The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_HG813249	Listeria monocytogenes 6179	3010620	406594	413119	3010620	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|406594_407047_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|407052_407388_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|407604_408033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031669175.1|408044_408461_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	3.8e-20
WP_003733902.1|408738_409128_+	DUF5072 family protein	NA	NA	NA	NA	NA
WP_003721744.1|409140_409653_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|409700_410003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072217178.1|410044_410449_+	phenylalanine racemase	NA	NA	NA	NA	NA
WP_031669176.1|410435_412304_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_031669177.1|412300_413119_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	9.4e-39
>prophage 2
NZ_HG813249	Listeria monocytogenes 6179	3010620	1400310	1407733	3010620		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1400310_1400694_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_015454559.1|1400715_1401699_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	34.6	4.1e-12
WP_014930875.1|1401713_1402727_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	6.0e-11
WP_003721509.1|1402935_1404426_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_015454563.1|1404437_1405262_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.9	3.3e-68
WP_031669482.1|1405274_1405583_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_031669483.1|1405643_1406048_+	PTS lactose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_020246560.1|1406176_1407733_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
>prophage 3
NZ_HG813249	Listeria monocytogenes 6179	3010620	1496866	1600633	3010620	tRNA,tail,terminase,transposase,protease,holin,integrase,portal,capsid	Listeria_phage(79.37%)	112	1504142:1504158	1543291:1543307
WP_003721619.1|1496866_1497919_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.9	1.3e-29
WP_031669510.1|1497918_1500327_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_014600776.1|1500487_1501189_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.4	3.0e-33
WP_015454628.1|1501202_1504613_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
1504142:1504158	attL	TAGTAAAGCAATTTTAA	NA	NA	NA	NA
WP_003721623.1|1504710_1505163_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031669512.1|1505178_1508379_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_015454632.1|1508485_1509160_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	47.3	3.7e-49
WP_072217174.1|1509196_1510123_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_003740576.1|1510276_1510540_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_003723849.1|1510539_1511082_+	CvpA family protein	NA	NA	NA	NA	NA
WP_015454633.1|1511174_1512887_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.8	1.1e-17
WP_015454634.1|1512909_1515267_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.0e-21
WP_003723853.1|1515347_1515659_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	39.6	5.4e-19
WP_003732777.1|1515734_1517546_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003732778.1|1517734_1518949_+	aspartate kinase	NA	NA	NA	NA	NA
WP_003733801.1|1519004_1519499_-	YslB family protein	NA	NA	NA	NA	NA
WP_003723856.1|1519646_1520447_+	glutamate racemase	NA	NA	NA	NA	NA
WP_031669515.1|1520459_1521206_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_012951514.1|1521209_1521821_+	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_015454643.1|1521857_1522382_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_031660124.1|1522667_1523822_-|integrase	site-specific integrase	integrase	A0A059T688	Listeria_phage	94.8	1.1e-207
WP_003730990.1|1523953_1524568_-	hypothetical protein	NA	A0A059T7Z1	Listeria_phage	77.0	7.7e-78
WP_003730991.1|1524618_1525071_-	ImmA/IrrE family metallo-endopeptidase	NA	R4IBK9	Listeria_phage	90.0	4.8e-77
