assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	1	476229-476307	1	CRISPRCasFinder	no	DEDDh	csa3,DEDDh,DinG,cas3,WYL	Unclear	CGGGGCCCCAACATAGAGAATTT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|31aa|up_6|NZ_CP009681.1_470940_471033_+,NA|37aa|up_2|NZ_CP009681.1_474038_474149_+,NA|138aa|up_1|NZ_CP009681.1_474177_474591_+,NA|129aa|down_1|NZ_CP009681.1_477454_477841_+,NA|92aa|down_7|NZ_CP009681.1_481826_482102_-	NA|177aa|up_9|NZ_CP009681.1_468256_468787_+	pfam11667, DUF3267, Putative zincin peptidase	NA|357aa|up_8|NZ_CP009681.1_469033_470104_+	PRK02406, PRK02406, DNA polymerase IV; Validated	DEDDh|185aa|up_7|NZ_CP009681.1_470171_470726_-	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|31aa|up_6|NZ_CP009681.1_470940_471033_+	NA	NA|167aa|up_5|NZ_CP009681.1_471114_471615_-	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|438aa|up_4|NZ_CP009681.1_471906_473220_+	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|244aa|up_3|NZ_CP009681.1_473221_473953_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|37aa|up_2|NZ_CP009681.1_474038_474149_+	NA	NA|138aa|up_1|NZ_CP009681.1_474177_474591_+	NA	NA|329aa|up_0|NZ_CP009681.1_475021_476008_-	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|253aa|down_0|NZ_CP009681.1_476479_477238_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|129aa|down_1|NZ_CP009681.1_477454_477841_+	NA	NA|234aa|down_2|NZ_CP009681.1_477855_478557_+	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|228aa|down_3|NZ_CP009681.1_478553_479237_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|117aa|down_4|NZ_CP009681.1_479246_479597_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|210aa|down_5|NZ_CP009681.1_479586_480216_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|406aa|down_6|NZ_CP009681.1_480331_481549_-	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|92aa|down_7|NZ_CP009681.1_481826_482102_-	NA	NA|155aa|down_8|NZ_CP009681.1_482108_482573_-	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|391aa|down_9|NZ_CP009681.1_482846_484019_+	pfam00872, Transposase_mut, Transposase, Mutator family
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	2	1353477-1353562	2	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	5	1353507-1353532|1353507-1353532|1353507-1353532|1353507-1353532|1353507-1353532	NZ_CP009681.1_316601-316576|NZ_CP009681.1_1726607-1726582|NZ_CP009681.1_1763534-1763559|NZ_CP009681.1_1763478-1763503|NZ_CP009681.1_1763590-1763615	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|76aa|up_6|NZ_CP009681.1_1346274_1346502_-,NA|75aa|down_0|NZ_CP009681.1_1353801_1354026_-,NA|49aa|down_1|NZ_CP009681.1_1353982_1354129_-,NA|78aa|down_3|NZ_CP009681.1_1356237_1356471_+,NA|63aa|down_4|NZ_CP009681.1_1357092_1357281_+,NA|169aa|down_7|NZ_CP009681.1_1359362_1359869_-,NA|31aa|down_9|NZ_CP009681.1_1360901_1360994_+	NA|45aa|up_9|NZ_CP009681.1_1343540_1343675_-	pfam05480, Staph_haemo, Staphylococcus haemolytic protein	NA|63aa|up_8|NZ_CP009681.1_1344585_1344774_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|316aa|up_7|NZ_CP009681.1_1345022_1345970_+	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family	NA|76aa|up_6|NZ_CP009681.1_1346274_1346502_-	NA	NA|497aa|up_5|NZ_CP009681.1_1346809_1348300_-	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|311aa|up_4|NZ_CP009681.1_1348537_1349470_-	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|334aa|up_3|NZ_CP009681.1_1349492_1350494_-	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional	NA|242aa|up_2|NZ_CP009681.1_1350931_1351657_+	PRK13043, PRK13043, superantigen-like protein; Reviewed	NA|242aa|up_1|NZ_CP009681.1_1351751_1352477_+	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|239aa|up_0|NZ_CP009681.1_1352584_1353301_+	PRK13350, PRK13350, superantigen-like protein; Reviewed	NA|75aa|down_0|NZ_CP009681.1_1353801_1354026_-	NA	NA|49aa|down_1|NZ_CP009681.1_1353982_1354129_-	NA	NA|320aa|down_2|NZ_CP009681.1_1354801_1355761_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|78aa|down_3|NZ_CP009681.1_1356237_1356471_+	NA	NA|63aa|down_4|NZ_CP009681.1_1357092_1357281_+	NA	NA|117aa|down_5|NZ_CP009681.1_1358102_1358453_-	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|166aa|down_6|NZ_CP009681.1_1358606_1359104_-	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|169aa|down_7|NZ_CP009681.1_1359362_1359869_-	NA	NA|134aa|down_8|NZ_CP009681.1_1360540_1360942_+	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|31aa|down_9|NZ_CP009681.1_1360901_1360994_+	NA
