1	2.2e-46
WP_020840892.1|2381412_2381898_-	hypothetical protein	NA	M4MH86	Vibrio_phage	46.0	1.3e-35
WP_020840893.1|2381924_2382242_-	hypothetical protein	NA	G4WAN4	Salmonella_phage	39.0	2.2e-12
WP_020840894.1|2382246_2382759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020840895.1|2382778_2384884_-|portal	portal protein	portal	M4MB09	Vibrio_phage	70.3	1.5e-261
WP_041170708.1|2384895_2386626_-|terminase	terminase	terminase	M4MCI5	Vibrio_phage	55.6	6.4e-186
WP_020840897.1|2386678_2387596_-	hypothetical protein	NA	M4M9G7	Vibrio_phage	21.4	6.7e-09
WP_020840898.1|2387634_2388057_-	hypothetical protein	NA	M4M9H1	Vibrio_phage	60.3	3.7e-39
>prophage 5
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	2397495	2407706	3362228	integrase	Vibrio_phage(62.5%)	17	2399685:2399699	2409437:2409451
WP_020840924.1|2397495_2398305_-	hypothetical protein	NA	A0A2R2ZGJ9	Clostridioides_phage	38.0	2.7e-22
WP_020840925.1|2398348_2398540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020840926.1|2398542_2398692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020840927.1|2398699_2399005_-	DUF4406 domain-containing protein	NA	A0A0U2SAZ1	Escherichia_phage	45.1	7.3e-13
WP_020840928.1|2399001_2399403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020840929.1|2399465_2399831_-	hypothetical protein	NA	NA	NA	NA	NA
2399685:2399699	attL	GTTGCTGGTGGCTTC	NA	NA	NA	NA
WP_139128357.1|2399827_2400337_-	hypothetical protein	NA	M4PMR5	Vibrio_phage	34.4	6.7e-19
WP_020840931.1|2400257_2401217_-	hypothetical protein	NA	A0A1C9LVZ5	Vibrio_phage	34.7	3.3e-11
WP_020840932.1|2401291_2401606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139128358.1|2401894_2402533_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_025541885.1|2402877_2403285_+	hypothetical protein	NA	R9TMP0	Vibrio_phage	47.8	1.0e-22
WP_020840935.1|2403298_2404123_+	DUF2303 family protein	NA	R9TRN9	Vibrio_phage	42.2	1.4e-58
WP_020840936.1|2404188_2405313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020840937.1|2405309_2405936_+	adenine methylase	NA	A0A2I7RS54	Vibrio_phage	60.0	4.1e-58
WP_020840938.1|2405920_2406130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043043188.1|2406222_2406564_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_020840940.1|2406545_2407706_-|integrase	site-specific integrase	integrase	B6ET93	Enterobacteria_phage	30.3	2.8e-44
2409437:2409451	attR	GAAGCCACCAGCAAC	NA	NA	NA	NA
>prophage 6
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	2710620	2743303	3362228	capsid,tail,portal,head,terminase,integrase	Vibrio_phage(88.24%)	39	2712893:2712909	2750121:2750137
WP_020841088.1|2710620_2712570_-	acyltransferase	NA	A0A193GZ69	Enterobacter_phage	34.6	5.3e-88
2712893:2712909	attL	TCTGGCTTTGCCGCCAA	NA	NA	NA	NA
WP_020841089.1|2713345_2713543_-	hypothetical protein	NA	A0A2I7RNJ8	Vibrio_phage	84.6	1.8e-20
WP_020841090.1|2713544_2714240_-	hypothetical protein	NA	A0A2I7RNK2	Vibrio_phage	88.7	3.7e-121
WP_020841091.1|2714230_2714920_-	hypothetical protein	NA	A0A2I7RNK1	Vibrio_phage	85.2	6.1e-116
WP_020841092.1|2714933_2715470_-	hypothetical protein	NA	A0A2I7RNK5	Vibrio_phage	86.4	8.0e-79
