assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	1	365075-365773	1	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	365363-365404|365438-365470	NZ_CP007809.1_373379-373420|NZ_CP007809.1_372194-372226	NA	10	10	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP007809.1_362087_362390_+,NA|161aa|down_1|NZ_CP007809.1_375168_375651_-,NA|410aa|down_5|NZ_CP007809.1_377767_378997_+	NA|262aa|up_9|NZ_CP007809.1_356782_357568_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP007809.1_357556_358360_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP007809.1_358369_359767_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP007809.1_359945_361721_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP007809.1_361863_362091_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP007809.1_362087_362390_+	NA	NA|74aa|up_3|NZ_CP007809.1_362437_362659_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP007809.1_362655_363081_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP007809.1_363216_363849_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP007809.1_363845_364754_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP007809.1_374509_375181_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP007809.1_375168_375651_-	NA	NA|239aa|down_2|NZ_CP007809.1_375708_376425_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP007809.1_376526_377183_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP007809.1_377252_377744_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP007809.1_377767_378997_+	NA	NA|621aa|down_6|NZ_CP007809.1_379151_381014_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP007809.1_381085_381472_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NZ_CP007809.1_381474_382110_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP007809.1_382197_383082_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	2	687956-688032	2	CRISPRCasFinder	no	c2c9_V-U4	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP007809.1_673851_674259_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP007809.1_674318_675005_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP007809.1_675158_677792_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP007809.1_677814_680202_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP007809.1_680339_681062_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP007809.1_681058_681856_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP007809.1_681857_682745_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP007809.1_682750_683965_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|344aa|up_1|NZ_CP007809.1_683961_684993_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|482aa|up_0|NZ_CP007809.1_684989_686435_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP007809.1_689167_690718_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP007809.1_690769_691162_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP007809.1_691158_691416_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP007809.1_691598_692834_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP007809.1_693084_693498_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP007809.1_693494_693731_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP007809.1_693834_694341_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP007809.1_694454_694925_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP007809.1_694968_695730_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP007809.1_695786_696098_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	3	918552-919457	1	CRT	no	csa3	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGNGCCGGNGGNNCCGGCGG	21	1	2	919293-919328|919293-919328	NZ_CP007809.1_670470-670435|NZ_CP007809.1_1205829-1205864	NA	18	18	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_1|NZ_CP007809.1_923409_923961_-,NA|81aa|down_7|NZ_CP007809.1_929424_929667_+	NA|685aa|up_9|NZ_CP007809.1_905830_907885_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|389aa|up_8|NZ_CP007809.1_908050_909217_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP007809.1_909304_910321_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP007809.1_910482_911124_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP007809.1_911204_912260_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP007809.1_912311_912704_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP007809.1_912761_913184_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP007809.1_913145_913436_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP007809.1_913540_914446_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP007809.1_914464_915280_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|215aa|down_0|NZ_CP007809.1_922784_923429_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_1|NZ_CP007809.1_923409_923961_-	NA	NA|241aa|down_2|NZ_CP007809.1_924041_924764_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_3|NZ_CP007809.1_924834_925863_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_4|NZ_CP007809.1_926551_927322_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_5|NZ_CP007809.1_927408_928221_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_6|NZ_CP007809.1_928288_929149_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_7|NZ_CP007809.1_929424_929667_+	NA	NA|431aa|down_8|NZ_CP007809.1_929943_931236_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|335aa|down_9|NZ_CP007809.1_931219_932224_+	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	4	1564311-1565383	3	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	1	1	1564511-1564532	NZ_CP007809.1_1204025-1204004	NA	15	15	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|191aa|up_7|NZ_CP007809.1_1555819_1556392_+,NA	NA|103aa|up_9|NZ_CP007809.1_1553589_1553898_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP007809.1_1553894_1555514_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|191aa|up_7|NZ_CP007809.1_1555819_1556392_+	NA	