assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000441535.1_ASM44153v1	NC_021900	Streptococcus lutetiensis 033, complete sequence	1	844804-848553	1	CRT	no		cas3,DEDDh,csa3,csm6,csn2,cas2,cas1,cas9,DinG	Orphan	AATCNGTATCTGAATCAG	18	8	8	846634-846651|846814-846831|846850-846867|847246-847263|847282-847299|847390-847407|847498-847515|847534-847551	NC_021900.1_844018-844035|NC_021900.1_844798-844815|NC_021900.1_844018-844035|NC_021900.1_844798-844815|NC_021900.1_844018-844035|NC_021900.1_844018-844035|NC_021900.1_844798-844815|NC_021900.1_844018-844035	NA	76	76	Orphan	cas3,DEDDh,csa3,csm6,csn2,cas2,cas1,cas9,DinG	NA|54aa|up_7|NC_021900.1_833236_833398_+,NA|72aa|up_6|NC_021900.1_833413_833629_+,NA|140aa|up_5|NC_021900.1_833646_834066_+,NA|99aa|up_4|NC_021900.1_834073_834370_+,NA|48aa|down_4|NC_021900.1_856410_856554_-	NA|501aa|up_9|NC_021900.1_830409_831912_+	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|453aa|up_8|NC_021900.1_831878_833237_+	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|54aa|up_7|NC_021900.1_833236_833398_+	NA	NA|72aa|up_6|NC_021900.1_833413_833629_+	NA	NA|140aa|up_5|NC_021900.1_833646_834066_+	NA	NA|99aa|up_4|NC_021900.1_834073_834370_+	NA	NA|293aa|up_3|NC_021900.1_834396_835275_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|331aa|up_2|NC_021900.1_835280_836273_+	PRK09814, PRK09814, sugar transferase	NA|579aa|up_1|NC_021900.1_840570_842307_+	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|299aa|up_0|NC_021900.1_842306_843203_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|417aa|down_0|NC_021900.1_848770_850021_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|179aa|down_1|NC_021900.1_852483_853020_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|313aa|down_2|NC_021900.1_855048_855987_-	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|62aa|down_3|NC_021900.1_856120_856306_-	PRK02289, PRK02289, 4-oxalocrotonate tautomerase; Provisional	NA|48aa|down_4|NC_021900.1_856410_856554_-	NA	NA|412aa|down_5|NC_021900.1_856623_857858_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|194aa|down_6|NC_021900.1_858450_859032_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|360aa|down_7|NC_021900.1_859068_860148_+	PRK00591, prfA, peptide chain release factor 1; Validated	NA|277aa|down_8|NC_021900.1_860147_860978_+	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|200aa|down_9|NC_021900.1_860970_861570_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]
GCF_000441535.1_ASM44153v1	NC_021900	Streptococcus lutetiensis 033, complete sequence	2	1289762-1290658	1,1,2	PILER-CR,CRISPRCasFinder,CRT	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csa3,csm6,csn2,cas2,cas1,cas9,DinG	Type II-C,Type II-A,Type II-B	GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	36,36,36	1	1	1290394-1290423	NC_021900.1_1354388-1354359	II-A,II-B:II-A,II-B:II-A,II-B	13,13,13	13	TypeII-C,TypeII-A,TypeII-B	cas3,DEDDh,csa3,csm6,csn2,cas2,cas1,cas9,DinG	NA,NA|57aa|down_7|NC_021900.1_1298958_1299129_-	NA|616aa|up_9|NC_021900.1_1278195_1280043_-	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|101aa|up_8|NC_021900.1_1280094_1280397_-	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein	NA|250aa|up_7|NC_021900.1_1280561_1281311_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|71aa|up_6|NC_021900.1_1281548_1281761_-	cd09159, PLDc_ybhO_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase ybhO and similar proteins	NA|454aa|up_5|NC_021900.1_1281947_1283309_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|481aa|up_4|NC_021900.1_1283417_1284860_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|275aa|up_3|NC_021900.1_1284959_1285784_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|159aa|up_2|NC_021900.1_1285780_1286257_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|428aa|up_1|NC_021900.1_1286249_1287533_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|612aa|up_0|NC_021900.1_1287666_1289502_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|139aa|down_0|NC_021900.1_1290747_1291164_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|136aa|down_1|NC_021900.1_1292012_1292420_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|62aa|down_2|NC_021900.1_1292433_1292619_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	csn2|222aa|down_3|NC_021900.1_1292714_1293380_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|115aa|down_4|NC_021900.1_1293366_1293711_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_5|NC_021900.1_1293707_1294574_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1374aa|down_6|NC_021900.1_1294573_1298695_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|57aa|down_7|NC_021900.1_1298958_1299129_-	NA	NA|220aa|down_8|NC_021900.1_1299125_1299785_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|down_9|NC_021900.1_1299774_1300548_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase
GCF_000441535.1_ASM44153v1	NC_021900	Streptococcus lutetiensis 033, complete sequence	3	1291266-1291896	2,3,2	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csa3,csm6,csn2,cas2,cas1,cas9,DinG	Type II-C,Type II-A,Type II-B	GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A:II-A	9,9,8	9	TypeII-C,TypeII-A,TypeII-B	cas3,DEDDh,csa3,csm6,csn2,cas2,cas1,cas9,DinG	NA,NA|57aa|down_6|NC_021900.1_1298958_1299129_-	NA|101aa|up_9|NC_021900.1_1280094_1280397_-	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein	NA|250aa|up_8|NC_021900.1_1280561_1281311_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|71aa|up_7|NC_021900.1_1281548_1281761_-	cd09159, PLDc_ybhO_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase ybhO and similar proteins	NA|454aa|up_6|NC_021900.1_1281947_1283309_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|481aa|up_5|NC_021900.1_1283417_1284860_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|275aa|up_4|NC_021900.1_1284959_1285784_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|159aa|up_3|NC_021900.1_1285780_1286257_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|428aa|up_2|NC_021900.1_1286249_1287533_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|612aa|up_1|NC_021900.1_1287666_1289502_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|139aa|up_0|NC_021900.1_1290747_1291164_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|136aa|down_0|NC_021900.1_1292012_1292420_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|62aa|down_1|NC_021900.1_1292433_1292619_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	csn2|222aa|down_2|NC_021900.1_1292714_1293380_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|115aa|down_3|NC_021900.1_1293366_1293711_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_4|NC_021900.1_1293707_1294574_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1374aa|down_5|NC_021900.1_1294573_1298695_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|57aa|down_6|NC_021900.1_1298958_1299129_-	NA	NA|220aa|down_7|NC_021900.1_1299125_1299785_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|down_8|NC_021900.1_1299774_1300548_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|243aa|down_9|NC_021900.1_1300645_1301374_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase
