The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009941	Bacillus cereus strain 03BB87 chromosome, complete genome	5457398	828203	835884	5457398		uncultured_Caudovirales_phage(16.67%)	10	NA	NA
WP_033691318.1|828203_829187_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.2	2.1e-16
WP_000403735.1|829176_829947_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.1	2.2e-13
WP_033691316.1|829979_830744_+	class B sortase	NA	NA	NA	NA	NA
WP_000587814.1|830809_831133_-	heme oxygenase	NA	NA	NA	NA	NA
WP_001255958.1|831429_832629_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.2	6.1e-71
WP_033691314.1|832668_832863_-	YwbE family protein	NA	NA	NA	NA	NA
WP_001293578.1|832863_833037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033691311.1|833205_833898_+	response regulator transcription factor	NA	B5LWA6	Feldmannia_species_virus	28.8	1.4e-06
WP_033691309.1|833899_834835_+	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.9	8.6e-12
WP_033691307.1|834960_835884_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.5	6.9e-46
>prophage 2
NZ_CP009941	Bacillus cereus strain 03BB87 chromosome, complete genome	5457398	2754874	2764051	5457398		Geobacillus_phage(25.0%)	11	NA	NA
WP_000540642.1|2754874_2755681_+	N-acetylmuramoyl-L-alanine amidase	NA	D2XR33	Bacillus_phage	68.9	2.1e-107
WP_001981065.1|2755698_2755911_-	DUF3006 domain-containing protein	NA	Q0H256	Geobacillus_phage	52.9	1.9e-12
WP_001981062.1|2755913_2757299_-	S-layer homology domain-containing protein	NA	Q0H255	Geobacillus_phage	59.9	6.0e-78
WP_001981059.1|2757729_2758146_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000648514.1|2758148_2758502_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_033691753.1|2758523_2759231_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	27.0	6.7e-17
WP_002194813.1|2759296_2759683_+	DUF2809 domain-containing protein	NA	NA	NA	NA	NA
WP_002194812.1|2759704_2760208_+	DNA topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	46.1	2.5e-42
WP_002194811.1|2760354_2761035_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BUR2	Microcystis_phage	38.2	3.0e-30
WP_033691752.1|2761120_2762314_+	glycosyl transferase family 1	NA	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	26.2	3.1e-06
WP_002194809.1|2762683_2764051_+	lytic polysaccharide monooxygenase	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	38.1	4.3e-20
>prophage 3
NZ_CP009941	Bacillus cereus strain 03BB87 chromosome, complete genome	5457398	3468913	3483270	5457398		Bacillus_phage(60.0%)	14	NA	NA
WP_001258498.1|3468913_3469786_-	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	42.9	4.0e-64
WP_002194884.1|3469918_3470590_-	O-methyltransferase	NA	W8CYT3	Bacillus_phage	90.5	2.6e-63
WP_000818985.1|3470737_3471457_-	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	5.9e-61
WP_001979959.1|3471950_3472868_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	44.1	1.4e-43
WP_001979957.1|3472864_3473617_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001979955.1|3473629_3474361_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001979953.1|3474383_3474734_+	YxeA family protein	NA	NA	NA	NA	NA
WP_001979951.1|3475084_3475798_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.9	1.2e-37
WP_001979949.1|3475798_3477211_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	26.2	7.1e-10
WP_033691618.1|3477289_3478378_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	89.8	2.5e-172
WP_139254152.1|3478374_3479079_-	response regulator	NA	W8CYM9	Bacillus_phage	92.7	6.5e-121
WP_033691617.1|3479140_3480901_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	96.7	2.1e-269
WP_033691616.1|3481140_3481905_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_033691615.1|3482001_3483270_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	32.0	7.6e-11
>prophage 4
NZ_CP009941	Bacillus cereus strain 03BB87 chromosome, complete genome	5457398	5072141	5080514	5457398		Synechococcus_phage(50.0%)	8	NA	NA
WP_001979846.1|5072141_5072729_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.8	7.7e-27
WP_001262445.1|5072725_5073766_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.9	3.2e-68
WP_000879025.1|5073868_5075284_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.3e-55
WP_000055574.1|5075268_5077488_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.3	4.4e-163
WP_001979839.1|5077471_5078155_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000278820.1|5078151_5078406_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001170542.1|5078398_5079118_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	5.2e-49
WP_000625683.1|5079206_5080514_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.3	6.4e-21
>prophage 5
