assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	1	363500-363609	1	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	AGTTTCGCCGGTCGACCGGCGAAACT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA,NA|194aa|down_5|NZ_CP009896.1_369557_370139_+,NA|148aa|down_6|NZ_CP009896.1_370135_370579_+	NA|183aa|up_9|NZ_CP009896.1_348357_348906_+	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|791aa|up_8|NZ_CP009896.1_349075_351448_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|111aa|up_7|NZ_CP009896.1_351608_351941_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|452aa|up_6|NZ_CP009896.1_351985_353341_+	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional	NA|767aa|up_5|NZ_CP009896.1_353474_355775_+	PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated	NA|266aa|up_4|NZ_CP009896.1_355777_356575_+	cd06904, M14_MpaA-like, Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins	NA|460aa|up_3|NZ_CP009896.1_356639_358019_+	pfam16640, Big_3_5, Bacterial Ig-like domain (group 3)	NA|499aa|up_2|NZ_CP009896.1_358075_359572_+	COG2890, HemK, Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]	NA|351aa|up_1|NZ_CP009896.1_359600_360653_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)	NA|903aa|up_0|NZ_CP009896.1_360764_363473_+	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|220aa|down_0|NZ_CP009896.1_363679_364339_+	PRK00698, tmk, thymidylate kinase; Validated	NA|384aa|down_1|NZ_CP009896.1_364335_365487_+	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated	NA|519aa|down_2|NZ_CP009896.1_365497_367054_+	pfam08386, Abhydrolase_4, TAP-like protein	NA|429aa|down_3|NZ_CP009896.1_367363_368650_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|262aa|down_4|NZ_CP009896.1_368775_369561_+	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|194aa|down_5|NZ_CP009896.1_369557_370139_+	NA	NA|148aa|down_6|NZ_CP009896.1_370135_370579_+	NA	NA|144aa|down_7|NZ_CP009896.1_370727_371159_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|109aa|down_8|NZ_CP009896.1_371161_371488_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|83aa|down_9|NZ_CP009896.1_371580_371829_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	2	765799-765892	2	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GGCAGTTTCACCGCCTAGGCGGTGAAACTGCC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|188aa|up_7|NZ_CP009896.1_757441_758005_+,NA|499aa|up_6|NZ_CP009896.1_758001_759498_+,NA|455aa|down_1|NZ_CP009896.1_766501_767866_+	NA|535aa|up_9|NZ_CP009896.1_755572_757177_+	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD	NA|83aa|up_8|NZ_CP009896.1_757173_757422_+	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|188aa|up_7|NZ_CP009896.1_757441_758005_+	NA	NA|499aa|up_6|NZ_CP009896.1_758001_759498_+	NA	NA|363aa|up_5|NZ_CP009896.1_759416_760505_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|155aa|up_4|NZ_CP009896.1_760501_760966_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|244aa|up_3|NZ_CP009896.1_761067_761799_+	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional	NA|436aa|up_2|NZ_CP009896.1_761795_763103_+	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|333aa|up_1|NZ_CP009896.1_763099_764098_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|563aa|up_0|NZ_CP009896.1_764094_765783_+	COG0007, CysG, Uroporphyrinogen-III methylase [Coenzyme metabolism]	NA|184aa|down_0|NZ_CP009896.1_765956_766508_+	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|455aa|down_1|NZ_CP009896.1_766501_767866_+	NA	NA|329aa|down_2|NZ_CP009896.1_767888_768875_+	PRK09283, PRK09283, porphobilinogen synthase	NA|408aa|down_3|NZ_CP009896.1_768964_770188_-	cd13399, Slt35-like, Slt35-like lytic transglycosylase	NA|441aa|down_4|NZ_CP009896.1_770442_771765_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|232aa|down_5|NZ_CP009896.1_771761_772457_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|194aa|down_6|NZ_CP009896.1_772453_773035_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|254aa|down_7|NZ_CP009896.1_773027_773789_+	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|506aa|down_8|NZ_CP009896.1_773866_775384_+	pfam05140, ResB, ResB-like family	NA|340aa|down_9|NZ_CP009896.1_775380_776400_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	3	1008314-1008403	3	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GTTTCACCGCCTAGGCGGTGAAACTGCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|415aa|up_8|NZ_CP009896.1_999892_1001137_-,NA|205aa|up_1|NZ_CP009896.1_1006227_1006842_+,NA|137aa|down_6|NZ_CP009896.1_1014404_1014815_-,NA|138aa|down_8|NZ_CP009896.1_1015971_1016385_-	NA|691aa|up_9|NZ_CP009896.1_997573_999646_-	pfam16656, Pur_ac_phosph_N, Purple