The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_022535	Rhizobium pusense, complete genome	2844565	925740	935557	2844565	portal,tail	Paracoccus_phage(33.33%)	10	NA	NA
WP_022555858.1|925740_926907_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	39.0	3.5e-63
WP_022555859.1|927095_927416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022555861.1|928151_928559_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_006700098.1|928558_928918_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_084317300.1|928914_929244_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_004440761.1|929183_929765_+|tail	phage tail tape measure protein	tail	C0LP53	Escherichia_virus	43.1	4.5e-11
WP_022555863.1|929863_930502_+	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	49.3	6.4e-51
WP_022555864.1|930498_931305_+	DUF2163 domain-containing protein	NA	A0A0K1Y6Z2	Rhodobacter_phage	37.0	1.6e-30
WP_022555865.1|931301_931736_+	C40 family peptidase	NA	F4YXU4	Roseobacter_phage	47.1	4.0e-36
WP_022555866.1|931753_935557_+|tail	glycoside hydrolase/phage tail family protein	tail	A0A0B5A7K5	Paracoccus_phage	36.8	2.2e-215
>prophage 2
NC_022535	Rhizobium pusense, complete genome	2844565	1418490	1430543	2844565	capsid	Agrobacterium_phage(78.57%)	16	NA	NA
WP_048902683.1|1418490_1418832_-	hypothetical protein	NA	A0A223W046	Agrobacterium_phage	62.5	5.1e-31
WP_022556140.1|1418824_1419895_-	hypothetical protein	NA	A0A223W0B5	Agrobacterium_phage	97.1	1.4e-188
WP_022556141.1|1419777_1420464_-	hypothetical protein	NA	A0A223W0Q1	Agrobacterium_phage	96.3	3.8e-102
WP_022556142.1|1420463_1421165_-	hypothetical protein	NA	A0A223W0X8	Agrobacterium_phage	91.0	6.4e-121
WP_022556143.1|1421168_1421606_-	hypothetical protein	NA	A0A2L0V102	Agrobacterium_phage	96.6	6.4e-26
WP_022556144.1|1421668_1422130_-	hypothetical protein	NA	A0A223W0C1	Agrobacterium_phage	94.1	2.1e-72
WP_022556145.1|1422202_1423300_-|capsid	N4-gp56 family major capsid protein	capsid	A0A2L0V108	Agrobacterium_phage	99.7	1.2e-211
WP_022556146.1|1423448_1424201_+	Secretion activator protein	NA	A0A223W052	Agrobacterium_phage	99.6	3.1e-105
WP_022556147.1|1424197_1424722_+	hypothetical protein	NA	A0A223W0D2	Agrobacterium_phage	98.3	4.5e-87
WP_022556148.1|1424721_1425054_+	hypothetical protein	NA	A0A223W041	Agrobacterium_phage	100.0	6.5e-55
WP_022556149.1|1425258_1425489_+	AlpA family phage regulatory protein	NA	A0A2L0V109	Agrobacterium_phage	98.7	5.5e-37
WP_004441749.1|1425726_1426065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006697463.1|1426380_1427469_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	50.0	7.1e-18
WP_035208907.1|1427540_1428713_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_004441759.1|1428850_1429525_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	42.7	1.1e-37
WP_022556152.1|1429517_1430543_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	28.5	2.2e-05
>prophage 3
NC_022535	Rhizobium pusense, complete genome	2844565	1591458	1599715	2844565	tRNA	uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_022556252.1|1591458_1592991_+	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	24.4	2.8e-20
WP_022556253.1|1592974_1594252_+	type III PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_048902825.1|1594252_1595410_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	43.1	1.2e-42
WP_004442089.1|1595601_1596732_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	53.0	2.1e-105
WP_022556255.1|1596731_1597814_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_022556256.1|1598076_1598586_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.1e-45
WP_004442095.1|1598622_1599192_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.8	8.5e-47
WP_006698870.1|1599220_1599715_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.7	1.5e-26
>prophage 4
NC_022535	Rhizobium pusense, complete genome	2844565	1616093	1624495	2844565	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
WP_037093448.1|1616093_1617659_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	30.4	1.1e-11
WP_022556269.1|1618003_1618657_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	35.1	1.0e-11
WP_004442133.1|1618653_1619424_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.8	1.8e-23
WP_004442134.1|1619597_1620881_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	1.8e-97
WP_022556270.1|1620982_1621786_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	40.7	2.4e-42
WP_022556271.1|1621782_1622529_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_003509722.1|1622585_1622792_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