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	3	1357487-1357739	3,1	CRISPRCasFinder,CRT	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTGCA,TTGGGGCCCCGCCAACTTGCA	27,21	3	3	1357571-1357599|1357571-1357605|1357684-1357718	NZ_CP009681.1_1357740-1357768|NZ_CP009681.1_1357740-1357774|NZ_CP009681.1_1357740-1357774	NA:NA	2,4	4	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|75aa|up_4|NZ_CP009681.1_1353801_1354026_-,NA|49aa|up_3|NZ_CP009681.1_1353982_1354129_-,NA|78aa|up_1|NZ_CP009681.1_1356237_1356471_+,NA|63aa|up_0|NZ_CP009681.1_1357092_1357281_+,NA|169aa|down_2|NZ_CP009681.1_1359362_1359869_-,NA|31aa|down_4|NZ_CP009681.1_1360901_1360994_+,NA|56aa|down_6|NZ_CP009681.1_1361833_1362001_-	NA|311aa|up_9|NZ_CP009681.1_1348537_1349470_-	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|334aa|up_8|NZ_CP009681.1_1349492_1350494_-	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional	NA|242aa|up_7|NZ_CP009681.1_1350931_1351657_+	PRK13043, PRK13043, superantigen-like protein; Reviewed	NA|242aa|up_6|NZ_CP009681.1_1351751_1352477_+	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|239aa|up_5|NZ_CP009681.1_1352584_1353301_+	PRK13350, PRK13350, superantigen-like protein; Reviewed	NA|75aa|up_4|NZ_CP009681.1_1353801_1354026_-	NA	NA|49aa|up_3|NZ_CP009681.1_1353982_1354129_-	NA	NA|320aa|up_2|NZ_CP009681.1_1354801_1355761_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|78aa|up_1|NZ_CP009681.1_1356237_1356471_+	NA	NA|63aa|up_0|NZ_CP009681.1_1357092_1357281_+	NA	NA|117aa|down_0|NZ_CP009681.1_1358102_1358453_-	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|166aa|down_1|NZ_CP009681.1_1358606_1359104_-	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|169aa|down_2|NZ_CP009681.1_1359362_1359869_-	NA	NA|134aa|down_3|NZ_CP009681.1_1360540_1360942_+	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|31aa|down_4|NZ_CP009681.1_1360901_1360994_+	NA	NA|110aa|down_5|NZ_CP009681.1_1361310_1361640_-	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|56aa|down_6|NZ_CP009681.1_1361833_1362001_-	NA	NA|168aa|down_7|NZ_CP009681.1_1362128_1362632_-	COG0622, COG0622, Predicted phosphoesterase [General function prediction only]	NA|196aa|down_8|NZ_CP009681.1_1362624_1363212_-	PRK14822, PRK14822, XTP/dITP diphosphatase	NA|267aa|down_9|NZ_CP009681.1_1363223_1364024_-	PRK00865, PRK00865, glutamate racemase; Provisional
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	4	1680623-1680704	4	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGG	24	1	2	1680647-1680680|1680647-1680680	NZ_CP009681.1_1050110-1050143|NZ_CP009681.1_1142740-1142707	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|52aa|up_9|NZ_CP009681.1_1672389_1672545_-,NA|38aa|down_1|NZ_CP009681.1_1681687_1681801_-	NA|52aa|up_9|NZ_CP009681.1_1672389_1672545_-	NA	NA|91aa|up_8|NZ_CP009681.1_1672556_1672829_-	pfam13545, HTH_Crp_2, Crp-like helix-turn-helix domain	NA|74aa|up_7|NZ_CP009681.1_1672829_1673051_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|191aa|up_6|NZ_CP009681.1_1673222_1673795_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|463aa|up_5|NZ_CP009681.1_1673821_1675210_+	pfam02037, SAP, SAP domain	NA|274aa|up_4|NZ_CP009681.1_1676588_1677410_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|232aa|up_3|NZ_CP009681.1_1677427_1678123_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_2|NZ_CP009681.1_1678115_1679141_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|99aa|up_1|NZ_CP009681.1_1679390_1679687_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|129aa|up_0|NZ_CP009681.1_1679679_1680066_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|293aa|down_0|NZ_CP009681.1_1680807_1681686_-	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|38aa|down_1|NZ_CP009681.1_1681687_1681801_-	NA	NA|127aa|down_2|NZ_CP009681.1_1681864_1682245_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|119aa|down_3|NZ_CP009681.1_1682402_1682759_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|107aa|down_4|NZ_CP009681.1_1682902_1683223_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|180aa|down_5|NZ_CP009681.1_1683372_1683912_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|239aa|down_6|NZ_CP009681.1_1683994_1684711_-	