The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP003181	Granulibacter bethesdensis strain NIH3.1 chromosome, complete genome	2721810	976576	985564	2721810		Acinetobacter_phage(50.0%)	9	NA	NA
WP_025286326.1|976576_977305_-	transcriptional repressor LexA	NA	A0A0N9RTK0	Paenibacillus_phage	37.7	1.9e-06
WP_025286327.1|977409_978612_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_025286328.1|978622_979111_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_095532084.1|979112_980030_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	46.2	5.6e-56
WP_025286330.1|980113_981154_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	37.4	6.8e-58
WP_025286331.1|981162_981777_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.4	1.0e-53
WP_025286332.1|981901_983560_-	glycosyltransferase family protein	NA	D6PFH9	uncultured_phage	24.5	2.1e-08
WP_025286333.1|983556_984018_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
WP_025286334.1|984025_985564_-	anthranilate synthase component I	NA	S4VNU7	Pandoravirus	39.4	1.4e-38
>prophage 2
NZ_CP003181	Granulibacter bethesdensis strain NIH3.1 chromosome, complete genome	2721810	1515203	1574094	2721810	terminase,capsid,integrase,tRNA,portal,head	Acidithiobacillus_phage(20.0%)	58	1545656:1545670	1562266:1562280
WP_025286765.1|1515203_1517846_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.1	2.0e-74
WP_025320499.1|1518370_1518580_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025286766.1|1518703_1519678_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
WP_051496884.1|1519674_1520121_+	TrbC/VirB2 family protein	NA	NA	NA	NA	NA
WP_025286768.1|1520117_1520432_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA	NA
WP_038515528.1|1520446_1522945_+	transporter	NA	NA	NA	NA	NA
WP_072490552.1|1522925_1523687_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA	NA
WP_051496885.1|1523689_1525429_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_025320495.1|1525695_1526388_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_051496993.1|1526492_1527416_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA	NA
WP_025320493.1|1527417_1527885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081371691.1|1528064_1529252_+	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
WP_025286774.1|1529393_1529984_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_025286775.1|1530016_1530580_-	S26 family signal peptidase	NA	NA	NA	NA	NA
WP_011632077.1|1532853_1533141_-	type I-E CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA	NA
WP_011632078.1|1533137_1534085_-	type I-E CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_025286776.1|1534084_1534768_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA	NA
WP_025286777.1|1534769_1535444_-	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA	NA
WP_025286778.1|1535443_1536508_-	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA	NA
WP_025286779.1|1536507_1537011_-	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA	NA
WP_025286780.1|1537007_1538465_-	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA	NA
WP_025286781.1|1538840_1541339_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
WP_081366662.1|1542082_1542526_-	cytidine deaminase	NA	NA	NA	NA	NA
WP_025286782.1|1542545_1543583_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	64.2	4.6e-123
WP_011632087.1|1543937_1544426_+	adenosylmethionine decarboxylase	NA	A0A1D7SEZ2	Cyanophage	40.7	9.6e-15
WP_011632088.1|1544548_1545430_+	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_025286783.1|1545565_1545979_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
1545656:1545670	attL	CAGCCCGATCGGCTC	NA	NA	NA	NA
WP_025286785.1|1546436_1547405_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_125918897.1|1547495_1547738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_125918898.1|1547739_1548612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286788.1|1549320_1549851_+	UPF0262 family protein	NA	NA	NA	NA	NA
WP_011632096.1|1549931_1551020_+	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA	NA
WP_038515531.1|1551019_1551871_+	DUF2272 domain-containing protein	NA	NA	NA	NA	NA
WP_173656025.1|1551914_1552340_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_025286790.1|1552508_1553528_+	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	40.8	1.3e-48
WP_025286791.1|1553608_1554154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286792.1|1554350_1555322_+	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_095532114.1|1555326_1557177_+	single-stranded-DNA-specific exonuclease RecJ	NA	NA	NA	NA	NA