WP_003730992.1|1525087_1525411_-	helix-turn-helix transcriptional regulator	NA	A0A059T6G1	Listeria_phage	71.0	7.2e-35
WP_003730994.1|1525809_1526013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003730995.1|1526079_1526271_+	helix-turn-helix transcriptional regulator	NA	A0A059T5F8	Listeria_phage	87.1	5.4e-22
WP_003730996.1|1526292_1526535_+	hypothetical protein	NA	A8ATD2	Listeria_phage	93.8	3.9e-41
WP_003730997.1|1526537_1526723_+	hypothetical protein	NA	A8ATD3	Listeria_phage	98.4	3.7e-28
WP_012951522.1|1527460_1527703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731843.1|1527988_1528204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031694757.1|1528281_1528857_+	DUF1642 domain-containing protein	NA	B6D7L5	Listeria_phage	41.5	6.4e-26
WP_003731819.1|1528853_1529120_+	hypothetical protein	NA	R4IBL5	Listeria_phage	84.9	1.9e-33
WP_003747322.1|1529116_1529377_+	DUF3850 domain-containing protein	NA	A0A059T7N3	Listeria_phage	65.3	3.1e-20
WP_168169256.1|1529367_1529535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077913499.1|1529590_1529788_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_031669967.1|1530039_1530603_+	DUF1642 domain-containing protein	NA	Q8W5X2	Listeria_phage	42.2	2.4e-33
WP_009912778.1|1530661_1531177_+	hypothetical protein	NA	C9E2P0	Enterococcus_phage	45.5	1.8e-32
WP_102585567.1|1531334_1531826_+	DUF1642 domain-containing protein	NA	R4IBV9	Listeria_phage	69.2	2.6e-28
WP_031669126.1|1531826_1532249_+	hypothetical protein	NA	Q8W5W4	Listeria_phage	95.0	1.5e-69
WP_003731667.1|1532245_1532419_+	hypothetical protein	NA	Q8W5W3	Listeria_phage	100.0	6.8e-24
WP_009911360.1|1532415_1532793_+	hypothetical protein	NA	Q8W5W2	Listeria_phage	66.9	5.1e-40
WP_003731665.1|1532796_1533276_+	siphovirus Gp157 family protein	NA	R4IBM0	Listeria_phage	76.7	7.6e-57
WP_003731664.1|1533295_1533985_+	AAA family ATPase	NA	R4IDY8	Listeria_phage	96.9	1.1e-128
WP_031669966.1|1534048_1535305_+	DEAD/DEAH box helicase	NA	Q8W5V9	Listeria_phage	96.2	2.7e-234
WP_009928019.1|1535329_1535815_+	DUF669 domain-containing protein	NA	A0A059T5G4	Listeria_phage	100.0	2.9e-88
WP_031669965.1|1535837_1538111_+	DNA primase	NA	A0A059T6A4	Listeria_phage	99.9	0.0e+00
WP_031669964.1|1538397_1538712_+	VRR-NUC domain-containing protein	NA	Q8W5V6	Listeria_phage	98.1	1.7e-52
WP_031659886.1|1538824_1539358_+	DUF3310 domain-containing protein	NA	A8ATF5	Listeria_phage	78.9	2.2e-76
WP_009915300.1|1539358_1539514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731655.1|1539575_1539803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009917712.1|1539815_1540241_+	DUF722 domain-containing protein	NA	A0A059T6H4	Listeria_phage	100.0	8.0e-74
WP_031669127.1|1540338_1541082_+	DUF559 domain-containing protein	NA	NA	NA	NA	NA
WP_026749920.1|1541541_1541868_+	hypothetical protein	NA	A0A059T5G5	Listeria_phage	98.1	8.3e-55
WP_009928009.1|1541867_1542182_+	HNH endonuclease	NA	A8ATF8	Listeria_phage	99.0	3.8e-57
WP_025981612.1|1542230_1542587_+|terminase	P27 family phage terminase small subunit	terminase	A8AT94	Listeria_phage	98.0	1.3e-45
WP_031668026.1|1542583_1544227_+|terminase	terminase large subunit	terminase	A8AT95	Listeria_phage	98.2	0.0e+00
1543291:1543307	attR	TAGTAAAGCAATTTTAA	NA	NA	NA	NA
WP_038409761.1|1544238_1545369_+|portal	phage portal protein	portal	A0A059T6F0	Listeria_phage	97.6	2.2e-211
WP_031669962.1|1545365_1546163_+|protease	Clp protease ClpP	protease	A0A059T5F2	Listeria_phage	99.6	1.1e-143
WP_031669961.1|1546189_1547341_+|capsid	phage major capsid protein	capsid	A0A059T678	Listeria_phage	99.7	1.8e-213
WP_167801685.1|1547347_1547518_+	hypothetical protein	NA	A0A059T7Y2	Listeria_phage	98.2	3.1e-21
WP_031669960.1|1547527_1547827_+	hypothetical protein	NA	A0A059T7R0	Listeria_phage	99.0	1.5e-47
WP_014929549.1|1547810_1548176_+	hypothetical protein	NA	A0A059T6F2	Listeria_phage	100.0	2.9e-64
WP_014929550.1|1548172_1548574_+	hypothetical protein	NA	A0A059T5F3	Listeria_phage	97.7	1.8e-67
