assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000486765.2_ASM48676v2	NZ_CP012346	Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378 chromosome, complete genome	1	178335-178413	1	CRISPRCasFinder	no		cas3,PD-DExK,WYL,csa3,DEDDh,DinG	Orphan	TTGATATTAGCCTGGTGGTAATG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	NA|70aa|up_9|NZ_CP012346.1_165777_165987_+,NA	NA|70aa|up_9|NZ_CP012346.1_165777_165987_+	NA	NA|197aa|up_8|NZ_CP012346.1_165996_166587_-	PRK11001, mtlR, MltR family transcriptional regulator	NA|383aa|up_7|NZ_CP012346.1_166583_167732_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|639aa|up_6|NZ_CP012346.1_167952_169869_-	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional	NA|203aa|up_5|NZ_CP012346.1_170344_170953_+	PRK10357, PRK10357, putative glutathione S-transferase; Provisional	NA|464aa|up_4|NZ_CP012346.1_171051_172443_+	PRK04311, PRK04311, selenocysteine synthase; Provisional	NA|617aa|up_3|NZ_CP012346.1_172439_174290_+	PRK10512, PRK10512, selenocysteinyl-tRNA-specific translation factor; Provisional	NA|384aa|up_2|NZ_CP012346.1_174475_175627_+	PRK09860, PRK09860, putative alcohol dehydrogenase; Provisional	NA|294aa|up_1|NZ_CP012346.1_175698_176580_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|513aa|up_0|NZ_CP012346.1_176748_178287_+	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|652aa|down_0|NZ_CP012346.1_178516_180472_-	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown]	NA|272aa|down_1|NZ_CP012346.1_180735_181551_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|232aa|down_2|NZ_CP012346.1_181699_182395_-	PRK12347, sgbE, L-ribulose-5-phosphate 4-epimerase; Reviewed	NA|287aa|down_3|NZ_CP012346.1_182388_183249_-	PRK13210, PRK13210, L-ribulose-5-phosphate 3-epimerase	NA|217aa|down_4|NZ_CP012346.1_183253_183904_-	PRK13305, sgbH, 3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA|499aa|down_5|NZ_CP012346.1_183900_185397_-	cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|329aa|down_6|NZ_CP012346.1_185400_186387_-	cd13679, PBP2_TRAP_YiaO_like, Substrate-binding domain of 2,3-diketo-L-gulonate-binding Tripartite ATP-independent  Periplasmic transport system and related proteins; the type 2 periplasmic-binding protein fold	NA|426aa|down_7|NZ_CP012346.1_186398_187676_-	PRK15060, PRK15060, 2,3-diketo-L-gulonate transporter large permease YiaN	NA|158aa|down_8|NZ_CP012346.1_187678_188152_-	PRK09877, PRK09877, 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM; Provisional	NA|311aa|down_9|NZ_CP012346.1_188290_189223_-	pfam16154, DUF4862, Domain of unknown function (DUF4862)
GCF_000486765.2_ASM48676v2	NZ_CP012346	Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378 chromosome, complete genome	2	936049-936626	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,PD-DExK,WYL,csa3,DEDDh,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	6,9,9	9	Orphan	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	NA,NA	NA|447aa|up_9|NZ_CP012346.1_920442_921783_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|381aa|up_8|NZ_CP012346.1_921860_923003_+	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]	NA|919aa|up_7|NZ_CP012346.1_923046_925803_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|432aa|up_6|NZ_CP012346.1_925860_927156_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_5|NZ_CP012346.1_927207_929442_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|119aa|up_4|NZ_CP012346.1_929526_929883_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|267aa|up_3|NZ_CP012346.1_930898_931699_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|NZ_CP012346.1_931926_933564_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|NZ_CP012346.1_933646_934945_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|NZ_CP012346.1_935080_935752_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|NZ_CP012346.1_936723_937521_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|NZ_CP012346.1_937608_937971_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|NZ_CP012346.1_938406_940206_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|NZ_CP012346.1_940205_941918_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|NZ_CP012346.1_941993_942728_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|NZ_CP012346.1_942815_943769_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|349aa|down_6|NZ_CP012346.1_945846_946893_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_7|NZ_CP012346.1_947143_948052_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_8|NZ_CP012346.1_948061_949501_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_9|NZ_CP012346.1_949487_950093_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional
GCF_000486765.2_ASM48676v2	NZ_CP012346	Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378 chromosome, complete genome	3	945743-945830	3	CRISPRCasFinder	no		cas3,PD-DExK,WYL,csa3,DEDDh,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAAC	27	0	0	NA	NA	I-E	1	1	Orphan	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	NA,NA	NA|267aa|up_9|NZ_CP012346.1_930898_931699_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_8|NZ_CP012346.1_931926_933564_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_7|NZ_CP012346.1_933646_934945_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_6|NZ_CP012346.1_935080_935752_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|up_5|NZ_CP012346.1_936723_937521_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|up_4|NZ_CP012346.1_937608_937971_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_3|NZ_CP012346.1_938406_940206_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_2|NZ_CP012346.1_940205_941918_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_1|NZ_CP012346.1_941993_942728_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_0|NZ_CP012346.1_942815_943769_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|349aa|down_0|NZ_CP012346.1_945846_946893_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP012346.1_947143_948052_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|NZ_CP012346.1_948061_949501_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP012346.1_949487_950093_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|NZ_CP012346.1_950110_950467_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP012346.1_950657_950969_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP012346.1_950987_951698_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP012346.1_951697_952177_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP012346.1_952173_953223_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP012346.1_953203_953965_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
