The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP005933	Mycoplasma bovis CQ-W70 chromosome, complete genome	948516	75170	86531	948516	tRNA	Bodo_saltans_virus(28.57%)	8	NA	NA
WP_013954527.1|75170_76151_+	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	27.1	3.9e-15
WP_013954528.1|76154_76976_+	alpha/beta hydrolase	NA	G9E3U1	Emiliania_huxleyi_virus	32.5	2.3e-08
WP_013954529.1|77059_77824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013954530.1|77816_78797_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	40.6	8.1e-53
WP_013954531.1|78921_83298_+	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	31.8	6.2e-12
WP_013954532.1|83703_84927_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	35.1	1.5e-61
WP_013456569.1|84916_85882_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	40.9	3.6e-29
WP_013954533.1|85871_86531_+	uracil-DNA glycosylase	NA	A0A068EP41	Falconid_herpesvirus	36.4	1.6e-28
>prophage 2
NZ_CP005933	Mycoplasma bovis CQ-W70 chromosome, complete genome	948516	312467	400401	948516	transposase,tRNA	Tupanvirus(16.67%)	57	NA	NA
WP_038582687.1|312467_313712_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	27.0	5.3e-09
WP_013456216.1|314153_315503_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	1.0e-13
WP_013954692.1|315495_317106_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_013954693.1|317171_318611_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_013954694.1|318722_320810_-	peptidase S41	NA	NA	NA	NA	NA
WP_013954695.1|320773_322165_-	leucine-rich repeat protein	NA	NA	NA	NA	NA
WP_013954696.1|322167_324477_-	leucine-rich repeat protein	NA	NA	NA	NA	NA
WP_013954697.1|324795_326157_-	variable surface lipoprotein	NA	NA	NA	NA	NA
WP_013954698.1|326676_327510_+	DNA adenine methylase	NA	A0A1S5PRR3	Streptococcus_phage	45.7	3.6e-54
WP_013954699.1|327816_328770_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_013954700.1|328819_329716_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_038582690.1|329749_331624_-	peptidase S41	NA	NA	NA	NA	NA
WP_013954702.1|331647_332151_-	dUTP diphosphatase	NA	S6AVW3	Thermus_phage	32.8	5.6e-10
WP_078086168.1|332453_334055_-|transposase	IS1634-like element ISMbov3 family transposase	transposase	NA	NA	NA	NA
WP_013954704.1|334441_335806_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013954705.1|335916_336702_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_013954706.1|336706_338236_-	RNA polymerase sigma factor	NA	G8CLC7	Synechococcus_phage	33.7	2.0e-29
WP_013954707.1|338228_340169_-	DNA primase	NA	A0A1S5RFD7	Helicobacter_phage	35.3	5.7e-42
WP_013954708.1|340210_341587_-|tRNA	glycine--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	32.0	3.9e-53
WP_013954709.1|341698_343486_-	membrane protein	NA	NA	NA	NA	NA
WP_013954710.1|343936_345292_+	alkylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013456298.1|345294_346227_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	30.0	1.3e-07
WP_013456124.1|346190_347942_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_013456114.1|348048_348294_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_013456030.1|348374_350888_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_038582866.1|351130_352177_+	zinc-dependent alcohol dehydrogenase family protein	NA	A0A0K0KVL7	Prochlorococcus_phage	26.9	1.0e-13
WP_075271040.1|352325_354176_-	type I DNA topoisomerase	NA	A0A2P1ELA0	Moumouvirus	32.2	3.7e-75
WP_013456432.1|354543_354981_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_013456362.1|355022_355421_+	single-stranded DNA-binding protein	NA	A0A0H3U4B5	Staphylococcus_phage	30.3	9.3e-08
WP_013456088.1|355440_355767_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_078086165.1|357467_358496_-|transposase	IS30-like element ISMbov1 family transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	33.3	6.5e-21
WP_013456295.1|358839_359295_-	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA	NA
WP_013954715.1|359345_361016_-	APC family permease	NA	NA	NA	NA	NA
WP_013954716.1|361254_362571_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L0H9	Tupanvirus	25.1	2.7e-11
WP_013456122.1|362639_364343_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	23.1	2.0e-14
WP_013456084.1|365768_366560_-	aquaporin family protein	NA	M1HQW3	Paramecium_bursaria_Chlorella_virus	27.5	7.3e-12
WP_013954718.1|366568_368077_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_013456345.1|368366_369758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038582872.1|369890_370877_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_013456401.1|370893_371862_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_013456470.1|371975_372719_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_013456409.1|372898_373183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013456558.1|373175_374822_+	DAK2 domain-containing protein	NA	NA	NA	NA	NA
