The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP004372	Roseibacterium elongatum DSM 19469, complete genome	3555109	235012	243623	3555109	transposase,tRNA	uncultured_Mediterranean_phage(50.0%)	10	NA	NA
WP_025310635.1|235012_235918_+	FAD-dependent thymidylate synthase	NA	M4QT16	Loktanella_phage	64.2	5.4e-104
WP_084613585.1|235929_236727_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_156945673.1|236831_236996_+	DUF2177 family protein	NA	NA	NA	NA	NA
WP_156945632.1|237047_238147_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.8	1.2e-44
WP_025310636.1|238186_238465_+	DUF2177 family protein	NA	NA	NA	NA	NA
WP_025310637.1|238626_239919_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.2	1.0e-92
WP_025310638.1|239977_240670_+	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_025310639.1|240935_241724_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	36.4	3.7e-32
WP_025310640.1|241720_242359_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	44.8	2.9e-27
WP_025310641.1|242504_243623_+	peptidoglycan DD-metalloendopeptidase family protein	NA	G9FHH0	Rhodococcus_phage	34.2	3.8e-06
>prophage 2
NZ_CP004372	Roseibacterium elongatum DSM 19469, complete genome	3555109	2319842	2325565	3555109	capsid,protease,head,tail,portal	Geobacillus_phage(33.33%)	10	NA	NA
WP_025312494.1|2319842_2321006_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	37.0	4.0e-59
WP_025312495.1|2321002_2321251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025312496.1|2321260_2321821_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	49.4	2.6e-32
WP_025312497.1|2321846_2323016_+|capsid	phage major capsid protein	capsid	B0VK33	Azospirillum_phage	41.0	3.5e-63
WP_025312498.1|2323240_2323828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025312499.1|2323824_2324154_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_025312500.1|2324150_2324555_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_025312501.1|2324601_2325015_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_025312502.1|2325026_2325341_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_025312503.1|2325337_2325565_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
>prophage 3
NZ_CP004372	Roseibacterium elongatum DSM 19469, complete genome	3555109	3335232	3401460	3555109	transposase,integrase,tRNA	Leptospira_phage(20.0%)	52	3340219:3340236	3408622:3408639
WP_025313344.1|3335232_3336966_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_025313345.1|3337043_3337400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313346.1|3337396_3337837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313347.1|3337864_3339769_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_025313348.1|3339957_3340305_-	hypothetical protein	NA	NA	NA	NA	NA
3340219:3340236	attL	GGTGCCATCGAACCCGTC	NA	NA	NA	NA
WP_025313349.1|3340364_3341543_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
WP_025313350.1|3341685_3342012_+	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	45.9	8.1e-18
WP_025313351.1|3342091_3342493_+	STAS/SEC14 domain-containing protein	NA	NA	NA	NA	NA
WP_025313352.1|3342565_3343348_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_025313354.1|3344704_3346027_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_025313355.1|3346106_3346988_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_025313356.1|3346987_3347836_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_025313357.1|3347839_3348892_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.1	3.2e-23
WP_025313358.1|3349043_3349703_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_156945632.1|3349892_3350992_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.8	1.2e-44
WP_025313359.1|3351412_3351976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313360.1|3351968_3352238_-	hypothetical protein	NA	J9Q735	Salmonella_phage	36.2	1.7e-05
WP_025313361.1|3352344_3353292_-|integrase	site-specific integrase	integrase	A0A0A8WIE1	Clostridium_phage	26.1	8.4e-23
WP_156945965.1|3353541_3354114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156945966.1|3355131_3357180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313364.1|3357226_3357943_-	LrgB family protein	NA	NA	NA	NA	NA
WP_025313365.1|3357939_3358293_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_025313366.1|3358429_3358969_+	YecA family protein	NA	NA	NA	NA	NA
WP_025313367.1|3359137_3359542_+	helix-turn-helix transcriptional regulator	NA	L7TM24	Rhizobium_phage	41.9	5.3e-19
WP_025313368.1|3359877_3360948_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_156945967.1|3362782_3363322_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156945968.1|3363427_3363805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313369.1|3364235_3365210_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_025313370.1|3365361_3366495_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_025313371.1|3366491_3369092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025313372.1|3369088_3372403_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_038650524.1|3372399_3373056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051508436.1|3373292_3374777_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_025313375.1|3374773_3377521_+	Z1 domain-containing protein	NA	NA	NA	NA	NA
WP_025313376.1|3377510_3378470_+	PD-(D/E)XK motif protein	NA	NA	NA	NA	NA
WP_025313377.1|3378462_3380568_+	AIPR family protein	NA	NA	NA	NA	NA
WP_025313378.1|3380569_3382063_-	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	26.4	2.8e-20
WP_084613840.1|3382150_3382672_+	DNA mismatch endonuclease Vsr	NA	E5E3X5	Burkholderia_phage	54.2	5.4e-32
WP_025313379.1|3382972_3383896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025313380.1|3384041_3386564_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_025313381.1|3386556_3386844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084613841.1|3387468_3388842_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	25.3	3.2e-07
WP_025313383.1|3389033_3389840_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_038650531.1|3389836_3390445_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_025313385.1|3390441_3390888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313386.1|3391107_3392493_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_025313387.1|3392744_3394625_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_025313388.1|3394611_3396432_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_156945969.1|3396965_3398336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025313390.1|3398332_3399442_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_156945970.1|3400010_3400298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156945632.1|3400361_3401460_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.8	1.2e-44
3408622:3408639	attR	GACGGGTTCGATGGCACC	NA	NA	NA	NA
