assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000764615.1_ASM76461v1	NZ_CP008929	Klebsiella pneumoniae strain PMK1 chromosome, complete genome	1	2763588-2763716	1	CRISPRCasFinder	no	DEDDh	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Unclear	GTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	39	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,csf2gr7,c2c9_V-U4	NA,NA	NA|194aa|up_9|NZ_CP008929.1_2754942_2755524_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|256aa|up_8|NZ_CP008929.1_2755598_2756366_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_7|NZ_CP008929.1_2756336_2757077_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|448aa|up_6|NZ_CP008929.1_2757488_2758832_+	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|413aa|up_5|NZ_CP008929.1_2758835_2760074_+	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|265aa|up_4|NZ_CP008929.1_2760066_2760861_+	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|213aa|up_3|NZ_CP008929.1_2760853_2761492_+	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|199aa|up_2|NZ_CP008929.1_2761498_2762095_+	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|408aa|up_1|NZ_CP008929.1_2762107_2763331_+	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|72aa|up_0|NZ_CP008929.1_2763333_2763549_+	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|287aa|down_0|NZ_CP008929.1_2763771_2764632_-	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|352aa|down_1|NZ_CP008929.1_2764791_2765847_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|151aa|down_2|NZ_CP008929.1_2765849_2766302_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|486aa|down_3|NZ_CP008929.1_2766344_2767802_-	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|153aa|down_4|NZ_CP008929.1_2768059_2768518_+	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|415aa|down_5|NZ_CP008929.1_2768623_2769868_+	PRK05077, frsA, esterase FrsA	NA|133aa|down_6|NZ_CP008929.1_2769925_2770324_+	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|231aa|down_7|NZ_CP008929.1_2770409_2771102_-	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|467aa|down_8|NZ_CP008929.1_2771147_2772548_-	PRK10197, PRK10197, GABA permease	NA|428aa|down_9|NZ_CP008929.1_2772683_2773967_-	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase
GCF_000764615.1_ASM76461v1	NZ_CP008929	Klebsiella pneumoniae strain PMK1 chromosome, complete genome	2	3189542-3189700	1	PILER-CR	no		cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Orphan	GTAGGCCGGGCAAGCGCAGCGCCGCCCGGCAAAGAGTGCAGG	42	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,csf2gr7,c2c9_V-U4	NA,NA	NA|312aa|up_9|NZ_CP008929.1_3175419_3176355_+	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|208aa|up_8|NZ_CP008929.1_3176406_3177030_-	PRK10251, PRK10251, enterobactin synthase subunit EntD	NA|743aa|up_7|NZ_CP008929.1_3177096_3179325_-	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor	NA|403aa|up_6|NZ_CP008929.1_3179584_3180793_+	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional	NA|68aa|up_5|NZ_CP008929.1_3180820_3181024_+	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1294aa|up_4|NZ_CP008929.1_3181034_3184916_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|265aa|up_3|NZ_CP008929.1_3184980_3185775_-	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein	NA|331aa|up_2|NZ_CP008929.1_3185771_3186764_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|336aa|up_1|NZ_CP008929.1_3186760_3187768_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|414aa|up_0|NZ_CP008929.1_3187880_3189122_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|320aa|down_0|NZ_CP008929.1_3189731_3190691_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|392aa|down_1|NZ_CP008929.1_3190879_3192055_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|536aa|down_2|NZ_CP008929.1_3192064_3193672_+	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|284aa|down_3|NZ_CP008929.1_3193685_3194537_+	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|249aa|down_4|NZ_CP008929.1_3194545_3195292_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|138aa|down_5|NZ_CP008929.1_3195292_3195706_+	PRK10254, PRK10254, proofreading thioesterase EntH	NA|702aa|down_6|NZ_CP008929.1_3196062_3198168_+	PRK15015, PRK15015, carbon starvation protein CstA	NA|66aa|down_7|NZ_CP008929.1_3198272_3198470_+	COG2879, COG2879, Uncharacterized small protein [Function unknown]	NA|101aa|down_8|NZ_CP008929.1_3198845_3199148_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|248aa|down_9|NZ_CP008929.1_3199331_3200075_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