WP_013456463.1|374828_375833_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_013456004.1|375825_376500_+	ribonuclease III	NA	M4QMG4	Micromonas_pusilla_virus	31.9	1.2e-18
WP_013954720.1|376573_379552_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_013954721.1|379604_380957_-	YitT family protein	NA	NA	NA	NA	NA
WP_013954722.1|381051_381888_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_013954723.1|381874_382606_-	DNA-processing protein DprA	NA	NA	NA	NA	NA
WP_038582875.1|382832_383873_+	zinc-dependent alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	29.7	5.2e-34
WP_038582700.1|384198_385227_+	variable surface lipoprotein	NA	NA	NA	NA	NA
WP_013954726.1|385491_388293_-	C1 family peptidase	NA	NA	NA	NA	NA
WP_013954727.1|388521_395553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_186003270.1|396265_397126_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_186003268.1|397221_397653_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_038582704.1|398125_399034_+	variable surface lipoprotein	NA	NA	NA	NA	NA
WP_078086165.1|399372_400401_-|transposase	IS30-like element ISMbov1 family transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	33.3	6.5e-21
>prophage 3
NZ_CP005933	Mycoplasma bovis CQ-W70 chromosome, complete genome	948516	887595	930192	948516	transposase,integrase,tRNA	Staphylococcus_phage(25.0%)	39	917475:917492	927508:927525
WP_078086165.1|887595_888624_+|transposase	IS30-like element ISMbov1 family transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	33.3	6.5e-21
WP_013955061.1|888834_889842_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_013456123.1|890616_891366_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_013955063.1|891764_893609_+	ribonuclease J	NA	NA	NA	NA	NA
WP_013955064.1|893743_894895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014829996.1|895084_897502_+	DUF2779 domain-containing protein	NA	NA	NA	NA	NA
WP_013955066.1|897519_897828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013955067.1|898125_899547_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_013955068.1|899539_900853_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_013955069.1|900852_901158_-|tRNA	glutamyl-tRNA(Gln) amidotransferase	tRNA	NA	NA	NA	NA
WP_013955070.1|901163_902018_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_013456616.1|902029_902608_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	29.7	1.2e-11
WP_013955071.1|902597_903359_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_013456430.1|903351_904092_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_013456524.1|904101_904416_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_013456382.1|904589_905900_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_013456261.1|905902_906568_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_014829997.1|906638_907100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013955073.1|907387_908521_-	DnaJ domain-containing protein	NA	A0A1V0SBY2	Catovirus	32.2	3.0e-27
WP_013955074.1|908758_909100_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_013955075.1|909273_910509_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	33.2	3.3e-59
WP_013955076.1|910519_911122_-|tRNA	tRNA-binding protein	tRNA	NA	NA	NA	NA
WP_013456246.1|911183_912086_+	DegV family protein	NA	NA	NA	NA	NA
WP_014829999.1|912246_912480_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_013955078.1|912519_913242_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_013456073.1|913241_914318_-	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_013955080.1|914443_915016_-	Fic family protein	NA	NA	NA	NA	NA
WP_013955081.1|915037_916459_-	YitT family protein	NA	NA	NA	NA	NA
917475:917492	attL	TGATAATAGAAGTGAAAA	NA	NA	NA	NA
WP_038582830.1|917913_919302_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013955084.1|919616_921584_+	type IIA DNA topoisomerase subunit B	NA	G3M9Z3	Bacillus_virus	41.5	8.7e-131
WP_013955085.1|921706_922021_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	39.0	1.7e-12
WP_013955086.1|922073_922520_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	37.4	1.8e-12
WP_013955087.1|922639_923707_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_078086167.1|923861_925463_+|transposase	IS1634-like element ISMbov3 family transposase	transposase	NA	NA	NA	NA
WP_013955090.1|925767_926757_-	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_038582834.1|926872_927082_-	variable surface lipoprotein	NA	NA	NA	NA	NA
WP_013456532.1|927218_928178_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
927508:927525	attR	TTTTCACTTCTATTATCA	NA	NA	NA	NA
WP_013955092.1|928373_928769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013955093.1|928947_930192_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	27.3	1.1e-09
