assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000785005.1_ASM78500v1	NZ_CP009876	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH31 chromosome, complete genome	1	590367-590506	1	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	TGCCGGGTGGCGGCTGGCGCCTTACCCGGCCTACAAAACCGAAGCAGCAG	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|428aa|up_9|NZ_CP009876.1_580095_581379_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|469aa|up_8|NZ_CP009876.1_581528_582935_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|NZ_CP009876.1_582980_583673_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|NZ_CP009876.1_583758_584157_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|NZ_CP009876.1_584214_585459_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|NZ_CP009876.1_585564_586023_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_3|NZ_CP009876.1_586280_587738_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|151aa|up_2|NZ_CP009876.1_587780_588233_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_1|NZ_CP009876.1_588235_589291_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|287aa|up_0|NZ_CP009876.1_589450_590311_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|NZ_CP009876.1_590533_590749_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|NZ_CP009876.1_590751_591975_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|199aa|down_2|NZ_CP009876.1_591987_592584_-	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|213aa|down_3|NZ_CP009876.1_592590_593229_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_4|NZ_CP009876.1_593221_594016_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_5|NZ_CP009876.1_594008_595247_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_6|NZ_CP009876.1_595250_596594_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|247aa|down_7|NZ_CP009876.1_597005_597746_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_8|NZ_CP009876.1_597716_598484_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|194aa|down_9|NZ_CP009876.1_598558_599140_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase
GCF_000785005.1_ASM78500v1	NZ_CP009876	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH31 chromosome, complete genome	2	3078491-3078586	2	CRISPRCasFinder	no		DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TGGCACTTTGTTGGCATTCTGTTGGCACAA	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|66aa|up_6|NZ_CP009876.1_3073519_3073717_-,NA|98aa|up_5|NZ_CP009876.1_3074486_3074780_-,NA|96aa|up_4|NZ_CP009876.1_3074779_3075067_-,NA|69aa|up_3|NZ_CP009876.1_3075733_3075940_-,NA|142aa|up_2|NZ_CP009876.1_3075936_3076362_-,NA|101aa|up_1|NZ_CP009876.1_3076358_3076661_-,NA|49aa|down_0|NZ_CP009876.1_3078972_3079119_-,NA|42aa|down_4|NZ_CP009876.1_3080789_3080915_+,NA|95aa|down_7|NZ_CP009876.1_3081626_3081911_+	NA|57aa|up_9|NZ_CP009876.1_3071864_3072035_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|156aa|up_8|NZ_CP009876.1_3072015_3072483_-	pfam05772, NinB, NinB protein	NA|86aa|up_7|NZ_CP009876.1_3072684_3072942_-	pfam06440, DNA_pol3_theta, DNA polymerase III, theta subunit	NA|66aa|up_6|NZ_CP009876.1_3073519_3073717_-	NA	NA|98aa|up_5|NZ_CP009876.1_3074486_3074780_-	NA	NA|96aa|up_4|NZ_CP009876.1_3074779_3075067_-	NA	NA|69aa|up_3|NZ_CP009876.1_3075733_3075940_-	NA	NA|142aa|up_2|NZ_CP009876.1_3075936_3076362_-	NA	NA|101aa|up_1|NZ_CP009876.1_3076358_3076661_-	NA	NA|472aa|up_0|NZ_CP009876.1_3076660_3078076_-	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|49aa|down_0|NZ_CP009876.1_3078972_3079119_-	NA	NA|95aa|down_1|NZ_CP009876.1_3079153_3079438_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|71aa|down_2|NZ_CP009876.1_3079458_3079671_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|199aa|down_3|NZ_CP009876.1_3079779_3080376_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|42aa|down_4|NZ_CP009876.1_3080789_3080915_+	NA	NA|75aa|down_5|NZ_CP009876.1_3080907_3081132_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|145aa|down_6|NZ_CP009876.1_3081121_3081556_+	pfam11672, DUF3268, zinc-finger-containing domain	NA|95aa|down_7|NZ_CP009876.1_3081626_3081911_+	NA	NA|282aa|down_8|NZ_CP009876.1_3081926_3082772_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_9|NZ_CP009876.1_3082768_3083449_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain
GCF_000785005.1_ASM78500v1	NZ_CP009876	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH31 chromosome, complete genome	3	4112616-4115021	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	8	12	4112703-4112734|4112703-4112734|4112764-4112795|4113252-4113283|4113313-4113344|4113496-4113527|4114411-4114442|4114777-4114809|4114961-4114992|4114961-4114992|4114961-4114992|4114961-4114992	NZ_CP009879.1_113523-113492|NZ_CP009879.1_130093-130062|NZ_CP009876.1_3050700-3050669|NZ_CP009879.1_132848-132879|NZ_CP009879.1_131169-131138|NZ_CP009876.1_3047561-3047530|NZ_CP009876.1_3085486-3085455|NZ_CP009876.1_3042098-3042066|NZ_CP009879.1_113179-113148|NZ_CP009879.1_115967-115936|NZ_CP009879.1_129749-129718|NZ_CP009879.1_133082-133051	I-E:I-E:I-E	39,39,38	39	TypeI-E	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|674aa|up_0|NZ_CP009876.1_4110513_4112535_+,NA	NA|237aa|up_9|NZ_CP009876.1_4102070_4102781_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|106aa|up_8|NZ_CP009876.1_4102800_4103118_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|109aa|up_7|NZ_CP009876.1_4103258_4103585_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_6|NZ_CP009876.1_4103635_4104241_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_5|NZ_CP009876.1_4104240_4105668_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_4|NZ_CP009876.1_4105677_4106586_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|469aa|up_3|NZ_CP009876.1_4106595_4108002_-	PRK10637, cysG, siroheme synthase CysG	NA|352aa|up_2|NZ_CP009876.1_4108248_4109304_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|396aa|up_1|NZ_CP009876.1_4109339_4110527_+	pfam11340, DUF3142, Protein of unknown function (DUF3142)	NA|674aa|up_0|NZ_CP009876.1_4110513_4112535_+	NA	cas2|98aa|down_0|NZ_CP009876.1_4115117_4115411_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP009876.1_4115410_4116331_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP009876.1_4116327_4116978_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP009876.1_4116959_4117706_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP009876.1_4117716_4118772_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|181aa|down_5|NZ_CP009876.1_4118790_4119333_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NZ_CP009876.1_4119329_4120886_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|down_7|NZ_CP009876.1_4120897_4123561_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|245aa|down_8|NZ_CP009876.1_4123767_4124502_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NZ_CP009876.1_4124600_4126313_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