WP_048902690.1|1622922_1623657_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.1	3.4e-40
WP_022556273.1|1623649_1624495_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.7	8.5e-35
>prophage 5
NC_022535	Rhizobium pusense, complete genome	2844565	1761573	1768497	2844565		Rhizobium_phage(66.67%)	11	NA	NA
WP_022556376.1|1761573_1762230_-	putative deoxynucleotide monophosphate kinase	NA	V9QJ84	Rhizobium_phage	44.8	1.6e-25
WP_052349964.1|1762707_1762983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022556379.1|1762988_1763189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048902829.1|1763185_1763845_-	hypothetical protein	NA	B4UTT6	Rhizobium_phage	61.8	2.7e-60
WP_052349965.1|1763913_1764279_-	hypothetical protein	NA	A4JWM9	Burkholderia_virus	65.5	5.9e-33
WP_158454197.1|1764548_1764698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556383.1|1764702_1765956_-	hypothetical protein	NA	B4UTT2	Rhizobium_phage	78.3	8.1e-183
WP_022556384.1|1766008_1766674_-	trypsin-like peptidase domain-containing protein	NA	B4UTS4	Rhizobium_phage	50.6	2.0e-31
WP_022556386.1|1767054_1767255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006697486.1|1767244_1767721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556387.1|1767723_1768497_+	SOS response-associated peptidase	NA	A0A291AUP1	Sinorhizobium_phage	39.8	7.8e-43
>prophage 6
NC_022535	Rhizobium pusense, complete genome	2844565	1783178	1822766	2844565	portal,tail,terminase,capsid,head	Rhizobium_phage(53.85%)	49	NA	NA
WP_022556408.1|1783178_1785524_-|tail	phage tail length tape measure family protein	tail	A0A2D2W291	Sinorhizobium_phage	31.8	5.1e-53
WP_144115320.1|1785538_1785913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556410.1|1786090_1786801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084317319.1|1786883_1787087_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_022556411.1|1787083_1787443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013636135.1|1787444_1787876_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_022556412.1|1787910_1788321_-	DUF3168 domain-containing protein	NA	I3UM06	Rhodobacter_phage	37.0	1.0e-09
WP_022556413.1|1788320_1788815_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_022556414.1|1788811_1789168_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_022556416.1|1789293_1789641_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_006697512.1|1789642_1789984_-	hypothetical protein	NA	A0A0H4INV0	Stenotrophomonas_phage	52.6	1.1e-06
WP_022556417.1|1789961_1790222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022556418.1|1790269_1791478_-|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	59.7	4.8e-116
WP_022556419.1|1791489_1792608_-	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	34.7	4.3e-34
WP_022556420.1|1792617_1793847_-|portal	phage portal protein	portal	A0A1V0E8B9	Vibrio_phage	36.4	4.0e-65
WP_022556421.1|1793871_1795515_-|terminase	terminase large subunit	terminase	B4UTP0	Rhizobium_phage	75.4	1.9e-224
WP_022556422.1|1795527_1795983_-	hypothetical protein	NA	B4UTN9	Rhizobium_phage	70.2	2.0e-51
WP_048902713.1|1796101_1796422_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_022556424.1|1796482_1796905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556425.1|1797213_1798158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022556426.1|1798195_1798669_-	VRR-NUC domain-containing protein	NA	B4UTZ1	Rhizobium_phage	71.8	1.3e-48
WP_022556428.1|1799036_1799984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022556429.1|1800213_1801581_-	putative transcriptional regulator	NA	Q8W6N3	Burkholderia_virus	41.5	8.2e-88
WP_022556430.1|1801661_1803884_-	bifunctional DNA primase/polymerase	NA	A0A1B1INT2	uncultured_Mediterranean_phage	35.4	7.4e-54
WP_022556431.1|1803961_1804783_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_022556432.1|1804788_1805163_-	hypothetical protein	NA	B4UTY6	Rhizobium_phage	54.4	1.1e-31
WP_022556433.1|1805159_1805393_-	hypothetical protein	NA	A0A1X9SGK7	Bradyrhizobium_phage	51.1	2.5e-05
WP_022556434.1|1805389_1806448_-	site-specific DNA-methyltransferase	NA	F4YCV3	Synechococcus_phage	52.6	3.2e-87
WP_048902834.1|1806447_1807851_-	helicase	NA	F8TUJ9	EBPR_podovirus	48.9	6.0e-118
WP_144115322.1|1807958_1808708_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556437.1|1808711_1809239_-	siphovirus Gp157 family protein	NA	NA	NA	NA	NA
WP_022556438.1|1809411_1809861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556439.1|1809893_1811648_-	DEAD/DEAH box helicase	NA	B4UTX6	Rhizobium_phage	43.9	1.3e-138