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|141aa|down_7|NZ_CP009681.1_1684858_1685281_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|165aa|down_8|NZ_CP009681.1_1685679_1686174_+	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|206aa|down_9|NZ_CP009681.1_1686328_1686946_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	5	1731955-1732035	5	CRISPRCasFinder	no	cas3	csa3,DEDDh,DinG,cas3,WYL	Unclear	AGTTGGCGGGGCCCCAACATAAAGAA	26	1	10	1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009|1731981-1732009	NZ_CP009681.1_636459-636431|NZ_CP009681.1_2211260-2211232|NZ_CP009681.1_2211315-2211287|NZ_CP009681.1_316708-316736|NZ_CP009681.1_465558-465586|NZ_CP009681.1_825132-825160|NZ_CP009681.1_1353624-1353596|NZ_CP009681.1_1597919-1597947|NZ_CP009681.1_1680610-1680638|NZ_CP009681.1_2735188-2735216	NA	1	1	Unclear	csa3,DEDDh,DinG,cas3,WYL	NA|86aa|up_5|NZ_CP009681.1_1726395_1726653_+,NA|36aa|down_4|NZ_CP009681.1_1739475_1739583_-,NA|35aa|down_6|NZ_CP009681.1_1741015_1741120_-	NA|301aa|up_9|NZ_CP009681.1_1720797_1721700_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|196aa|up_8|NZ_CP009681.1_1721942_1722530_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|332aa|up_7|NZ_CP009681.1_1724155_1725151_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|304aa|up_6|NZ_CP009681.1_1725147_1726059_-	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|86aa|up_5|NZ_CP009681.1_1726395_1726653_+	NA	NA|312aa|up_4|NZ_CP009681.1_1726998_1727934_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|480aa|up_3|NZ_CP009681.1_1728000_1729440_-	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|162aa|up_2|NZ_CP009681.1_1729447_1729933_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|280aa|up_1|NZ_CP009681.1_1729940_1730780_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|311aa|up_0|NZ_CP009681.1_1730785_1731718_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|949aa|down_0|NZ_CP009681.1_1732324_1735171_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|79aa|down_1|NZ_CP009681.1_1737431_1737668_-	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|217aa|down_2|NZ_CP009681.1_1737664_1738315_-	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|280aa|down_3|NZ_CP009681.1_1738488_1739328_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|36aa|down_4|NZ_CP009681.1_1739475_1739583_-	NA	NA|370aa|down_5|NZ_CP009681.1_1739736_1740847_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|35aa|down_6|NZ_CP009681.1_1741015_1741120_-	NA	NA|191aa|down_7|NZ_CP009681.1_1744107_1744680_-	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|225aa|down_8|NZ_CP009681.1_1744740_1745415_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	cas3|361aa|down_9|NZ_CP009681.1_1745407_1746490_-	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	6	1893246-1893338	6	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	TAGCATCCAACTGCGTTCCTCTTCATCTTTAG	32	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|239aa|up_5|NZ_CP009681.1_1888113_1888830_-,NA|169aa|up_4|NZ_CP009681.1_1888991_1889498_-,NA|36aa|down_3|NZ_CP009681.1_1896746_1896854_-	NA|75aa|up_9|NZ_CP009681.1_1884236_1884461_+	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|310aa|up_8|NZ_CP009681.1_1884655_1885585_+	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|125aa|up_7|NZ_CP009681.1_1886531_1886906_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|263aa|up_6|NZ_CP009681.1_1887156_1887945_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|239aa|up_5|NZ_CP009681.1_1888113_1888830_-	NA	NA|169aa|up_4|NZ_CP009681.1_1888991_1889498_-	NA	NA|267aa|up_3|NZ_CP009681.1_1889633_1890434_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|240aa|up_2|NZ_CP009681.1_1890417_1891137_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|317aa|up_1|NZ_CP009681.1_1891191_1892142_-	pfam01032, FecCD, FecCD transport family	NA|276aa|up_0|NZ_CP009681.1_1892289_1893117_-	cd01143, YvrC, Periplasmic binding protein YvrC	NA|212aa|down_0|NZ_CP009681.1_1893555_1894191_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|554aa|down_1|NZ_CP009681.1_1894579_1896241_-	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|128aa|down_2|NZ_CP009681.1_1896237_1896621_-	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|36aa|down_3|NZ_CP009681.1_1896746_1896854_-	NA	NA|337aa|down_4|NZ_CP009681.1_1896928_1897939_-	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|174aa|down_5|NZ_CP009681.1_1898437_1898959_-	