assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000750195.1_ASM75019v1	NZ_CP009239	Cellulophaga lytica strain HI1, complete genome	1	140058-140427	1,1	CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,WYL,PrimPol	Orphan	AGTATCTGGTTCTGCAGATATTAA,TCTGGNTCTGGAGANATN	24,18	0	0	NA	NA	NA:NA	5,6	6	Orphan	csa3,DEDDh,cas3,WYL,PrimPol	NA|111aa|up_9|NZ_CP009239.1_129563_129896_-,NA|183aa|up_1|NZ_CP009239.1_138096_138645_+,NA|359aa|up_0|NZ_CP009239.1_138625_139702_+,NA|178aa|down_2|NZ_CP009239.1_142898_143432_+	NA|111aa|up_9|NZ_CP009239.1_129563_129896_-	NA	NA|309aa|up_8|NZ_CP009239.1_129902_130829_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|180aa|up_7|NZ_CP009239.1_130839_131379_-	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|611aa|up_6|NZ_CP009239.1_131589_133422_-	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed	NA|127aa|up_5|NZ_CP009239.1_133694_134075_+	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|231aa|up_4|NZ_CP009239.1_134132_134825_-	PRK00023, cmk, (d)CMP kinase	NA|815aa|up_3|NZ_CP009239.1_134879_137324_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|186aa|up_2|NZ_CP009239.1_137542_138100_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|183aa|up_1|NZ_CP009239.1_138096_138645_+	NA	NA|359aa|up_0|NZ_CP009239.1_138625_139702_+	NA	NA|440aa|down_0|NZ_CP009239.1_140512_141832_-	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily	NA|270aa|down_1|NZ_CP009239.1_141916_142726_-	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|178aa|down_2|NZ_CP009239.1_142898_143432_+	NA	NA|163aa|down_3|NZ_CP009239.1_143556_144045_+	pfam01641, SelR, SelR domain	NA|137aa|down_4|NZ_CP009239.1_144044_144455_+	pfam01641, SelR, SelR domain	NA|176aa|down_5|NZ_CP009239.1_144457_144985_+	pfam07609, DUF1572, Protein of unknown function (DUF1572)	NA|301aa|down_6|NZ_CP009239.1_144988_145891_-	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|464aa|down_7|NZ_CP009239.1_146047_147439_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|97aa|down_8|NZ_CP009239.1_147523_147814_+	pfam12823, DUF3817, Domain of unknown function (DUF3817)	NA|243aa|down_9|NZ_CP009239.1_147821_148550_-	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily
GCF_000750195.1_ASM75019v1	NZ_CP009239	Cellulophaga lytica strain HI1, complete genome	2	629913-629990	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,PrimPol	Orphan	GATGTTGATGCTAATGAAACTGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,PrimPol	NA|167aa|up_8|NZ_CP009239.1_616058_616559_-,NA|918aa|up_1|NZ_CP009239.1_621359_624113_+,NA|307aa|down_0|NZ_CP009239.1_632235_633156_+	NA|770aa|up_9|NZ_CP009239.1_613689_615999_-	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|167aa|up_8|NZ_CP009239.1_616058_616559_-	NA	NA|253aa|up_7|NZ_CP009239.1_616642_617401_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|246aa|up_6|NZ_CP009239.1_617400_618138_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|240aa|up_5|NZ_CP009239.1_618145_618865_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|256aa|up_4|NZ_CP009239.1_618881_619649_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|246aa|up_3|NZ_CP009239.1_619652_620390_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|231aa|up_2|NZ_CP009239.1_620537_621230_+	PRK05282, PRK05282, dipeptidase PepE	NA|918aa|up_1|NZ_CP009239.1_621359_624113_+	NA	NA|386aa|up_0|NZ_CP009239.1_624114_625272_+	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|307aa|down_0|NZ_CP009239.1_632235_633156_+	NA	NA|385aa|down_1|NZ_CP009239.1_633158_634313_+	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|152aa|down_2|NZ_CP009239.1_634344_634800_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|249aa|down_3|NZ_CP009239.1_634805_635552_+	cd14847, DD-carboxypeptidase_like, Uncharacterized proteins of the MEROPS peptidase family M15, subfamily B	NA|256aa|down_4|NZ_CP009239.1_635596_636364_+	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein	NA|142aa|down_5|NZ_CP009239.1_636757_637183_-	sd00045, ANK, ankyrin repeats	NA|506aa|down_6|NZ_CP009239.1_637422_638940_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|269aa|down_7|NZ_CP009239.1_638993_639800_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|264aa|down_8|NZ_CP009239.1_639823_640615_+	pfam12412, DUF3667, Protein of unknown function (DUF3667)	NA|255aa|down_9|NZ_CP009239.1_640694_641459_+	pfam08241, Methyltransf_11, Methyltransferase domain