GCF_000764615.1_ASM76461v1	NZ_CP008929	Klebsiella pneumoniae strain PMK1 chromosome, complete genome	3	4766150-4766857	2,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Type I-E	AGAAACACCCCCACGTGCGTGGGGAAGAC,AGAAACACCCCCACGTGCGTGGGGAAGACN,GAAACACCCCCACGTGCGTGGGGAAGAC	29,30,28	2	4	4766248-4766279|4766248-4766279|4766248-4766280|4766248-4766280	NZ_CP008930.1_151134-151103|NZ_CP008932.1_31255-31224|NZ_CP008930.1_151134-151102|NZ_CP008932.1_31255-31223	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	11,11,10	11	TypeI-E	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,csf2gr7,c2c9_V-U4	NA,NA	NA|77aa|up_9|NZ_CP008929.1_4756900_4757131_-	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]	NA|246aa|up_8|NZ_CP008929.1_4757127_4757865_-	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|220aa|up_7|NZ_CP008929.1_4757914_4758574_-	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|208aa|up_6|NZ_CP008929.1_4758570_4759194_-	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|447aa|up_5|NZ_CP008929.1_4759277_4760618_-	pfam00034, Cytochrom_C, Cytochrome c	NA|595aa|up_4|NZ_CP008929.1_4760628_4762413_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|252aa|up_3|NZ_CP008929.1_4762415_4763171_-	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|124aa|up_2|NZ_CP008929.1_4763672_4764044_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|228aa|up_1|NZ_CP008929.1_4764104_4764788_-	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|372aa|up_0|NZ_CP008929.1_4764798_4765914_-	PHA02053, PHA02053, hypothetical protein	cas2|96aa|down_0|NZ_CP008929.1_4766904_4767192_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|292aa|down_1|NZ_CP008929.1_4767169_4768045_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|239aa|down_2|NZ_CP008929.1_4768044_4768761_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|down_3|NZ_CP008929.1_4768773_4769808_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|216aa|down_4|NZ_CP008929.1_4769837_4770485_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cse2gr11|189aa|down_5|NZ_CP008929.1_4770477_4771044_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|508aa|down_6|NZ_CP008929.1_4771055_4772579_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|872aa|down_7|NZ_CP008929.1_4772582_4775198_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|357aa|down_8|NZ_CP008929.1_4776257_4777328_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|590aa|down_9|NZ_CP008929.1_4777320_4779090_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]
GCF_000764615.1_ASM76461v1	NZ_CP008929	Klebsiella pneumoniae strain PMK1 chromosome, complete genome	4	4775610-4776005	3,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Type I-E	AGAAACACCCCCACGCGTGTGGGGAAGAC,GAAACACCCCCACGCGTGTGGGGAAGAC,AGAAACACCCCCACGCGTGTGGGGAAGAC	29,28,29	2	4	4775700-4775731|4775700-4775731|4775700-4775732|4775700-4775732	NZ_CP008930.1_84923-84954|NZ_CP008932.1_1253-1284|NZ_CP008930.1_84923-84955|NZ_CP008932.1_1253-1285	I-E,II-B:I-E,II-B:I-E,II-B	6,6,3	6	TypeI-E	cas3,csa3,RT,WYL,DEDDh,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,csf2gr7,c2c9_V-U4	NA,NA	NA|228aa|up_9|NZ_CP008929.1_4764104_4764788_-	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|372aa|up_8|NZ_CP008929.1_4764798_4765914_-	PHA02053, PHA02053, hypothetical protein	cas2|96aa|up_7|NZ_CP008929.1_4766904_4767192_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|292aa|up_6|NZ_CP008929.1_4767169_4768045_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|239aa|up_5|NZ_CP008929.1_4768044_4768761_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|up_4|NZ_CP008929.1_4768773_4769808_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|216aa|up_3|NZ_CP008929.1_4769837_4770485_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cse2gr11|189aa|up_2|NZ_CP008929.1_4770477_4771044_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|508aa|up_1|NZ_CP008929.1_4771055_4772579_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|872aa|up_0|NZ_CP008929.1_4772582_4775198_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|357aa|down_0|NZ_CP008929.1_4776257_4777328_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|590aa|down_1|NZ_CP008929.1_4777320_4779090_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|363aa|down_2|NZ_CP008929.1_4779163_4780252_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|360aa|down_3|NZ_CP008929.1_4780554_4781634_+	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|717aa|down_4|NZ_CP008929.1_4781880_4784031_+	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|54aa|down_5|NZ_CP008929.1_4784073_4784235_-	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|400aa|down_6|NZ_CP008929.1_4785526_4786726_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|145aa|down_7|NZ_CP008929.1_4786841_4787276_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|411aa|down_8|NZ_CP008929.1_4787841_4789074_+	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|131aa|down_9|NZ_CP008929.1_4789110_4789503_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family