WP_014929551.1|1548570_1548954_+	hypothetical protein	NA	A0A059T681	Listeria_phage	95.3	2.3e-64
WP_031669959.1|1548974_1549562_+|tail	phage tail protein	tail	A0A059T7Y4	Listeria_phage	99.5	1.2e-107
WP_014929553.1|1549632_1549965_+	hypothetical protein	NA	A0A059T7R2	Listeria_phage	96.4	2.5e-51
WP_009931626.1|1550015_1550177_+	hypothetical protein	NA	A0A059T6F4	Listeria_phage	98.0	4.3e-20
WP_031669958.1|1550180_1555100_+|tail	phage tail tape measure protein	tail	A0A059T5F4	Listeria_phage	96.5	0.0e+00
WP_023553822.1|1555092_1556742_+|tail	phage tail family protein	tail	A0A059T682	Listeria_phage	99.6	0.0e+00
WP_031669134.1|1556754_1559049_+|tail	phage tail protein	tail	A0A059T7Y6	Listeria_phage	98.3	0.0e+00
WP_031694761.1|1559038_1560133_+	hypothetical protein	NA	A0A059T7R4	Listeria_phage	99.5	3.3e-204
WP_003722523.1|1560171_1560537_+	hypothetical protein	NA	Q9T1A0	Listeria_phage	100.0	7.4e-12
WP_003722522.1|1560549_1560831_+|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.4e-41
WP_003733663.1|1560830_1561676_+	M15 family metallopeptidase	NA	A0A059T7Y8	Listeria_phage	94.7	2.7e-137
WP_003722520.1|1561716_1562490_-	DUF3825 domain-containing protein	NA	A8ATW5	Listeria_phage	100.0	9.5e-150
WP_038409764.1|1562763_1563261_-	AP2 domain-containing protein	NA	A8ATW6	Listeria_phage	99.4	1.9e-90
WP_038409766.1|1563285_1563735_-	anti-CRISPR protein AcrIIA1	NA	A8ATW7	Listeria_phage	96.6	1.6e-72
WP_003731276.1|1563735_1563987_-	hypothetical protein	NA	A8ATW8	Listeria_phage	100.0	2.0e-40
WP_003731277.1|1564018_1564252_-	hypothetical protein	NA	A8ATW9	Listeria_phage	100.0	4.3e-13
WP_003723289.1|1564875_1565763_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_031669606.1|1565863_1567345_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_031669607.1|1567392_1568235_-	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_031669608.1|1568732_1571720_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_003723285.1|1571719_1572196_+	DUF1641 domain-containing protein	NA	NA	NA	NA	NA
WP_003723284.1|1572257_1573043_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_012952041.1|1573089_1573767_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	48.0	3.4e-58
WP_003723282.1|1573763_1575143_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	47.1	2.6e-57
WP_003723281.1|1575221_1576310_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003723280.1|1576309_1576978_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.0	5.0e-38
WP_003723279.1|1577046_1577208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723278.1|1577240_1577534_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003733263.1|1577544_1578420_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003733264.1|1578534_1579362_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_015455260.1|1579582_1584175_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_003723624.1|1584300_1585212_+	cation transporter	NA	NA	NA	NA	NA
WP_003723623.1|1585260_1585533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003733266.1|1585629_1586628_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003723621.1|1586630_1587155_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_015455258.1|1587155_1587788_+	nicotinamidase	NA	NA	NA	NA	NA
WP_003723619.1|1587811_1588426_+	SdpI family protein	NA	NA	NA	NA	NA
WP_014601155.1|1588561_1590223_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003729275.1|1590377_1590701_+	YxeA family protein	NA	NA	NA	NA	NA
WP_003723615.1|1590723_1590924_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009924631.1|1591241_1592078_+	lipoyl-[GcvH]:protein N-lipoyltransferase	NA	NA	NA	NA	NA
WP_009924630.1|1592092_1593415_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.2	2.6e-30
WP_003723612.1|1593449_1593635_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003723611.1|1593709_1594363_+|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003723610.1|1594440_1594890_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_003723609.1|1594886_1596557_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003723608.1|1596922_1597459_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_003723607.1|1597826_1599425_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.2	6.5e-153
