The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	614647	674892	2736560	tail,integrase,tRNA,transposase,holin	Staphylococcus_phage(75.0%)	57	613536:613551	634832:634847
613536:613551	attL	ATGATAAATTAGCATT	NA	NA	NA	NA
WP_020977035.1|614647_616309_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000901752.1|616505_617141_+	endonuclease III domain-containing protein	NA	NA	NA	NA	NA
WP_000749048.1|617329_618217_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020977036.1|618367_619318_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_000365354.1|619372_620092_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000362960.1|620075_620876_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000735554.1|621011_621518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001222133.1|621679_622396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001045420.1|622564_623353_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001018677.1|623605_623980_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_000169042.1|626051_626276_-	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_000036088.1|626292_626496_-	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_001044915.1|626654_627215_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_020977037.1|627233_629636_+	Na+/H+ antiporter Mnh2 subunit A	NA	NA	NA	NA	NA
WP_000661906.1|629622_630048_+	Na+/H+ antiporter Mnh2 subunit B	NA	NA	NA	NA	NA
WP_001048985.1|630044_630389_+	Na+/H+ antiporter Mnh2 subunit C	NA	NA	NA	NA	NA
WP_000950548.1|630378_631875_+	Na+/H+ antiporter Mnh2 subunit D	NA	NA	NA	NA	NA
WP_001071971.1|631875_632358_+	Na+/H+ antiporter Mnh2 subunit E	NA	NA	NA	NA	NA
WP_000616642.1|632354_632657_+	Na+/H+ antiporter Mnh2 subunit F	NA	NA	NA	NA	NA
WP_000406615.1|632631_633069_+	Na+/H+ antiporter Mnh2 subunit G	NA	NA	NA	NA	NA
WP_000402172.1|633408_635451_+	sodium:proton antiporter	NA	NA	NA	NA	NA
634832:634847	attR	ATGATAAATTAGCATT	NA	NA	NA	NA
WP_000737654.1|636410_637340_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000889250.1|637336_638173_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_000894464.1|638166_638910_-	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
WP_000954654.1|639031_639676_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_020977038.1|639755_640508_-	M50 family metallopeptidase	NA	NA	NA	NA	NA
WP_000215385.1|640743_641508_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_001103232.1|641568_642363_-	teichoic acids export ABC transporter ATP-binding subunit TagH	NA	NA	NA	NA	NA
WP_001273058.1|642709_643522_+	teichoic acids export ABC transporter permease subunit TagG	NA	NA	NA	NA	NA
WP_001101590.1|643620_644724_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_020977039.1|644720_645782_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000832260.1|645844_646243_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
WP_020977040.1|646359_647655_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000817960.1|648075_649803_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000479279.1|650165_651395_+	nucleoside permease	NA	NA	NA	NA	NA
WP_000114226.1|651729_652134_+	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|652130_652538_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268740.1|652538_653183_+|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_072472712.1|653224_653449_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_001096355.1|653498_653849_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_020977042.1|654094_658639_+|tail	phage tail tape measure protein	tail	A0A075M036	Staphylococcus_phage	98.8	0.0e+00
WP_020977044.1|660135_663921_+	bacteriophage minor structural protein	NA	C8CH32	Staphylococcus_phage	99.4	0.0e+00
WP_001153681.1|663910_664063_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|664109_664397_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|664454_664751_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|664900_665077_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|665129_665237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|665288_665543_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|665554_666310_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000920037.1|666500_666992_+	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	100.0	3.6e-86
WP_000702263.1|669206_669557_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_020977045.1|669838_671485_+|transposase	IS1182 family transposase	transposase	A0A146ICT8	Staphylococcus_phage	100.0	1.9e-293
WP_001791826.1|671532_671793_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_042908639.1|672103_672283_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	96.6	3.5e-23
WP_001788321.1|672710_672803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001044662.1|672980_673814_+	YitT family protein	NA	NA	NA	NA	NA
WP_001080809.1|674094_674892_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 2
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	732003	739823	2736560		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|732003_733059_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|733058_733745_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|733719_734193_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|734534_734975_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637683.1|735254_735839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062976.1|735937_736651_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|736654_737074_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_020977067.1|737075_737744_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604519.1|738094_738688_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	5.8e-38
WP_020977068.1|738671_739823_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	36.5	2.4e-24
>prophage 3
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	754295	768242	2736560	transposase	uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000429011.1|754295_755213_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	6.2e-07
WP_031760357.1|755305_755407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020977045.1|755711_757358_+|transposase	IS1182 family transposase	transposase	A0A146ICT8	Staphylococcus_phage	100.0	1.9e-293
