assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000439555.1_ASM43955v1	NC_021712	Alteromonas mediterranea U8, complete genome	1	1115390-1115484	1	CRISPRCasFinder	no		DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	Orphan	TTTCATAATTATATTTTAATTCCATATTGCTTAT	34	1	1	1115424-1115450	NC_021712.1_1115722-1115696	NA	1	1	Orphan	DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	NA|101aa|up_0|NC_021712.1_1113472_1113775_-,NA|133aa|down_4|NC_021712.1_1120093_1120492_-	NA|261aa|up_9|NC_021712.1_1105290_1106073_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|70aa|up_8|NC_021712.1_1106074_1106284_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]	NA|165aa|up_7|NC_021712.1_1106358_1106853_+	PRK13165, PRK13165, cytochrome c maturation protein CcmE	NA|686aa|up_6|NC_021712.1_1106856_1108914_+	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]	NA|220aa|up_5|NC_021712.1_1108913_1109573_+	cd03010, TlpA_like_DsbE, TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif	NA|145aa|up_4|NC_021712.1_1109665_1110100_+	pfam03918, CcmH, Cytochrome C biogenesis protein	NA|429aa|up_3|NC_021712.1_1110096_1111383_+	COG4235, COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]	NA|305aa|up_2|NC_021712.1_1111385_1112300_+	pfam04333, MlaA, MlaA lipoprotein	NA|341aa|up_1|NC_021712.1_1112453_1113476_-	PLN02240, PLN02240, UDP-glucose 4-epimerase	NA|101aa|up_0|NC_021712.1_1113472_1113775_-	NA	NA|373aa|down_0|NC_021712.1_1115676_1116795_-	TIGR01010, BexC_CtrB_KpsE, polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family	NA|225aa|down_1|NC_021712.1_1116806_1117481_-	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|260aa|down_2|NC_021712.1_1117477_1118257_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|610aa|down_3|NC_021712.1_1118259_1120089_-	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains    SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]	NA|133aa|down_4|NC_021712.1_1120093_1120492_-	NA	NA|354aa|down_5|NC_021712.1_1120985_1122047_+	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	NA|296aa|down_6|NC_021712.1_1122159_1123047_+	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	NA|293aa|down_7|NC_021712.1_1123043_1123922_+	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase	NA|297aa|down_8|NC_021712.1_1124212_1125103_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|105aa|down_9|NC_021712.1_1125182_1125497_-	pfam12836, HHH_3, Helix-hairpin-helix motif
GCF_000439555.1_ASM43955v1	NC_021712	Alteromonas mediterranea U8, complete genome	2	1630380-1630474	2	CRISPRCasFinder	no		DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	Orphan	AAAGCCCTCTTATTGAGGGCTTTTTC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	NA,NA	NA|256aa|up_9|NC_021712.1_1614485_1615253_-	TIGR01963, D-beta-hydroxybutyrate_dehydrogenase, 3-hydroxybutyrate dehydrogenase	NA|354aa|up_8|NC_021712.1_1615245_1616307_-	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family	NA|478aa|up_7|NC_021712.1_1616303_1617737_-	PRK06765, PRK06765, homoserine O-acetyltransferase; Provisional	NA|432aa|up_6|NC_021712.1_1617801_1619097_-	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]	NA|793aa|up_5|NC_021712.1_1619411_1621790_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|223aa|up_4|NC_021712.1_1621990_1622659_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1122aa|up_3|NC_021712.1_1622699_1626065_-	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|208aa|up_2|NC_021712.1_1626325_1626949_+	PRK14150, PRK14150, heat shock protein GrpE; Provisional	NA|643aa|up_1|NC_021712.1_1627066_1628995_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|378aa|up_0|NC_021712.1_1629225_1630359_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|161aa|down_0|NC_021712.1_1630882_1631365_+	pfam01322, Cytochrom_C_2, Cytochrome C'	NA|859aa|down_1|NC_021712.1_1631812_1634389_+	cd01948, EAL, EAL