acid Phosphatase, N-terminal domain	NA|415aa|up_8|NZ_CP009896.1_999892_1001137_-	NA	NA|283aa|up_7|NZ_CP009896.1_1001133_1001982_-	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|196aa|up_6|NZ_CP009896.1_1002050_1002638_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|401aa|up_5|NZ_CP009896.1_1002667_1003870_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|259aa|up_4|NZ_CP009896.1_1003872_1004649_+	PRK07775, PRK07775, SDR family oxidoreductase	NA|461aa|up_3|NZ_CP009896.1_1004645_1006028_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|68aa|up_2|NZ_CP009896.1_1006024_1006228_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|205aa|up_1|NZ_CP009896.1_1006227_1006842_+	NA	NA|487aa|up_0|NZ_CP009896.1_1006838_1008299_+	TIGR04284, aldehyde_dehydrogenase, aldehyde dehydrogenase, Rv0768 family	NA|249aa|down_0|NZ_CP009896.1_1008423_1009170_+	PRK07774, PRK07774, SDR family oxidoreductase	NA|278aa|down_1|NZ_CP009896.1_1009166_1010000_+	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|130aa|down_2|NZ_CP009896.1_1010001_1010391_+	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|231aa|down_3|NZ_CP009896.1_1010474_1011167_+	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|672aa|down_4|NZ_CP009896.1_1011534_1013550_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|216aa|down_5|NZ_CP009896.1_1013794_1014442_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|137aa|down_6|NZ_CP009896.1_1014404_1014815_-	NA	NA|318aa|down_7|NZ_CP009896.1_1014811_1015765_-	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|138aa|down_8|NZ_CP009896.1_1015971_1016385_-	NA	NA|459aa|down_9|NZ_CP009896.1_1016694_1018071_+	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	4	1089965-1090055	4	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GTTTCACCGCCTAGGCGGTGAAACTGCCG	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|594aa|up_9|NZ_CP009896.1_1080897_1082679_+,NA|109aa|up_8|NZ_CP009896.1_1082694_1083021_-,NA|184aa|down_2|NZ_CP009896.1_1091716_1092268_+,NA|415aa|down_4|NZ_CP009896.1_1093007_1094252_+,NA|213aa|down_5|NZ_CP009896.1_1094236_1094875_+	NA|594aa|up_9|NZ_CP009896.1_1080897_1082679_+	NA	NA|109aa|up_8|NZ_CP009896.1_1082694_1083021_-	NA	NA|131aa|up_7|NZ_CP009896.1_1083017_1083410_-	pfam02561, FliS, Flagellar protein FliS	NA|446aa|up_6|NZ_CP009896.1_1083421_1084759_-	COG1345, FliD, Flagellar capping protein [Cell motility and secretion]	NA|266aa|up_5|NZ_CP009896.1_1084868_1085666_-	PRK12804, PRK12804, flagellin; Provisional	NA|271aa|up_4|NZ_CP009896.1_1085785_1086598_-	TIGR02479, RNA_polymerase_sigma_factor_WhiG, RNA polymerase sigma factor, FliA/WhiG family	NA|160aa|up_3|NZ_CP009896.1_1086835_1087315_+	pfam05130, FlgN, FlgN protein	NA|439aa|up_2|NZ_CP009896.1_1087314_1088631_+	PRK07739, flgK, flagellar hook-associated protein FlgK; Validated	NA|297aa|up_1|NZ_CP009896.1_1088644_1089535_+	PRK07701, flgL, flagellar hook-associated protein FlgL; Validated	NA|134aa|up_0|NZ_CP009896.1_1089531_1089933_+	pfam02623, FliW, FliW protein	NA|383aa|down_0|NZ_CP009896.1_1090158_1091307_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|88aa|down_1|NZ_CP009896.1_1091316_1091580_+	pfam02599, CsrA, Global regulator protein family	NA|184aa|down_2|NZ_CP009896.1_1091716_1092268_+	NA	NA|247aa|down_3|NZ_CP009896.1_1092270_1093011_+	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component	NA|415aa|down_4|NZ_CP009896.1_1093007_1094252_+	NA	NA|213aa|down_5|NZ_CP009896.1_1094236_1094875_+	NA	NA|722aa|down_6|NZ_CP009896.1_1094957_1097123_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|156aa|down_7|NZ_CP009896.1_1097119_1097587_+	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea	NA|725aa|down_8|NZ_CP009896.1_1097694_1099869_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|244aa|down_9|NZ_CP009896.1_1099967_1100699_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	5	1362631-1362741	5	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	AGTTTCGCCGGTCGACCGGCGAAACTG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|277aa|up_7|NZ_CP009896.1_1355048_1355879_-,NA|134aa|up_4|NZ_CP009896.1_1357750_1358152_+,NA|395aa|up_1|NZ_CP009896.1_1359974_1361159_+,NA|130aa|down_7|NZ_CP009896.1_1373345_1373735_+	NA|503aa|up_9|NZ_CP009896.1_1353047_1354556_+	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|168aa|up_8|NZ_CP009896.1_1354555_1355059_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|277aa|up_7|NZ_CP009896.1_1355048_1355879_-	NA	NA|369aa|up_6|NZ_CP009896.1_1355923_1357030_+	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein	NA|235aa|up_5|NZ_CP009896.1_1357049_1357754_+	