The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009617	Vibrio coralliilyticus strain RE98 chromosome 1, complete sequence	3420228	472160	481478	3420228		Faustovirus(14.29%)	10	NA	NA
WP_006959830.1|472160_473375_+	IscS subfamily cysteine desulfurase	NA	A0A1X7C038	Faustovirus	29.9	6.3e-31
WP_004412993.1|473426_473810_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	1.2e-52
WP_006959829.1|473877_474201_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	1.2e-24
WP_043006939.1|474256_474772_+	co-chaperone HscB	NA	NA	NA	NA	NA
WP_043006941.1|474791_476645_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	40.1	1.1e-108
WP_006959826.1|476658_476997_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_006959825.1|477020_477215_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_043006942.1|477377_478676_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.4	1.2e-35
WP_006959823.1|478734_479163_+	nucleoside-diphosphate kinase	NA	L7Y4C4	Megavirus	42.9	5.5e-22
WP_019274079.1|479390_481478_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.8	1.2e-61
>prophage 2
NZ_CP009617	Vibrio coralliilyticus strain RE98 chromosome 1, complete sequence	3420228	1406793	1449920	3420228	capsid,plate	Vibrio_phage(33.33%)	37	NA	NA
WP_043007843.1|1406793_1408026_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_043007845.1|1408042_1408990_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_043007847.1|1409109_1410777_+	hypothetical protein	NA	A0A2I7S7Q1	Vibrio_phage	35.5	1.8e-15
WP_043007849.1|1411210_1411441_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_043007851.1|1411500_1412409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043007853.1|1412450_1412663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043007855.1|1412770_1412998_-	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_006962059.1|1413251_1413761_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_043007858.1|1413764_1414808_+	23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA	NA	NA	NA	NA
WP_043007860.1|1414824_1415019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043007862.1|1415032_1415707_-	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
WP_006962062.1|1415829_1416642_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_006962063.1|1416628_1417570_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
WP_080748856.1|1417651_1418095_+	ATP-binding protein	NA	A0A218M380	Acidovorax_phage	40.7	6.9e-20
WP_038158760.1|1418073_1418511_+	DUF3859 domain-containing protein	NA	NA	NA	NA	NA
WP_043007864.1|1418543_1420043_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_043007866.1|1420237_1421365_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_043007868.1|1421361_1422522_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_043007870.1|1422523_1423498_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_043007872.1|1423507_1424935_-	TolC family protein	NA	NA	NA	NA	NA
WP_043007874.1|1425037_1426564_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_043007876.1|1426581_1427100_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_006962072.1|1427300_1428272_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_144382760.1|1428704_1431746_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_158502555.1|1431711_1432458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021457565.1|1432460_1435844_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_031343073.1|1435846_1437052_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_006962077.1|1437057_1438389_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_006962078.1|1438409_1438892_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_031343071.1|1438891_1439836_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_038158866.1|1439839_1440553_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_043007884.1|1440549_1441551_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_043007885.1|1441547_1444097_-	MFS transporter	NA	NA	NA	NA	NA
WP_043007886.1|1444116_1446729_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.2	4.9e-89
WP_043007888.1|1446803_1447733_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_043007890.1|1447753_1449505_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_038158808.1|1449497_1449920_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 3
NZ_CP009617	Vibrio coralliilyticus strain RE98 chromosome 1, complete sequence	3420228	2573659	2580343	3420228		Staphylococcus_phage(50.0%)	7	NA	NA
WP_006957919.1|2573659_2574130_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.0	4.9e-32
WP_006957920.1|2574307_2575417_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	2.1e-65
WP_043009024.1|2575497_2576148_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.2	2.9e-35
WP_043009025.1|2576150_2577257_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.7	8.5e-43
WP_006957923.1|2577264_2577714_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_043009026.1|2577944_2579195_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	48.2	7.3e-99
WP_019277477.1|2579209_2580343_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
>prophage 1
NZ_CP009618	Vibrio coralliilyticus strain RE98 chromosome 2, complete sequence	1917482	653417	703841	1917482	plate,integrase,portal,head,holin,capsid,tail	Vibrio_phage(35.0%)	59	647736:647750	678479:678493
647736:647750	attL	TTGTTCTGCTCGATG	NA	NA	NA	NA
WP_043010112.1|653417_654449_-|integrase	tyrosine-type recombinase/integrase	integrase	E5G6L0	Salmonella_phage	53.0	7.6e-94
WP_043010113.1|654763_655612_+	sce7726 family protein	NA	NA	NA	NA	NA
WP_043010114.1|655633_656572_+	sce7725 family protein	NA	NA	NA	NA	NA
WP_052126572.1|656611_657538_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_043010115.1|657558_659220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010117.1|659243_659495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167335959.1|659547_659721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010119.1|659861_660488_-	phage repressor protein CI	NA	A0A1D9C9M6	Salinivibrio_phage	38.8	2.4e-34
WP_043010120.1|660577_660778_+	hypothetical protein	NA	U3PFJ1	Vibrio_phage	50.0	2.6e-11
WP_043010121.1|660901_661441_+	phage regulatory CII family protein	NA	A0A2I7RNI1	Vibrio_phage	58.7	5.8e-53
WP_043010122.1|661469_661682_+	hypothetical protein	NA	A0A2I7RNH0	Vibrio_phage	58.7	3.5e-14
WP_043010123.1|661669_661897_+	hypothetical protein	NA	U3PIK2	Vibrio_phage	54.2	3.6e-17
WP_019275356.1|661893_662127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010124.1|662382_664212_+	replication endonuclease	NA	A0A2P1CKY6	Pseudoalteromonas_phage	38.6	2.3e-69
WP_031342464.1|664339_664558_+	hypothetical protein	NA	Q8HA64	Vibrio_phage	63.9	1.7e-16
WP_043010125.1|664583_664835_+	ogr/Delta-like zinc finger family protein	NA	F1BUT0	Erwinia_phage	41.5	3.5e-05
WP_019275349.1|664995_665487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010128.1|665675_666365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010129.1|666758_667949_+	DNA circularization N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_043010130.1|667945_668884_+|tail	tail protein	tail	NA	NA	NA	NA
WP_043010131.1|668876_669482_+|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
WP_043010132.1|669478_669880_+	phage GP46 family protein	NA	NA	NA	NA	NA
WP_043010133.1|669876_670920_+|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	28.5	5.1e-21
WP_043010134.1|670901_671432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052126574.1|671428_672340_+	hypothetical protein	NA	A0A2I7R3J6	Vibrio_phage	29.8	5.8e-29
WP_043010135.1|672339_672885_+	hypothetical protein	NA	A0A1V0E872	Vibrio_phage	48.2	1.2e-21
WP_043010136.1|673036_673279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010137.1|673275_673821_+	lysozyme	NA	E5G6N1	Salmonella_phage	43.1	1.7e-28
WP_043010138.1|673823_674339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010139.1|674445_674982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010140.1|675015_675987_-|portal	phage portal protein	portal	A0A0M3LS06	Mannheimia_phage	40.1	1.2e-56
WP_043010142.1|677903_678719_+|capsid	GPO family capsid scaffolding protein	capsid	Q94MZ5	Haemophilus_virus	42.2	1.0e-21
678479:678493	attR	CATCGAGCAGAACAA	NA	NA	NA	NA
WP_043010143.1|678751_679789_+|capsid	phage major capsid protein, P2 family	capsid	A0A0U4K5I9	Pseudomonas_phage	40.5	6.3e-64
WP_043010144.1|679897_680347_+|head	head completion/stabilization protein	head	NA	NA	NA	NA
WP_043010145.1|680346_680811_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_043010146.1|680807_681317_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_043010147.1|681316_681499_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_043010148.1|681495_682629_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A0C4UQS0	Shigella_phage	40.4	2.5e-50
WP_043010150.1|682632_682998_+|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_043010151.1|683008_683689_+	phage R protein	NA	NA	NA	NA	NA
WP_043010152.1|683672_683960_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_144382794.1|683998_684103_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_043010153.1|684139_686029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010154.1|686040_687141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043011037.1|687542_688217_+	Rha family transcriptional regulator	NA	Q38450	Enterobacteria_phage	49.2	7.0e-24
WP_038512473.1|688255_688573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010156.1|688855_689215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010157.1|689280_689601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080748891.1|689617_690184_-	RDD family protein	NA	NA	NA	NA	NA
WP_043010159.1|690831_692166_+	PD40 domain-containing protein	NA	NA	NA	NA	NA
WP_043010160.1|692308_694261_-	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_043010161.1|694610_695807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021455653.1|695822_696521_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_006961215.1|696995_697592_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_043010162.1|697612_699073_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_043010163.1|699092_700793_+|holin	choline dehydrogenase	holin	A0A1V0S9J5	Catovirus	29.1	1.0e-55