domain	NA|635aa|down_2|NC_021712.1_1634536_1636441_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)	NA|228aa|down_3|NC_021712.1_1636659_1637343_-	COG3658, COG3658, Cytochrome b [Energy production and conversion]	NA|268aa|down_4|NC_021712.1_1637764_1638568_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|377aa|down_5|NC_021712.1_1638919_1640050_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|1074aa|down_6|NC_021712.1_1640063_1643285_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|159aa|down_7|NC_021712.1_1643402_1643879_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|180aa|down_8|NC_021712.1_1644140_1644680_+	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|131aa|down_9|NC_021712.1_1644765_1645158_+	pfam11528, DUF3224, Protein of unknown function (DUF3224)
GCF_000439555.1_ASM43955v1	NC_021712	Alteromonas mediterranea U8, complete genome	3	1782844-1782938	3	CRISPRCasFinder	no		DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	Orphan	GTTCTAAGCTTCTTCTTTATTTGTTATTTGTTCA	34	1	1	1782878-1782904	NC_021712.1_1782626-1782600	NA	1	1	Orphan	DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	NA,NA|252aa|down_3|NC_021712.1_1786423_1787179_+,NA|137aa|down_4|NC_021712.1_1787179_1787590_-,NA|190aa|down_6|NC_021712.1_1789074_1789644_-	NA|358aa|up_9|NC_021712.1_1772083_1773157_-	pfam11279, DUF3080, Protein of unknown function (DUF3080)	NA|250aa|up_8|NC_021712.1_1773153_1773903_-	PRK09135, PRK09135, pteridine reductase; Provisional	NA|295aa|up_7|NC_021712.1_1773955_1774840_-	pfam03881, Fructosamin_kin, Fructosamine kinase	NA|639aa|up_6|NC_021712.1_1775298_1777215_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|180aa|up_5|NC_021712.1_1777330_1777870_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|66aa|up_4|NC_021712.1_1777988_1778186_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|119aa|up_3|NC_021712.1_1778204_1778561_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|124aa|up_2|NC_021712.1_1778710_1779082_-	cd03041, GST_N_2GST_N, GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins	NA|485aa|up_1|NC_021712.1_1779493_1780948_-	TIGR03023, Sugar_transferase	NA|402aa|up_0|NC_021712.1_1781626_1782832_+	pfam10082, BBP2_2, Putative beta-barrel porin 2	NA|154aa|down_0|NC_021712.1_1782976_1783438_+	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains    SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]	NA|739aa|down_1|NC_021712.1_1783464_1785681_+	TIGR01005, Putative_tyrosine-protein_kinase_EpsB, exopolysaccharide transport protein family	NA|247aa|down_2|NC_021712.1_1785690_1786431_+	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|252aa|down_3|NC_021712.1_1786423_1787179_+	NA	NA|137aa|down_4|NC_021712.1_1787179_1787590_-	NA	NA|469aa|down_5|NC_021712.1_1787623_1789030_-	pfam04932, Wzy_C, O-Antigen ligase	NA|190aa|down_6|NC_021712.1_1789074_1789644_-	NA	NA|646aa|down_7|NC_021712.1_1789776_1791714_-	pfam16448, LapD_MoxY_N, LapD/MoxY periplasmic domain	NA|243aa|down_8|NC_021712.1_1791713_1792442_-	COG3672, COG3672, Predicted transglutaminase-like cysteine proteinase [General    function prediction only]	NA|380aa|down_9|NC_021712.1_1792739_1793879_+	cd03811, GT4_GT28_WabH-like, family 4 and family 28 glycosyltransferases similar to Klebsiella WabH
GCF_000439555.1_ASM43955v1	NC_021712	Alteromonas mediterranea U8, complete genome	4	2929471-2929563	4	CRISPRCasFinder	no		DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	Orphan	AATAAAATATCCTCTTTTAAATTATTTAGAATTA	34	1	1	2929505-2929529	NC_021712.1_2929274-2929250	NA	1	1	Orphan	DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	NA,NA|232aa|down_0|NC_021712.1_2929605_2930301_+	NA|221aa|up_9|NC_021712.1_2916779_2917442_-	PRK09289, PRK09289, riboflavin synthase	NA|380aa|up_8|NC_021712.1_2917462_2918602_-	