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|134aa|up_4|NZ_CP009896.1_1357750_1358152_+	NA	NA|192aa|up_3|NZ_CP009896.1_1358148_1358724_-	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|374aa|up_2|NZ_CP009896.1_1358856_1359978_+	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins	NA|395aa|up_1|NZ_CP009896.1_1359974_1361159_+	NA	NA|486aa|up_0|NZ_CP009896.1_1361155_1362613_+	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase  AldA-like	NA|546aa|down_0|NZ_CP009896.1_1362834_1364472_+	PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed	NA|571aa|down_1|NZ_CP009896.1_1364474_1366187_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|1097aa|down_2|NZ_CP009896.1_1366474_1369765_-	NF033189, internalin_A, class 1 internalin InlA	NA|533aa|down_3|NZ_CP009896.1_1369865_1371464_+	PRK00074, guaA, GMP synthase; Reviewed	NA|96aa|down_4|NZ_CP009896.1_1371611_1371899_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)	NA|164aa|down_5|NZ_CP009896.1_1372285_1372777_+	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|128aa|down_6|NZ_CP009896.1_1372906_1373290_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|130aa|down_7|NZ_CP009896.1_1373345_1373735_+	NA	NA|290aa|down_8|NZ_CP009896.1_1373777_1374647_+	COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only]	NA|373aa|down_9|NZ_CP009896.1_1374643_1375762_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	6	2112184-2112273	6	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GTTTCACCGCCTAGGCGGTGAAACTGCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA,NA|147aa|down_1|NZ_CP009896.1_2112805_2113246_+,NA|192aa|down_4|NZ_CP009896.1_2114636_2115212_-	NA|275aa|up_9|NZ_CP009896.1_2100740_2101565_+	pfam04625, DEC-1_N, DEC-1 protein, N-terminal region	NA|339aa|up_8|NZ_CP009896.1_2101566_2102583_+	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|374aa|up_7|NZ_CP009896.1_2102603_2103725_+	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|492aa|up_6|NZ_CP009896.1_2103721_2105197_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|313aa|up_5|NZ_CP009896.1_2105283_2106222_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|341aa|up_4|NZ_CP009896.1_2106397_2107420_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|123aa|up_3|NZ_CP009896.1_2107607_2107976_-	COG5496, COG5496, Predicted thioesterase [General function prediction only]	NA|554aa|up_2|NZ_CP009896.1_2107992_2109654_-	PRK05858, PRK05858, acetolactate synthase	NA|286aa|up_1|NZ_CP009896.1_2109695_2110553_-	pfam10978, DUF2785, Protein of unknown function (DUF2785)	NA|495aa|up_0|NZ_CP009896.1_2110684_2112169_+	pfam12282, H_kinase_N, Signal transduction histidine kinase	NA|85aa|down_0|NZ_CP009896.1_2112346_2112601_-	pfam02467, Whib, Transcription factor WhiB	NA|147aa|down_1|NZ_CP009896.1_2112805_2113246_+	NA	NA|274aa|down_2|NZ_CP009896.1_2113221_2114043_-	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA|139aa|down_3|NZ_CP009896.1_2114039_2114456_-	PRK04069, PRK04069, serine-protein kinase RsbW; Provisional	NA|192aa|down_4|NZ_CP009896.1_2114636_2115212_-	NA	NA|254aa|down_5|NZ_CP009896.1_2115448_2116210_-	PRK13808, PRK13808, adenylate kinase; Provisional	NA|138aa|down_6|NZ_CP009896.1_2116464_2116878_-	pfam09055, Sod_Ni, Nickel-containing superoxide dismutase	NA|121aa|down_7|NZ_CP009896.1_2116936_2117299_+	TIGR02754, putative_signal_peptidase, nickel-type superoxide dismutase maturation protease	NA|372aa|down_8|NZ_CP009896.1_2117374_2118490_+	COG0281, SfcA, Malic enzyme [Energy production and conversion]	NA|325aa|down_9|NZ_CP009896.1_2118511_2119486_+	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	7	2890107-2890232	7	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	CGGCAGTTTCACCGCCTAGGCGGTGAAACTGCC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|294aa|up_3|NZ_CP009896.1_2884597_2885479_-,NA|60aa|down_1|NZ_CP009896.1_2890749_2890929_-,NA|101aa|down_6|NZ_CP009896.1_2893742_2894045_-	NA|290aa|up_9|NZ_CP009896.1_2878652_2879522_-	PRK05416, PRK05416, RNase adapter RapZ	NA|669aa|up_8|NZ_CP009896.1_2879526_2881533_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|437aa|up_7|NZ_CP009896.1_2881570_2882881_+	cd05804, StaR_like, StaR_like; a well-conserved protein found in bacteria, plants, and animals	NA|261aa|up_6|NZ_CP009896.1_2882877_2883660_+	pfam00326, Peptidase_S9, Prolyl oligopeptidase family	NA|138aa|up_5|NZ_CP009896.1_2883625_2884039_-	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|165aa|up_4|NZ_CP009896.1_2884031_2884526_-	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|294aa|up_3|NZ_CP009896.1_2884597_2885479_-	NA	NA|1002aa|up_2|NZ_CP009896.1_2885529_2888535_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|229aa|up_1|NZ_CP009896.1_2888697_2889384_+	