NA|209aa|up_6|NZ_CP007809.1_1556526_1557153_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP007809.1_1557218_1557551_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP007809.1_1557566_1558823_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP007809.1_1558950_1560162_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP007809.1_1560234_1561713_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP007809.1_1561709_1563095_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP007809.1_1563172_1564207_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP007809.1_1566237_1566639_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP007809.1_1566635_1566893_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP007809.1_1566975_1567935_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP007809.1_1567959_1568922_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP007809.1_1569055_1569658_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP007809.1_1569738_1571706_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP007809.1_1571723_1572548_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP007809.1_1572716_1573199_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP007809.1_1573270_1574095_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP007809.1_1574291_1575230_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	5	2066018-2066272	2	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	1	1	2066189-2066206	NZ_CP007809.1_3438174-3438157	NA	5	5	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP007809.1_2065377_2065641_-,NA	NA|165aa|up_9|NZ_CP007809.1_2051727_2052222_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP007809.1_2052569_2053247_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP007809.1_2053605_2056431_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP007809.1_2056657_2057518_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP007809.1_2057558_2058425_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP007809.1_2058429_2060316_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP007809.1_2060331_2062365_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP007809.1_2062484_2064710_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP007809.1_2064985_2065381_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP007809.1_2065377_2065641_-	NA	NA|346aa|down_0|NZ_CP007809.1_2067409_2068447_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP007809.1_2068446_2069814_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NZ_CP007809.1_2069987_2071427_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP007809.1_2071459_2072911_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP007809.1_2072940_2073891_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP007809.1_2073905_2074322_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP007809.1_2074599_2075022_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_7|NZ_CP007809.1_2075070_2075373_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP007809.1_2075369_2075684_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP007809.1_2075683_2077417_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	6	2147888-2148107	4	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP007809.1_2136496_2136904_-,NA|127aa|down_5|NZ_CP007809.1_2155623_2156004_-	NA|155aa|up_9|NZ_CP007809.1_2129824_2130289_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP007809.1_2130464_2132687_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP007809.1_2132724_2133168_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP007809.1_2133281_2133875_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP007809.1_2133957_2134563_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP007809.1_2134662_2135667_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP007809.1_2135766_2136519_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP007809.1_2136496_2136904_-	NA	NA|767aa|up_1|NZ_CP007809.1_2137038_2139339_+	PLN02892, PLN02892, isocitrate lyase	NA|421aa|up_0|NZ_CP007809.1_2143464_2144726_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|155aa|down_0|NZ_CP007809.1_2150134_2150599_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP007809.1_2150696_2151560_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP007809.1_2151597_2152869_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP007809.1_2153140_2154256_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP007809.1_2154246_2155587_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP007809.1_2155623_2156004_-	NA	NA|621aa|down_6|NZ_CP007809.1_2156160_2158023_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP007809.1_2158030_2158510_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP007809.1_2158746_2159520_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP007809.1_2159523_2160291_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	7	3109953-3111100	1,5,3	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type III-D,Type III-A,Type III-B,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	14,14,15	15	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP007809.1_3103232_3103487_-,NA|135aa|up_7|NZ_CP007809.1_3103634_3104039_+,NA|64aa|up_6|NZ_CP007809.1_3104035_3104227_+,NA|86aa|up_4|NZ_CP007809.1_3105813_3106071_+,NA|104aa|up_3|NZ_CP007809.1_3106175_3106487_+,NA|203aa|up_2|NZ_CP007809.1_3106906_3107515_+,NA	NA|92aa|up_9|NZ_CP007809.1_3102781_3103057_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP007809.1_3103232_3103487_-	NA	NA|135aa|up_7|NZ_CP007809.1_3103634_3104039_+	NA	NA|64aa|up_6|NZ_CP007809.1_3104035_3104227_+	NA	NA|385aa|up_5|NZ_CP007809.1_3104425_3105580_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP007809.1_3105813_3106071_+	NA	NA|104aa|up_3|NZ_CP007809.1_3106175_3106487_+	NA	NA|203aa|up_2|NZ_CP007809.1_3106906_3107515_+	NA	NA|470aa|up_1|NZ_CP007809.1_3107585_3108995_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP007809.1_3108991_3109804_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP007809.1_3111131_3112393_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csm3gr7|237aa|down_1|NZ_CP007809.1_3112756_3113467_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_2|NZ_CP007809.1_3113476_3113851_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_3|NZ_CP007809.1_3113847_3116286_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_4|NZ_CP007809.1_3116282_3117005_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_5|NZ_CP007809.1_3117404_3117950_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|down_6|NZ_CP007809.1_3118221_3119106_-	