GCF_000750195.1_ASM75019v1	NZ_CP009239	Cellulophaga lytica strain HI1, complete genome	3	630288-630365	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,PrimPol	Orphan	GATGTTGATGCTAATGAAACTGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,PrimPol	NA|167aa|up_8|NZ_CP009239.1_616058_616559_-,NA|918aa|up_1|NZ_CP009239.1_621359_624113_+,NA|307aa|down_0|NZ_CP009239.1_632235_633156_+	NA|770aa|up_9|NZ_CP009239.1_613689_615999_-	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|167aa|up_8|NZ_CP009239.1_616058_616559_-	NA	NA|253aa|up_7|NZ_CP009239.1_616642_617401_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|246aa|up_6|NZ_CP009239.1_617400_618138_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|240aa|up_5|NZ_CP009239.1_618145_618865_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|256aa|up_4|NZ_CP009239.1_618881_619649_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|246aa|up_3|NZ_CP009239.1_619652_620390_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|231aa|up_2|NZ_CP009239.1_620537_621230_+	PRK05282, PRK05282, dipeptidase PepE	NA|918aa|up_1|NZ_CP009239.1_621359_624113_+	NA	NA|386aa|up_0|NZ_CP009239.1_624114_625272_+	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|307aa|down_0|NZ_CP009239.1_632235_633156_+	NA	NA|385aa|down_1|NZ_CP009239.1_633158_634313_+	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|152aa|down_2|NZ_CP009239.1_634344_634800_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|249aa|down_3|NZ_CP009239.1_634805_635552_+	cd14847, DD-carboxypeptidase_like, Uncharacterized proteins of the MEROPS peptidase family M15, subfamily B	NA|256aa|down_4|NZ_CP009239.1_635596_636364_+	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein	NA|142aa|down_5|NZ_CP009239.1_636757_637183_-	sd00045, ANK, ankyrin repeats	NA|506aa|down_6|NZ_CP009239.1_637422_638940_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|269aa|down_7|NZ_CP009239.1_638993_639800_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|264aa|down_8|NZ_CP009239.1_639823_640615_+	pfam12412, DUF3667, Protein of unknown function (DUF3667)	NA|255aa|down_9|NZ_CP009239.1_640694_641459_+	pfam08241, Methyltransf_11, Methyltransferase domain
GCF_000750195.1_ASM75019v1	NZ_CP009239	Cellulophaga lytica strain HI1, complete genome	4	630687-630769	4	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,PrimPol	Orphan	GATGTTGATGCTAATGAAACTGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,PrimPol	NA|167aa|up_8|NZ_CP009239.1_616058_616559_-,NA|918aa|up_1|NZ_CP009239.1_621359_624113_+,NA|307aa|down_0|NZ_CP009239.1_632235_633156_+	NA|770aa|up_9|NZ_CP009239.1_613689_615999_-	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|167aa|up_8|NZ_CP009239.1_616058_616559_-	NA	NA|253aa|up_7|NZ_CP009239.1_616642_617401_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|246aa|up_6|NZ_CP009239.1_617400_618138_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|240aa|up_5|NZ_CP009239.1_618145_618865_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|256aa|up_4|NZ_CP009239.1_618881_619649_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|246aa|up_3|NZ_CP009239.1_619652_620390_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|231aa|up_2|NZ_CP009239.1_620537_621230_+	PRK05282, PRK05282, dipeptidase PepE	NA|918aa|up_1|NZ_CP009239.1_621359_624113_+	NA	NA|386aa|up_0|NZ_CP009239.1_624114_625272_+	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|307aa|down_0|NZ_CP009239.1_632235_633156_+	NA	NA|385aa|down_1|NZ_CP009239.1_633158_634313_+	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|152aa|down_2|NZ_CP009239.1_634344_634800_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|249aa|down_3|NZ_CP009239.1_634805_635552_+	cd14847, DD-carboxypeptidase_like, Uncharacterized proteins of the MEROPS peptidase family M15, subfamily B	NA|256aa|down_4|NZ_CP009239.1_635596_636364_+	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein	NA|142aa|down_5|NZ_CP009239.1_636757_637183_-	sd00045, ANK, ankyrin repeats	NA|506aa|down_6|NZ_CP009239.1_637422_638940_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|269aa|down_7|NZ_CP009239.1_638993_639800_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|264aa|down_8|NZ_CP009239.1_639823_640615_+	pfam12412, DUF3667, Protein of unknown function (DUF3667)	NA|255aa|down_9|NZ_CP009239.1_640694_641459_+	pfam08241, Methyltransf_11, Methyltransferase domain
