The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007241	Streptococcus pyogenes strain 1E1, complete genome	1796152	36553	48866	1796152		Synechococcus_phage(28.57%)	8	NA	NA
WP_038433839.1|36553_40279_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.9	3.0e-39
WP_023611320.1|40439_41894_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.3	1.7e-54
WP_038433840.1|41921_42944_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	41.5	1.2e-62
WP_002987709.1|43111_43666_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	6.8e-25
WP_002987711.1|43849_45397_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
WP_038433841.1|45454_46579_-	CHAP domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_021340857.1|46831_48097_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002987716.1|48374_48866_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
NZ_CP007241	Streptococcus pyogenes strain 1E1, complete genome	1796152	338065	344100	1796152		Streptococcus_phage(100.0%)	8	NA	NA
WP_002990917.1|338065_338701_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
WP_038433917.1|338718_339594_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.2	3.4e-71
WP_002985838.1|340256_340580_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_038433919.1|340584_341448_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	2.9e-115
WP_023609786.1|341474_341867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038433920.1|341913_342543_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_038433921.1|342842_343199_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.0	3.1e-39
WP_002990895.1|343272_344100_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.5	2.9e-128
>prophage 3
NZ_CP007241	Streptococcus pyogenes strain 1E1, complete genome	1796152	631183	641786	1796152		Streptococcus_phage(57.14%)	9	NA	NA
WP_052117641.1|631183_633394_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.9	5.0e-268
WP_002985142.1|633501_634665_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_002985140.1|634661_635348_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002990262.1|635441_636608_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_038433999.1|636668_637010_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	40.2	3.4e-19
WP_038434000.1|637230_638583_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	1.7e-29
WP_038434002.1|638670_639939_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_038434003.1|639968_640409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038434004.1|640643_641786_+	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
>prophage 4
NZ_CP007241	Streptococcus pyogenes strain 1E1, complete genome	1796152	732370	787051	1796152	head,holin,tail,terminase,protease,integrase,capsid,tRNA,portal	Streptococcus_phage(66.04%)	69	746674:746722	788781:788829
WP_002990117.1|732370_733270_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010922191.1|733342_734581_+	GTPase HflX	NA	NA	NA	NA	NA
WP_002990114.1|734573_735209_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_002984894.1|735223_736153_+	ribonuclease Z	NA	NA	NA	NA	NA
WP_038434033.1|736152_736917_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_038434034.1|736913_739124_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.6	1.1e-70
WP_002990109.1|739273_739792_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	42.4	3.9e-30
WP_002984890.1|739872_740556_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	36.8	2.9e-09
WP_002990106.1|740552_741209_+	endonuclease III	NA	NA	NA	NA	NA
WP_038434035.1|741280_741967_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_021340967.1|741956_742745_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_023079081.1|742784_743891_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_011284728.1|743949_744819_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	64.6	2.4e-101
WP_002990099.1|744818_745412_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	28.2	3.7e-08
WP_011284729.1|745655_746696_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.9	1.1e-68
746674:746722	attL	AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAA	NA	NA	NA	NA
WP_038434036.1|746778_747918_-|integrase	site-specific integrase	integrase	A1EAB7	Streptococcus_phage	55.8	2.9e-118
WP_011106738.1|748041_748347_-	membrane protein	NA	NA	NA	NA	NA
WP_030127591.1|748356_749145_-	phage repressor protein	NA	A0A1S5SD15	Streptococcus_phage	63.0	2.0e-86
WP_038434037.1|749646_749862_-	hypothetical protein	NA	J7KBX0	Streptococcus_phage	95.7	2.0e-28
WP_021340638.1|749920_750079_+	hypothetical protein	NA	J7KH24	Streptococcus_phage	92.3	5.8e-22
WP_001008979.1|750177_750819_-	hypothetical protein	NA	J7KJ31	Streptococcus_phage	100.0	1.5e-116
WP_014411882.1|750911_751151_+	helix-turn-helix transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	98.7	1.4e-35
WP_011017885.1|751242_751452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111674649.1|751450_751780_+	hypothetical protein	NA	A0A141E1M0	Streptococcus_phage	69.5	3.7e-26
WP_038434038.1|751753_751969_-	hypothetical protein	NA	A0A1S5SA41	Streptococcus_phage	61.4	1.9e-15
WP_032465116.1|752074_752386_+	hypothetical protein	NA	A0A1S5SA25	Streptococcus_phage	77.7	4.1e-43
WP_038434039.1|752537_752864_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN6	Streptococcus_phage	72.1	4.4e-32
WP_038434040.1|752933_753416_+	siphovirus Gp157 family protein	NA	A0A1P8VVS5	Streptococcus_phage	98.8	1.8e-77
WP_002995975.1|753416_754097_+	AAA family ATPase	NA	A0A1P8VVS4	Streptococcus_phage	100.0	1.6e-129
WP_038434041.1|754198_755428_+	DEAD/DEAH box helicase	NA	A0A1P8VVM2	Streptococcus_phage	99.3	1.1e-235
WP_011054580.1|755443_755902_+	DUF669 domain-containing protein	NA	A0A1P8VVN0	Streptococcus_phage	99.3	5.0e-82