WP_020841093.1|2715472_2715730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020841095.1|2718241_2718844_-	hypothetical protein	NA	A0A2I7RNJ4	Vibrio_phage	88.0	1.6e-104
WP_020841096.1|2718830_2720018_-	hypothetical protein	NA	A0A2I7RNJ7	Vibrio_phage	86.1	4.1e-200
WP_020841097.1|2720010_2720358_-	DUF2590 family protein	NA	A0A2I7RNH9	Vibrio_phage	90.4	6.5e-50
WP_020841098.1|2720357_2722244_-|tail	phage tail tape measure protein	tail	A0A1D9C9V3	Salinivibrio_phage	61.2	2.5e-228
WP_020841100.1|2722454_2722718_-	hypothetical protein	NA	A0A2I7RNJ9	Vibrio_phage	79.3	3.0e-31
WP_020841101.1|2722714_2722996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020841102.1|2722996_2723581_-	hypothetical protein	NA	A0A1D9CA16	Salinivibrio_phage	56.7	2.2e-53
WP_020841103.1|2723586_2724009_-	hypothetical protein	NA	M4M9N1	Vibrio_phage	61.3	8.5e-44
WP_020841104.1|2724005_2724224_-	hypothetical protein	NA	A0A2I7RNJ6	Vibrio_phage	72.3	2.2e-19
WP_020841105.1|2724251_2724707_-	DUF2597 family protein	NA	A0A2I7RNI0	Vibrio_phage	95.4	2.6e-78
WP_020841106.1|2724710_2725841_-	DUF2586 family protein	NA	A0A2I7RNI8	Vibrio_phage	86.7	3.6e-190
WP_020841107.1|2725856_2726513_-	virion morphogenesis protein	NA	A0A2I7RNI6	Vibrio_phage	91.3	4.1e-109
WP_020841108.1|2726496_2726991_-|tail	phage tail protein	tail	A0A2I7RNH2	Vibrio_phage	92.7	6.4e-83
WP_020841109.1|2726987_2727407_-|head	head completion/stabilization protein	head	A0A2I7RNH7	Vibrio_phage	82.0	7.9e-58
WP_020841110.1|2727517_2728234_-|terminase	terminase	terminase	A0A2I7RNJ0	Vibrio_phage	83.6	6.8e-118
WP_020841111.1|2728246_2729260_-|capsid	phage major capsid protein, P2 family	capsid	A0A2I7RNH6	Vibrio_phage	91.1	5.4e-177
WP_020841112.1|2729273_2730164_-	hypothetical protein	NA	A0A2I7RNH1	Vibrio_phage	57.1	8.0e-68
WP_020841113.1|2730339_2732121_+|terminase	terminase	terminase	A0A2I7RNI3	Vibrio_phage	91.6	9.8e-312
WP_020841114.1|2732117_2733143_+|portal	phage portal protein	portal	A0A2I7RNI9	Vibrio_phage	74.6	1.4e-145
WP_020841115.1|2733504_2734233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079855376.1|2734372_2734825_+	transcriptional regulator	NA	A0A2I7RNG8	Vibrio_phage	77.2	2.7e-64
WP_020841118.1|2734825_2735128_-	hypothetical protein	NA	Q8HA64	Vibrio_phage	61.1	1.7e-14
WP_020841119.1|2735431_2737945_-	replication endonuclease	NA	A0A166YHE2	Vibrio_phage	61.3	9.6e-292
WP_020841120.1|2737944_2738169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020841121.1|2738165_2738708_-	DNA methyltransferase	NA	U3PDF3	Vibrio_phage	83.4	1.7e-84
WP_020841122.1|2738718_2739126_-	hypothetical protein	NA	A0A2I7RNG1	Vibrio_phage	61.7	3.6e-39
WP_020841123.1|2739122_2739677_-	hypothetical protein	NA	U3PB56	Vibrio_phage	45.6	3.5e-29
WP_020841124.1|2739756_2740107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079757863.1|2740116_2740638_-	transcriptional regulator	NA	A0A2I7RNI1	Vibrio_phage	82.7	1.2e-76
WP_020841127.1|2740808_2741009_-	hypothetical protein	NA	A0A1D9C9M5	Salinivibrio_phage	61.5	8.4e-18
WP_020841128.1|2741201_2741801_+	phage repressor protein CI	NA	A0A2I7RNF9	Vibrio_phage	55.3	1.3e-58
WP_020841129.1|2741831_2742269_+	hypothetical protein	NA	U3PDE6	Vibrio_phage	30.7	2.3e-12
WP_020841130.1|2742268_2743303_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2I7RNH5	Vibrio_phage	91.2	3.3e-182