PRK09583, PRK09583, mycothiol-dependent maleylpyruvate isomerase; Reviewed	NA|224aa|up_0|NZ_CP009896.1_2889406_2890078_+	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|174aa|down_0|NZ_CP009896.1_2890250_2890772_+	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional	NA|60aa|down_1|NZ_CP009896.1_2890749_2890929_-	NA	NA|204aa|down_2|NZ_CP009896.1_2891028_2891640_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|116aa|down_3|NZ_CP009896.1_2891726_2892074_+	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|130aa|down_4|NZ_CP009896.1_2892152_2892542_+	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|366aa|down_5|NZ_CP009896.1_2892620_2893718_-	cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase	NA|101aa|down_6|NZ_CP009896.1_2893742_2894045_-	NA	NA|385aa|down_7|NZ_CP009896.1_2894055_2895210_-	cd03531, Rieske_RO_Alpha_KSH, The alignment model represents the N-terminal rieske iron-sulfur domain of KshA, the oxygenase component of 3-ketosteroid 9-alpha-hydroxylase (KSH)	NA|397aa|down_8|NZ_CP009896.1_2895282_2896473_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|342aa|down_9|NZ_CP009896.1_2896490_2897516_+	cd00567, ACAD, Acyl-CoA dehydrogenase
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	8	3217568-3217656	8	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GAGTTTCGCCGGTCGACCGGCGAAACT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|161aa|up_6|NZ_CP009896.1_3213700_3214183_+,NA|85aa|up_5|NZ_CP009896.1_3214247_3214502_+,NA	NA|440aa|up_9|NZ_CP009896.1_3210785_3212105_-	pfam13347, MFS_2, MFS/sugar transport protein	NA|155aa|up_8|NZ_CP009896.1_3212217_3212682_+	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|237aa|up_7|NZ_CP009896.1_3212946_3213657_-	cd04773, HTH_TioE_rpt2, Second Helix-Turn-Helix DNA binding domain of the regulatory protein TioE	NA|161aa|up_6|NZ_CP009896.1_3213700_3214183_+	NA	NA|85aa|up_5|NZ_CP009896.1_3214247_3214502_+	NA	NA|210aa|up_4|NZ_CP009896.1_3214725_3215355_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|221aa|up_3|NZ_CP009896.1_3215351_3216014_+	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|266aa|up_2|NZ_CP009896.1_3216024_3216822_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|114aa|up_1|NZ_CP009896.1_3216853_3217195_-	COG5649, COG5649, Uncharacterized conserved protein [Function unknown]	NA|108aa|up_0|NZ_CP009896.1_3217205_3217529_-	pfam09424, YqeY, Yqey-like protein	NA|333aa|down_0|NZ_CP009896.1_3217674_3218673_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|160aa|down_1|NZ_CP009896.1_3218802_3219282_+	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|372aa|down_2|NZ_CP009896.1_3219312_3220428_+	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite	NA|321aa|down_3|NZ_CP009896.1_3220424_3221387_-	pfam14525, AraC_binding_2, AraC-binding-like domain	NA|144aa|down_4|NZ_CP009896.1_3221481_3221913_-	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|293aa|down_5|NZ_CP009896.1_3222005_3222884_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|162aa|down_6|NZ_CP009896.1_3222873_3223359_+	cd02210, cupin_BLR2406-like, Bradyrhizobium japonicum BLR2406 and related proteins, cupin domain	NA|341aa|down_7|NZ_CP009896.1_3223238_3224261_+	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|786aa|down_8|NZ_CP009896.1_3224257_3226615_+	PRK08255, PRK08255, bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase	NA|138aa|down_9|NZ_CP009896.1_3226602_3227016_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	9	3489911-3490038	9	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	CGGCCGGCAGCGTGGCGGGAGGCCGTCCTCGGGCAGCTTGCTGCC	45	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|149aa|up_5|NZ_CP009896.1_3484872_3485319_-,NA|211aa|up_4|NZ_CP009896.1_3485444_3486077_-,NA|129aa|down_4|NZ_CP009896.1_3495759_3496146_-	NA|121aa|up_9|NZ_CP009896.1_3481518_3481881_+	pfam03929, PepSY_TM, PepSY-associated TM region	NA|522aa|up_8|NZ_CP009896.1_3481762_3483328_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|225aa|up_7|NZ_CP009896.1_3483312_3483987_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|289aa|up_6|NZ_CP009896.1_3483994_3484861_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|149aa|up_5|NZ_CP009896.1_3484872_3485319_-	NA	NA|211aa|up_4|NZ_CP009896.1_3485444_3486077_-	NA	NA|305aa|up_3|NZ_CP009896.1_3486211_3487126_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|129aa|up_2|NZ_CP009896.1_3487196_3487583_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|478aa|up_1|NZ_CP009896.1_3487536_3488970_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|279aa|up_0|NZ_CP009896.1_3489072_3489909_+	