WP_096832446.1|1599494_1600633_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	69.1	4.1e-48
>prophage 4
NZ_HG813249	Listeria monocytogenes 6179	3010620	1679052	1739750	3010620	tail,terminase,holin,integrase,portal,plate,capsid	Listeria_phage(86.96%)	83	1695594:1695609	1717392:1717407
WP_003722616.1|1679052_1679406_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003722615.1|1679592_1680531_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_003722614.1|1680616_1681450_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_003722613.1|1681493_1682147_+	pyrophosphatase PpaX	NA	NA	NA	NA	NA
WP_009924991.1|1682150_1682648_+	acyltransferase	NA	NA	NA	NA	NA
WP_003732497.1|1682733_1684209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003722610.1|1684287_1685247_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
WP_009924988.1|1685365_1686349_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.2	2.6e-51
WP_020246727.1|1686365_1687427_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_031669377.1|1687468_1689199_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.8	3.9e-175
WP_003722606.1|1689306_1690182_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003722605.1|1690183_1691152_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_003722604.1|1691159_1692131_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722603.1|1692157_1693174_+	NADPH dehydrogenase NamA	NA	NA	NA	NA	NA
WP_003722602.1|1693226_1694393_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA	NA
WP_003722601.1|1694610_1696002_+	amino acid permease	NA	NA	NA	NA	NA
1695594:1695609	attL	CTTGTTATTCGCAATG	NA	NA	NA	NA
WP_003722600.1|1696047_1696644_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.4	6.6e-58
WP_015455208.1|1696800_1698237_+	polysaccharide monooxygenase	NA	A0A2D1GD28	Mycobacterium_phage	29.1	4.4e-07
WP_031669379.1|1698512_1699643_-|integrase	site-specific integrase	integrase	A8ATX2	Listeria_phage	93.4	2.3e-200
WP_031669381.1|1699706_1700414_-	hypothetical protein	NA	A0A0B5CTT6	Listeria_phage	74.0	3.1e-91
WP_031669383.1|1700434_1701157_-	hypothetical protein	NA	A0A059T7P9	Listeria_phage	99.6	8.7e-105
WP_003747290.1|1701172_1701391_-	hypothetical protein	NA	A0A059T6E3	Listeria_phage	81.9	2.4e-26
WP_012582373.1|1701446_1701614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031669386.1|1701769_1702246_-	helix-turn-helix transcriptional regulator	NA	A8ASM2	Listeria_phage	80.3	4.5e-57
WP_012582375.1|1702408_1702642_+	helix-turn-helix transcriptional regulator	NA	A8ASM3	Listeria_phage	95.9	1.6e-31
WP_003770002.1|1702662_1702848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046155079.1|1702807_1703119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003727743.1|1703136_1703403_+	hypothetical protein	NA	A0A059T7Q1	Listeria_phage	100.0	2.5e-41
WP_003727745.1|1703627_1703822_+	hypothetical protein	NA	A0A059T6E5	Listeria_phage	96.9	6.3e-26
WP_003733634.1|1703833_1704070_+	hypothetical protein	NA	A0A059T5E9	Listeria_phage	100.0	3.3e-37
WP_003727747.1|1704066_1704348_+	hypothetical protein	NA	A0A0B5CTX3	Listeria_phage	100.0	1.0e-40
WP_015455157.1|1704349_1704547_-	hypothetical protein	NA	Q9T179	Listeria_phage	100.0	6.2e-21
WP_031644189.1|1704610_1705390_+	phage antirepressor KilAC domain-containing protein	NA	A0A059T6E7	Listeria_phage	96.5	7.6e-139
WP_031669393.1|1705511_1706036_+	hypothetical protein	NA	A8ASM7	Listeria_phage	90.8	8.3e-81
WP_031669394.1|1706041_1706278_+	DUF771 domain-containing protein	NA	A8ATY2	Listeria_phage	88.5	1.9e-37
WP_003733629.1|1706382_1706571_+	hypothetical protein	NA	Q9T175	Listeria_phage	80.6	1.2e-21
WP_031669395.1|1706802_1707762_+	YqaJ viral recombinase family protein	NA	Q9T173	Listeria_phage	83.1	2.8e-151
WP_031644198.1|1707764_1708580_+	recombinase RecT	NA	Q9T172	Listeria_phage	94.8	1.7e-144