WP_022556440.1|1811707_1812199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556441.1|1812195_1812732_-	sigma-70 family RNA polymerase sigma factor	NA	B4UTX5	Rhizobium_phage	29.7	1.5e-08
WP_022556442.1|1812752_1813682_-	hypothetical protein	NA	B4UTX3	Rhizobium_phage	83.1	1.1e-155
WP_022556443.1|1813722_1814778_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	56.0	9.8e-97
WP_022556444.1|1814835_1815669_-	hypothetical protein	NA	K4FB09	Cronobacter_phage	39.2	1.4e-34
WP_022556445.1|1815729_1816308_-	DUF669 domain-containing protein	NA	NA	NA	NA	NA
WP_022556447.1|1816490_1817264_-	ATP-binding protein	NA	B4UTW5	Rhizobium_phage	80.6	9.3e-121
WP_022556448.1|1817329_1817557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022556449.1|1817696_1818008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022556450.1|1818068_1818959_-	hypothetical protein	NA	B4UTW2	Rhizobium_phage	43.3	4.2e-08
WP_022556451.1|1818958_1819240_-	hypothetical protein	NA	B4UTW1	Rhizobium_phage	61.5	7.4e-28
WP_022556452.1|1819236_1819587_-	hypothetical protein	NA	B4UTW0	Rhizobium_phage	44.4	6.3e-08
WP_048902835.1|1819782_1820292_+	hypothetical protein	NA	B4UTV8	Rhizobium_phage	44.3	2.1e-36
WP_022556454.1|1820915_1821575_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_022556456.1|1822018_1822372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048902716.1|1822514_1822766_+	hypothetical protein	NA	V9QKZ2	Rhizobium_phage	64.3	3.1e-25
>prophage 1
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	0	2246	584965		Ochrobactrum_phage(100.0%)	1	NA	NA
WP_048902998.1|1220_2246_+	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	33.5	1.0e-29
>prophage 2
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	7014	10159	584965		uncultured_Caudovirales_phage(100.0%)	4	NA	NA
WP_022557053.1|7014_7740_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	72.5	1.1e-86
WP_022557054.1|7714_8137_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	63.5	1.2e-45
WP_022557055.1|8142_9183_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_022557057.1|9628_10159_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	43.3	6.3e-28
>prophage 3
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	15131	15425	584965		Moumouvirus(100.0%)	1	NA	NA
WP_173402666.1|15131_15425_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PC92	Moumouvirus	54.5	5.6e-10
>prophage 4
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	20804	28711	584965		Aureococcus_anophage(50.0%)	4	NA	NA
WP_022557080.1|20804_23813_+	DEAD/DEAH box helicase	NA	A0A076FHE1	Aureococcus_anophage	25.7	1.5e-25
WP_022557081.1|23878_24736_+	conserved exported protein of unknown function	NA	NA	NA	NA	NA
WP_022557082.1|24732_25308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022557083.1|25309_28711_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	25.5	3.4e-42
>prophage 5
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	39414	42406	584965		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_022557097.1|39414_40437_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	49.4	2.4e-15
WP_022557098.1|40520_41294_-	SOS response-associated peptidase	NA	A0A291AUP1	Sinorhizobium_phage	38.5	1.1e-41
WP_022557099.1|41353_42406_-	ATP-dependent DNA ligase	NA	A0A068CDF3	Rhizobium_phage	62.2	5.9e-126
>prophage 6
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	57497	59654	584965		Bacillus_phage(50.0%)	3	NA	NA
WP_022557116.1|57497_58247_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	46.8	2.2e-10
WP_022557117.1|58319_58868_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_022557118.1|58922_59654_+	SDR family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	29.0	1.2e-08
>prophage 7
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	64390	72532	584965		Trichoplusia_ni_ascovirus(40.0%)	9	NA	NA
WP_022557125.1|64390_65377_+	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	24.0	3.0e-07
WP_020808317.1|65422_66232_-	SDR family NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.2	6.1e-14
WP_034499614.1|66278_66659_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_048903004.1|66815_67349_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_022557127.1|67429_68848_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	34.0	2.0e-44
WP_013637163.1|68936_69692_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.1	5.5e-17
WP_022557128.1|69958_70648_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_022557129.1|70699_71611_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_020808319.1|71704_72532_+	oxidoreductase	NA	I7B2R4	Escherichia_phage	27.8	7.4e-07