2750121:2750137	attR	TCTGGCTTTGCCGCCAA	NA	NA	NA	NA
>prophage 7
NC_021847	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome I, complete sequence	3362228	3154556	3171945	3362228	tRNA	Klosneuvirus(18.18%)	15	NA	NA
WP_005455546.1|3154556_3157139_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
WP_005455548.1|3157281_3157749_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_005478550.1|3157872_3158916_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_020841267.1|3159116_3159599_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.1	8.3e-27
WP_020841268.1|3159683_3162245_+	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	24.8	2.0e-34
WP_041170661.1|3162323_3163310_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.2	6.9e-36
WP_005455560.1|3163387_3164311_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005455562.1|3164325_3164952_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_020841269.1|3164951_3165728_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	6.6e-66
WP_020841270.1|3165727_3166771_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005380896.1|3166817_3167294_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_020841271.1|3167311_3168016_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	25.0	2.0e-05
WP_005455577.1|3168017_3168299_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005455579.1|3168924_3170226_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455581.1|3170304_3171945_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
>prophage 1
NC_021821	Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome II, complete sequence	1861334	1368655	1378523	1861334	coat,transposase	Vibrio_phage(83.33%)	16	NA	NA
WP_029854238.1|1368655_1369024_-	hypothetical protein	NA	Q858Q3	Vibrio_phage	71.2	1.6e-41
WP_020842134.1|1369146_1369419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005488200.1|1369421_1369637_+	hypothetical protein	NA	A0A1W6UGD1	Vibrio_phage	98.6	1.8e-34
WP_020842135.1|1369560_1370769_+	replication initiation factor family	NA	Q7DKP2	Vibrio_phage	99.5	1.4e-243
WP_015975173.1|1370772_1371126_+	DUF1293 family protein	NA	O88148	Vibrio_phage	100.0	2.9e-61
WP_020842136.1|1371137_1371383_+	hypothetical protein	NA	A0A1W6UH23	Vibrio_phage	98.8	1.0e-36
WP_015975175.1|1371393_1371627_+|coat	major coat protein	coat	O88142	Vibrio_phage	100.0	1.0e-30
WP_020842138.1|1371758_1373288_+	methyl-accepting chemotaxis protein	NA	O88107	Vibrio_phage	93.2	8.2e-153
WP_015975177.1|1373289_1373604_+	DUF2523 domain-containing protein	NA	O88125	Vibrio_phage	100.0	8.0e-47
WP_020842139.1|1373600_1374743_+	assembly protein	NA	O88128	Vibrio_phage	99.2	1.1e-213
WP_020842140.1|1375146_1375470_+	hypothetical protein	NA	Q5QF73	Pseudomonas_virus	57.5	8.9e-17
WP_020842141.1|1375462_1375744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020842142.1|1375830_1376331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139148879.1|1376293_1376584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020842144.1|1376608_1376983_-	phage protein	NA	Q9MCC4	Vibrio_phage	78.5	9.2e-50
WP_089183838.1|1377319_1378523_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	31.0	1.7e-28