WP_031641572.1|1708599_1709523_+	DnaD domain-containing protein	NA	A8ATY7	Listeria_phage	90.6	2.3e-150
WP_014930204.1|1709519_1709687_+	hypothetical protein	NA	A8ASN5	Listeria_phage	80.0	1.6e-17
WP_031669397.1|1709697_1709907_+	hypothetical protein	NA	A8ASN7	Listeria_phage	64.2	1.6e-14
WP_077315975.1|1709962_1710205_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_031669401.1|1710454_1710856_+	hypothetical protein	NA	R4ICD6	Listeria_phage	52.9	1.8e-30
WP_031669403.1|1711409_1711892_+	single-stranded DNA-binding protein	NA	A0A059T5E0	Listeria_phage	71.2	2.0e-57
WP_031669404.1|1711910_1712093_+	hypothetical protein	NA	A8ASP6	Listeria_phage	81.0	2.2e-17
WP_031669406.1|1712037_1712442_+	DUF1064 domain-containing protein	NA	A8ASP7	Listeria_phage	83.6	2.2e-57
WP_031669408.1|1712445_1712829_+	DUF2481 family protein	NA	A8ASP8	Listeria_phage	56.7	2.3e-35
WP_031669409.1|1712992_1713427_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	88.9	3.0e-68
WP_031669411.1|1713687_1714245_+	hypothetical protein	NA	A8ASQ2	Listeria_phage	87.1	1.6e-82
WP_096827923.1|1714333_1714771_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.4	3.3e-14
WP_031669414.1|1714814_1715357_+|terminase	terminase small subunit	terminase	A0A0B5CU16	Listeria_phage	89.8	3.1e-78
WP_031669417.1|1715325_1716657_+|terminase	PBSX family phage terminase large subunit	terminase	A8ASJ2	Listeria_phage	94.1	1.6e-250
WP_031669418.1|1716669_1718160_+|portal	phage portal protein	portal	Q9T1C0	Listeria_phage	98.2	7.2e-279
1717392:1717407	attR	CATTGCGAATAACAAG	NA	NA	NA	NA
WP_031669420.1|1718165_1719305_+|capsid	phage minor capsid protein	capsid	A0A0B5D147	Listeria_phage	95.8	3.2e-202
WP_031669422.1|1719383_1719953_+	phage scaffolding protein	NA	A0A0B5CTV7	Listeria_phage	98.4	3.1e-81
WP_031669424.1|1719976_1720876_+|capsid	phage major capsid protein	capsid	A0A0B5CU19	Listeria_phage	99.7	2.0e-167
WP_072217189.1|1720875_1721034_+	hypothetical protein	NA	A8ASJ7	Listeria_phage	98.1	5.1e-18
WP_031669425.1|1721035_1721431_+	hypothetical protein	NA	A0A0B5D0F6	Listeria_phage	96.2	1.5e-63
WP_031669427.1|1721430_1721793_+	hypothetical protein	NA	A0A059T658	Listeria_phage	95.8	6.0e-62
WP_031669428.1|1721792_1722131_+	hypothetical protein	NA	Q9T1B3	Listeria_phage	99.1	2.9e-58
WP_003727788.1|1722130_1722538_+	hypothetical protein	NA	Q9T1B2	Listeria_phage	98.5	9.0e-67
WP_031669430.1|1722540_1722978_+	hypothetical protein	NA	A0A0B5CYN3	Listeria_phage	98.6	7.2e-78
WP_031669432.1|1722907_1723240_+	Ig domain-containing protein	NA	Q9T1B0	Listeria_phage	97.2	7.7e-48
WP_031669433.1|1723295_1723718_+|tail	phage tail assembly chaperone	tail	Q9T1A9	Listeria_phage	97.1	2.2e-68
WP_003735024.1|1723723_1724323_+	hypothetical protein	NA	A0A0B5CTW0	Listeria_phage	72.0	1.9e-76
WP_031669435.1|1724333_1729718_+	tape measure protein	NA	Q9T1A7	Listeria_phage	89.7	0.0e+00
WP_003722529.1|1729719_1730538_+|tail	phage tail family protein	tail	Q9T1A6	Listeria_phage	91.9	6.8e-146
WP_031669437.1|1730546_1731572_+|tail	phage tail protein	tail	Q9T1A5	Listeria_phage	97.9	8.1e-197
WP_003722527.1|1731572_1732601_+	hypothetical protein	NA	Q9T1A4	Listeria_phage	100.0	4.6e-192
WP_003722526.1|1732600_1733674_+|plate	phage baseplate upper protein	plate	Q9T1A3	Listeria_phage	100.0	4.5e-198
WP_003722525.1|1733685_1734003_+	hypothetical protein	NA	Q9T1A2	Listeria_phage	100.0	6.2e-55
WP_003722524.1|1734007_1734166_+	hypothetical protein	NA	Q9T1A1	Listeria_phage	100.0	6.0e-19
WP_003722523.1|1734193_1734559_+	hypothetical protein	NA	Q9T1A0	Listeria_phage	100.0	7.4e-12
WP_003722522.1|1734571_1734853_+|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.4e-41
WP_033919168.1|1734852_1735698_+	M15 family metallopeptidase	NA	A0A059T7Y8	Listeria_phage	95.8	2.6e-140
WP_010989943.1|1736191_1736743_+	hypothetical protein	NA	A8ASL6	Listeria_phage	95.6	7.4e-96
WP_009926666.1|1736819_1737317_-	AP2 domain-containing protein	NA	A8ATW6	Listeria_phage	97.6	1.8e-88
WP_031669445.1|1737341_1737791_-	anti-CRISPR protein AcrIIA1	NA	A8ATW7	Listeria_phage	99.3	6.9e-76