>prophage 8
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	82882	84894	584965		Pandoravirus(50.0%)	2	NA	NA
WP_034499639.1|82882_83311_+	RidA family protein	NA	S4W0G3	Pandoravirus	32.7	1.3e-07
WP_003519970.1|84684_84894_+	cold-shock protein	NA	A0A218MMZ6	uncultured_virus	54.7	1.2e-09
>prophage 9
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	93048	93810	584965		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_022557160.1|93048_93810_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.0	3.1e-12
>prophage 10
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	99508	103621	584965		Bacillus_virus(50.0%)	3	NA	NA
WP_022557167.1|99508_100573_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.0	8.2e-27
WP_048903007.1|100572_101451_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_084317464.1|101494_103621_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	38.1	7.9e-13
>prophage 11
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	109468	116886	584965		Emiliania_huxleyi_virus(25.0%)	7	NA	NA
WP_022557178.1|109468_111598_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	29.3	5.7e-35
WP_022557179.1|111702_112359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022557180.1|112433_113624_+	hypothetical protein	NA	A0A1V0DX75	Synechococcus_virus	42.2	1.5e-72
WP_034499700.1|113730_113985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022557183.1|114112_114565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022557185.1|114577_115615_+	toprim domain-containing protein	NA	A0A0U4B0G9	Pseudomonas_phage	36.6	5.1e-13
WP_022557186.1|115944_116886_+	DUF2493 domain-containing protein	NA	A0A291L9X7	Bordetella_phage	41.4	1.1e-19
>prophage 12
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	120621	120900	584965		Burkholderia_phage(100.0%)	1	NA	NA
WP_022557192.1|120621_120900_-	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	43.7	3.4e-09
>prophage 13
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	124187	125273	584965		Escherichia_phage(100.0%)	1	NA	NA
WP_052349969.1|124187_125273_+	lytic transglycosylase domain-containing protein	NA	I6ZXX9	Escherichia_phage	32.7	2.4e-05
>prophage 14
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	128452	129625	584965		Geobacillus_virus(100.0%)	1	NA	NA
WP_048903064.1|128452_129625_+	transglycosylase SLT domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	42.4	8.8e-22
>prophage 15
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	143229	143976	584965		Vibrio_phage(100.0%)	1	NA	NA
WP_048903067.1|143229_143976_+	ParA family protein	NA	Q8H9K9	Vibrio_phage	26.9	8.7e-07
>prophage 16
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	164119	165607	584965		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_048903014.1|164119_165607_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	64.5	1.7e-166
>prophage 17
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	170012	172783	584965		uncultured_virus(66.67%)	3	NA	NA
WP_006699024.1|170012_170327_+	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	56.4	1.8e-22
WP_022557254.1|170381_172007_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	60.2	2.3e-177
WP_022557256.1|172435_172783_+	hypothetical protein	NA	A0A223W0B5	Agrobacterium_phage	47.7	4.7e-24
>prophage 18
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	178518	188855	584965		uncultured_Caudovirales_phage(20.0%)	7	NA	NA
WP_022557266.1|178518_180333_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	25.4	5.6e-07
WP_022557267.1|180558_182514_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.5	1.0e-83
WP_022557268.1|182858_184481_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_022557269.1|184495_185323_-	alpha/beta fold hydrolase	NA	G9VYU4	Mycobacterium_phage	23.9	2.8e-06
WP_022557271.1|185577_186936_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_022557272.1|187007_188210_-	PLP-dependent transferase	NA	A0A0B5JD48	Pandoravirus	27.9	5.3e-14
WP_022557273.1|188231_188855_-	helix-turn-helix domain-containing protein	NA	I3VYZ1	Thermoanaerobacterium_phage	41.4	8.8e-05
>prophage 19
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	205084	206320	584965		Pandoravirus(100.0%)	1	NA	NA
WP_022557291.1|205084_206320_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	30.3	3.2e-22
>prophage 20
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	209335	211341	584965		Acanthocystis_turfacea_Chlorella_virus(50.0%)	2	NA	NA
WP_048903022.1|209335_210391_+	GDP-mannose 4,6-dehydratase	NA	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	63.8	1.0e-125