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|150aa|up_7|NC_021712.1_2918645_2919095_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|419aa|up_6|NC_021712.1_2919198_2920455_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|343aa|up_5|NC_021712.1_2920609_2921638_-	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|556aa|up_4|NC_021712.1_2921941_2923609_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|136aa|up_3|NC_021712.1_2923772_2924180_+	pfam07238, PilZ, PilZ domain	NA|456aa|up_2|NC_021712.1_2924244_2925612_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|842aa|up_1|NC_021712.1_2925802_2928328_+	pfam07238, PilZ, PilZ domain	NA|328aa|up_0|NC_021712.1_2928424_2929408_-	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|232aa|down_0|NC_021712.1_2929605_2930301_+	NA	NA|281aa|down_1|NC_021712.1_2930318_2931161_-	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|213aa|down_2|NC_021712.1_2931232_2931871_-	TIGR00558, Pyridoxine/pyridoxamine_5'-phosphate_oxidase, pyridoxamine-phosphate oxidase	NA|304aa|down_3|NC_021712.1_2931972_2932884_-	PRK00089, era, GTPase Era; Reviewed	NA|229aa|down_4|NC_021712.1_2932903_2933590_-	PRK00102, rnc, ribonuclease III; Reviewed	NA|301aa|down_5|NC_021712.1_2933589_2934492_-	PRK10861, PRK10861, signal peptidase I	NA|599aa|down_6|NC_021712.1_2934491_2936288_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|149aa|down_7|NC_021712.1_2936486_2936933_-	pfam04246, RseC_MucC, Positive regulator of sigma(E), RseC/MucC	NA|369aa|down_8|NC_021712.1_2936944_2938051_-	PRK09455, rseB, anti-sigma E factor; Provisional	NA|194aa|down_9|NC_021712.1_2938246_2938828_-	PRK10863, PRK10863, anti-sigma-E factor RseA
GCF_000439555.1_ASM43955v1	NC_021712	Alteromonas mediterranea U8, complete genome	5	3307561-3307658	5	CRISPRCasFinder	no		DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	Orphan	AAAAATAATTATCTTTTAATATGCAACACATCAC	34	1	1	3307595-3307624	NC_021712.1_3307864-3307835	NA	1	1	Orphan	DEDDh,DinG,WYL,cas3,Cas9_archaeal,csa3,PrimPol	NA,NA|56aa|down_1|NC_021712.1_3309062_3309230_-	NA|230aa|up_9|NC_021712.1_3295903_3296593_+	COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]	NA|219aa|up_8|NC_021712.1_3296679_3297336_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|410aa|up_7|NC_021712.1_3297581_3298811_+	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|249aa|up_6|NC_021712.1_3298954_3299701_-	pfam04338, DUF481, Protein of unknown function, DUF481	NA|268aa|up_5|NC_021712.1_3299915_3300719_-	pfam04338, DUF481, Protein of unknown function, DUF481	NA|275aa|up_4|NC_021712.1_3300854_3301679_-	pfam08668, HDOD, HDOD domain	NA|99aa|up_3|NC_021712.1_3301699_3301996_-	COG3313, COG3313, Predicted Fe-S protein [General function prediction only]	NA|237aa|up_2|NC_021712.1_3302199_3302910_-	COG2859, COG2859, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1041aa|up_1|NC_021712.1_3303087_3306210_-	pfam00873, ACR_tran, AcrB/AcrD/AcrF family	NA|429aa|up_0|NC_021712.1_3306209_3307496_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|357aa|down_0|NC_021712.1_3307995_3309066_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|56aa|down_1|NC_021712.1_3309062_3309230_-	NA	NA|474aa|down_2|NC_021712.1_3309640_3311062_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|685aa|down_3|NC_021712.1_3311194_3313249_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|892aa|down_4|NC_021712.1_3313270_3315946_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|249aa|down_5|NC_021712.1_3316156_3316903_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|290aa|down_6|NC_021712.1_3317242_3318112_-	PRK10987, PRK10987, beta-lactamase regulator AmpE	NA|179aa|down_7|NC_021712.1_3318142_3318679_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|173aa|down_8|NC_021712.1_3318854_3319373_+	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|285aa|down_9|NC_021712.1_3319392_3320247_+	PRK09016, PRK09016, carboxylating nicotinate-nucleotide diphosphorylase