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|155aa|down_0|NZ_CP009896.1_3490214_3490679_-	cd03018, PRX_AhpE_like, Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE	NA|548aa|down_1|NZ_CP009896.1_3490711_3492355_-	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|126aa|down_2|NZ_CP009896.1_3492365_3492743_-	pfam11253, DUF3052, Protein of unknown function (DUF3052)	NA|953aa|down_3|NZ_CP009896.1_3492922_3495781_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|129aa|down_4|NZ_CP009896.1_3495759_3496146_-	NA	NA|235aa|down_5|NZ_CP009896.1_3496286_3496991_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|81aa|down_6|NZ_CP009896.1_3497146_3497389_+	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|324aa|down_7|NZ_CP009896.1_3497385_3498357_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|331aa|down_8|NZ_CP009896.1_3498353_3499346_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|462aa|down_9|NZ_CP009896.1_3499342_3500728_+	COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	10	3535146-3535236	10	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GGCAGTTTCACCGCCTAAGCGGTGAAACTG	30	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA,NA|321aa|down_4|NZ_CP009896.1_3537830_3538793_+	NA|206aa|up_9|NZ_CP009896.1_3527124_3527742_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|370aa|up_8|NZ_CP009896.1_3527738_3528848_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|264aa|up_7|NZ_CP009896.1_3528865_3529657_-	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|305aa|up_6|NZ_CP009896.1_3529653_3530568_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|116aa|up_5|NZ_CP009896.1_3530636_3530984_-	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism]	NA|96aa|up_4|NZ_CP009896.1_3531025_3531313_+	pfam07045, DUF1330, Domain of unknown function (DUF1330)	NA|308aa|up_3|NZ_CP009896.1_3531318_3532242_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|430aa|up_2|NZ_CP009896.1_3532228_3533518_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|157aa|up_1|NZ_CP009896.1_3533514_3533985_-	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|357aa|up_0|NZ_CP009896.1_3533981_3535052_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|116aa|down_0|NZ_CP009896.1_3535255_3535603_-	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|289aa|down_1|NZ_CP009896.1_3535668_3536535_-	PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional	NA|191aa|down_2|NZ_CP009896.1_3536622_3537195_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|188aa|down_3|NZ_CP009896.1_3537270_3537834_+	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|321aa|down_4|NZ_CP009896.1_3537830_3538793_+	NA	NA|306aa|down_5|NZ_CP009896.1_3538824_3539742_+	pfam10648, Gmad2, Immunoglobulin-like domain of bacterial spore germination	NA|351aa|down_6|NZ_CP009896.1_3539748_3540801_+	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|248aa|down_7|NZ_CP009896.1_3540805_3541549_-	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|390aa|down_8|NZ_CP009896.1_3541562_3542732_-	PRK14278, PRK14278, chaperone protein DnaJ; Provisional	NA|345aa|down_9|NZ_CP009896.1_3542745_3543780_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	11	3911990-3912078	11	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	AGTTTCGCCGGTCGACCGGTGAAACTC	27	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA,NA|102aa|down_2|NZ_CP009896.1_3913746_3914052_+,NA|638aa|down_4|NZ_CP009896.1_3917051_3918965_+,NA|218aa|down_6|NZ_CP009896.1_3919897_3920551_-,NA|238aa|down_7|NZ_CP009896.1_3920624_3921338_-	NA|292aa|up_9|NZ_CP009896.1_3900930_3901806_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|160aa|up_8|NZ_CP009896.1_3901891_3902371_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|336aa|up_7|NZ_CP009896.1_3902503_3903511_+	cd13557, PBP2_SsuA, Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|273aa|up_6|NZ_CP009896.1_3903507_3904326_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|253aa|up_5|NZ_CP009896.1_3904322_3905081_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|345aa|up_4|NZ_CP009896.1_3905077_3906112_+	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|296aa|up_3|NZ_CP009896.1_3906108_3906996_+	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite	NA|402aa|up_2|NZ_CP009896.1_3906992_3908198_+	TIGR03565, alk_sulf_monoox, alkanesulfonate monooxygenase, FMNH(2)-dependent	NA|313aa|up_1|NZ_CP009896.1_3908194_3909133_+	cd13554, PBP2_DszB, Substrate binding domain of 2'-hydroxybiphenyl-2-sulfinate desulfinase, a member of the type 2 periplasmic binding fold superfamily	NA|616aa|up_0|NZ_CP009896.1_3910110_3911958_-	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|149aa|down_0|NZ_CP009896.1_3912081_3912528_-	