assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	1	260108-260198	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGGCCCACACCCCAACTTGCATTGCCTGTAGAA	33	1	19	260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165|260141-260165	NC_022226.1_156491-156467|NC_022226.1_360111-360087|NC_022226.1_360166-360142|NC_022226.1_627110-627086|NC_022226.1_797514-797538|NC_022226.1_797572-797596|NC_022226.1_797630-797654|NC_022226.1_797688-797712|NC_022226.1_1009912-1009936|NC_022226.1_1320082-1320058|NC_022226.1_1408647-1408671|NC_022226.1_1585528-1585552|NC_022226.1_1761591-1761567|NC_022226.1_1911413-1911437|NC_022226.1_2258745-2258769|NC_022226.1_2597889-2597865|NC_022226.1_804828-804852|NC_022226.1_1324548-1324572|NC_022226.1_2269665-2269689	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|49aa|up_4|NC_022226.1_254377_254524_+,NA	NA|699aa|up_9|NC_022226.1_248967_251064_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|156aa|up_8|NC_022226.1_251048_251516_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|93aa|up_7|NC_022226.1_251538_251817_+	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|420aa|up_6|NC_022226.1_252043_253303_+	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]	NA|352aa|up_5|NC_022226.1_253320_254376_+	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family	NA|49aa|up_4|NC_022226.1_254377_254524_+	NA	NA|348aa|up_3|NC_022226.1_254547_255591_+	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases	NA|239aa|up_2|NC_022226.1_256118_256835_+	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional	NA|342aa|up_1|NC_022226.1_256827_257853_+	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase	NA|565aa|up_0|NC_022226.1_257874_259569_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|390aa|down_0|NC_022226.1_260619_261789_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|239aa|down_1|NC_022226.1_262064_262781_+	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional	NA|342aa|down_2|NC_022226.1_262773_263799_+	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase	NA|563aa|down_3|NC_022226.1_263820_265509_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|574aa|down_4|NC_022226.1_265541_267263_+	pfam18674, TarS_C1, TarS beta-glycosyltransferase C-terminal domain 1	NA|225aa|down_5|NC_022226.1_267406_268081_+	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA	NA|585aa|down_6|NC_022226.1_268324_270079_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|247aa|down_7|NC_022226.1_270081_270822_+	PRK14084, PRK14084, DNA-binding response regulator	NA|148aa|down_8|NC_022226.1_270934_271378_+	PRK04125, PRK04125, antiholin-like protein LrgA	NA|234aa|down_9|NC_022226.1_271370_272072_+	PRK04288, PRK04288, antiholin-like protein LrgB; Provisional
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	2	400026-400127	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|70aa|up_9|NC_022226.1_390236_390446_-,NA|128aa|up_7|NC_022226.1_391270_391654_-,NA|540aa|up_5|NC_022226.1_392608_394228_-,NA|33aa|up_0|NC_022226.1_399250_399349_+,NA|221aa|down_1|NC_022226.1_401217_401880_-,NA|131aa|down_8|NC_022226.1_410271_410664_-,NA|72aa|down_9|NC_022226.1_410701_410917_+	NA|70aa|up_9|NC_022226.1_390236_390446_-	NA	NA|194aa|up_8|NC_022226.1_390623_391205_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|NC_022226.1_391270_391654_-	NA	NA|209aa|up_6|NC_022226.1_391909_392536_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|540aa|up_5|NC_022226.1_392608_394228_-	NA	NA|508aa|up_4|NC_022226.1_394342_395866_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_3|NC_022226.1_395881_396451_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_2|NC_022226.1_396942_397698_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_1|NC_022226.1_397777_399166_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|33aa|up_0|NC_022226.1_399250_399349_+	NA	NA|319aa|down_0|NC_022226.1_400143_401100_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|NC_022226.1_401217_401880_-	NA	NA|136aa|down_2|NC_022226.1_402022_402430_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NC_022226.1_402942_403521_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NC_022226.1_403520_404789_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NC_022226.1_404826_406293_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NC_022226.1_406317_407859_+	PRK00074, guaA, GMP synthase; Reviewed	NA|369aa|down_7|NC_022226.1_408370_409477_+	pfam07751, Abi_2, Abi-like protein	NA|131aa|down_8|NC_022226.1_410271_410664_-	NA	NA|72aa|down_9|NC_022226.1_410701_410917_+	NA
