assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000739435.1_ASM73943v1	NZ_CP009159	Actinobacillus suis ATCC 33415 chromosome, complete genome	1	484337-484409	1	CRISPRCasFinder	no		DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	Orphan	CGCCCCACGTAAAAAACTAAAAG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	NA,NA	NA|219aa|up_9|NZ_CP009159.1_474953_475610_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|263aa|up_8|NZ_CP009159.1_475694_476483_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|106aa|up_7|NZ_CP009159.1_476542_476860_-	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA	NA|314aa|up_6|NZ_CP009159.1_477024_477966_+	PRK06860, PRK06860, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|296aa|up_5|NZ_CP009159.1_478129_479017_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|513aa|up_4|NZ_CP009159.1_479113_480652_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|286aa|up_3|NZ_CP009159.1_480791_481649_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|276aa|up_2|NZ_CP009159.1_482258_483086_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|150aa|up_1|NZ_CP009159.1_483082_483532_-	COG3762, COG3762, Predicted membrane protein [Function unknown]	NA|195aa|up_0|NZ_CP009159.1_483598_484183_-	pfam04011, LemA, LemA family	NA|554aa|down_0|NZ_CP009159.1_484962_486624_-	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|316aa|down_1|NZ_CP009159.1_486697_487645_-	PRK09513, fruK, 1-phosphofructokinase; Provisional	NA|635aa|down_2|NZ_CP009159.1_487659_489564_-	PRK13779, PRK13779, bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional	NA|762aa|down_3|NZ_CP009159.1_489822_492108_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|661aa|down_4|NZ_CP009159.1_492111_494094_+	PRK03705, PRK03705, glycogen debranching protein GlgX	NA|437aa|down_5|NZ_CP009159.1_494130_495441_+	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|479aa|down_6|NZ_CP009159.1_495535_496972_+	PRK00654, glgA, glycogen synthase GlgA	NA|834aa|down_7|NZ_CP009159.1_497161_499663_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|139aa|down_8|NZ_CP009159.1_499771_500188_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|686aa|down_9|NZ_CP009159.1_500242_502300_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed
GCF_000739435.1_ASM73943v1	NZ_CP009159	Actinobacillus suis ATCC 33415 chromosome, complete genome	2	559621-560646	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	 Type II-B,Type II-A,Type II-C,Type II-B, or Type II-C?	ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC,ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC,ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	36,36,36	1	1	560053-560082	NZ_CP009159.1_823058-823029	NA:NA:NA	15,15,11	15	TypeII-B,TypeII-A,TypeII-C,TypeII-B,orTypeII-C?	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	NA,NA|292aa|down_8|NZ_CP009159.1_569048_569924_+	NA|253aa|up_9|NZ_CP009159.1_547701_548460_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|277aa|up_8|NZ_CP009159.1_548520_549351_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|346aa|up_7|NZ_CP009159.1_549428_550466_-	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|444aa|up_6|NZ_CP009159.1_550711_552043_+	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|154aa|up_5|NZ_CP009159.1_552165_552627_+	PRK00203, rnhA, ribonuclease H; Reviewed	NA|168aa|up_4|NZ_CP009159.1_552783_553287_+	PRK10845, PRK10845, colicin V production protein; Provisional	NA|506aa|up_3|NZ_CP009159.1_553300_554818_+	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	cas9|1055aa|up_2|NZ_CP009159.1_555101_558266_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|306aa|up_1|NZ_CP009159.1_558320_559238_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|109aa|up_0|NZ_CP009159.1_559230_559557_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|152aa|down_0|NZ_CP009159.1_560704_561160_-	pfam17311, DUF5358, Family of unknown function (DUF5358)	NA|447aa|down_1|NZ_CP009159.1_561259_562600_-	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase	NA|116aa|down_2|NZ_CP009159.1_562931_563279_-	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane]	NA|334aa|down_3|NZ_CP009159.1_563349_564351_-	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated	NA|130aa|down_4|NZ_CP009159.1_564442_564832_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|246aa|down_5|NZ_CP009159.1_564859_565597_+	PRK10723, PRK10723, polyphenol oxidase	NA|406aa|down_6|NZ_CP009159.1_565966_567184_+	PRK09692, PRK09692, integrase; Provisional	NA|443aa|down_7|NZ_CP009159.1_567526_568855_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|292aa|down_8|NZ_CP009159.1_569048_569924_+	NA	NA|72aa|down_9|NZ_CP009159.1_570092_570308_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]
GCF_000739435.1_ASM73943v1	NZ_CP009159	Actinobacillus suis ATCC 33415 chromosome, complete genome	3	987490-987587	3	CRISPRCasFinder	no		DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	Orphan	CCTAACTTCCAATATGGAAGTCAGGGATAAAAATG	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	NA|112aa|up_6|NZ_CP009159.1_978518_978854_+,NA	NA|871aa|up_9|NZ_CP009159.1_972601_975214_-	COG3587, COG3587, Restriction endonuclease [Defense mechanisms]	NA|616aa|up_8|NZ_CP009159.1_975353_977201_-	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|321aa|up_7|NZ_CP009159.1_977410_978373_+	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA|112aa|up_6|NZ_CP009159.1_978518_978854_+	NA	NA|366aa|up_5|NZ_CP009159.1_978918_980016_-	PRK11162, mltA, murein transglycosylase A; Provisional	NA|518aa|up_4|NZ_CP009159.1_980329_981883_+	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|277aa|up_3|NZ_CP009159.1_982284_983115_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|452aa|up_2|NZ_CP009159.1_983118_984474_+	TIGR00665, DnaB, replicative DNA helicase	NA|564aa|up_1|NZ_CP009159.1_984486_986178_+	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|184aa|up_0|NZ_CP009159.1_986174_986726_+	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|253aa|down_0|NZ_CP009159.1_988225_988984_+	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family	NA|156aa|down_1|NZ_CP009159.1_988999_989467_+	pfam11358, DUF3158, Protein of unknown function (DUF3158)	NA|145aa|down_2|NZ_CP009159.1_989769_990204_+	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional	NA|133aa|down_3|NZ_CP009159.1_991819_992218_-	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators	NA|205aa|down_4|NZ_CP009159.1_992288_992903_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|130aa|down_5|NZ_CP009159.1_993784_994174_-	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators	NA|254aa|down_6|NZ_CP009159.1_994581_995343_+	pfam03713, DUF305, Domain of unknown function (DUF305)	NA|692aa|down_7|NZ_CP009159.1_995767_997843_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|59aa|down_8|NZ_CP009159.1_998284_998461_+	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|516aa|down_9|NZ_CP009159.1_998550_1000098_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]