cd07818, SRPBCC_1, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|361aa|down_1|NZ_CP009896.1_3912537_3913620_-	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,	NA|102aa|down_2|NZ_CP009896.1_3913746_3914052_+	NA	NA|951aa|down_3|NZ_CP009896.1_3914041_3916894_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|638aa|down_4|NZ_CP009896.1_3917051_3918965_+	NA	NA|284aa|down_5|NZ_CP009896.1_3919032_3919884_+	COG5006, rhtA, Threonine/homoserine efflux transporter [Amino acid transport and metabolism]	NA|218aa|down_6|NZ_CP009896.1_3919897_3920551_-	NA	NA|238aa|down_7|NZ_CP009896.1_3920624_3921338_-	NA	NA|312aa|down_8|NZ_CP009896.1_3921447_3922383_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|393aa|down_9|NZ_CP009896.1_3922379_3923558_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	12	4061046-4061135	12	CRISPRCasFinder	no	WYL	csa3,DinG,WYL,cas3,DEDDh,cas4	Unclear	GTTTCACCGCCTAGGCGGTGAAACTGCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|171aa|up_7|NZ_CP009896.1_4053184_4053697_-,NA|65aa|up_6|NZ_CP009896.1_4053892_4054087_-,NA	NA|189aa|up_9|NZ_CP009896.1_4051709_4052276_-	pfam00746, Gram_pos_anchor, LPXTG cell wall anchor motif	NA|255aa|up_8|NZ_CP009896.1_4052356_4053121_-	cd05830, Sortase_E, Sortase domain found in the class E family of sortases	NA|171aa|up_7|NZ_CP009896.1_4053184_4053697_-	NA	NA|65aa|up_6|NZ_CP009896.1_4053892_4054087_-	NA	NA|297aa|up_5|NZ_CP009896.1_4054150_4055041_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|190aa|up_4|NZ_CP009896.1_4055206_4055776_+	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|923aa|up_3|NZ_CP009896.1_4055798_4058567_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|390aa|up_2|NZ_CP009896.1_4058660_4059830_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|262aa|up_1|NZ_CP009896.1_4059828_4060614_+	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|140aa|up_0|NZ_CP009896.1_4060610_4061030_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|396aa|down_0|NZ_CP009896.1_4061639_4062827_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|98aa|down_1|NZ_CP009896.1_4062854_4063148_-	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|307aa|down_2|NZ_CP009896.1_4063274_4064195_-	cd07302, CHD, cyclase homology domain	NA|174aa|down_3|NZ_CP009896.1_4064187_4064709_-	pfam03703, bPH_2, Bacterial PH domain	NA|313aa|down_4|NZ_CP009896.1_4064754_4065693_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|538aa|down_5|NZ_CP009896.1_4065649_4067263_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|74aa|down_6|NZ_CP009896.1_4067259_4067481_+	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|371aa|down_7|NZ_CP009896.1_4067532_4068645_-	pfam06441, EHN, Epoxide hydrolase N-terminus	WYL|339aa|down_8|NZ_CP009896.1_4068699_4069716_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|557aa|down_9|NZ_CP009896.1_4069712_4071383_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	13	4726849-4726965	13	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	CGGCAGTTTCACCGCCTAGGCGGTGAAACTGCC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|513aa|up_6|NZ_CP009896.1_4719805_4721344_+,NA|348aa|up_0|NZ_CP009896.1_4725773_4726817_+,NA	NA|355aa|up_9|NZ_CP009896.1_4715747_4716812_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|497aa|up_8|NZ_CP009896.1_4716835_4718326_-	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional	NA|464aa|up_7|NZ_CP009896.1_4718329_4719721_-	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown]	NA|513aa|up_6|NZ_CP009896.1_4719805_4721344_+	NA	NA|451aa|up_5|NZ_CP009896.1_4721359_4722712_-	PRK07907, PRK07907, hypothetical protein; Provisional	NA|219aa|up_4|NZ_CP009896.1_4722756_4723413_+	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|122aa|up_3|NZ_CP009896.1_4723399_4723765_-	pfam17844, SCP_3, Bacterial SCP ortholog	NA|201aa|up_2|NZ_CP009896.1_4723764_4724367_-	pfam12840, HTH_20, Helix-turn-helix domain	NA|420aa|up_1|NZ_CP009896.1_4724436_4725696_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|348aa|up_0|NZ_CP009896.1_4725773_4726817_+	NA	NA|758aa|down_0|NZ_CP009896.1_4726991_4729265_-	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|476aa|down_1|NZ_CP009896.1_4729493_4730921_+	cd06418, GH25_BacA-like, BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues	NA|442aa|down_2|NZ_CP009896.1_4730933_4732259_-	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only]	NA|544aa|down_3|NZ_CP009896.1_4732260_4733892_-	COG0494, MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes [DNA replication, recombination, and repair / General function prediction only]	NA|512aa|down_4|NZ_CP009896.1_4733992_4735528_-	pfam07905, PucR, Purine catabolism regulatory protein-like family	NA|153aa|down_5|NZ_CP009896.1_4735657_4736116_+	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases	NA|433aa|down_6|NZ_CP009896.1_4736112_4737411_+	PRK11017, codB, cytosine permease; Provisional	NA|223aa|down_7|NZ_CP009896.1_4737507_4738176_-	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|82aa|down_8|NZ_CP009896.1_4738172_4738418_-	PRK05974, PRK05974, phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed	NA|343aa|down_9|NZ_CP009896.1_4738399_4739428_-	pfam12852, Cupin_6, Cupin