pfam08741, YwhD, YwhD family	NA|432aa|down_6|NZ_CP009681.1_1898986_1900282_-	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|159aa|down_7|NZ_CP009681.1_1900321_1900798_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|179aa|down_8|NZ_CP009681.1_1900966_1901503_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|313aa|down_9|NZ_CP009681.1_1901713_1902652_-	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	7	2157597-2157698	7	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	CAAATTTAATACTCAATTCATATA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|221aa|up_1|NZ_CP009681.1_2155843_2156506_+,NA|34aa|down_0|NZ_CP009681.1_2158370_2158472_-,NA|98aa|down_5|NZ_CP009681.1_2163459_2163753_+,NA|128aa|down_7|NZ_CP009681.1_2164706_2165090_+,NA|70aa|down_9|NZ_CP009681.1_2165914_2166124_+	NA|77aa|up_9|NZ_CP009681.1_2147648_2147879_+	pfam12645, HTH_16, Helix-turn-helix domain	NA|67aa|up_8|NZ_CP009681.1_2148376_2148577_+	pfam11372, DUF3173, Domain of unknown function (DUF3173)	NA|398aa|up_7|NZ_CP009681.1_2148603_2149797_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|514aa|up_6|NZ_CP009681.1_2149864_2151406_-	PRK00074, guaA, GMP synthase; Reviewed	NA|489aa|up_5|NZ_CP009681.1_2151430_2152897_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|423aa|up_4|NZ_CP009681.1_2152934_2154203_-	TIGR03173, pbuX, xanthine permease	NA|193aa|up_3|NZ_CP009681.1_2154202_2154781_-	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|136aa|up_2|NZ_CP009681.1_2155293_2155701_+	pfam11181, YflT, Heat induced stress protein YflT	NA|221aa|up_1|NZ_CP009681.1_2155843_2156506_+	NA	NA|319aa|up_0|NZ_CP009681.1_2156623_2157580_+	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|34aa|down_0|NZ_CP009681.1_2158370_2158472_-	NA	NA|463aa|down_1|NZ_CP009681.1_2158556_2159945_+	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|252aa|down_2|NZ_CP009681.1_2160025_2160781_-	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|190aa|down_3|NZ_CP009681.1_2161272_2161842_+	TIGR03137, AhpC, peroxiredoxin	NA|508aa|down_4|NZ_CP009681.1_2161857_2163381_+	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|98aa|down_5|NZ_CP009681.1_2163459_2163753_+	NA	NA|209aa|down_6|NZ_CP009681.1_2163825_2164452_+	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|128aa|down_7|NZ_CP009681.1_2164706_2165090_+	NA	NA|194aa|down_8|NZ_CP009681.1_2165155_2165737_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|70aa|down_9|NZ_CP009681.1_2165914_2166124_+	NA
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	8	2414456-2414606	8	CRISPRCasFinder	no	csa3	csa3,DEDDh,DinG,cas3,WYL	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|77aa|up_5|NZ_CP009681.1_2409327_2409558_-,NA|364aa|up_0|NZ_CP009681.1_2413346_2414438_+,NA|35aa|down_0|NZ_CP009681.1_2414937_2415042_-,NA|31aa|down_2|NZ_CP009681.1_2417153_2417246_+	NA|237aa|up_9|NZ_CP009681.1_2404937_2405648_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP009681.1_2405768_2406212_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP009681.1_2406411_2406825_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP009681.1_2407282_2408656_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP009681.1_2409327_2409558_-	NA	NA|313aa|up_4|NZ_CP009681.1_2409588_2410527_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP009681.1_2410961_2411627_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP009681.1_2411778_2412099_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP009681.1_2412100_2413081_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP009681.1_2413346_2414438_+	NA	NA|35aa|down_0|NZ_CP009681.1_2414937_2415042_-	NA	NA|379aa|down_1|NZ_CP009681.1_2415728_2416865_-	pfam02037, SAP, SAP domain	NA|31aa|down_2|NZ_CP009681.1_2417153_2417246_+	NA	NA|286aa|down_3|NZ_CP009681.1_2417950_2418808_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_CP009681.1_2418875_2419658_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_CP009681.1_2419889_2421695_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_CP009681.1_2422375_2423914_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_CP009681.1_2423948_2426081_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_CP009681.1_2426092_2426527_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_CP009681.1_2426526_2427633_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	9	2538617-2538810	2	CRT	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	