WP_048903072.1|210396_211341_+	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	51.8	5.1e-89
>prophage 21
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	217874	218953	584965	transposase	Shigella_phage(100.0%)	1	NA	NA
WP_144115367.1|217874_218953_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.6	1.2e-49
>prophage 22
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	228921	230583	584965		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_022557314.1|228921_230583_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.7	2.1e-16
>prophage 23
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	235801	239095	584965		Synechococcus_phage(33.33%)	3	NA	NA
WP_022557320.1|235801_236341_+	peroxiredoxin	NA	M1TUY3	Synechococcus_phage	52.9	9.5e-48
WP_022557322.1|237596_237917_+	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	40.2	2.2e-12
WP_022557323.1|238030_239095_+	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A141ZJV0	Faustovirus	24.2	4.5e-09
>prophage 24
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	249489	249951	584965		Erythrobacter_phage(100.0%)	1	NA	NA
WP_022557339.1|249489_249951_-	MucR family transcriptional regulator	NA	A0A1P8VVG0	Erythrobacter_phage	36.7	2.2e-13
>prophage 25
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	258680	266052	584965	transposase	Stx2-converting_phage(25.0%)	7	NA	NA
WP_022557351.1|258680_259676_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	42.1	8.2e-37
WP_158454204.1|260201_260375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022557353.1|260628_261417_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_022557354.1|261420_262335_-	nodulation factor ABC transporter ATP-binding protein NodI	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.0	2.5e-24
WP_022557355.1|262331_264047_-	Nodulation protein U	NA	A0A292GAM4	Xanthomonas_phage	30.5	3.7e-37
WP_048903028.1|264077_264761_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_022557357.1|264798_266052_-	chitooligosaccharide synthase NodC	NA	M1IKD7	Paramecium_bursaria_Chlorella_virus	27.0	1.7e-26
>prophage 26
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	269503	270602	584965	transposase	Leptospira_phage(100.0%)	1	NA	NA
WP_144115371.1|269503_270602_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.8	8.8e-48
>prophage 27
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	276131	281328	584965		Gordonia_phage(50.0%)	4	NA	NA
WP_048903029.1|276131_278117_-	acyltransferase	NA	A0A166XZF2	Gordonia_phage	30.2	2.8e-60
WP_048903080.1|278208_279132_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_022557371.1|279107_280037_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_022557291.1|280092_281328_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	30.3	3.2e-22
>prophage 28
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	287275	288771	584965		Cedratvirus(50.0%)	2	NA	NA
WP_022557376.1|287275_288007_-	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	28.0	5.0e-15
WP_048903031.1|288003_288771_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.0	1.2e-14
>prophage 29
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	304141	307475	584965		Staphylococcus_phage(66.67%)	4	NA	NA
WP_022557393.1|304141_305026_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	36.7	2.3e-30
WP_048903033.1|305031_305916_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_022557395.1|306028_306733_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.6	3.4e-13
WP_048903034.1|306725_307475_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.4	1.2e-11
>prophage 30
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	331335	332106	584965		Planktothrix_phage(100.0%)	1	NA	NA
WP_022557429.1|331335_332106_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.4	2.3e-31
>prophage 31
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	340609	348328	584965		Acanthocystis_turfacea_Chlorella_virus(25.0%)	6	NA	NA
WP_048903087.1|340609_342322_-	FAD-binding protein	NA	M1I0Y3	Acanthocystis_turfacea_Chlorella_virus	25.4	8.1e-08
WP_022557440.1|342333_343860_-	acetate CoA-transferase YdiF	NA	NA	NA	NA	NA
WP_022557441.1|343917_344709_-	SDR family NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.9	8.0e-11
WP_048903038.1|344892_346344_-	amidase	NA	NA	NA	NA	NA
WP_022557443.1|346340_347375_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.9	3.6e-19
WP_022557444.1|347371_348328_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	8.2e-10
>prophage 32
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	353093	357989	584965		Enterobacteria_phage(50.0%)	6	NA	NA