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	3	791979-792056	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	TTCTTTATGTTGGGGCCCCGCCA	23	1	11	792002-792033|792002-792033|792002-792033|792002-792033|792002-792033|792002-792033|792002-792033|792002-792033|792002-792033|792002-792033|792002-792033	NC_022226.1_360130-360099|NC_022226.1_360185-360154|NC_022226.1_1761610-1761579|NC_022226.1_156510-156479|NC_022226.1_627129-627098|NC_022226.1_797553-797584|NC_022226.1_797611-797642|NC_022226.1_797669-797700|NC_022226.1_1920743-1920774|NC_022226.1_2269646-2269677|NC_022226.1_2597908-2597877	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_7|NC_022226.1_782893_782998_+,NA|36aa|up_5|NC_022226.1_784430_784538_+,NA	NA|191aa|up_9|NC_022226.1_779334_779907_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NC_022226.1_780320_782852_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NC_022226.1_782893_782998_+	NA	NA|370aa|up_6|NC_022226.1_783166_784277_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NC_022226.1_784430_784538_+	NA	NA|280aa|up_4|NC_022226.1_784685_785525_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NC_022226.1_785698_786349_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NC_022226.1_786345_786582_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NC_022226.1_786850_788836_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NC_022226.1_788843_791690_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NC_022226.1_792295_793228_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NC_022226.1_793233_794073_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NC_022226.1_794080_794566_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NC_022226.1_794573_796013_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NC_022226.1_796079_797015_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NC_022226.1_798013_798925_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NC_022226.1_798921_799917_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|196aa|down_7|NC_022226.1_801534_802122_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_8|NC_022226.1_802364_803267_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_9|NC_022226.1_803969_804599_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	4	1087469-1087561	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TCATAATGATTAAAAATCAAAGAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|359aa|up_8|NC_022226.1_1078086_1079163_+,NA|36aa|up_3|NC_022226.1_1082190_1082298_+,NA|32aa|down_5|NC_022226.1_1094341_1094437_-	NA|228aa|up_9|NC_022226.1_1077403_1078087_+	TIGR03656, IsdC, heme uptake protein IsdC	NA|359aa|up_8|NC_022226.1_1078086_1079163_+	NA	NA|293aa|up_7|NC_022226.1_1079159_1080038_+	TIGR03659, heme_ABC_transporter_heme-binding_protein_isdE, heme ABC transporter, heme-binding protein isdE	NA|322aa|up_6|NC_022226.1_1080050_1081016_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|245aa|up_5|NC_022226.1_1081077_1081812_+	COG4509, COG4509, Uncharacterized protein conserved in bacteria [Function unknown]	NA|108aa|up_4|NC_022226.1_1081830_1082154_+	PRK13312, PRK13312, staphylobilin-forming heme oxygenase IsdG	NA|36aa|up_3|NC_022226.1_1082190_1082298_+	NA	NA|247aa|up_2|NC_022226.1_1082537_1083278_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|353aa|up_1|NC_022226.1_1083657_1084716_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|801aa|up_0|NC_022226.1_1084715_1087118_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|89aa|down_0|NC_022226.1_1088860_1089127_+	PRK14126, PRK14126, cell division protein ZapA; Provisional	NA|174aa|down_1|NC_022226.1_1089127_1089649_+	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only]	NA|571aa|down_2|NC_022226.1_1089721_1091434_+	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX	NA|783aa|down_3|NC_022226.1_1091443_1093792_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|105aa|down_4|NC_022226.1_1093964_1094279_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|32aa|down_5|NC_022226.1_1094341_1094437_-	NA	