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	14	4937656-4937748	14	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GGCTGGCCGTAGGGCTGCTGGGGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|513aa|up_6|NZ_CP009896.1_4930020_4931559_+,NA|301aa|down_0|NZ_CP009896.1_4937853_4938756_-	NA|1081aa|up_9|NZ_CP009896.1_4922411_4925654_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|846aa|up_8|NZ_CP009896.1_4925836_4928374_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|491aa|up_7|NZ_CP009896.1_4928500_4929973_+	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|513aa|up_6|NZ_CP009896.1_4930020_4931559_+	NA	NA|185aa|up_5|NZ_CP009896.1_4931568_4932123_-	COG3545, COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]	NA|118aa|up_4|NZ_CP009896.1_4932175_4932529_+	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|261aa|up_3|NZ_CP009896.1_4932512_4933295_-	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071)	NA|456aa|up_2|NZ_CP009896.1_4933297_4934665_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|326aa|up_1|NZ_CP009896.1_4934678_4935656_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|378aa|up_0|NZ_CP009896.1_4935652_4936786_-	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|301aa|down_0|NZ_CP009896.1_4937853_4938756_-	NA	NA|241aa|down_1|NZ_CP009896.1_4938769_4939492_-	pfam10708, DUF2510, Protein of unknown function (DUF2510)	NA|341aa|down_2|NZ_CP009896.1_4939923_4940946_-	pfam05308, Mito_fiss_reg, Mitochondrial fission regulator	NA|206aa|down_3|NZ_CP009896.1_4940942_4941560_-	pfam10708, DUF2510, Protein of unknown function (DUF2510)	NA|235aa|down_4|NZ_CP009896.1_4941635_4942340_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|131aa|down_5|NZ_CP009896.1_4942370_4942763_+	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|145aa|down_6|NZ_CP009896.1_4942854_4943289_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|285aa|down_7|NZ_CP009896.1_4943355_4944210_+	PRK07819, PRK07819, 3-hydroxybutyryl-CoA dehydrogenase; Validated	NA|568aa|down_8|NZ_CP009896.1_4944711_4946415_-	cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|354aa|down_9|NZ_CP009896.1_4946499_4947561_-	pfam13816, Dehydratase_hem, Haem-containing dehydratase
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	15	4982395-4982482	15	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	AGTTTCGCCGGTCGACCGGCGAAACT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA,NA|410aa|down_1|NZ_CP009896.1_4983673_4984903_-,NA|151aa|down_2|NZ_CP009896.1_4985068_4985521_+,NA|320aa|down_3|NZ_CP009896.1_4985525_4986485_+,NA|459aa|down_4|NZ_CP009896.1_4986481_4987858_+,NA|124aa|down_5|NZ_CP009896.1_4987847_4988219_-	NA|99aa|up_9|NZ_CP009896.1_4972264_4972561_+	TIGR02118, TIGR02118, conserved hypothetical protein	NA|425aa|up_8|NZ_CP009896.1_4972500_4973775_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|166aa|up_7|NZ_CP009896.1_4973932_4974430_+	pfam13279, 4HBT_2, Thioesterase-like superfamily	NA|304aa|up_6|NZ_CP009896.1_4974569_4975481_-	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16	NA|254aa|up_5|NZ_CP009896.1_4975670_4976432_+	cd01144, BtuF, Cobalamin binding protein BtuF	NA|532aa|up_4|NZ_CP009896.1_4976813_4978409_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|99aa|up_3|NZ_CP009896.1_4978489_4978786_+	COG5450, COG5450, Transcription regulator of the Arc/MetJ class [Transcription]	NA|179aa|up_2|NZ_CP009896.1_4978790_4979327_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|489aa|up_1|NZ_CP009896.1_4979350_4980817_-	PRK05326, PRK05326, potassium/proton antiporter	NA|482aa|up_0|NZ_CP009896.1_4980947_4982393_+	PRK07121, PRK07121, FAD-binding protein	NA|374aa|down_0|NZ_CP009896.1_4982555_4983677_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|410aa|down_1|NZ_CP009896.1_4983673_4984903_-	NA	NA|151aa|down_2|NZ_CP009896.1_4985068_4985521_+	NA	NA|320aa|down_3|NZ_CP009896.1_4985525_4986485_+	NA	NA|459aa|down_4|NZ_CP009896.1_4986481_4987858_+	NA	NA|124aa|down_5|NZ_CP009896.1_4987847_4988219_-	NA	NA|443aa|down_6|NZ_CP009896.1_4988202_4989531_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|329aa|down_7|NZ_CP009896.1_4989689_4990676_+	