WP_022557450.1|353093_354146_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	29.0	1.8e-21
WP_022557451.1|354355_354910_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_022557452.1|354906_355650_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_022557453.1|355743_356115_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_022557454.1|356245_356395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022557455.1|356519_357989_-	FAD-binding protein	NA	A0A2P0ZL82	Lactobacillus_phage	25.8	2.8e-25
>prophage 33
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	362672	364175	584965		Planktothrix_phage(100.0%)	1	NA	NA
WP_022557462.1|362672_364175_+	amino acid ABC transporter permease/ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.9	1.1e-32
>prophage 34
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	375174	376677	584965		Staphylococcus_phage(100.0%)	1	NA	NA
WP_048903094.1|375174_376677_+	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.0	1.2e-18
>prophage 35
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	382767	384600	584965		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_048903040.1|382767_384600_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	A0A0P0CRC5	Ostreococcus_lucimarinus_virus	23.4	1.1e-23
>prophage 36
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	394107	397828	584965		Oenococcus_phage(50.0%)	3	NA	NA
WP_022557490.1|394107_395301_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	33.6	9.2e-51
WP_022557491.1|395397_396273_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_022557493.1|396850_397828_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.8	8.4e-26
>prophage 37
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	403361	404378	584965		Enterobacteria_phage(100.0%)	1	NA	NA
WP_022557498.1|403361_404378_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.9	1.8e-18
>prophage 38
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	408020	410454	584965	transposase	Escherichia_phage(50.0%)	2	NA	NA
WP_022557501.1|408020_408806_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	28.7	2.7e-19
WP_111818031.1|409241_410454_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	48.8	7.9e-66
>prophage 39
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	417316	421575	584965		Cedratvirus(50.0%)	4	NA	NA
WP_022557511.1|417316_418225_+	alpha/beta hydrolase	NA	A0A2R8FCY4	Cedratvirus	29.0	1.5e-05
WP_022557515.1|419376_419703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048903045.1|419820_420414_+	CGNR zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_022557517.1|421161_421575_-	DUF1810 domain-containing protein	NA	A0A2H4UVK5	Bodo_saltans_virus	41.8	7.6e-13
>prophage 40
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	425826	429037	584965		Orpheovirus(50.0%)	2	NA	NA
WP_022557526.1|425826_427494_+	FAD-dependent oxidoreductase	NA	A0A2I2L5E1	Orpheovirus	27.6	9.9e-19
WP_022557528.1|428056_429037_+	alpha/beta hydrolase	NA	A0A286MQ79	Mycobacterium_phage	30.0	7.4e-14
>prophage 41
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	442952	443765	584965		Halovirus(100.0%)	1	NA	NA
WP_022557546.1|442952_443765_-	CbbQ/NirQ/NorQ/GpvN family protein	NA	R4TG24	Halovirus	38.2	4.8e-11
>prophage 42
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	450813	451791	584965		Phage_TP(100.0%)	1	NA	NA
WP_022557556.1|450813_451791_+	U32 family peptidase	NA	Q6DW11	Phage_TP	34.5	1.3e-18
>prophage 43
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	455058	460629	584965		Bacillus_virus(50.0%)	6	NA	NA
WP_048903049.1|455058_455811_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	32.4	3.8e-26
WP_022557562.1|455807_456995_+	NnrS family protein	NA	NA	NA	NA	NA
WP_022557563.1|457176_457362_+	periplasmic nitrate reductase, NapE protein	NA	NA	NA	NA	NA
WP_034499579.1|457369_457870_+	ferredoxin-type protein NapF	NA	NA	NA	NA	NA
WP_003520944.1|457862_458150_+	chaperone NapD	NA	NA	NA	NA	NA
WP_022557565.1|458124_460629_+	periplasmic nitrate reductase subunit alpha	NA	A0A077SK27	Escherichia_phage	22.9	1.3e-09
>prophage 44
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	464576	465353	584965		Sinorhizobium_phage(100.0%)	1	NA	NA
WP_022557577.1|464576_465353_-	SOS response-associated peptidase	NA	A0A291AUP1	Sinorhizobium_phage	39.3	7.3e-41
>prophage 45
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	474887	475877	584965	transposase	Salmonella_phage(100.0%)	1	NA	NA
WP_022557583.1|474887_475877_+|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	37.9	6.4e-50