WP_003722517.1|1737796_1738168_-	anti-CRISPR protein AcrIIA2	NA	A0A059T5F6	Listeria_phage	92.7	5.3e-58
WP_009924649.1|1738196_1738430_-	hypothetical protein	NA	A8ATW9	Listeria_phage	48.1	9.2e-08
WP_009924650.1|1738729_1738963_+	hypothetical protein	NA	A8ATX0	Listeria_phage	100.0	3.3e-37
WP_003731279.1|1738959_1739163_+	hypothetical protein	NA	A8ATX1	Listeria_phage	100.0	2.7e-32
WP_003722598.1|1739414_1739750_-	membrane protein	NA	S5MNN8	Brevibacillus_phage	76.6	6.0e-16
>prophage 5
NZ_HG813249	Listeria monocytogenes 6179	3010620	1841141	1879982	3010620	terminase,holin,tail,integrase	Listeria_phage(94.44%)	60	1828504:1828518	1842647:1842661
1828504:1828518	attL	AAAGATTACGATGAA	NA	NA	NA	NA
WP_003724018.1|1841141_1842305_-|integrase	site-specific integrase	integrase	S5MNZ2	Brevibacillus_phage	31.2	4.4e-50
WP_003724017.1|1842367_1842973_-	hypothetical protein	NA	NA	NA	NA	NA
1842647:1842661	attR	TTCATCGTAATCTTT	NA	NA	NA	NA
WP_003724016.1|1843031_1843739_-	hypothetical protein	NA	A0A0B5CTT6	Listeria_phage	100.0	2.8e-124
WP_003724015.1|1843753_1844179_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0B5CTZ7	Listeria_phage	100.0	2.2e-76
WP_003724014.1|1844194_1844617_-	helix-turn-helix transcriptional regulator	NA	A0A0B5CYL9	Listeria_phage	98.6	7.7e-69
WP_003733688.1|1844782_1844992_+	helix-turn-helix domain-containing protein	NA	A0A0B5D0D3	Listeria_phage	95.6	3.5e-30
WP_003733687.1|1845012_1845207_+	hypothetical protein	NA	A0A059T6E5	Listeria_phage	95.3	1.4e-25
WP_003733686.1|1845218_1845503_+	hypothetical protein	NA	A0A0B5D168	Listeria_phage	85.1	4.5e-41
WP_003722567.1|1845528_1845810_+	hypothetical protein	NA	A8ATX8	Listeria_phage	95.7	1.8e-37
WP_003733684.1|1845811_1846009_-	hypothetical protein	NA	Q9T179	Listeria_phage	96.0	4.0e-20
WP_003733682.1|1846972_1847503_+	hypothetical protein	NA	A0A0B5D173	Listeria_phage	89.6	2.7e-79
WP_003733681.1|1847492_1847699_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003769989.1|1847800_1847989_+	hypothetical protein	NA	A8ATY3	Listeria_phage	95.2	2.5e-27
WP_009930470.1|1848290_1848485_+	hypothetical protein	NA	A0A059T6E8	Listeria_phage	95.3	1.8e-28
WP_003747311.1|1848481_1848958_+	siphovirus Gp157 family protein	NA	A0A059T5F1	Listeria_phage	93.0	7.1e-71
WP_003769987.1|1848962_1849601_+	ERF family protein	NA	A8ASN3	Listeria_phage	74.8	8.0e-78
WP_038409801.1|1849614_1850532_+	DnaD domain-containing protein	NA	A0A0B5D175	Listeria_phage	84.1	3.0e-126
WP_038409803.1|1850528_1851809_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1X9I6Y5	Streptococcus_phage	53.9	1.2e-117
WP_038409805.1|1851805_1852402_+	DUF1642 domain-containing protein	NA	A8ATY9	Listeria_phage	48.5	3.1e-39
WP_038409806.1|1852398_1852767_+	hypothetical protein	NA	A8ASN9	Listeria_phage	95.9	6.5e-64
WP_077913500.1|1852763_1853135_+	hypothetical protein	NA	R4ICD6	Listeria_phage	100.0	1.2e-38
WP_038409807.1|1853138_1853327_+	hypothetical protein	NA	D7RWG4	Brochothrix_phage	47.2	4.4e-08
WP_038409808.1|1853323_1853845_+	hypothetical protein	NA	A8ASP2	Listeria_phage	96.5	1.6e-92
WP_038409811.1|1853841_1854084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038409814.1|1854105_1854315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038409816.1|1854315_1854525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038409818.1|1854505_1854835_+	hypothetical protein	NA	A8ATZ5	Listeria_phage	89.7	2.2e-07
WP_038409820.1|1854827_1855016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038409823.1|1855012_1855414_+	hypothetical protein	NA	A8ATZ6	Listeria_phage	92.5	6.0e-63
WP_038409826.1|1855413_1855896_+	single-stranded DNA-binding protein	NA	A8ASP5	Listeria_phage	69.4	7.2e-55
WP_038409828.1|1855914_1856097_+	hypothetical protein	NA	A8ASP6	Listeria_phage	79.4	3.8e-17
WP_038409830.1|1856041_1856446_+	DUF1064 domain-containing protein	NA	A8ASP7	Listeria_phage	84.3	3.8e-57
WP_031645285.1|1856449_1856842_+	DUF2481 family protein	NA	A8ASP8	Listeria_phage	45.0	8.0e-20