WP_000193751.1|757399_758905_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|759245_759746_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|759765_760632_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|761432_761831_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|761793_763899_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|764016_764988_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|765375_765531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|765569_766541_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245575.1|766527_767484_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616870.1|767480_768242_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	5.0e-18
>prophage 4
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	940513	987529	2736560	tRNA,transposase,protease,bacteriocin	Lactococcus_phage(33.33%)	38	NA	NA
WP_000093393.1|940513_940999_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_001180264.1|941634_942516_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000448931.1|942557_943547_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|943841_944237_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|944607_945327_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_020977132.1|945447_946434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020977133.1|946481_948290_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000093393.1|948884_949370_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000896697.1|949492_950299_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214067.1|950321_950687_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224622.1|950790_951384_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_020977134.1|951569_951917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|951933_952569_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|952585_953395_+	NAD kinase	NA	NA	NA	NA	NA
WP_020977135.1|953391_954246_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062404.1|954266_955652_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|955661_957506_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|957783_958554_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|958750_959836_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570701.1|960177_961746_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_020977136.1|961888_962647_+	esterase family protein	NA	NA	NA	NA	NA
WP_020977137.1|962812_963538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000600387.1|965124_965634_+	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_001154224.1|967850_969041_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|969018_970194_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_020977140.1|970626_972111_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_078066272.1|972091_972352_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049957.1|972351_973914_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
WP_000928413.1|974215_975019_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_020977142.1|975237_977562_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021872.1|977578_978937_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_042908661.1|979075_980587_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|981075_981645_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|981854_982073_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|982153_983140_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|983338_983515_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|983529_984132_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_042908823.1|987262_987529_+|bacteriocin	bacteriocin transporter	bacteriocin	NA	NA	NA	NA
>prophage 5
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	1021732	1030205	2736560		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861570.1|1021732_1022215_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010401.1|1022201_1023326_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174047.1|1023329_1024034_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.2	1.4e-46
WP_000848350.1|1024033_1024297_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1024298_1024970_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032747.1|1024962_1027152_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
WP_000483727.1|1027130_1028615_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	1.6e-44
WP_000030812.1|1028607_1029636_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_020977150.1|1029638_1030205_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	1.0e-28
>prophage 6
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	1539755	1548067	2736560	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1539755_1540541_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1540666_1541557_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062177.1|1541566_1542913_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_020977299.1|1543026_1544127_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.6e-09
WP_020977300.1|1544129_1544807_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1544937_1546044_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217250.1|1546267_1548067_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 7
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	1617373	1626416	2736560	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364543.1|1617373_1617892_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	2.1e-28
WP_020977314.1|1617913_1620187_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	2.8e-64
WP_000749796.1|1620389_1622669_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1622943_1623204_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1623222_1624362_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_020977315.1|1624384_1625410_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1625411_1626416_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	1757357	1820323	2736560	tRNA,transposase,protease	Staphylococcus_phage(91.3%)	61	NA	NA
WP_020977346.1|1757357_1763915_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	93.2	5.0e-300
WP_000836465.1|1764240_1764552_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_020977347.1|1764573_1766991_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_001025061.1|1767279_1768461_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1768570_1769524_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_020977348.1|1769520_1770084_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	98.9	2.4e-102
WP_020977349.1|1770203_1770605_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1771177_1772005_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_078062663.1|1772007_1772127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020977350.1|1772238_1773240_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	3.4e-184
WP_001008551.1|1773361_1773826_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_020977351.1|1773838_1775020_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493886.1|1775030_1775663_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	6.4e-112
WP_000077341.1|1775669_1776713_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	9.1e-196
WP_020977352.1|1777193_1778696_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.1e-29
WP_000221187.1|1779217_1779532_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	96.2	3.7e-52
WP_020977353.1|1779531_1780824_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	97.7	1.3e-223
WP_000163240.1|1780841_1781237_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	2.4e-72
WP_001032836.1|1781696_1782551_-	N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.1	4.9e-38
WP_000384171.1|1782826_1783051_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671047.1|1783249_1783720_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	97.4	4.4e-81
WP_001153738.1|1783832_1784276_+	competence protein ComK	NA	NA	NA	NA	NA
WP_020977354.1|1784262_1784706_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	97.3	3.5e-56
WP_020977355.1|1785003_1785639_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_000492902.1|1785805_1786426_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096494.1|1786894_1787608_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1787866_1788169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200550.1|1788424_1788790_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.2e-59
WP_020977356.1|1788786_1789140_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	96.6	7.7e-22
WP_020977357.1|1789389_1790223_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.9	1.1e-156
WP_000366163.1|1790434_1791343_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933822.1|1791467_1792661_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109912.1|1793031_1794624_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_078064595.1|1794917_1795664_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	2.1e-141
WP_000672013.1|1795668_1796142_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1796207_1796465_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_020977358.1|1796461_1797463_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	96.7	4.5e-184
WP_020977359.1|1797467_1798946_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.5	5.8e-281
WP_078066316.1|1799104_1799560_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	97.3	2.6e-78
WP_020977361.1|1799860_1800511_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	61.1	2.8e-30
WP_020977362.1|1800591_1801587_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	93.1	2.0e-67
WP_000669045.1|1801662_1802289_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	85.6	8.1e-83
WP_000627534.1|1802329_1802671_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	93.8	2.8e-53
WP_000414218.1|1802771_1803344_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.7e-24
WP_000809860.1|1803673_1803859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375478.1|1803860_1804037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000251969.1|1804743_1804980_-|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	64.1	1.0e-17
WP_001801861.1|1805124_1805220_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_000728661.1|1806160_1806604_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000731420.1|1806603_1807047_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000747798.1|1807046_1807490_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_020977363.1|1808019_1810440_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA	NA
WP_001044453.1|1810499_1811354_-	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	39.7	2.2e-06
WP_000072571.1|1811606_1812827_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	36.2	3.3e-48
WP_020977364.1|1812819_1814376_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	1.5e-287
WP_020977365.1|1814739_1815459_-|protease	serine protease	protease	A0A2H4PQP1	Staphylococcus_phage	94.6	9.9e-125
WP_020977366.1|1815633_1816350_-|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	63.0	3.8e-84
WP_042908835.1|1816472_1817192_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	93.3	1.6e-122
WP_020977368.1|1817249_1817972_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	96.7	2.1e-127
WP_020977369.1|1818096_1818804_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	96.6	1.1e-125
WP_020977370.1|1819759_1820323_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	61.9	9.6e-51
>prophage 9
NC_022222	Staphylococcus aureus subsp. aureus 6850, complete sequence	2736560	1913833	1991131	2736560	coat,protease,integrase,terminase,tRNA,transposase	Staphylococcus_phage(62.86%)	76	1974395:1974414	1989153:1989172
WP_000170162.1|1913833_1914136_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_020977399.1|1914500_1916039_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_020977400.1|1916127_1917327_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_020977401.1|1917339_1919343_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992919.1|1919346_1921539_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272064.1|1921535_1922228_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|1922399_1922702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572876.1|1922810_1924106_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_020977402.1|1924965_1926132_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434533.1|1926162_1926489_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669861.1|1926778_1926952_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|1926932_1927535_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040873.1|1927806_1928628_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
WP_020977403.1|1928620_1930090_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.9	5.9e-108
WP_020977404.1|1930273_1931350_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_020977405.1|1931369_1932164_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_042908733.1|1932235_1932343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|1932353_1933916_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_020977406.1|1934120_1935218_-	hypothetical protein	NA	U5PWM6	Bacillus_phage	34.6	1.5e-47
WP_000149686.1|1935589_1936150_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140868.1|1936202_1937132_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|1937324_1937498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021226.1|1937549_1938929_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_020977407.1|1939048_1940077_-	lactonase family protein	NA	NA	NA	NA	NA
WP_020977408.1|1940536_1940917_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_020977409.1|1940906_1942664_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
WP_020977410.1|1942770_1943616_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	33.9	1.3e-30
WP_020977411.1|1943924_1944386_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	50.4	1.2e-27
WP_020977045.1|1944354_1946001_-|transposase	IS1182 family transposase	transposase	A0A146ICT8	Staphylococcus_phage	100.0	1.9e-293
WP_020977412.1|1946287_1947658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020977413.1|1948034_1950098_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_020977414.1|1950100_1951213_-|integrase	tyrosine-type recombinase/integrase	integrase	P97010	Streptococcus_pyogenes_phage	32.2	7.8e-12
WP_000267033.1|1952272_1952446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020977415.1|1952896_1953937_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_020977416.1|1953993_1954836_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033968.1|1954832_1955390_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|1955449_1955974_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|1956094_1956658_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221650.1|1956723_1957464_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_020977417.1|1957463_1958336_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645729.1|1958332_1959013_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991298.1|1959013_1959910_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|1959906_1960287_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681969.1|1960827_1961004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|1961245_1961344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068527.1|1961543_1962830_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_020977418.1|1963395_1965162_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000953545.1|1965704_1966544_+	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	99.6	1.5e-161
WP_000595398.1|1967036_1968053_-	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	28.4	6.7e-26
WP_000791403.1|1968074_1969130_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.1e-35
WP_020977419.1|1969565_1970789_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_020977420.1|1971172_1972480_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_025174465.1|1973050_1973392_-	hypothetical protein	NA	C8CH40	Staphylococcus_phage	47.8	3.3e-22
WP_000201397.1|1973673_1973853_-	hypothetical protein	NA	NA	NA	NA	NA
1974395:1974414	attL	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
WP_000767003.1|1974871_1975564_-	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_000368755.1|1975550_1976156_-	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
WP_000708297.1|1976169_1976919_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020977422.1|1978512_1979082_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	96.8	6.6e-100
WP_020977423.1|1979078_1979420_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	99.1	4.9e-58
WP_020977424.1|1979422_1979950_-|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	98.9	4.9e-89
WP_001160678.1|1980002_1980179_-	hypothetical protein	NA	A0A1W6JQJ5	Staphylococcus_phage	100.0	7.7e-23
WP_000856046.1|1980178_1980757_-	hypothetical protein	NA	A0A1W6JQG0	Staphylococcus_phage	95.8	7.8e-80
WP_001288441.1|1980791_1981136_-	hypothetical protein	NA	A0A1W6JQF3	Staphylococcus_phage	100.0	1.4e-57
WP_020977425.1|1981846_1982488_-	mobile element-associated protein	NA	Q4ZE67	Staphylococcus_phage	92.0	3.6e-110
WP_020977426.1|1982484_1982865_-	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	96.0	3.2e-66
WP_000447470.1|1983194_1984895_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	95.2	1.3e-308
WP_001002689.1|1984908_1985778_-	primase C-terminal domain-containing protein	NA	Q4ZE74	Staphylococcus_phage	96.2	1.5e-164
WP_001103944.1|1985844_1986165_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	6.5e-20
WP_001058486.1|1986167_1986377_-	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_000708434.1|1986369_1986516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020977427.1|1986512_1986830_-	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	96.2	7.8e-50
WP_000153640.1|1986834_1987053_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
WP_000620857.1|1987225_1987900_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
WP_000179346.1|1987913_1989086_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	97.9	1.3e-219
WP_020977428.1|1989154_1990771_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	4.4e-157
1989153:1989172	attR	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
WP_000917289.1|1990846_1991131_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