TGTTGGGGCCCCGCCAACTTGCA	23	3	13	2538640-2538672|2538640-2538672|2538640-2538672|2538640-2538672|2538696-2538731|2538696-2538731|2538696-2538731|2538696-2538731|2538696-2538731|2538755-2538787|2538755-2538787|2538755-2538787|2538755-2538787	NZ_CP009681.1_1050097-1050065|NZ_CP009681.1_1142753-1142785|NZ_CP009681.1_1353543-1353575|NZ_CP009681.1_2815963-2815995|NZ_CP009681.1_1353596-1353631|NZ_CP009681.1_636431-636466|NZ_CP009681.1_316736-316701|NZ_CP009681.1_465586-465551|NZ_CP009681.1_825160-825125|NZ_CP009681.1_1142753-1142785|NZ_CP009681.1_1353543-1353575|NZ_CP009681.1_1726627-1726595|NZ_CP009681.1_2815963-2815995	NA	3	3	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|55aa|up_9|NZ_CP009681.1_2529144_2529309_+,NA|106aa|up_8|NZ_CP009681.1_2529553_2529871_+,NA|84aa|up_5|NZ_CP009681.1_2534995_2535247_+,NA|57aa|up_0|NZ_CP009681.1_2538386_2538557_+,NA	NA|55aa|up_9|NZ_CP009681.1_2529144_2529309_+	NA	NA|106aa|up_8|NZ_CP009681.1_2529553_2529871_+	NA	NA|1056aa|up_7|NZ_CP009681.1_2530057_2533225_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_CP009681.1_2533341_2534607_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP009681.1_2534995_2535247_+	NA	NA|255aa|up_4|NZ_CP009681.1_2535238_2536003_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP009681.1_2536164_2536605_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP009681.1_2536597_2537809_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP009681.1_2537910_2538261_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NZ_CP009681.1_2538386_2538557_+	NA	NA|341aa|down_0|NZ_CP009681.1_2538951_2539974_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP009681.1_2539993_2540593_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP009681.1_2540599_2540833_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP009681.1_2540838_2541285_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP009681.1_2541298_2541784_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP009681.1_2541780_2543040_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP009681.1_2543102_2543597_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP009681.1_2543598_2544105_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP009681.1_2544135_2545140_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP009681.1_2545311_2545917_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_000769575.1_ASM76957v1	NZ_CP009681	Staphylococcus aureus subsp. aureus strain Gv69 chromosome, complete genome	10	3040015-3040098	9	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	TTTCGAAATTCTCTGTGTTGGGACCC	26	1	6	3040041-3040072|3040041-3040072|3040041-3040072|3040041-3040072|3040041-3040072|3040041-3040072	NZ_CP009681.1_1050053-1050022|NZ_CP009681.1_1471549-1471518|NZ_CP009681.1_1726353-1726322|NZ_CP009681.1_1726411-1726380|NZ_CP009681.1_1726469-1726438|NZ_CP009681.1_1726527-1726496	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL	NA|64aa|up_7|NZ_CP009681.1_3033966_3034158_+,NA|166aa|up_6|NZ_CP009681.1_3035244_3035742_-,NA	NA|253aa|up_9|NZ_CP009681.1_3031246_3032005_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_8|NZ_CP009681.1_3031994_3033875_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_7|NZ_CP009681.1_3033966_3034158_+	NA	NA|166aa|up_6|NZ_CP009681.1_3035244_3035742_-	NA	NA|250aa|up_5|NZ_CP009681.1_3035743_3036493_-	pfam15526, Ntox21, Novel toxin 21	NA|268aa|up_4|NZ_CP009681.1_3036511_3037315_-	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins	NA|67aa|up_3|NZ_CP009681.1_3037798_3037999_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|190aa|up_2|NZ_CP009681.1_3038125_3038695_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|132aa|up_1|NZ_CP009681.1_3038947_3039343_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|NZ_CP009681.1_3039410_3039764_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|NZ_CP009681.1_3040316_3041156_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|NZ_CP009681.1_3041198_3041918_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|626aa|down_2|NZ_CP009681.1_3041917_3043795_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|NZ_CP009681.1_3043861_3045241_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|118aa|down_4|NZ_CP009681.1_3045384_3045738_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|NZ_CP009681.1_3045857_3045995_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
