assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000600145.1_ASM60014v1	NZ_CP006823	Helicobacter pylori oki154 chromosome, complete genome	1	126280-126366	1	CRISPRCasFinder	no		cas14j,cas3,DEDDh	Orphan	CCCACTCTTGTTTGTCTTTTGTTT	24	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,DEDDh	NA|193aa|up_9|NZ_CP006823.1_113579_114158_+,NA|99aa|up_4|NZ_CP006823.1_118474_118771_+,NA|290aa|down_7|NZ_CP006823.1_134997_135867_+	NA|193aa|up_9|NZ_CP006823.1_113579_114158_+	NA	NA|621aa|up_8|NZ_CP006823.1_114296_116159_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|192aa|up_7|NZ_CP006823.1_116189_116765_-	PRK14149, PRK14149, heat shock protein GrpE; Provisional	NA|277aa|up_6|NZ_CP006823.1_116764_117595_-	PRK03911, PRK03911, HrcA family transcriptional regulator	NA|213aa|up_5|NZ_CP006823.1_117815_118454_+	PRK05834, PRK05834, hypothetical protein; Provisional	NA|99aa|up_4|NZ_CP006823.1_118474_118771_+	NA	NA|628aa|up_3|NZ_CP006823.1_118782_120666_-	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown]	NA|515aa|up_2|NZ_CP006823.1_120728_122273_-	PRK13588, PRK13588, flagellin B; Provisional	NA|737aa|up_1|NZ_CP006823.1_122437_124648_+	PRK05582, PRK05582, type I DNA topoisomerase	NA|309aa|up_0|NZ_CP006823.1_124640_125567_+	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion]	NA|813aa|down_0|NZ_CP006823.1_126884_129323_-	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|613aa|down_1|NZ_CP006823.1_129676_131515_+	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|204aa|down_2|NZ_CP006823.1_131511_132123_+	TIGR00168, Translation_initiation_factor_IF-3, translation initiation factor IF-3	NA|65aa|down_3|NZ_CP006823.1_132103_132298_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|117aa|down_4|NZ_CP006823.1_132394_132745_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|287aa|down_5|NZ_CP006823.1_132944_133805_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|144aa|down_6|NZ_CP006823.1_134159_134591_+	pfam06518, DUF1104, Protein of unknown function (DUF1104)	NA|290aa|down_7|NZ_CP006823.1_134997_135867_+	NA	NA|414aa|down_8|NZ_CP006823.1_137849_139091_-	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|450aa|down_9|NZ_CP006823.1_139271_140621_+	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family
GCF_000600145.1_ASM60014v1	NZ_CP006823	Helicobacter pylori oki154 chromosome, complete genome	2	377586-377660	2	CRISPRCasFinder	no		cas14j,cas3,DEDDh	Orphan	TACTTTTATATCACATTACTTTT	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,DEDDh	NA|208aa|up_6|NZ_CP006823.1_370799_371423_+,NA|94aa|up_0|NZ_CP006823.1_377212_377494_+,NA|136aa|down_7|NZ_CP006823.1_385352_385760_-,NA|81aa|down_8|NZ_CP006823.1_385762_386005_-	NA|308aa|up_9|NZ_CP006823.1_366399_367323_+	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|480aa|up_8|NZ_CP006823.1_367619_369059_+	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|552aa|up_7|NZ_CP006823.1_369150_370806_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|208aa|up_6|NZ_CP006823.1_370799_371423_+	NA	NA|190aa|up_5|NZ_CP006823.1_371426_371996_+	COG1787, COG1787, Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes [Defense mechanisms]	NA|384aa|up_4|NZ_CP006823.1_372105_373257_+	COG1106, COG1106, Predicted ATPases [General function prediction only]	NA|332aa|up_3|NZ_CP006823.1_374039_375035_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|172aa|up_2|NZ_CP006823.1_375038_375554_-	pfam16522, FliS_cochap, Flagellar FLiS export co-chaperone, HP1076	NA|437aa|up_1|NZ_CP006823.1_375687_376998_+	pfam17033, Peptidase_M99, Carboxypeptidase controlling helical cell shape catalytic	NA|94aa|up_0|NZ_CP006823.1_377212_377494_+	NA	NA|67aa|down_0|NZ_CP006823.1_377679_377880_-	TIGR00003, COP-associated_protein, copper ion binding protein	NA|742aa|down_1|NZ_CP006823.1_377880_380106_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|238aa|down_2|NZ_CP006823.1_380102_380816_-	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|633aa|down_3|NZ_CP006823.1_381057_382956_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|326aa|down_4|NZ_CP006823.1_382964_383942_-	TIGR00406, Ribosomal_protein_L11_methyltransferase, ribosomal protein L11 methyltransferase	NA|125aa|down_5|NZ_CP006823.1_383954_384329_-	cd19923, REC_CheY_CheY3, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY3 and similar CheY family proteins	NA|201aa|down_6|NZ_CP006823.1_384618_385221_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|136aa|down_7|NZ_CP006823.1_385352_385760_-	NA	NA|81aa|down_8|NZ_CP006823.1_385762_386005_-	NA	NA|179aa|down_9|NZ_CP006823.1_385998_386535_-	pfam02527, GidB, rRNA small subunit methyltransferase G
GCF_000600145.1_ASM60014v1	NZ_CP006823	Helicobacter pylori oki154 chromosome, complete genome	3	500134-500231	3	CRISPRCasFinder	no		cas14j,cas3,DEDDh	Orphan	TGCCACTTGTTCCACTCGCACTA	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,DEDDh	NA|126aa|up_9|NZ_CP006823.1_479804_480182_+,NA|191aa|up_8|NZ_CP006823.1_480159_480732_+,NA|156aa|up_6|NZ_CP006823.1_481623_482091_-,NA|75aa|up_5|NZ_CP006823.1_484214_484439_-,NA|85aa|up_4|NZ_CP006823.1_484431_484686_-,NA|173aa|up_2|NZ_CP006823.1_495706_496225_-,NA|99aa|up_0|NZ_CP006823.1_497170_497467_-,NA|45aa|down_2|NZ_CP006823.1_504596_504731_-,NA|79aa|down_4|NZ_CP006823.1_507309_507546_-,NA|88aa|down_5|NZ_CP006823.1_507556_507820_-,NA|160aa|down_7|NZ_CP006823.1_508111_508591_-,NA|275aa|down_8|NZ_CP006823.1_508694_509519_-,NA|99aa|down_9|NZ_CP006823.1_510300_510597_+	NA|126aa|up_9|NZ_CP006823.1_479804_480182_+	NA	NA|191aa|up_8|NZ_CP006823.1_480159_480732_+	NA	NA|267aa|up_7|NZ_CP006823.1_480853_481654_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|156aa|up_6|NZ_CP006823.1_481623_482091_-	NA	NA|75aa|up_5|NZ_CP006823.1_484214_484439_-	NA	NA|85aa|up_4|NZ_CP006823.1_484431_484686_-	NA	NA|2869aa|up_3|NZ_CP006823.1_484821_493428_-	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair]	NA|173aa|up_2|NZ_CP006823.1_495706_496225_-	NA	NA|315aa|up_1|NZ_CP006823.1_496221_497166_-	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11	NA|99aa|up_0|NZ_CP006823.1_497170_497467_-	NA	NA|401aa|down_0|NZ_CP006823.1_500624_501827_-	COG2948, VirB10, Type IV secretory pathway, VirB10 components [Intracellular trafficking and secretion]	NA|556aa|down_1|NZ_CP006823.1_501823_503491_-	cd06911, VirB9_CagX_TrbG, VirB9/CagX/TrbG, a component of the type IV secretion system	NA|45aa|down_2|NZ_CP006823.1_504596_504731_-	NA	NA|861aa|down_3|NZ_CP006823.1_504727_507310_-	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|79aa|down_4|NZ_CP006823.1_507309_507546_-	NA	NA|88aa|down_5|NZ_CP006823.1_507556_507820_-	NA	NA|95aa|down_6|NZ_CP006823.1_507830_508115_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|160aa|down_7|NZ_CP006823.1_508111_508591_-	NA	NA|275aa|down_8|NZ_CP006823.1_508694_509519_-	NA	NA|99aa|down_9|NZ_CP006823.1_510300_510597_+	NA
