The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006030	Enterococcus faecium T110, complete genome	2693877	993590	1064800	2693877	tail,tRNA,transposase,integrase,capsid	Bacillus_phage(30.0%)	70	997552:997570	1046052:1046070
WP_002333405.1|993590_994781_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002318477.1|995251_995806_+|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_002295762.1|995868_996954_-	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_002295764.1|997275_997509_+	addiction module antitoxin	NA	NA	NA	NA	NA
WP_038398637.1|997505_997913_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
997552:997570	attL	TGATCCAAATAAAAAAATA	NA	NA	NA	NA
WP_010732253.1|1000199_1000949_-	response regulator	NA	NA	NA	NA	NA
WP_038399207.1|1001068_1002214_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_038398639.1|1002420_1004625_+	beta-glucosidase	NA	NA	NA	NA	NA
WP_038398640.1|1004640_1005987_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002346011.1|1005986_1006901_+	ROK family protein	NA	NA	NA	NA	NA
WP_038398642.1|1006884_1008252_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	28.5	8.6e-45
WP_038398645.1|1008256_1009222_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_038398646.1|1009259_1010816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038398648.1|1010784_1012497_+	DUF4091 domain-containing protein	NA	NA	NA	NA	NA
WP_038398650.1|1012817_1013855_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_038398652.1|1013879_1014632_+	phosphonate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.0	2.0e-27
WP_038398654.1|1014643_1015441_+	phosphate/phosphonate ABC transporter permease	NA	NA	NA	NA	NA
WP_080283903.1|1015440_1016328_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_038398655.1|1016354_1017170_+	histidinol-phosphatase	NA	NA	NA	NA	NA
WP_038398657.1|1017263_1017758_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_038398659.1|1018129_1019023_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_038398661.1|1019186_1020077_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_038398662.1|1020093_1020951_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_038398664.1|1020972_1021671_+	DUF1361 domain-containing protein	NA	NA	NA	NA	NA
WP_038398666.1|1021645_1022302_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.5	2.9e-38
WP_010732273.1|1023677_1024271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038398669.1|1024482_1026147_+	acetolactate synthase AlsS	NA	NA	NA	NA	NA
WP_002313570.1|1026159_1026870_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_038398671.1|1026998_1027496_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002289617.1|1027681_1027942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038398672.1|1029323_1030097_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002290403.1|1030240_1030591_+	SdpI family protein	NA	NA	NA	NA	NA
WP_002290404.1|1030571_1031288_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	6.1e-34
WP_038398675.1|1031287_1032736_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	6.0e-20
WP_038398676.1|1032808_1033318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038398678.1|1033307_1034033_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010732280.1|1034204_1036325_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.4	5.7e-221
WP_038398680.1|1036553_1037732_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	49.5	6.0e-103
WP_038398682.1|1037747_1038500_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.8	3.8e-26
WP_002290411.1|1038522_1039008_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_038398684.1|1039078_1040332_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	4.5e-24
WP_038398686.1|1040448_1041798_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_002290415.1|1041909_1043256_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_038398688.1|1043358_1044582_-|integrase	site-specific integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	43.0	3.3e-80
WP_010728284.1|1044760_1045627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010728285.1|1045748_1046315_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
1046052:1046070	attR	TATTTTTTTATTTGGATCA	NA	NA	NA	NA
WP_080283918.1|1046451_1046589_-	SHOCT domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	64.1	2.5e-05
WP_049827218.1|1046542_1047142_-	glycine zipper family protein	NA	X5JB37	Clostridium_phage	48.0	5.7e-17
WP_010732289.1|1047201_1047669_-	ImmA/IrrE family metallo-endopeptidase	NA	R4IBK9	Listeria_phage	38.0	3.5e-22
WP_010732290.1|1047679_1048006_-	helix-turn-helix transcriptional regulator	NA	A8ATJ9	Listeria_phage	58.2	2.1e-18
WP_038398690.1|1048177_1048402_+	helix-turn-helix transcriptional regulator	NA	A8ATK0	Listeria_phage	62.7	4.6e-12
WP_038398692.1|1048613_1049168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086956687.1|1049293_1050455_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_038398695.1|1050641_1051046_+	hypothetical protein	NA	Q5YA68	Bacillus_phage	61.9	1.4e-40
WP_038398697.1|1051039_1051381_+	phage Gp9 family protein	NA	Q5YA67	Bacillus_phage	60.2	3.1e-36
WP_038398699.1|1051380_1051707_+|capsid	phage capsid protein	capsid	Q5YA66	Bacillus_phage	54.4	1.1e-27
WP_038398701.1|1051706_1052108_+|capsid	phage capsid protein	capsid	Q5YA65	Bacillus_phage	55.0	1.7e-38
WP_038398703.1|1052104_1052563_+	hypothetical protein	NA	Q5YA64	Bacillus_phage	49.0	3.8e-29
WP_010732318.1|1052543_1052903_+	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
WP_038398705.1|1052943_1053378_+	hypothetical protein	NA	A0A141DZI4	Streptococcus_phage	28.1	1.8e-09
WP_002326214.1|1053386_1053968_+	hypothetical protein	NA	Q5YA62	Bacillus_phage	49.0	1.0e-39
WP_038398707.1|1053960_1057443_+	tape measure protein	NA	Q938K3	Temperate_phage	52.6	3.5e-10
WP_038398708.1|1057447_1058281_+|tail	phage tail family protein	tail	Q9T1A6	Listeria_phage	44.6	1.4e-58
WP_038398710.1|1058289_1059333_+	phage minor structural protein	NA	Q9T1A5	Listeria_phage	54.4	2.1e-104
WP_002313625.1|1059332_1060382_+	hypothetical protein	NA	Q9T1A4	Listeria_phage	32.7	3.9e-21
WP_038398711.1|1060381_1062616_+	DUF2479 domain-containing protein	NA	A0A096XSZ6	Enterococcus_phage	43.0	3.5e-59
WP_038398712.1|1062634_1063081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002334791.1|1063082_1063220_+	XkdX family protein	NA	NA	NA	NA	NA
WP_002308840.1|1063257_1063551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002308842.1|1063783_1064800_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	65.5	9.2e-60
>prophage 2
NZ_CP006030	Enterococcus faecium T110, complete genome	2693877	1528797	1537845	2693877		Gordonia_phage(16.67%)	9	NA	NA
WP_002374404.1|1528797_1530093_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	7.7e-19
WP_038398851.1|1530259_1530637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002374406.1|1530892_1531621_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	40.9	1.6e-42
WP_002309490.1|1531620_1531875_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002292228.1|1531876_1532548_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_038398854.1|1532548_1534771_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	3.5e-152
WP_002374411.1|1534755_1536195_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.3e-53
WP_033795753.1|1536226_1537270_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.7e-61
WP_002374419.1|1537266_1537845_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	1.0e-26
>prophage 3
NZ_CP006030	Enterococcus faecium T110, complete genome	2693877	1908626	1985410	2693877	tail,tRNA,protease,holin,head,integrase,capsid,terminase,portal	Enterococcus_phage(54.05%)	93	1944710:1944745	1984759:1984794
WP_002375264.1|1908626_1911425_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.6	1.1e-75
WP_002286622.1|1911685_1912393_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_002375265.1|1912413_1913196_-	RNA-binding protein	NA	NA	NA	NA	NA
WP_073357513.1|1913244_1913532_-	YggT family protein	NA	NA	NA	NA	NA
WP_002375266.1|1913546_1914146_-	cell division protein SepF	NA	NA	NA	NA	NA
WP_002310280.1|1914159_1914837_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_002291854.1|1914853_1916095_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002291855.1|1916117_1917443_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_025478576.1|1917598_1918831_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA	NA
WP_002375268.1|1918845_1919934_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_002315409.1|1919959_1921321_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_002375269.1|1921334_1922297_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_002375270.1|1922322_1924515_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_002297992.1|1924515_1924917_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002375271.1|1924921_1925881_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002291870.1|1925901_1926333_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_002291871.1|1926502_1926871_-	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_025478577.1|1927041_1927998_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002291876.1|1928070_1928187_+	DUF4044 domain-containing protein	NA	NA	NA	NA	NA
WP_002375273.1|1928240_1929923_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_002286653.1|1929940_1930390_-	arginine repressor	NA	NA	NA	NA	NA
WP_002310269.1|1930496_1931315_-	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_002375275.1|1931323_1932214_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_002286657.1|1932215_1932440_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_002315413.1|1932444_1933782_-	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	29.0	5.1e-26
WP_002375276.1|1933782_1934637_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.7	3.1e-40
WP_002286662.1|1934731_1935181_-	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_002291889.1|1935173_1935599_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002315415.1|1935845_1936910_-	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_002291892.1|1937081_1937327_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002310263.1|1937465_1937840_-	DUF956 family protein	NA	NA	NA	NA	NA
WP_002310262.1|1937922_1938837_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_002294546.1|1938857_1939661_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
WP_002289456.1|1939693_1940683_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_002289455.1|1940785_1941277_-	PTS fructose transporter subunit IIB	NA	NA	NA	NA	NA
1944710:1944745	attL	ATTAAGCTTCTTGAGCTACTGGATAAACAGACACTT	NA	NA	NA	NA
WP_038398982.1|1944922_1945717_+	DUF4428 domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	32.9	3.3e-12
WP_002333318.1|1945810_1946113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038398983.1|1946884_1947667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038398985.1|1947668_1948106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038398986.1|1948080_1948590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038398987.1|1948827_1949844_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	56.5	1.5e-62
WP_002334690.1|1949854_1950052_-|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	82.8	8.6e-23
WP_038398988.1|1950074_1950368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290625.1|1950404_1950542_-	XkdX family protein	NA	NA	NA	NA	NA
WP_038398989.1|1950543_1950990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038398990.1|1951003_1953241_-	DUF2479 domain-containing protein	NA	A0A288TYH2	Enterococcus_phage	54.5	5.8e-107
WP_038398991.1|1953256_1954015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038399224.1|1954028_1955813_-	DUF2479 domain-containing protein	NA	Q9AZX4	Lactococcus_phage	43.1	1.9e-39
WP_038398992.1|1955787_1958619_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8BMB8	Lactococcus_phage	60.4	0.0e+00
WP_025479340.1|1958615_1959383_-|tail	phage tail protein	tail	D7RWD9	Brochothrix_phage	45.1	1.2e-59
WP_038398994.1|1959415_1962238_-|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	71.1	1.4e-169
WP_002332769.1|1962254_1962515_-	hypothetical protein	NA	A0A2P1JTY6	Anoxybacillus_phage	50.0	1.6e-05
WP_008274563.1|1962595_1962964_-	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	54.8	8.6e-24
WP_002322707.1|1963009_1963522_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	66.9	1.9e-58
WP_038398998.1|1963532_1963925_-|capsid	phage capsid protein	capsid	Q77K20	Lactococcus_phage	73.8	9.0e-48
WP_002318275.1|1963924_1964263_-	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	59.8	3.0e-31
WP_002293014.1|1964246_1964573_-	hypothetical protein	NA	C9E2J7	Enterococcus_phage	70.2	1.2e-37
WP_038399001.1|1964569_1964899_-|head,tail	phage gp6-like head-tail connector domain protein	head,tail	A0A0S2MYD5	Enterococcus_phage	75.5	1.1e-38
WP_038399003.1|1964910_1965174_-	hypothetical protein	NA	D2J062	Enterococcus_phage	75.0	6.5e-10
WP_002322711.1|1965191_1966115_-|capsid	phage major capsid protein	capsid	A0A1B1V000	Enterococcus_phage	77.5	1.8e-139
WP_002322712.1|1966127_1966730_-	DUF4355 domain-containing protein	NA	A0A097BY91	Enterococcus_phage	52.5	1.1e-36
WP_002323698.1|1966856_1967783_-	hypothetical protein	NA	A0A1L2JXH2	Streptococcus_phage	58.7	9.8e-93
WP_002323927.1|1967787_1969287_-|portal	phage portal protein	portal	A0A097BY86	Enterococcus_phage	78.9	2.1e-222
WP_038399006.1|1969299_1970544_-|terminase	PBSX family phage terminase large subunit	terminase	D2IYW1	Enterococcus_phage	81.6	3.8e-201
WP_038399007.1|1970530_1971379_-|terminase	small subunit of terminase	terminase	D2IYW0	Enterococcus_phage	64.2	5.3e-85
WP_038399009.1|1971425_1972163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002293005.1|1972541_1972754_-	hypothetical protein	NA	D2IZF7	Enterococcus_phage	59.6	3.8e-08
WP_038399012.1|1972803_1973745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002318885.1|1974136_1974553_-	autolysin	NA	C9E2P5	Enterococcus_phage	68.1	4.8e-47
WP_038399013.1|1974629_1974926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038399014.1|1974922_1975126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002330136.1|1975122_1975497_-	hypothetical protein	NA	F0PIH7	Enterococcus_phage	70.5	3.5e-41
WP_038399016.1|1975493_1975805_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	72.7	1.6e-34
WP_002321686.1|1975804_1976095_-	hypothetical protein	NA	D2IZR3	Enterococcus_phage	44.4	8.2e-14
WP_002376431.1|1976088_1976400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296606.1|1976396_1976558_-	antitoxin	NA	NA	NA	NA	NA
WP_038399018.1|1976554_1976857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038399019.1|1977019_1977289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038399020.1|1977300_1978050_-	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	54.0	1.3e-31
WP_010721322.1|1978053_1978740_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	70.0	2.9e-89
WP_010721321.1|1978745_1979480_-	DUF1071 domain-containing protein	NA	A0A2I7RDU5	Vibrio_phage	51.6	2.8e-42
WP_038399021.1|1979472_1979814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002330305.1|1980332_1980617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322001.1|1980594_1980807_-	helix-turn-helix transcriptional regulator	NA	D2IZW2	Enterococcus_phage	52.7	3.4e-09
WP_038399023.1|1980809_1981586_-	antirepressor	NA	B2ZYU5	Staphylococcus_phage	54.8	4.7e-72
WP_002321999.1|1981662_1981863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038399026.1|1981834_1982065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002301535.1|1982363_1982711_+	helix-turn-helix transcriptional regulator	NA	A0A097QQ00	Enterococcus_phage	61.6	9.2e-28
WP_029682085.1|1982746_1983142_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002305409.1|1983195_1983507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002301539.1|1983518_1984667_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	40.1	3.0e-67
WP_002289452.1|1984759_1985053_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
1984759:1984794	attR	ATTAAGCTTCTTGAGCTACTGGATAAACAGACACTT	NA	NA	NA	NA
WP_002289451.1|1985065_1985410_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
>prophage 4
NZ_CP006030	Enterococcus faecium T110, complete genome	2693877	2004621	2013216	2693877		Streptococcus_phage(66.67%)	9	NA	NA
WP_002292349.1|2004621_2006811_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.7	6.8e-286
WP_002372753.1|2007248_2007851_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.0	2.2e-53
WP_002310241.1|2007904_2009026_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002372757.1|2009134_2010007_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	6.2e-89
WP_002288076.1|2010075_2010423_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_010733351.1|2010415_2011240_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002292342.1|2011275_2012214_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.8	6.1e-34
WP_002292340.1|2012227_2012557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002292339.1|2012571_2013216_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
>prophage 5
NZ_CP006030	Enterococcus faecium T110, complete genome	2693877	2248204	2273171	2693877	bacteriocin,protease,transposase	Staphylococcus_phage(37.5%)	22	NA	NA
WP_002374818.1|2248204_2248867_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_038399086.1|2248943_2250242_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_010732914.1|2250411_2251041_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002288854.1|2251142_2251952_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	33.6	3.1e-34
WP_002374824.1|2252006_2252876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025478526.1|2252876_2254193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290593.1|2254189_2256025_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.7	5.2e-37
WP_002374828.1|2256029_2256734_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	4.4e-45
WP_002374830.1|2256923_2257784_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.5	6.0e-12
WP_002290590.1|2257773_2258340_-	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_002294609.1|2259290_2259677_-	DUF4064 domain-containing protein	NA	NA	NA	NA	NA
WP_002294608.1|2259673_2260195_-	RDD family protein	NA	NA	NA	NA	NA
WP_002294607.1|2260196_2261231_-	signal peptide peptidase SppA	NA	A0A1C9LW82	Vibrio_phage	29.2	6.6e-13
WP_002374837.1|2261263_2262679_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_038399088.1|2262845_2264018_+|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.4	1.7e-121
WP_002374840.1|2266390_2266627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002374842.1|2266645_2266870_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002343057.1|2267025_2267934_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_002325334.1|2268597_2269350_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002323245.1|2269505_2270678_+|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_049827219.1|2270705_2271944_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_002323245.1|2271998_2273171_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