WP_003722548.1|1856860_1857016_+	hypothetical protein	NA	A0A0B5D186	Listeria_phage	96.1	3.3e-22
WP_038409832.1|1857103_1857676_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0B5D145	Listeria_phage	87.9	2.8e-90
WP_031670269.1|1857833_1858466_+	hypothetical protein	NA	A8AU05	Listeria_phage	99.0	4.0e-114
WP_012951944.1|1858547_1858775_+	hypothetical protein	NA	A8AU06	Listeria_phage	100.0	1.5e-34
WP_031641733.1|1858814_1859600_+	hypothetical protein	NA	A0A0B5CTX0	Listeria_phage	95.9	8.0e-128
WP_038409838.1|1859538_1860858_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0B5CYJ6	Listeria_phage	87.8	1.7e-231
WP_023548504.1|1860872_1862429_+	hypothetical protein	NA	A0A0B5D0A6	Listeria_phage	98.3	1.9e-298
WP_023548506.1|1862433_1863477_+	hypothetical protein	NA	A0A0B5D111	Listeria_phage	97.7	3.7e-197
WP_003723788.1|1863572_1864127_+	hypothetical protein	NA	A8ATU9	Listeria_phage	98.9	8.8e-89
WP_003723787.1|1864149_1865022_+	hypothetical protein	NA	A0A0B5CTX8	Listeria_phage	93.8	2.3e-152
WP_003723786.1|1865035_1865191_+	hypothetical protein	NA	A0A0B5CYK6	Listeria_phage	98.0	1.0e-18
WP_003723785.1|1865191_1865545_+	hypothetical protein	NA	A8ATV2	Listeria_phage	99.1	8.4e-61
WP_003733695.1|1865544_1865910_+	hypothetical protein	NA	A8ATV3	Listeria_phage	99.2	9.9e-65
WP_003733696.1|1865899_1866217_+	HK97 gp10 family phage protein	NA	A8ATV4	Listeria_phage	96.2	4.6e-50
WP_003725064.1|1866213_1866585_+	hypothetical protein	NA	A8ATV5	Listeria_phage	100.0	8.5e-64
WP_003733697.1|1866589_1867279_+	Ig domain-containing protein	NA	A8ATV6	Listeria_phage	85.6	2.8e-100
WP_038409856.1|1867334_1867766_+	hypothetical protein	NA	A8ATV7	Listeria_phage	97.9	2.6e-72
WP_038409859.1|1867798_1868074_+	hypothetical protein	NA	A0A0B5D116	Listeria_phage	98.9	8.0e-43
WP_038409862.1|1868078_1872878_+|tail	phage tail tape measure protein	tail	A8ATV9	Listeria_phage	85.9	0.0e+00
WP_023552439.1|1872874_1874443_+|tail	phage tail family protein	tail	A8ATW0	Listeria_phage	99.2	1.5e-303
WP_038409865.1|1874455_1876618_+|tail	phage tail protein	tail	A8ATW1	Listeria_phage	96.4	0.0e+00
WP_038409867.1|1876669_1876975_+	hypothetical protein	NA	A0A059T5E6	Listeria_phage	99.0	4.0e-43
WP_038409869.1|1876974_1877235_+|holin	phage holin	holin	A0A059T684	Listeria_phage	83.0	2.2e-34
WP_038409871.1|1877234_1878038_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A059T7X1	Listeria_phage	81.1	7.5e-81
WP_038409916.1|1878078_1878852_-	DUF3825 domain-containing protein	NA	A8ATW5	Listeria_phage	99.6	2.1e-149
WP_012951561.1|1879125_1879308_-	hypothetical protein	NA	A0A059T7Z0	Listeria_phage	96.6	2.3e-22
WP_012951563.1|1879748_1879982_+	hypothetical protein	NA	A8ATC5	Listeria_phage	98.7	1.6e-36
>prophage 6
NZ_HG813249	Listeria monocytogenes 6179	3010620	1899109	1944379	3010620	protease,tRNA,transposase	Bacillus_virus(23.08%)	41	NA	NA
WP_003723562.1|1899109_1900249_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1900329_1900725_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1900875_1901091_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003732794.1|1901208_1901742_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1901759_1902425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732796.1|1902686_1903625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1903739_1905023_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1905208_1906468_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003723887.1|1906586_1907153_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003723888.1|1907187_1907757_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1907858_1908401_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1908410_1909274_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003723891.1|1909270_1910056_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723892.1|1910189_1911050_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003732799.1|1911320_1913399_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	3.2e-107