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_7|NZ_CP007809.1_3119108_3119996_-	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|182aa|down_8|NZ_CP007809.1_3120300_3120846_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|down_9|NZ_CP007809.1_3120842_3121112_-	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	8	3651286-3651404	6	CRISPRCasFinder	no	cas3	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Unclear	GCCCCTGTGAGTCGAGTGAGCGGAACGAAC	30	1	1	3651316-3651374	NZ_CP007809.1_3651379-3651437	NA	1	1	Unclear	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|138aa|down_6|NZ_CP007809.1_3657037_3657451_-,NA|126aa|down_7|NZ_CP007809.1_3657485_3657863_-	NA|719aa|up_9|NZ_CP007809.1_3638112_3640269_+	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|223aa|up_8|NZ_CP007809.1_3640265_3640934_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|395aa|up_7|NZ_CP007809.1_3641034_3642219_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|765aa|up_6|NZ_CP007809.1_3642223_3644518_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|390aa|up_5|NZ_CP007809.1_3644506_3645676_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|175aa|up_4|NZ_CP007809.1_3645700_3646225_-	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase	NA|430aa|up_3|NZ_CP007809.1_3646221_3647511_-	TIGR01161, N5-carboxyaminoimidazole_ribonucleotide_synthase, phosphoribosylaminoimidazole carboxylase, PurK protein	NA|273aa|up_2|NZ_CP007809.1_3647464_3648283_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|173aa|up_1|NZ_CP007809.1_3648237_3648756_-	pfam03703, bPH_2, Bacterial PH domain	NA|267aa|up_0|NZ_CP007809.1_3648798_3649599_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|223aa|down_0|NZ_CP007809.1_3651670_3652339_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|298aa|down_1|NZ_CP007809.1_3652379_3653273_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|144aa|down_2|NZ_CP007809.1_3653269_3653701_+	COG2166, sufE, Cysteine desulfurase SufE subunit [Posttranslational modification, protein turnover, chaperones]	NA|601aa|down_3|NZ_CP007809.1_3653808_3655611_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|262aa|down_4|NZ_CP007809.1_3655620_3656406_-	PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed	NA|146aa|down_5|NZ_CP007809.1_3656402_3656840_-	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]	NA|138aa|down_6|NZ_CP007809.1_3657037_3657451_-	NA	NA|126aa|down_7|NZ_CP007809.1_3657485_3657863_-	NA	NA|450aa|down_8|NZ_CP007809.1_3657896_3659246_-	PRK08297, PRK08297, L-lysine aminotransferase; Provisional	NA|151aa|down_9|NZ_CP007809.1_3659296_3659749_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	9	3734518-3735094	4	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGTTGCCNCCGNNGCCGCCG	25	0	0	NA	NA	NA	7	7	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP007809.1_3751782_3752070_-,NA|87aa|down_8|NZ_CP007809.1_3765189_3765450_-	NA|282aa|up_9|NZ_CP007809.1_3708848_3709694_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP007809.1_3710168_3710609_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP007809.1_3710642_3711512_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP007809.1_3711532_3712543_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_5|NZ_CP007809.1_3712815_3713460_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP007809.1_3713526_3714756_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP007809.1_3715038_3716388_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP007809.1_3716399_3717539_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP007809.1_3717535_3718267_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|3644aa|up_0|NZ_CP007809.1_3718275_3729207_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP007809.1_3739652_3739910_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP007809.1_3740165_3749639_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP007809.1_3750264_3750711_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP007809.1_3750747_3751488_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP007809.1_3751782_3752070_-	NA	NA|265aa|down_5|NZ_CP007809.1_3763799_3764594_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_6|NZ_CP007809.1_3764675_3765047_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_7|NZ_CP007809.1_3764944_3765163_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_8|NZ_CP007809.1_3765189_3765450_-	NA	NA|130aa|down_9|NZ_CP007809.1_3765564_3765954_+	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	10	3736566-3737550	5	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGTTGCCNCCGNNNCCGCCGNTN	28	3	4	3736591-3736658|3736591-3736658|3736684-3736769|3736795-3736886	NZ_CP007809.1_3734222-3734289|NZ_CP007809.1_3929276-3929209|NZ_CP007809.1_3734315-3734400|NZ_CP007809.1_3734426-3734517	NA	11	11	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP007809.1_3751782_3752070_-,NA|87aa|down_8|NZ_CP007809.1_3765189_3765450_-	NA|282aa|up_9|NZ_CP007809.1_3708848_3709694_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP007809.1_3710168_3710609_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP007809.1_3710642_3711512_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP007809.1_3711532_3712543_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_5|NZ_CP007809.1_3712815_3713460_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP007809.1_3713526_3714756_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP007809.1_3715038_3716388_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP007809.1_3716399_3717539_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP007809.1_3717535_3718267_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|3644aa|up_0|NZ_CP007809.1_3718275_3729207_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP007809.1_3739652_3739910_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP007809.1_3740165_3749639_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP007809.1_3750264_3750711_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP007809.1_3750747_3751488_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP007809.1_3751782_3752070_-	NA	