>prophage 46
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	484764	500735	584965		Yellowstone_lake_phycodnavirus(16.67%)	14	NA	NA
WP_022557591.1|484764_486519_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.7	1.5e-38
WP_022557592.1|486648_487902_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_173402668.1|488094_488856_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	42.1	2.3e-31
WP_022557594.1|488890_489550_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_048903053.1|489618_490305_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_022557596.1|490405_491251_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_022557597.1|491455_492355_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	26.2	5.3e-19
WP_022557599.1|493503_494358_+	transketolase	NA	A0A2K9L6P9	Tupanvirus	32.3	2.9e-30
WP_022557600.1|494354_495329_+	putative transketolase, alpha subunit	NA	NA	NA	NA	NA
WP_022557601.1|495412_496891_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_022557602.1|496908_497943_-	L-idonate 5-dehydrogenase	NA	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	28.0	9.5e-12
WP_022557603.1|498022_498856_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_022557604.1|498852_499923_+	glycerol dehydrogenase	NA	NA	NA	NA	NA
WP_022557605.1|499925_500735_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.1	1.8e-18
>prophage 47
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	510904	512047	584965		Planktothrix_phage(100.0%)	1	NA	NA
WP_048903099.1|510904_512047_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	2.4e-24
>prophage 48
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	525294	530349	584965		Trichoplusia_ni_ascovirus(33.33%)	6	NA	NA
WP_077981974.1|525294_526044_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.4	3.1e-12
WP_022557631.1|526047_526944_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_022557632.1|526940_527840_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_144115389.1|527892_528819_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_022557634.1|528818_529595_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.6	1.9e-12
WP_022557635.1|529587_530349_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.4	1.1e-12
>prophage 49
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	540965	548398	584965	transposase	Pseudomonas_phage(33.33%)	8	NA	NA
WP_111818031.1|540965_542178_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	48.8	7.9e-66
WP_022557646.1|542661_543153_+	DUF4142 domain-containing protein	NA	NA	NA	NA	NA
WP_022557647.1|543454_543886_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_022557648.1|543882_544134_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA	NA
WP_022557651.1|544628_544895_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_022557652.1|545033_545885_-	2-hydroxy-3-oxopropionate reductase	NA	A0A077SLF7	Escherichia_phage	28.3	3.1e-24
WP_006699134.1|545888_546674_-	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
WP_022557653.1|546685_548398_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	1.2e-16
>prophage 50
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	554952	555966	584965		Enterobacteria_phage(100.0%)	1	NA	NA
WP_022557658.1|554952_555966_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	25.9	2.6e-14
>prophage 51
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	559242	561177	584965		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_022557666.1|559242_561177_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.0	1.6e-12
>prophage 52
NC_022536	Rhizobium pusense plasmid IRBL74_p, complete sequence	584965	566467	577024	584965	transposase	Escherichia_phage(16.67%)	10	NA	NA
WP_022557673.1|566467_567181_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	33.5	2.6e-16
WP_084317470.1|568518_568827_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022557677.1|569147_571799_+	DNA ligase D	NA	A0A291AUV6	Sinorhizobium_phage	38.9	1.8e-46
WP_022557679.1|572096_572396_-	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_003585428.1|572464_572941_-	Hsp20 family protein	NA	A0A2L0V0Y9	Agrobacterium_phage	42.5	6.1e-22
WP_006699351.1|573110_574142_-	ATP-dependent DNA ligase	NA	A0A068CDF3	Rhizobium_phage	68.7	6.3e-133
WP_022557681.1|574138_574951_-	Ku protein	NA	NA	NA	NA	NA
WP_022557682.1|574962_575862_-	Ku protein	NA	A0A0A1EPK3	Mycobacterium_phage	27.7	3.0e-14
WP_080823558.1|576062_576239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022557684.1|576247_577024_+	exodeoxyribonuclease III	NA	A0A0N9QXX6	Chrysochromulina_ericina_virus	26.7	9.6e-17