WP_164504159.1|1557383_1557878_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_072632652.1|1558291_1558597_-	excisionase family DNA-binding protein	NA	NA	NA	NA	NA
WP_038515535.1|1558662_1558908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_125918899.1|1558910_1559132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_125918900.1|1559128_1559317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286798.1|1559313_1559709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164504160.1|1559739_1560117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038515540.1|1560370_1561069_-	helix-turn-helix transcriptional regulator	NA	S5FUZ3	Shigella_phage	29.0	9.0e-06
WP_025286799.1|1561633_1562110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286800.1|1562106_1562544_+	hypothetical protein	NA	NA	NA	NA	NA
1562266:1562280	attR	GAGCCGATCGGGCTG	NA	NA	NA	NA
WP_164504161.1|1562530_1563607_+	toprim domain-containing protein	NA	A0A2R3UAP7	Myoviridae_environmental_samples	36.8	7.6e-12
WP_025286802.1|1563599_1565435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072632653.1|1565684_1566365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164504162.1|1566504_1567164_+|terminase	terminase small subunit	terminase	NA	NA	NA	NA
WP_025286805.1|1567156_1569325_+|terminase	phage terminase large subunit family protein	terminase	H6WYG7	Enterobacter_phage	30.0	4.1e-65
WP_025286806.1|1569321_1569546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286807.1|1569552_1571091_+|portal	phage portal protein	portal	K4I1F2	Acidithiobacillus_phage	39.6	1.8e-78
WP_025286808.1|1571087_1572587_+	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	43.6	1.6e-36
WP_025286809.1|1572588_1572951_+|head	head decoration protein	head	NA	NA	NA	NA
WP_025286810.1|1573005_1574094_+|capsid	major capsid protein	capsid	A0A0A8ILA9	Aurantimonas_phage	34.8	5.8e-52
>prophage 3
NZ_CP003181	Granulibacter bethesdensis strain NIH3.1 chromosome, complete genome	2721810	1578783	1588813	2721810		Acinetobacter_phage(33.33%)	9	NA	NA
WP_025286818.1|1578783_1579179_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0D4DCG1	Acinetobacter_phage	43.3	9.5e-21
WP_072632656.1|1579658_1579952_-	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_081371632.1|1580305_1581055_+	phage antirepressor KilAC domain-containing protein	NA	A0A2D1GNK4	Pseudomonas_phage	47.6	2.4e-41
WP_025286821.1|1581054_1581426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286822.1|1581489_1581822_-	type II toxin-antitoxin system HicB family antitoxin	NA	R4JJS9	Burkholderia_phage	52.7	1.0e-28
WP_025286823.1|1581818_1582073_-	type II toxin-antitoxin system HicA family toxin	NA	R4JMD3	Burkholderia_phage	48.8	4.7e-13
WP_025286824.1|1582145_1587116_+	hypothetical protein	NA	A0A173GC04	Salmonella_phage	25.6	6.2e-08
WP_025286825.1|1587186_1587531_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_025286826.1|1588060_1588813_+	phage antirepressor KilAC domain-containing protein	NA	K4IBS6	Acinetobacter_phage	40.8	9.6e-30
>prophage 4
NZ_CP003181	Granulibacter bethesdensis strain NIH3.1 chromosome, complete genome	2721810	1718544	1789588	2721810	tail,plate,tRNA,bacteriocin,protease	Bacillus_phage(20.0%)	53	NA	NA
WP_025286929.1|1718544_1720122_-|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.9	1.0e-20
WP_025286930.1|1720478_1721618_+	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA	NA
WP_072632663.1|1721641_1723180_-	GAF domain-containing protein	NA	Q6XLU9	Feldmannia_irregularis_virus	25.6	4.7e-15
WP_025286932.1|1723384_1725067_-	alginate export family protein	NA	NA	NA	NA	NA
WP_025286934.1|1726251_1728369_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_025286935.1|1728526_1729399_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025286936.1|1729395_1730544_+	TDT family transporter	NA	NA	NA	NA	NA
WP_025286937.1|1730559_1731480_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	32.3	2.4e-14
WP_173656040.1|1731480_1732707_-|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	tRNA	NA	NA	NA	NA
WP_025286939.1|1732781_1733609_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_025286940.1|1733878_1735369_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_125918916.1|1735575_1736856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632205.1|1737074_1737278_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_011632206.1|1737291_1737651_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_025286942.1|1737783_1738854_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	35.6	2.7e-25
WP_025286943.1|1738857_1741317_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_025286944.1|1741485_1743291_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.2	5.1e-21