WP_011106664.1|755904_756717_+	hypothetical protein	NA	A0A1P8VVM6	Streptococcus_phage	98.9	4.6e-155
WP_038434042.1|756706_758188_+	DNA primase	NA	A0A1P8VVM0	Streptococcus_phage	99.2	7.1e-295
WP_011054817.1|758432_758753_+	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	99.1	5.8e-53
WP_011054816.1|758736_759093_+	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	94.9	1.8e-58
WP_032461310.1|759342_759627_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	91.5	5.0e-40
WP_011054813.1|759629_759965_+	hypothetical protein	NA	A0A097PAS4	Streptococcus_pyogenes_phage	100.0	4.7e-45
WP_012560962.1|759967_760453_+	class I SAM-dependent methyltransferase	NA	A0A097PAU8	Streptococcus_pyogenes_phage	99.4	3.6e-94
WP_021340166.1|760456_760684_+	hypothetical protein	NA	A3F630	Streptococcus_phage	76.0	1.9e-26
WP_002987468.1|760781_761183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021340848.1|761182_761818_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.4	2.5e-87
WP_011017866.1|762090_762531_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	100.0	5.0e-79
WP_011284864.1|763302_764217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984360.1|764235_764697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002987543.1|764834_765212_-	HicB family protein	NA	I3NLB2	Bifidobacterium_phage	44.0	3.3e-15
WP_001132273.1|765263_765449_-	addiction module toxin, HicA family	NA	D6PSW1	Lactobacillus_phage	54.0	1.7e-09
WP_021340284.1|765684_766026_+	HNH endonuclease	NA	J7KH36	Streptococcus_phage	90.7	2.5e-54
WP_002985371.1|766193_766661_+|terminase	phage terminase small subunit P27 family	terminase	J7KC46	Streptococcus_phage	98.7	3.9e-82
WP_038434043.1|766675_768430_+|terminase	terminase large subunit	terminase	J7KKD1	Streptococcus_phage	96.6	0.0e+00
WP_002985363.1|768589_768814_+	hypothetical protein	NA	Q938K9	Temperate_phage	61.4	3.6e-17
WP_032465107.1|768847_770068_+|portal	phage portal protein	portal	J7KDU3	Streptococcus_phage	82.2	1.2e-186
WP_032465106.1|770045_770711_+|protease	Clp protease ClpP	protease	M1Q115	Streptococcus_phage	77.7	1.9e-90
WP_021340812.1|770735_771920_+|capsid	phage major capsid protein	capsid	J7KJ82	Streptococcus_phage	76.6	1.5e-162
WP_021340811.1|772064_772367_+|head,tail	phage gp6-like head-tail connector protein	head,tail	J7KC36	Streptococcus_phage	88.8	3.0e-43
WP_003055344.1|772363_772711_+|head	phage head closure protein	head	J7KJ42	Streptococcus_phage	80.9	2.6e-46
WP_003055321.1|772707_773085_+	HK97 gp10 family phage protein	NA	J7KDM3	Streptococcus_phage	76.0	1.5e-47
WP_011017584.1|773081_773507_+	hypothetical protein	NA	J7KBZ9	Streptococcus_phage	84.4	7.2e-67
WP_011017585.1|773522_774131_+	hypothetical protein	NA	J7KKC8	Streptococcus_phage	71.9	6.7e-74
WP_011017586.1|774183_774510_+	hypothetical protein	NA	J7KK85	Streptococcus_phage	75.0	8.3e-39
WP_038434045.1|774719_778643_+|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	48.6	1.5e-238
WP_032465104.1|778642_779350_+	hypothetical protein	NA	Q938K2	Temperate_phage	70.2	3.7e-92
WP_038434046.1|779346_781494_+	peptidase	NA	Q938K1	Temperate_phage	93.2	0.0e+00
WP_011284843.1|781490_782705_+	hypothetical protein	NA	A3F657	Streptococcus_phage	49.5	5.0e-44
WP_021340983.1|782706_783021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011284841.1|783031_784927_+	hypothetical protein	NA	Q938J9	Temperate_phage	52.5	5.9e-76
WP_002988795.1|784940_785102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038434047.1|785104_785716_+	phage protein	NA	A7J2B1	Streptococcus_phage	91.6	7.4e-81
WP_011184730.1|785725_786181_+|holin	phage holin family protein	holin	A0A0M4R3G6	Streptococcus_phage	81.5	2.3e-63
WP_038434049.1|786298_787051_+	CHAP domain-containing protein	NA	A3F665	Streptococcus_phage	96.4	5.1e-140
788781:788829	attR	AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAA	NA	NA	NA	NA
>prophage 5
NZ_CP007241	Streptococcus pyogenes strain 1E1, complete genome	1796152	859773	882543	1796152	transposase	Streptococcus_phage(89.47%)	23	NA	NA
WP_000420682.1|859773_860088_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|860103_860490_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|860518_861904_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_031764745.1|861906_862059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|862081_863287_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|863329_863551_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|863667_864165_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|864139_864646_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_002298631.1|866879_868706_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	33.8	3.2e-26
WP_000804748.1|869759_871937_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|871933_872935_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|872931_873864_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_012386611.1|874138_874225_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691736.1|874240_876160_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_011058338.1|876260_876446_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
WP_001227347.1|876505_876859_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_013670292.1|877063_877135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000804885.1|877363_877786_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|877782_878013_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_001845478.1|878238_878490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000814511.1|878473_878677_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|878758_879976_+|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_032466447.1|881853_882543_+	lantibiotic protection ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	48.2	1.3e-52