WP_019274370.1|700821_701760_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_006961210.1|701808_702651_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_043010164.1|702653_703841_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	33.2	2.5e-24
>prophage 2
NZ_CP009618	Vibrio coralliilyticus strain RE98 chromosome 2, complete sequence	1917482	918357	963040	1917482	plate,integrase,portal,protease,capsid,terminase,tail	Vibrio_phage(68.18%)	53	918943:918958	965224:965239
WP_043010285.1|918357_919584_-|integrase	site-specific integrase	integrase	R9TMP3	Vibrio_phage	55.5	1.7e-132
918943:918958	attL	AGCGAGTAGGGTGATC	NA	NA	NA	NA
WP_043010286.1|919562_919763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043011049.1|919826_920012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065814259.1|920016_920208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043011050.1|920407_920674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043010287.1|920810_921470_-	LexA family transcriptional repressor	NA	U5P0T5	Shigella_phage	41.4	4.8e-33
WP_043010288.1|921583_921778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010290.1|921857_922406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052126581.1|922605_923535_+	hypothetical protein	NA	A0A0M3LS90	Mannheimia_phage	41.3	1.1e-22
WP_043010292.1|923521_923941_+	hypothetical protein	NA	A0A2I7QK89	Vibrio_phage	38.6	4.4e-08
WP_043010293.1|923940_924540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010294.1|924987_925563_+	SLATT domain-containing protein	NA	NA	NA	NA	NA
WP_043010295.1|925559_926879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010297.1|927035_927248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010298.1|927228_927756_+	lysozyme	NA	E5G6N1	Salmonella_phage	44.3	7.4e-29
WP_043010299.1|927764_928109_+	DUF2570 family protein	NA	NA	NA	NA	NA
WP_052126582.1|928065_928305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010302.1|928611_929826_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A067ZJC5	Vibrio_phage	33.6	9.0e-54
WP_043010303.1|930255_930819_+|terminase	terminase small subunit	terminase	NA	NA	NA	NA
WP_080748893.1|930832_932767_+|terminase	phage terminase large subunit family protein	terminase	A2I2W6	Vibrio_virus	59.2	1.2e-217
WP_043010304.1|932763_933297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052126583.1|933299_934763_+|portal	phage portal protein	portal	Q6R4V2	Vibrio_virus	46.4	3.9e-112
WP_052126584.1|934692_936567_+|capsid	phage major capsid protein	capsid	Q6R4V3	Vibrio_virus	43.4	1.3e-136
WP_043010306.1|936626_936881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010307.1|936877_937222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010308.1|937184_937802_+	hypothetical protein	NA	R9TR34	Vibrio_phage	55.9	1.2e-62
WP_043010310.1|937798_938353_+	hypothetical protein	NA	R9TNK0	Vibrio_phage	48.0	9.2e-46
WP_052126585.1|938352_939018_+|plate	phage baseplate assembly protein V	plate	R9TPT7	Vibrio_phage	59.9	3.5e-44
WP_043010311.1|939021_939372_+	GPW/gp25 family protein	NA	R9TRM1	Vibrio_phage	58.8	8.1e-32
WP_043010312.1|939368_940259_+|plate	baseplate J/gp47 family protein	plate	R9TML5	Vibrio_phage	48.1	1.1e-69
WP_043010313.1|940255_940807_+|tail	phage tail protein I	tail	R9TR33	Vibrio_phage	62.8	3.9e-65
WP_043010314.1|940807_941713_+	hypothetical protein	NA	A0A068CE15	Rhizobium_phage	37.4	9.8e-21
WP_043010316.1|941709_942201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010317.1|942268_943747_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	R9TMQ0	Vibrio_phage	57.1	1.6e-150
WP_043010318.1|943739_944243_+|tail	phage major tail tube protein	tail	R9TR65	Vibrio_phage	53.6	4.6e-44
WP_043010319.1|944308_944647_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_043010321.1|944762_946445_+|tail	phage tail protein	tail	R9TRP8	Vibrio_phage	56.2	1.4e-134
WP_043010322.1|946448_946850_+|tail	phage tail protein	tail	R9TMP6	Vibrio_phage	56.1	1.1e-37
WP_043010323.1|946827_947037_+|tail	tail protein X	tail	R9TR63	Vibrio_phage	56.7	2.2e-16
WP_043010324.1|947024_948029_+	late control protein D	NA	R9TNM7	Vibrio_phage	52.7	2.9e-90
WP_043010325.1|948186_948744_-	PhnA domain-containing protein	NA	NA	NA	NA	NA
WP_043010327.1|948978_950061_+|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_043010328.1|950095_950884_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_043010329.1|950968_951421_+	hotdog fold thioesterase	NA	NA	NA	NA	NA
WP_043010330.1|951420_951654_+	DUF3389 domain-containing protein	NA	NA	NA	NA	NA
WP_043010331.1|951729_953457_+	SgrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_043010332.1|953440_953692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043010333.1|954144_956283_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_021455435.1|956540_957431_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_043010334.1|957450_960150_-	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_043010335.1|960369_960939_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_043010336.1|961097_962087_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_043010337.1|962083_963040_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
965224:965239	attR	GATCACCCTACTCGCT	NA	NA	NA	NA
