assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000498395.2_ASM49839v3	NZ_CP010979	Pseudomonas putida S13.1.2, complete genome	1	566142-566215	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,WYL,cas3,RT,PD-DExK	Orphan	TCATCACCTTTACGTTAACGTAAA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT,PD-DExK	NA|104aa|up_5|NZ_CP010979.1_558012_558324_-,NA|79aa|down_1|NZ_CP010979.1_568077_568314_-	NA|252aa|up_9|NZ_CP010979.1_553844_554600_-	PRK07044, PRK07044, aldolase II superfamily protein; Provisional	NA|437aa|up_8|NZ_CP010979.1_554599_555910_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|326aa|up_7|NZ_CP010979.1_556065_557043_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|172aa|up_6|NZ_CP010979.1_557062_557578_-	pfam16220, DUF4880, Domain of unknown function (DUF4880)	NA|104aa|up_5|NZ_CP010979.1_558012_558324_-	NA	NA|236aa|up_4|NZ_CP010979.1_558412_559120_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|651aa|up_3|NZ_CP010979.1_560398_562351_-	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|272aa|up_2|NZ_CP010979.1_562347_563163_-	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated	NA|536aa|up_1|NZ_CP010979.1_563166_564774_-	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain	NA|388aa|up_0|NZ_CP010979.1_564793_565957_-	cd01156, IVD, Isovaleryl-CoA dehydrogenase	NA|561aa|down_0|NZ_CP010979.1_566278_567961_+	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|79aa|down_1|NZ_CP010979.1_568077_568314_-	NA	NA|323aa|down_2|NZ_CP010979.1_568420_569389_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|673aa|down_3|NZ_CP010979.1_569811_571830_+	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|1106aa|down_4|NZ_CP010979.1_571986_575304_+	TIGR02456, Trehalose_synthase, trehalose synthase	NA|737aa|down_5|NZ_CP010979.1_575304_577515_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|318aa|down_6|NZ_CP010979.1_578083_579037_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|359aa|down_7|NZ_CP010979.1_579154_580231_-	pfam03797, Autotransporter, Autotransporter beta-domain	NA|265aa|down_8|NZ_CP010979.1_580548_581343_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|718aa|down_9|NZ_CP010979.1_581524_583678_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX
GCF_000498395.2_ASM49839v3	NZ_CP010979	Pseudomonas putida S13.1.2, complete genome	2	3601024-3601102	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,WYL,cas3,RT,PD-DExK	Orphan	TTCAGGCCTGTGGTGATCCTGTGGGA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT,PD-DExK	NA,NA	NA|224aa|up_9|NZ_CP010979.1_3589953_3590625_+	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP	NA|247aa|up_8|NZ_CP010979.1_3590672_3591413_+	PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional	NA|262aa|up_7|NZ_CP010979.1_3591537_3592323_-	COG5424, COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C [Coenzyme metabolism]	NA|819aa|up_6|NZ_CP010979.1_3592353_3594810_-	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|611aa|up_5|NZ_CP010979.1_3595077_3596910_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|211aa|up_4|NZ_CP010979.1_3596902_3597535_-	COG3531, COG3531, Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|311aa|up_3|NZ_CP010979.1_3597538_3598471_-	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only]	NA|99aa|up_2|NZ_CP010979.1_3598580_3598877_-	pfam01722, BolA, BolA-like protein	NA|175aa|up_1|NZ_CP010979.1_3598887_3599412_-	COG3184, COG3184, Uncharacterized protein conserved in bacteria [Function unknown]	NA|465aa|up_0|NZ_CP010979.1_3599566_3600961_+	PRK12425, PRK12425, class II fumarate hydratase	NA|321aa|down_0|NZ_CP010979.1_3601136_3602099_-	pfam00892, EamA, EamA-like transporter family	NA|498aa|down_1|NZ_CP010979.1_3602353_3603847_-	TIGR03708, poly_P_AMP_trns, polyphosphate:AMP phosphotransferase	NA|655aa|down_2|NZ_CP010979.1_3603983_3605948_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|596aa|down_3|NZ_CP010979.1_3606147_3607935_+	TIGR03104, trio_amidotrans, asparagine synthase family amidotransferase	NA|582aa|down_4|NZ_CP010979.1_3607938_3609684_+	TIGR03103, trio_acet_GNAT, GNAT-family acetyltransferase TIGR03103	NA|395aa|down_5|NZ_CP010979.1_3609813_3610998_+	TIGR03106, trio_M42_hydro, hydrolase, peptidase M42 family	NA|76aa|down_6|NZ_CP010979.1_3611164_3611392_+	PRK00304, PRK00304, hypothetical protein; Provisional	NA|63aa|down_7|NZ_CP010979.1_3611506_3611695_-	PRK01712, PRK01712, carbon storage regulator CsrA	NA|270aa|down_8|NZ_CP010979.1_3611815_3612625_-	PRK05650, PRK05650, SDR family oxidoreductase	NA|51aa|down_9|NZ_CP010979.1_3612874_3613027_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)
GCF_000498395.2_ASM49839v3	NZ_CP010979	Pseudomonas putida S13.1.2, complete genome	3	4646087-4646169	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,WYL,cas3,RT,PD-DExK	Orphan	CTACAAGGCGATCGCGGTTCCCT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT,PD-DExK	NA,NA	NA|481aa|up_9|NZ_CP010979.1_4631144_4632587_-	pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/WaaP) family	NA|251aa|up_8|NZ_CP010979.1_4632586_4633339_-	pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/WaaP) family	NA|245aa|up_7|NZ_CP010979.1_4633335_4634070_-	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	NA|269aa|up_6|NZ_CP010979.1_4634069_4634876_-	PRK15123, PRK15123, lipopolysaccharide core heptose(I) kinase RfaP; Provisional	NA|375aa|up_5|NZ_CP010979.1_4634872_4635997_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|353aa|up_4|NZ_CP010979.1_4635996_4637055_-	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|350aa|up_3|NZ_CP010979.1_4637055_4638105_-	TIGR02195, ADP-heptose--LPS_heptosyltransferase_2, lipopolysaccharide heptosyltransferase II	NA|978aa|up_2|NZ_CP010979.1_4638328_4641262_-	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|882aa|up_1|NZ_CP010979.1_4641645_4644291_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|547aa|up_0|NZ_CP010979.1_4644304_4645945_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|896aa|down_0|NZ_CP010979.1_4646364_4649052_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|223aa|down_1|NZ_CP010979.1_4649220_4649889_+	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|208aa|down_2|NZ_CP010979.1_4649892_4650516_+	cd03205, GST_C_6, C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases	NA|443aa|down_3|NZ_CP010979.1_4650658_4651987_-	PRK11715, PRK11715, cell envelope integrity protein CreD	NA|479aa|down_4|NZ_CP010979.1_4652187_4653624_-	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional	NA|227aa|down_5|NZ_CP010979.1_4653623_4654304_-	PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional	NA|167aa|down_6|NZ_CP010979.1_4654541_4655042_-	COG4067, COG4067, Uncharacterized protein conserved in archaea [Posttranslational modification, protein turnover, chaperones]	NA|296aa|down_7|NZ_CP010979.1_4655224_4656112_+	PRK14014, PRK14014, putative acyltransferase; Provisional	NA|450aa|down_8|NZ_CP010979.1_4656355_4657705_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|192aa|down_9|NZ_CP010979.1_4657903_4658479_-	pfam11075, DUF2780, Protein of unknown function VcgC/VcgE (DUF2780)
