assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000756505.1_ASM75650v1	NZ_CP006828	Ornithobacterium rhinotracheale ORT-UMN 88 chromosome, complete genome	1	1165000-1165114	1	CRISPRCasFinder	no		cas3,WYL,DEDDh,RT,cas2,cas1,cas9	Orphan	AAGCAGGTCCAAAAGAAAACAACGGATG	28	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,RT,cas2,cas1,cas9	NA|118aa|up_8|NZ_CP006828.1_1157775_1158129_-,NA|144aa|up_7|NZ_CP006828.1_1158318_1158750_-,NA|312aa|up_3|NZ_CP006828.1_1160735_1161671_-,NA|73aa|up_2|NZ_CP006828.1_1161702_1161921_+,NA	NA|521aa|up_9|NZ_CP006828.1_1156155_1157718_+	pfam10150, RNase_E_G, Ribonuclease E/G family	NA|118aa|up_8|NZ_CP006828.1_1157775_1158129_-	NA	NA|144aa|up_7|NZ_CP006828.1_1158318_1158750_-	NA	NA|229aa|up_6|NZ_CP006828.1_1158811_1159498_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|152aa|up_5|NZ_CP006828.1_1159542_1159998_+	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|260aa|up_4|NZ_CP006828.1_1159976_1160756_+	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|312aa|up_3|NZ_CP006828.1_1160735_1161671_-	NA	NA|73aa|up_2|NZ_CP006828.1_1161702_1161921_+	NA	NA|542aa|up_1|NZ_CP006828.1_1162029_1163655_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|151aa|up_0|NZ_CP006828.1_1163721_1164174_+	pfam01668, SmpB, SmpB protein	NA|591aa|down_0|NZ_CP006828.1_1165731_1167504_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|381aa|down_1|NZ_CP006828.1_1167608_1168751_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|202aa|down_2|NZ_CP006828.1_1168872_1169478_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|324aa|down_3|NZ_CP006828.1_1169663_1170635_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|303aa|down_4|NZ_CP006828.1_1170637_1171546_-	cd13961, PT_UbiA_DGGGPS, Geranylgeranylglycerol-phosphate geranylgeranyltransferase	NA|304aa|down_5|NZ_CP006828.1_1171558_1172470_-	COG1577, ERG12, Mevalonate kinase [Lipid metabolism]	NA|286aa|down_6|NZ_CP006828.1_1172536_1173394_-	PRK08507, PRK08507, prephenate dehydrogenase; Validated	NA|125aa|down_7|NZ_CP006828.1_1173390_1173765_-	pfam14129, DUF4296, Domain of unknown function (DUF4296)	NA|241aa|down_8|NZ_CP006828.1_1173764_1174487_-	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1	NA|214aa|down_9|NZ_CP006828.1_1174550_1175192_+	pfam14093, DUF4271, Domain of unknown function (DUF4271)
GCF_000756505.1_ASM75650v1	NZ_CP006828	Ornithobacterium rhinotracheale ORT-UMN 88 chromosome, complete genome	2	2220041-2221391	1,2,2	PILER-CR,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas9	cas3,WYL,DEDDh,RT,cas2,cas1,cas9	Type II-C, or Type II-C?,Type II-A, Type II-B,Type II-B	GTTGTGATTTGCTTTCAAGTTCTTATTTTTGTGTGAGTAATCACAAG,GTTGTGATTTGCTTTCAAGTTCTTATTTTTGTGTGAGTAATCACAAG,GTTGTGATTTGCTTTCAAGTTCTTATTTTTGTGTGAGTAATCACAAG	47,47,47	0	0	NA	NA	NA:NA:NA	17,17,17	17	TypeII-C,orTypeII-C?,TypeII-A,TypeII-B,TypeII-B	cas3,WYL,DEDDh,RT,cas2,cas1,cas9	NA,NA|82aa|down_8|NZ_CP006828.1_2231166_2231412_+,NA|388aa|down_9|NZ_CP006828.1_2231470_2232634_+	NA|409aa|up_9|NZ_CP006828.1_2209969_2211196_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|230aa|up_8|NZ_CP006828.1_2211195_2211885_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|450aa|up_7|NZ_CP006828.1_2211916_2213266_-	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like	NA|149aa|up_6|NZ_CP006828.1_2213281_2213728_-	cd14797, DUF302, Uncharacterized domain family DUF302	NA|676aa|up_5|NZ_CP006828.1_2213732_2215760_-	TIGR04131, conserved_hypothetical_protein, gliding motility-associated C-terminal domain	NA|264aa|up_4|NZ_CP006828.1_2215876_2216668_+	cd14847, DD-carboxypeptidase_like, Uncharacterized proteins of the MEROPS peptidase family M15, subfamily B	NA|259aa|up_3|NZ_CP006828.1_2216690_2217467_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|218aa|up_2|NZ_CP006828.1_2217463_2218117_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|220aa|up_1|NZ_CP006828.1_2218341_2219001_+	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|295aa|up_0|NZ_CP006828.1_2219023_2219908_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	cas2|115aa|down_0|NZ_CP006828.1_2221499_2221844_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|299aa|down_1|NZ_CP006828.1_2221848_2222745_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1536aa|down_2|NZ_CP006828.1_2222744_2227352_-	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	NA|490aa|down_3|NZ_CP006828.1_2227546_2229016_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|114aa|down_4|NZ_CP006828.1_2229222_2229564_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|101aa|down_5|NZ_CP006828.1_2229575_2229878_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|149aa|down_6|NZ_CP006828.1_2229897_2230344_+	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|202aa|down_7|NZ_CP006828.1_2230428_2231034_-	pfam01713, Smr, Smr domain	NA|82aa|down_8|NZ_CP006828.1_2231166_2231412_+	NA	NA|388aa|down_9|NZ_CP006828.1_2231470_2232634_+	NA