WP_015454658.1|1913461_1914766_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003724000.1|1915048_1915951_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1915971_1916511_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003732800.1|1916524_1917934_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	28.7	3.7e-43
WP_003726695.1|1917954_1918734_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003724129.1|1918836_1919256_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1919277_1919589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724131.1|1919591_1920464_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003724132.1|1920505_1921102_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1921259_1921667_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1921847_1923815_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_003723732.1|1923811_1926271_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
WP_003723733.1|1926353_1926821_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_031668943.1|1927150_1928920_+	lmo1289 family class 1 internalin	NA	NA	NA	NA	NA
WP_031668945.1|1929251_1931054_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003723736.1|1931087_1932956_-	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_003723737.1|1933168_1933867_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	1.3e-12
WP_003723738.1|1934099_1935776_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_012951578.1|1935901_1936819_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1936941_1937175_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_003733804.1|1937285_1938509_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010989728.1|1938501_1939728_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1939930_1940299_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1940369_1941704_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003723436.1|1941847_1943143_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	61.6	1.8e-145
WP_096933313.1|1943241_1944379_+|transposase	IS3-like element ISLmo1 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	69.1	5.3e-48
>prophage 7
NZ_HG813249	Listeria monocytogenes 6179	3010620	2454180	2462466	3010620		Synechococcus_phage(33.33%)	8	NA	NA
WP_003722243.1|2454180_2454747_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	7.0e-25
WP_003733242.1|2454743_2455793_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.5	4.6e-62
WP_003722245.1|2455811_2457239_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_031669014.1|2457223_2459443_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.4	1.5e-160
WP_003722247.1|2459435_2460119_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_015454911.1|2460122_2460368_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014931516.1|2460379_2461093_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	37.8	8.8e-41
WP_003733238.1|2461173_2462466_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	7.2e-17
>prophage 1
NZ_HG813250	Listeria monocytogenes 6179 plasmid LM6179, complete sequence	62206	42353	51343	62206	protease	Cronobacter_phage(16.67%)	10	NA	NA
WP_003728507.1|42353_44468_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.1	3.4e-117
WP_003728509.1|44895_45132_-	helix-turn-helix transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	53.4	6.7e-14
WP_003731679.1|45094_45373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003728510.1|45492_45720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003728511.1|45709_46318_-	recombinase family protein	NA	A0A1W5LU24	Ralstonia_phage	42.9	1.0e-21
WP_096832442.1|46531_48709_-	ATP-binding protein	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	25.0	1.2e-19
WP_031669356.1|49311_49800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003769263.1|49958_50336_-	DUF3850 domain-containing protein	NA	C9E2N9	Enterococcus_phage	55.1	2.2e-14
WP_003731676.1|50354_51017_-	DUF2786 domain-containing protein	NA	NA	NA	NA	NA
WP_031641563.1|51016_51343_-	hypothetical protein	NA	A0A2K9V3N4	Faecalibacterium_phage	40.8	3.2e-06