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|564aa|down_8|NZ_CP009896.1_4990697_4992389_+	PLN02852, PLN02852, ferredoxin-NADP+ reductase	NA|239aa|down_9|NZ_CP009896.1_4992409_4993126_+	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	16	4994591-4994681	16	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	CGGCAGTTTCACCGCCTAGGCGGTGAAAC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|410aa|up_9|NZ_CP009896.1_4983673_4984903_-,NA|151aa|up_8|NZ_CP009896.1_4985068_4985521_+,NA|320aa|up_7|NZ_CP009896.1_4985525_4986485_+,NA|459aa|up_6|NZ_CP009896.1_4986481_4987858_+,NA|124aa|up_5|NZ_CP009896.1_4987847_4988219_-,NA|132aa|down_2|NZ_CP009896.1_4997134_4997530_+	NA|410aa|up_9|NZ_CP009896.1_4983673_4984903_-	NA	NA|151aa|up_8|NZ_CP009896.1_4985068_4985521_+	NA	NA|320aa|up_7|NZ_CP009896.1_4985525_4986485_+	NA	NA|459aa|up_6|NZ_CP009896.1_4986481_4987858_+	NA	NA|124aa|up_5|NZ_CP009896.1_4987847_4988219_-	NA	NA|443aa|up_4|NZ_CP009896.1_4988202_4989531_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|329aa|up_3|NZ_CP009896.1_4989689_4990676_+	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|564aa|up_2|NZ_CP009896.1_4990697_4992389_+	PLN02852, PLN02852, ferredoxin-NADP+ reductase	NA|239aa|up_1|NZ_CP009896.1_4992409_4993126_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|486aa|up_0|NZ_CP009896.1_4993126_4994584_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|470aa|down_0|NZ_CP009896.1_4994688_4996098_-	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein	NA|306aa|down_1|NZ_CP009896.1_4996100_4997018_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|132aa|down_2|NZ_CP009896.1_4997134_4997530_+	NA	NA|453aa|down_3|NZ_CP009896.1_4997591_4998950_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|291aa|down_4|NZ_CP009896.1_4998960_4999833_-	pfam08378, NERD, Nuclease-related domain	NA|121aa|down_5|NZ_CP009896.1_4999906_5000269_-	pfam12680, SnoaL_2, SnoaL-like domain	NA|369aa|down_6|NZ_CP009896.1_5000273_5001380_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|504aa|down_7|NZ_CP009896.1_5001425_5002937_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|263aa|down_8|NZ_CP009896.1_5003047_5003836_+	PRK13756, PRK13756, TetR family transcriptional regulator	NA|206aa|down_9|NZ_CP009896.1_5003855_5004473_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_000785495.1_ASM78549v1	NZ_CP009896	Pimelobacter simplex strain VKM Ac-2033D chromosome, complete genome	17	5350769-5350881	17	CRISPRCasFinder	no		csa3,DinG,WYL,cas3,DEDDh,cas4	Orphan	GGCAGTTTCACCGCCTAGGCGGTGAAACT	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas3,DEDDh,cas4	NA|510aa|up_4|NZ_CP009896.1_5345856_5347386_+,NA	NA|658aa|up_9|NZ_CP009896.1_5341027_5343001_-	COG3590, PepO, Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones]	NA|177aa|up_8|NZ_CP009896.1_5343098_5343629_+	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|177aa|up_7|NZ_CP009896.1_5343750_5344281_+	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|163aa|up_6|NZ_CP009896.1_5344325_5344814_+	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|321aa|up_5|NZ_CP009896.1_5344835_5345798_-	cd08241, QOR1, Quinone oxidoreductase (QOR)	NA|510aa|up_4|NZ_CP009896.1_5345856_5347386_+	NA	NA|449aa|up_3|NZ_CP009896.1_5347375_5348722_-	TIGR03356, BGL, beta-galactosidase	NA|232aa|up_2|NZ_CP009896.1_5348784_5349480_+	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|156aa|up_1|NZ_CP009896.1_5349492_5349960_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|226aa|up_0|NZ_CP009896.1_5349956_5350634_-	PRK00393, ribA, GTP cyclohydrolase II RibA	NA|842aa|down_0|NZ_CP009896.1_5350907_5353433_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|199aa|down_1|NZ_CP009896.1_5353431_5354028_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|521aa|down_2|NZ_CP009896.1_5354024_5355587_+	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|191aa|down_3|NZ_CP009896.1_5355615_5356188_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|311aa|down_4|NZ_CP009896.1_5356336_5357269_+	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|342aa|down_5|NZ_CP009896.1_5357360_5358386_+	PRK08241, PRK08241, RNA polymerase subunit sigma-70	NA|194aa|down_6|NZ_CP009896.1_5358391_5358973_+	TIGR03086, TIGR03086, TIGR03086 family protein	NA|418aa|down_7|NZ_CP009896.1_5358988_5360242_+	pfam06772, LtrA, Bacterial low temperature requirement A protein (LtrA)	NA|436aa|down_8|NZ_CP009896.1_5360245_5361553_-	TIGR00900, multidrug_transporter, H+ Antiporter protein	NA|491aa|down_9|NZ_CP009896.1_5361561_5363034_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like