NA|594aa|down_6|NC_022226.1_1094602_1096384_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|205aa|down_7|NC_022226.1_1096707_1097322_+	cd03497, SQR_TypeB_1_TM, Succinate:quinone oxidoreductase (SQR) Type B subfamily 1, transmembrane subunit; composed of proteins similar to Bacillus subtilis SQR	NA|589aa|down_8|NC_022226.1_1097373_1099140_+	PRK08641, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|272aa|down_9|NC_022226.1_1099139_1099955_+	PRK08640, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	5	1868470-1868551	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGCAAGTTGGCGGGGCCACAACATAG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|33aa|up_8|NC_022226.1_1859872_1859971_-,NA|132aa|up_0|NC_022226.1_1867774_1868170_-,NA|51aa|down_0|NC_022226.1_1869003_1869156_-	NA|399aa|up_9|NC_022226.1_1858385_1859582_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|33aa|up_8|NC_022226.1_1859872_1859971_-	NA	NA|115aa|up_7|NC_022226.1_1860463_1860808_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|375aa|up_6|NC_022226.1_1860876_1862001_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_5|NC_022226.1_1862179_1862644_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|208aa|up_4|NC_022226.1_1862999_1863623_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|371aa|up_3|NC_022226.1_1863644_1864757_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|274aa|up_2|NC_022226.1_1864919_1865741_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_1|NC_022226.1_1866193_1867579_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|132aa|up_0|NC_022226.1_1867774_1868170_-	NA	NA|51aa|down_0|NC_022226.1_1869003_1869156_-	NA	NA|200aa|down_1|NC_022226.1_1869180_1869780_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|down_2|NC_022226.1_1869937_1870408_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|down_3|NC_022226.1_1870412_1871540_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|241aa|down_4|NC_022226.1_1871690_1872413_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|down_5|NC_022226.1_1872405_1873863_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|down_6|NC_022226.1_1874120_1875182_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_7|NC_022226.1_1883942_1884389_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_8|NC_022226.1_1884485_1885436_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_9|NC_022226.1_1885441_1885897_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	6	1909975-1910055	6	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	TCTATGTTGGGGCCCCGCCAACCTG	25	1	10	1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030|1910000-1910030	NC_022226.1_360012-359982|NC_022226.1_627183-627153|NC_022226.1_1009839-1009869|NC_022226.1_1110329-1110299|NC_022226.1_1320155-1320125|NC_022226.1_1585455-1585485|NC_022226.1_2258789-2258819|NC_022226.1_2547446-2547476|NC_022226.1_797441-797471|NC_022226.1_2269706-2269736	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|92aa|up_6|NC_022226.1_1904177_1904453_+,NA|129aa|up_1|NC_022226.1_1908434_1908821_-,NA|138aa|down_1|NC_022226.1_1911740_1912154_-,NA|37aa|down_2|NC_022226.1_1912182_1912293_-,NA|31aa|down_6|NC_022226.1_1915298_1915391_-	NA|419aa|up_9|NC_022226.1_1902100_1903357_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|NC_022226.1_1903359_1903560_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|NC_022226.1_1903706_1904171_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|NC_022226.1_1904177_1904453_+	NA	NA|406aa|up_5|NC_022226.1_1904730_1905948_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|NC_022226.1_1906059_1906689_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|NC_022226.1_1906678_1907722_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|NC_022226.1_1907718_1908420_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NC_022226.1_1908434_1908821_-	NA	NA|253aa|up_0|NC_022226.1_1909037_1909796_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NC_022226.1_1910323_1911310_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|NC_022226.1_1911740_1912154_-	NA	NA|37aa|down_2|NC_022226.1_1912182_1912293_-	NA	NA|244aa|down_3|NC_022226.1_1912378_1913110_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|NC_022226.1_1913111_1914425_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|NC_022226.1_1914716_1915217_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|NC_022226.1_1915298_1915391_-	NA	DEDDh|185aa|down_7|NC_022226.1_1915606_1916161_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|NC_022226.1_1916227_1917298_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|NC_022226.1_1917544_1918075_-	pfam11667, DUF3267, Putative zincin peptidase