NA|265aa|down_5|NZ_CP007809.1_3763799_3764594_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_6|NZ_CP007809.1_3764675_3765047_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_7|NZ_CP007809.1_3764944_3765163_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_8|NZ_CP007809.1_3765189_3765450_-	NA	NA|130aa|down_9|NZ_CP007809.1_3765564_3765954_+	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	11	3845110-3845199	7	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_6|NZ_CP007809.1_3838505_3838736_+,NA|121aa|up_5|NZ_CP007809.1_3838839_3839202_-,NA|73aa|up_2|NZ_CP007809.1_3843175_3843394_-,NA|121aa|down_0|NZ_CP007809.1_3846184_3846547_-,NA|52aa|down_2|NZ_CP007809.1_3848388_3848544_-,NA|52aa|down_3|NZ_CP007809.1_3848568_3848724_-,NA|238aa|down_6|NZ_CP007809.1_3852759_3853473_-	NA|212aa|up_9|NZ_CP007809.1_3836184_3836820_-	COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|169aa|up_8|NZ_CP007809.1_3836816_3837323_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|409aa|up_7|NZ_CP007809.1_3837319_3838546_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_6|NZ_CP007809.1_3838505_3838736_+	NA	NA|121aa|up_5|NZ_CP007809.1_3838839_3839202_-	NA	NA|177aa|up_4|NZ_CP007809.1_3840160_3840691_+	pfam00823, PPE, PPE family	NA|725aa|up_3|NZ_CP007809.1_3841008_3843183_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|73aa|up_2|NZ_CP007809.1_3843175_3843394_-	NA	NA|100aa|up_1|NZ_CP007809.1_3843888_3844188_+	pfam00934, PE, PE family	NA|181aa|up_0|NZ_CP007809.1_3844273_3844816_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP007809.1_3846184_3846547_-	NA	NA|179aa|down_1|NZ_CP007809.1_3846709_3847246_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP007809.1_3848388_3848544_-	NA	NA|52aa|down_3|NZ_CP007809.1_3848568_3848724_-	NA	NA|461aa|down_4|NZ_CP007809.1_3849916_3851299_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP007809.1_3851336_3852758_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP007809.1_3852759_3853473_-	NA	NA|285aa|down_7|NZ_CP007809.1_3853483_3854338_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP007809.1_3854559_3856434_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP007809.1_3856455_3856932_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	12	3946810-3948561	6	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	11	3947401-3947436|3947401-3947436|3947401-3947436|3947401-3947436|3947401-3947436|3947401-3947436|3948292-3948318|3948292-3948318|3948292-3948318|3948292-3948318|3948292-3948318	NZ_CP007809.1_3733495-3733460|NZ_CP007809.1_3733846-3733811|NZ_CP007809.1_3736215-3736180|NZ_CP007809.1_3934580-3934615|NZ_CP007809.1_3946450-3946485|NZ_CP007809.1_3946801-3946836|NZ_CP007809.1_360605-360631|NZ_CP007809.1_3929768-3929794|NZ_CP007809.1_3941769-3941795|NZ_CP007809.1_3942105-3942131|NZ_CP007809.1_3942450-3942476	NA	21	21	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP007809.1_3951876_3952716_+	NA|401aa|up_9|NZ_CP007809.1_3919827_3921030_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_8|NZ_CP007809.1_3921054_3922176_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_7|NZ_CP007809.1_3922246_3923755_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1382aa|up_6|NZ_CP007809.1_3923925_3928071_+	pfam00934, PE, PE family	NA|219aa|up_5|NZ_CP007809.1_3932920_3933577_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|516aa|up_4|NZ_CP007809.1_3937388_3938936_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_3|NZ_CP007809.1_3938932_3939769_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|126aa|up_2|NZ_CP007809.1_3942268_3942646_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|508aa|up_1|NZ_CP007809.1_3942679_3944203_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|219aa|up_0|NZ_CP007809.1_3944331_3944988_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP007809.1_3949269_3950916_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP007809.1_3950989_3951781_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP007809.1_3951876_3952716_+	NA	NA|399aa|down_3|NZ_CP007809.1_3952770_3953967_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP007809.1_3953995_3954706_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP007809.1_3954770_3955814_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP007809.1_3955966_3956878_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP007809.1_3956893_3957958_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP007809.1_3957974_3959159_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP007809.1_3959200_3960232_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_000706665.1_ASM70666v1	NZ_CP007809	Mycobacterium tuberculosis strain KIT87190 chromosome, complete genome	13	4109585-4109673	8	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP007809.1_4100171_4100942_-,NA|233aa|up_0|NZ_CP007809.1_4108689_4109388_-,NA|126aa|down_6|NZ_CP007809.1_4114908_4115286_+	NA|388aa|up_9|NZ_CP007809.1_4095842_4097006_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP007809.1_4097002_4098055_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP007809.1_4098553_4099417_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP007809.1_4100171_4100942_-	NA	NA|549aa|up_5|NZ_CP007809.1_4100938_4102585_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP007809.1_4102581_4103445_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP007809.1_4103437_4104364_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP007809.1_4104365_4105991_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP007809.1_4106698_4108654_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP007809.1_4108689_4109388_-	NA	NA|173aa|down_0|NZ_CP007809.1_4109733_4110252_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP007809.1_4110252_4111236_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP007809.1_4111228_4112422_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP007809.1_4112427_4113249_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP007809.1_4113380_4114064_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP007809.1_4114063_4114801_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP007809.1_4114908_4115286_+	NA	NA|225aa|down_7|NZ_CP007809.1_4115384_4116059_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP007809.1_4116164_4116959_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP007809.1_4116965_4117421_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