GCF_000750195.1_ASM75019v1	NZ_CP009239	Cellulophaga lytica strain HI1, complete genome	5	2638876-2639079	5	CRISPRCasFinder	no	cas3	csa3,DEDDh,cas3,WYL,PrimPol	Unclear	GTTGGTAAATCTGGTTGGTGAATAAA	26	0	0	NA	NA	NA	2	2	Unclear	csa3,DEDDh,cas3,WYL,PrimPol	NA|86aa|up_9|NZ_CP009239.1_2622224_2622482_+,NA|339aa|up_7|NZ_CP009239.1_2624360_2625377_-,NA|126aa|up_6|NZ_CP009239.1_2625366_2625744_-,NA|51aa|down_7|NZ_CP009239.1_2652742_2652895_-	NA|86aa|up_9|NZ_CP009239.1_2622224_2622482_+	NA	NA|109aa|up_8|NZ_CP009239.1_2623086_2623413_+	pfam07411, DUF1508, Domain of unknown function (DUF1508)	NA|339aa|up_7|NZ_CP009239.1_2624360_2625377_-	NA	NA|126aa|up_6|NZ_CP009239.1_2625366_2625744_-	NA	NA|146aa|up_5|NZ_CP009239.1_2625754_2626192_-	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|810aa|up_4|NZ_CP009239.1_2626172_2628602_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|284aa|up_3|NZ_CP009239.1_2628603_2629455_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|91aa|up_2|NZ_CP009239.1_2629609_2629882_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|946aa|up_1|NZ_CP009239.1_2629900_2632738_+	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|1587aa|up_0|NZ_CP009239.1_2632744_2637505_+	TIGR02987, m6_adenine_and_m5_cytosine_DNA_methyltransferase, type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family	cas3|2102aa|down_0|NZ_CP009239.1_2639324_2645630_+	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins	NA|693aa|down_1|NZ_CP009239.1_2645631_2647710_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|228aa|down_2|NZ_CP009239.1_2647790_2648474_-	PRK08116, PRK08116, hypothetical protein; Validated	NA|91aa|down_3|NZ_CP009239.1_2649177_2649450_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|292aa|down_4|NZ_CP009239.1_2649630_2650506_-	pfam09357, RteC, RteC protein	NA|424aa|down_5|NZ_CP009239.1_2650573_2651845_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|171aa|down_6|NZ_CP009239.1_2652233_2652746_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|51aa|down_7|NZ_CP009239.1_2652742_2652895_-	NA	NA|312aa|down_8|NZ_CP009239.1_2653470_2654406_+	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|337aa|down_9|NZ_CP009239.1_2654493_2655504_-	PLN02284, PLN02284, glutamine synthetase
GCF_000750195.1_ASM75019v1	NZ_CP009239	Cellulophaga lytica strain HI1, complete genome	6	2639189-2639292	6	CRISPRCasFinder	no	cas3	csa3,DEDDh,cas3,WYL,PrimPol	Unclear	GTTGGTAAATCTGGTTGGTGAATAAA	26	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,cas3,WYL,PrimPol	NA|339aa|up_8|NZ_CP009239.1_2624360_2625377_-,NA|126aa|up_7|NZ_CP009239.1_2625366_2625744_-,NA|51aa|down_7|NZ_CP009239.1_2652742_2652895_-	NA|109aa|up_9|NZ_CP009239.1_2623086_2623413_+	pfam07411, DUF1508, Domain of unknown function (DUF1508)	NA|339aa|up_8|NZ_CP009239.1_2624360_2625377_-	NA	NA|126aa|up_7|NZ_CP009239.1_2625366_2625744_-	NA	NA|146aa|up_6|NZ_CP009239.1_2625754_2626192_-	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|810aa|up_5|NZ_CP009239.1_2626172_2628602_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|284aa|up_4|NZ_CP009239.1_2628603_2629455_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|91aa|up_3|NZ_CP009239.1_2629609_2629882_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|946aa|up_2|NZ_CP009239.1_2629900_2632738_+	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|1587aa|up_1|NZ_CP009239.1_2632744_2637505_+	TIGR02987, m6_adenine_and_m5_cytosine_DNA_methyltransferase, type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family	NA|465aa|up_0|NZ_CP009239.1_2637501_2638896_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	cas3|2102aa|down_0|NZ_CP009239.1_2639324_2645630_+	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins	NA|693aa|down_1|NZ_CP009239.1_2645631_2647710_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|228aa|down_2|NZ_CP009239.1_2647790_2648474_-	PRK08116, PRK08116, hypothetical protein; Validated	NA|91aa|down_3|NZ_CP009239.1_2649177_2649450_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|292aa|down_4|NZ_CP009239.1_2649630_2650506_-	pfam09357, RteC, RteC protein	NA|424aa|down_5|NZ_CP009239.1_2650573_2651845_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|171aa|down_6|NZ_CP009239.1_2652233_2652746_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|51aa|down_7|NZ_CP009239.1_2652742_2652895_-	NA	NA|312aa|down_8|NZ_CP009239.1_2653470_2654406_+	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|337aa|down_9|NZ_CP009239.1_2654493_2655504_-	PLN02284, PLN02284, glutamine synthetase