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	7	2153694-2153774	7	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|NC_022226.1_2148565_2148796_-,NA|364aa|up_0|NC_022226.1_2152585_2153677_+,NA|35aa|down_0|NC_022226.1_2154109_2154214_-,NA|53aa|down_1|NC_022226.1_2154893_2155052_+	NA|237aa|up_9|NC_022226.1_2144176_2144887_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NC_022226.1_2145007_2145451_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NC_022226.1_2145650_2146064_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NC_022226.1_2146520_2147894_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NC_022226.1_2148565_2148796_-	NA	NA|313aa|up_4|NC_022226.1_2148826_2149765_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NC_022226.1_2150200_2150866_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NC_022226.1_2151017_2151338_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NC_022226.1_2151339_2152320_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NC_022226.1_2152585_2153677_+	NA	NA|35aa|down_0|NC_022226.1_2154109_2154214_-	NA	NA|53aa|down_1|NC_022226.1_2154893_2155052_+	NA	NA|286aa|down_2|NC_022226.1_2155709_2156567_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|NC_022226.1_2156634_2157417_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|NC_022226.1_2157648_2159454_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NC_022226.1_2160134_2161673_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NC_022226.1_2161707_2163840_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NC_022226.1_2163851_2164286_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NC_022226.1_2164285_2165392_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2485aa|down_9|NC_022226.1_2165710_2173165_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCF_000463055.1_ASM46305v1	NC_022226	Staphylococcus aureus subsp. aureus CN1, complete sequence	8	2419689-2419786	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTTCTGCGAATTTTATGAGCTAGAAAGGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_2|NC_022226.1_2417411_2417516_+,NA|35aa|down_0|NC_022226.1_2420102_2420207_-	NA|200aa|up_9|NC_022226.1_2410888_2411488_-	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|121aa|up_8|NC_022226.1_2411506_2411869_-	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467)	NA|417aa|up_7|NC_022226.1_2412123_2413374_+	pfam02388, FemAB, FemAB family	NA|244aa|up_6|NC_022226.1_2413470_2414202_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|240aa|up_5|NC_022226.1_2414198_2414918_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|260aa|up_4|NC_022226.1_2414898_2415678_-	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|480aa|up_3|NC_022226.1_2415798_2417238_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|35aa|up_2|NC_022226.1_2417411_2417516_+	NA	NA|229aa|up_1|NC_022226.1_2417669_2418356_-	PRK14119, gpmA, phosphoglyceromutase; Provisional	NA|289aa|up_0|NC_022226.1_2418682_2419549_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|35aa|down_0|NC_022226.1_2420102_2420207_-	NA	NA|437aa|down_1|NC_022226.1_2420301_2421612_+	pfam11621, Sbi-IV, C3 binding domain 4 of IgG-bind protein SBI	NA|310aa|down_2|NC_022226.1_2422146_2423076_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|316aa|down_3|NC_022226.1_2423642_2424590_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|326aa|down_4|NC_022226.1_2424591_2425569_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|156aa|down_5|NC_022226.1_2425620_2426088_-	pfam06177, QueT, QueT transporter	NA|231aa|down_6|NC_022226.1_2426098_2426791_-	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|372aa|down_7|NC_022226.1_2426801_2427917_-	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|336aa|down_8|NC_022226.1_2427894_2428902_-	PRK06256, PRK06256, biotin synthase; Validated	NA|453aa|down_9|NC_022226.1_2428903_2430262_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase
