assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000739395.1_ASM73939v1	NZ_CP007627	Flavobacterium psychrophilum strain CSF259-93 chromosome, complete genome	1	5892-5995	1	CRISPRCasFinder	no		cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	Orphan	TTAATCTATATTCAAAAATCAAAT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	NA,NA|128aa|down_5|NZ_CP007627.1_15602_15986_-,NA|146aa|down_7|NZ_CP007627.1_17693_18131_+,NA|431aa|down_8|NZ_CP007627.1_18165_19458_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|141aa|up_1|NZ_CP007627.1_3325_3748_+	TIGR00043, Endoribonuclease_YbeY, rRNA maturation RNase YbeY	NA|624aa|up_0|NZ_CP007627.1_3958_5830_+	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|188aa|down_0|NZ_CP007627.1_7105_7669_+	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|827aa|down_1|NZ_CP007627.1_8502_10983_+	pfam13573, SprB, SprB repeat	NA|758aa|down_2|NZ_CP007627.1_11325_13599_+	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1	NA|184aa|down_3|NZ_CP007627.1_14449_15001_-	pfam12867, DinB_2, DinB superfamily	NA|170aa|down_4|NZ_CP007627.1_15056_15566_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|128aa|down_5|NZ_CP007627.1_15602_15986_-	NA	NA|383aa|down_6|NZ_CP007627.1_16116_17265_-	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit	NA|146aa|down_7|NZ_CP007627.1_17693_18131_+	NA	NA|431aa|down_8|NZ_CP007627.1_18165_19458_+	NA	NA|478aa|down_9|NZ_CP007627.1_19590_21024_+	pfam13585, CHU_C, C-terminal domain of CHU protein family
GCF_000739395.1_ASM73939v1	NZ_CP007627	Flavobacterium psychrophilum strain CSF259-93 chromosome, complete genome	2	236386-236686	2	CRISPRCasFinder	no	cas3	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	Unclear	CAATAGAAGTTACAGAATTAGGAAT	25	0	0	NA	NA	NA	4	4	Unclear	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	NA,NA|203aa|down_8|NZ_CP007627.1_246021_246630_-	NA|330aa|up_9|NZ_CP007627.1_224812_225802_-	sd00036, LRR_3, leucine-rich repeats	NA|353aa|up_8|NZ_CP007627.1_225817_226876_-	sd00036, LRR_3, leucine-rich repeats	NA|330aa|up_7|NZ_CP007627.1_226891_227881_-	sd00036, LRR_3, leucine-rich repeats	NA|399aa|up_6|NZ_CP007627.1_228207_229404_-	sd00036, LRR_3, leucine-rich repeats	NA|422aa|up_5|NZ_CP007627.1_229419_230685_-	sd00036, LRR_3, leucine-rich repeats	NA|330aa|up_4|NZ_CP007627.1_230998_231988_-	sd00036, LRR_3, leucine-rich repeats	NA|352aa|up_3|NZ_CP007627.1_232002_233058_-	sd00036, LRR_3, leucine-rich repeats	NA|283aa|up_2|NZ_CP007627.1_233073_233922_-	pfam13306, LRR_5, Leucine rich repeats (6 copies)	NA|283aa|up_1|NZ_CP007627.1_233936_234785_-	pfam13306, LRR_5, Leucine rich repeats (6 copies)	NA|376aa|up_0|NZ_CP007627.1_234799_235927_-	sd00036, LRR_3, leucine-rich repeats	NA|222aa|down_0|NZ_CP007627.1_237514_238180_+	pfam14093, DUF4271, Domain of unknown function (DUF4271)	NA|250aa|down_1|NZ_CP007627.1_238200_238950_+	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme	NA|257aa|down_2|NZ_CP007627.1_239015_239786_+	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|135aa|down_3|NZ_CP007627.1_239858_240263_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|705aa|down_4|NZ_CP007627.1_240262_242377_-	pfam14134, DUF4301, Domain of unknown function (DUF4301)	NA|211aa|down_5|NZ_CP007627.1_242337_242970_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|214aa|down_6|NZ_CP007627.1_243703_244345_-	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|439aa|down_7|NZ_CP007627.1_244570_245887_+	smart00996, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|203aa|down_8|NZ_CP007627.1_246021_246630_-	NA	NA|317aa|down_9|NZ_CP007627.1_246749_247700_+	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs
GCF_000739395.1_ASM73939v1	NZ_CP007627	Flavobacterium psychrophilum strain CSF259-93 chromosome, complete genome	3	687854-687967	3	CRISPRCasFinder	no		cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	Orphan	TCTCAACACTTTTTTGCGTTCAGTTCGGT	29	1	13	687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938|687883-687938	NZ_CP007627.1_697909-697964|NZ_CP007627.1_698356-698411|NZ_CP007627.1_710502-710557|NZ_CP007627.1_714839-714894|NZ_CP007627.1_715286-715341|NZ_CP007627.1_715733-715788|NZ_CP007627.1_716180-716235|NZ_CP007627.1_717987-718042|NZ_CP007627.1_718434-718489|NZ_CP007627.1_719729-719784|NZ_CP007627.1_720176-720231|NZ_CP007627.1_720623-720678|NZ_CP007627.1_682365-682310	NA	1	1	Orphan	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	NA|103aa|up_9|NZ_CP007627.1_677987_678296_+,NA|197aa|up_6|NZ_CP007627.1_680049_680640_+,NA|256aa|up_5|NZ_CP007627.1_681061_681829_+,NA|249aa|up_4|NZ_CP007627.1_682657_683404_+,NA|67aa|up_2|NZ_CP007627.1_685949_686150_+,NA|47aa|up_1|NZ_CP007627.1_686139_686280_-,NA|418aa|down_0|NZ_CP007627.1_688675_689929_-,NA|73aa|down_1|NZ_CP007627.1_690162_690381_+,NA|87aa|down_2|NZ_CP007627.1_690587_690848_+,NA|170aa|down_3|NZ_CP007627.1_691204_691714_+,NA|115aa|down_4|NZ_CP007627.1_691854_692199_+,NA|113aa|down_5|NZ_CP007627.1_692191_692530_-,NA|126aa|down_7|NZ_CP007627.1_694830_695208_-,NA|242aa|down_9|NZ_CP007627.1_696883_697609_-	NA|103aa|up_9|NZ_CP007627.1_677987_678296_+	NA	NA|142aa|up_8|NZ_CP007627.1_678672_679098_+	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|225aa|up_7|NZ_CP007627.1_679362_680037_+	pfam11153, DUF2931, Protein of unknown function (DUF2931)	NA|197aa|up_6|NZ_CP007627.1_680049_680640_+	NA	NA|256aa|up_5|NZ_CP007627.1_681061_681829_+	NA	NA|249aa|up_4|NZ_CP007627.1_682657_683404_+	NA	NA|401aa|up_3|NZ_CP007627.1_683698_684901_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|67aa|up_2|NZ_CP007627.1_685949_686150_+	NA	NA|47aa|up_1|NZ_CP007627.1_686139_686280_-	NA	NA|323aa|up_0|NZ_CP007627.1_686627_687596_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|418aa|down_0|NZ_CP007627.1_688675_689929_-	NA	NA|73aa|down_1|NZ_CP007627.1_690162_690381_+	NA	NA|87aa|down_2|NZ_CP007627.1_690587_690848_+	NA	NA|170aa|down_3|NZ_CP007627.1_691204_691714_+	NA	NA|115aa|down_4|NZ_CP007627.1_691854_692199_+	NA	NA|113aa|down_5|NZ_CP007627.1_692191_692530_-	NA	NA|594aa|down_6|NZ_CP007627.1_692722_694504_-	TIGR04141, conserved_hypothetical_protein, sporadically distributed protein, TIGR04141 family	NA|126aa|down_7|NZ_CP007627.1_694830_695208_-	NA	NA|155aa|down_8|NZ_CP007627.1_695200_695665_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|242aa|down_9|NZ_CP007627.1_696883_697609_-	NA
GCF_000739395.1_ASM73939v1	NZ_CP007627	Flavobacterium psychrophilum strain CSF259-93 chromosome, complete genome	4	696491-696615	4	CRISPRCasFinder	no		cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	Orphan	AGTTTTTTCTCCACACTTTTTTGCGTTCAGTTCGG	35	1	14	696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580|696526-696580	NZ_CP007627.1_601722-601668|NZ_CP007627.1_602176-602122|NZ_CP007627.1_603101-603047|NZ_CP007627.1_688330-688384|NZ_CP007627.1_705246-705300|NZ_CP007627.1_708750-708804|NZ_CP007627.1_709203-709257|NZ_CP007627.1_712256-712310|NZ_CP007627.1_712710-712764|NZ_CP007627.1_716627-716681|NZ_CP007627.1_717080-717134|NZ_CP007627.1_717533-717587|NZ_CP007627.1_722023-722077|NZ_CP007627.1_611125-611071	NA	1	1	Orphan	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	NA|418aa|up_8|NZ_CP007627.1_688675_689929_-,NA|73aa|up_7|NZ_CP007627.1_690162_690381_+,NA|87aa|up_6|NZ_CP007627.1_690587_690848_+,NA|170aa|up_5|NZ_CP007627.1_691204_691714_+,NA|115aa|up_4|NZ_CP007627.1_691854_692199_+,NA|113aa|up_3|NZ_CP007627.1_692191_692530_-,NA|126aa|up_1|NZ_CP007627.1_694830_695208_-,NA|242aa|down_0|NZ_CP007627.1_696883_697609_-,NA|76aa|down_3|NZ_CP007627.1_700786_701014_+,NA|93aa|down_5|NZ_CP007627.1_703663_703942_+,NA|60aa|down_6|NZ_CP007627.1_704151_704331_+,NA|50aa|down_7|NZ_CP007627.1_704327_704477_-,NA|129aa|down_8|NZ_CP007627.1_704480_704867_+,NA|75aa|down_9|NZ_CP007627.1_705611_705836_+	NA|323aa|up_9|NZ_CP007627.1_686627_687596_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|418aa|up_8|NZ_CP007627.1_688675_689929_-	NA	NA|73aa|up_7|NZ_CP007627.1_690162_690381_+	NA	NA|87aa|up_6|NZ_CP007627.1_690587_690848_+	NA	NA|170aa|up_5|NZ_CP007627.1_691204_691714_+	NA	NA|115aa|up_4|NZ_CP007627.1_691854_692199_+	NA	NA|113aa|up_3|NZ_CP007627.1_692191_692530_-	NA	NA|594aa|up_2|NZ_CP007627.1_692722_694504_-	TIGR04141, conserved_hypothetical_protein, sporadically distributed protein, TIGR04141 family	NA|126aa|up_1|NZ_CP007627.1_694830_695208_-	NA	NA|155aa|up_0|NZ_CP007627.1_695200_695665_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|242aa|down_0|NZ_CP007627.1_696883_697609_-	NA	NA|336aa|down_1|NZ_CP007627.1_698642_699650_-	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|214aa|down_2|NZ_CP007627.1_699636_700278_-	pfam09019, EcoRII-C, EcoRII C terminal	NA|76aa|down_3|NZ_CP007627.1_700786_701014_+	NA	NA|755aa|down_4|NZ_CP007627.1_701161_703426_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|93aa|down_5|NZ_CP007627.1_703663_703942_+	NA	NA|60aa|down_6|NZ_CP007627.1_704151_704331_+	NA	NA|50aa|down_7|NZ_CP007627.1_704327_704477_-	NA	NA|129aa|down_8|NZ_CP007627.1_704480_704867_+	NA	NA|75aa|down_9|NZ_CP007627.1_705611_705836_+	NA
GCF_000739395.1_ASM73939v1	NZ_CP007627	Flavobacterium psychrophilum strain CSF259-93 chromosome, complete genome	5	707346-707459	5	CRISPRCasFinder	no		cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	Orphan	TCTCAACACTTTTTTGCGTTCAGTTCGGT	29	1	13	707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430|707375-707430	NZ_CP007627.1_697909-697964|NZ_CP007627.1_698356-698411|NZ_CP007627.1_710502-710557|NZ_CP007627.1_714839-714894|NZ_CP007627.1_715286-715341|NZ_CP007627.1_715733-715788|NZ_CP007627.1_716180-716235|NZ_CP007627.1_717987-718042|NZ_CP007627.1_718434-718489|NZ_CP007627.1_719729-719784|NZ_CP007627.1_720176-720231|NZ_CP007627.1_720623-720678|NZ_CP007627.1_682365-682310	NA	1	1	Orphan	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	NA|76aa|up_7|NZ_CP007627.1_700786_701014_+,NA|93aa|up_5|NZ_CP007627.1_703663_703942_+,NA|60aa|up_4|NZ_CP007627.1_704151_704331_+,NA|50aa|up_3|NZ_CP007627.1_704327_704477_-,NA|129aa|up_2|NZ_CP007627.1_704480_704867_+,NA|75aa|up_1|NZ_CP007627.1_705611_705836_+,NA|169aa|up_0|NZ_CP007627.1_706488_706995_+,NA|242aa|down_0|NZ_CP007627.1_707725_708451_-,NA|75aa|down_1|NZ_CP007627.1_710023_710248_+,NA|169aa|down_2|NZ_CP007627.1_711369_711876_+,NA|75aa|down_3|NZ_CP007627.1_713075_713300_+,NA|169aa|down_4|NZ_CP007627.1_713952_714459_+,NA|418aa|down_9|NZ_CP007627.1_724853_726107_-	NA|336aa|up_9|NZ_CP007627.1_698642_699650_-	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|214aa|up_8|NZ_CP007627.1_699636_700278_-	pfam09019, EcoRII-C, EcoRII C terminal	NA|76aa|up_7|NZ_CP007627.1_700786_701014_+	NA	NA|755aa|up_6|NZ_CP007627.1_701161_703426_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|93aa|up_5|NZ_CP007627.1_703663_703942_+	NA	NA|60aa|up_4|NZ_CP007627.1_704151_704331_+	NA	NA|50aa|up_3|NZ_CP007627.1_704327_704477_-	NA	NA|129aa|up_2|NZ_CP007627.1_704480_704867_+	NA	NA|75aa|up_1|NZ_CP007627.1_705611_705836_+	NA	NA|169aa|up_0|NZ_CP007627.1_706488_706995_+	NA	NA|242aa|down_0|NZ_CP007627.1_707725_708451_-	NA	NA|75aa|down_1|NZ_CP007627.1_710023_710248_+	NA	NA|169aa|down_2|NZ_CP007627.1_711369_711876_+	NA	NA|75aa|down_3|NZ_CP007627.1_713075_713300_+	NA	NA|169aa|down_4|NZ_CP007627.1_713952_714459_+	NA	NA|97aa|down_5|NZ_CP007627.1_718774_719065_-	pfam01381, HTH_3, Helix-turn-helix	NA|114aa|down_6|NZ_CP007627.1_719067_719409_-	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|261aa|down_7|NZ_CP007627.1_720966_721749_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|755aa|down_8|NZ_CP007627.1_722370_724635_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|418aa|down_9|NZ_CP007627.1_724853_726107_-	NA
GCF_000739395.1_ASM73939v1	NZ_CP007627	Flavobacterium psychrophilum strain CSF259-93 chromosome, complete genome	6	1425322-1427109	6,1	CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas9	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	 Type II-B, or Type II-C?,Type II-A,Type II-C,Type II-B	GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC,GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC	46,46	1	1	1425519-1425548	NZ_CP007627.1_1485924-1485895	NA:NA	23,22	23	TypeII-B,orTypeII-C?,TypeII-A,TypeII-C,TypeII-B	cas3,DEDDh,PrimPol,PD-DExK,cas2,cas1,cas9,WYL	NA|387aa|up_7|NZ_CP007627.1_1413908_1415069_+,NA|447aa|up_5|NZ_CP007627.1_1417083_1418424_+,NA|487aa|down_4|NZ_CP007627.1_1441823_1443284_-,NA|134aa|down_9|NZ_CP007627.1_1447547_1447949_-	NA|286aa|up_9|NZ_CP007627.1_1410850_1411708_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|716aa|up_8|NZ_CP007627.1_1411759_1413907_+	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase	NA|387aa|up_7|NZ_CP007627.1_1413908_1415069_+	NA	NA|665aa|up_6|NZ_CP007627.1_1415070_1417065_+	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase	NA|447aa|up_5|NZ_CP007627.1_1417083_1418424_+	NA	NA|216aa|up_4|NZ_CP007627.1_1418393_1419041_+	cd16336, MukE, bacterial condensin complex subunit MukE	NA|1080aa|up_3|NZ_CP007627.1_1419037_1422277_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|280aa|up_2|NZ_CP007627.1_1422280_1423120_+	cd00223, TOPRIM_TopoIIB_SPO, TOPRIM_TopoIIB_SPO: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in the type IIB family of DNA topoisomerases and Spo11	NA|296aa|up_1|NZ_CP007627.1_1423134_1424022_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|104aa|up_0|NZ_CP007627.1_1424030_1424342_-	pfam01527, HTH_Tnp_1, Transposase	cas2|116aa|down_0|NZ_CP007627.1_1427225_1427573_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|299aa|down_1|NZ_CP007627.1_1427565_1428462_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1355aa|down_2|NZ_CP007627.1_1428770_1432835_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|230aa|down_3|NZ_CP007627.1_1433496_1434186_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|487aa|down_4|NZ_CP007627.1_1441823_1443284_-	NA	NA|436aa|down_5|NZ_CP007627.1_1443280_1444588_-	cd07324, M48C_Oma1-like, Oma1 peptidase-like, integral membrane metallopeptidase	NA|90aa|down_6|NZ_CP007627.1_1444751_1445021_-	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|109aa|down_7|NZ_CP007627.1_1445053_1445380_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|664aa|down_8|NZ_CP007627.1_1445559_1447551_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|134aa|down_9|NZ_CP007627.1_1447547_1447949_-	NA