WP_164504169.1|1743700_1744018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164504170.1|1744682_1744847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286946.1|1744903_1745161_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286947.1|1745351_1746680_+|bacteriocin	NHLP bacteriocin system secretion protein	bacteriocin	NA	NA	NA	NA
WP_025286948.1|1746695_1748906_+|bacteriocin	NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit	bacteriocin	W8CYL7	Bacillus_phage	23.7	5.5e-25
WP_164504171.1|1748988_1751787_+|bacteriocin	NHLP bacteriocin export ABC transporter permease/ATPase subunit	bacteriocin	W8CYL7	Bacillus_phage	27.9	5.2e-28
WP_025286950.1|1752070_1753537_-	UdgX family uracil-DNA binding protein	NA	A0A127AW33	Bacillus_phage	30.6	1.8e-11
WP_025286951.1|1753533_1754766_-	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA	NA
WP_025286952.1|1755074_1756055_+	ADP-glyceromanno-heptose 6-epimerase	NA	M4QHP0	Synechococcus_phage	34.7	7.1e-25
WP_025286953.1|1756109_1758950_+	glycoside hydrolase family 99-like domain-containing protein	NA	NA	NA	NA	NA
WP_025286954.1|1759021_1760602_+	FkbM family methyltransferase	NA	G9E4U7	Ostreococcus_lucimarinus_virus	28.0	6.3e-07
WP_025286955.1|1760670_1761264_-	D-sedoheptulose 7-phosphate isomerase	NA	NA	NA	NA	NA
WP_025286956.1|1761578_1762970_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_072632664.1|1763064_1764900_-	Hint domain-containing protein	NA	NA	NA	NA	NA
WP_025286958.1|1765095_1768068_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_025286959.1|1768436_1768817_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_025286960.1|1768858_1771999_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_025286961.1|1772018_1773326_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_081369690.1|1773398_1774037_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011632247.1|1774087_1775341_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_025286963.1|1775605_1777651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025286964.1|1777752_1778139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286965.1|1778173_1778719_-	hypothetical protein	NA	A0A191ZDK6	Acinetobacter_phage	39.4	5.2e-25
WP_011632251.1|1778751_1779075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286966.1|1779071_1779314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038515565.1|1779298_1780291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038515566.1|1780292_1780772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286969.1|1780783_1782430_-|tail	tail fiber domain-containing protein	tail	A0A0C4K5Y2	Synechococcus_phage	36.9	6.3e-18
WP_025286970.1|1782479_1783799_-	DUF2612 domain-containing protein	NA	A0A291LB27	Pseudomonas_phage	24.3	5.6e-09
WP_025286971.1|1784064_1784667_-	hypothetical protein	NA	A0A291LBI1	Klebsiella_phage	28.4	5.0e-13
WP_164504172.1|1784688_1785714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072632667.1|1785710_1786244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_125918919.1|1786315_1786840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072632668.1|1786836_1787367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095532116.1|1787503_1788028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286974.1|1788124_1789588_-|plate	baseplate J/gp47 family protein	plate	A0A291AYU1	Shigella_phage	27.0	1.6e-41
>prophage 5
NZ_CP003181	Granulibacter bethesdensis strain NIH3.1 chromosome, complete genome	2721810	1798299	1806602	2721810	terminase	Pseudomonas_phage(50.0%)	11	NA	NA
WP_025286985.1|1798299_1798737_-	DUF3277 family protein	NA	A0A0A1IUI2	Pseudomonas_phage	33.6	9.9e-11
WP_025286986.1|1798772_1799849_-	DUF3383 family protein	NA	A0A0N9SJA3	Pseudomonas_phage	48.5	3.3e-68
WP_025286987.1|1799841_1800375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632278.1|1800387_1800753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286988.1|1800749_1801070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025286989.1|1801069_1801462_-	DUF4054 domain-containing protein	NA	NA	NA	NA	NA
WP_011632281.1|1801465_1802416_-	DUF2184 domain-containing protein	NA	L7TMZ5	Rhizobium_phage	46.3	9.2e-70
WP_025286990.1|1802440_1802890_-	DUF2190 family protein	NA	NA	NA	NA	NA
WP_025286991.1|1802892_1803870_-	DUF2213 domain-containing protein	NA	E5AGA6	Erwinia_phage	37.2	1.3e-42
WP_025286992.1|1803897_1805139_-	DUF1073 domain-containing protein	NA	A0A0N9SI81	Pseudomonas_phage	29.5	9.3e-30
WP_081371641.1|1805171_1806602_-|terminase	phage terminase large subunit	terminase	J7I460	Acinetobacter_phage	36.9	6.0e-57