NZ_CP009941	Bacillus cereus strain 03BB87 chromosome, complete genome	5457398	5116319	5124268	5457398		Bacillus_phage(33.33%)	6	NA	NA
WP_033692601.1|5116319_5117825_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	31.1	4.1e-32
WP_001975561.1|5117808_5118510_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	9.5e-40
WP_000833097.1|5118655_5119981_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.4	9.2e-44
WP_162837124.1|5120364_5121906_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.2	3.4e-21
WP_001975554.1|5122310_5123945_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.0	4.5e-157
WP_000917306.1|5123983_5124268_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	53.8	1.2e-20
>prophage 1
NZ_CP009939	Bacillus cereus strain 03BB87 plasmid pBCN, complete sequence	52166	2	52112	52166	transposase,tail,portal,capsid,integrase,terminase	Bacillus_phage(61.82%)	78	NA	NA
WP_001981282.1|2_542_-|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	49.2	7.8e-42
WP_161772890.1|1067_1412_-	hypothetical protein	NA	U5PTS2	Bacillus_phage	58.7	4.7e-24
WP_033691984.1|1504_1690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001981227.1|2665_3037_-	DUF1492 domain-containing protein	NA	A0A1B1P853	Bacillus_phage	39.8	3.4e-12
WP_033691981.1|3296_3719_-	DUF1064 domain-containing protein	NA	A0A1B1P859	Bacillus_phage	91.4	1.8e-70
WP_001981230.1|3719_3959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001981114.1|3976_4150_-	hypothetical protein	NA	A0A1B1P875	Bacillus_phage	91.2	5.8e-23
WP_001981119.1|4381_4522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144318820.1|4558_4741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173405271.1|4843_5011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001981129.1|5049_5541_-	dUTP diphosphatase	NA	M4W9N7	Bacillus_phage	38.2	2.9e-19
WP_001981132.1|5545_5722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001981134.1|5732_5966_-	glutaredoxin family protein	NA	A0A1B1P8E0	Bacillus_phage	81.3	3.9e-30
WP_001981135.1|5965_6607_-	hypothetical protein	NA	A0A2H4JAZ2	uncultured_Caudovirales_phage	41.4	2.7e-41
WP_001981136.1|6673_6868_-	hypothetical protein	NA	A0A1B1P7U9	Bacillus_phage	79.7	2.1e-21
WP_080332081.1|6851_6995_-	Fur-regulated basic protein FbpA	NA	A0A1B1P8B6	Bacillus_phage	77.8	2.4e-11
WP_001981137.1|7003_7411_-	hypothetical protein	NA	A0A1B1P8A6	Bacillus_phage	70.1	4.1e-27
WP_001981568.1|7407_7860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001981644.1|7870_8446_-	hypothetical protein	NA	A0A0E3DEV0	Bacillus_phage	44.9	1.2e-37
WP_001981646.1|8471_8789_-	hypothetical protein	NA	A0A0M4R373	Bacillus_phage	44.8	4.9e-12
WP_002194858.1|8804_9068_-	hypothetical protein	NA	A0A0S2GLK4	Bacillus_phage	59.1	5.7e-22
WP_002194857.1|9064_9256_-	hypothetical protein	NA	A0A1B1P8D7	Bacillus_phage	74.6	1.9e-19
WP_038357018.1|9271_10030_-	ATP-binding protein	NA	U5PWH5	Bacillus_phage	39.9	1.8e-36
WP_038357017.1|10013_10772_-	DnaD domain protein	NA	A0A1B1P8C4	Bacillus_phage	56.1	7.1e-57
WP_002194854.1|10771_10948_-	hypothetical protein	NA	A0A1B1P897	Bacillus_phage	71.4	9.7e-18
WP_002194853.1|10961_11645_-	ERF family protein	NA	A0A2H4J7J4	uncultured_Caudovirales_phage	48.9	3.3e-37
WP_002194852.1|11641_11845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173405270.1|11841_12018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038357016.1|12019_12574_-	HNH endonuclease	NA	D7PQ37	Enterococcus_phage	41.6	3.1e-25
WP_038357015.1|12570_12765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038357014.1|12958_13174_+	KTSC domain-containing protein	NA	NA	NA	NA	NA
WP_116777354.1|13170_13335_-	BC1881 family protein	NA	NA	NA	NA	NA
WP_002194848.1|13562_14711_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	S6AND0	Bacillus_phage	80.4	2.7e-172
WP_173405269.1|14703_14856_-	hypothetical protein	NA	B5LPL6	Bacillus_virus	75.6	5.8e-11
WP_038357013.1|15056_15242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173405268.1|15275_15419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002194845.1|15535_16312_-	phage antirepressor Ant	NA	A0A0A8WHY0	Clostridium_phage	33.8	1.5e-38
WP_038357012.1|16376_16580_-	helix-turn-helix transcriptional regulator	NA	A0A0A7AQV9	Bacillus_phage	56.2	1.9e-12
WP_002194844.1|16758_17109_+	helix-turn-helix transcriptional regulator	NA	A0A0A7AR52	Bacillus_phage	48.7	1.8e-23
WP_002194843.1|17153_17273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173405267.1|17412_17568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002194841.1|17607_18801_-	helix-turn-helix transcriptional regulator	NA	A0A0S2MVK2	Bacillus_phage	52.8	3.8e-113
WP_033691960.1|19303_19648_+	helix-turn-helix domain-containing protein	NA	A0A1B1P888	Bacillus_phage	62.2	3.2e-33
WP_002194840.1|19841_20450_+	DUF4352 domain-containing protein	NA	A0A1B1P898	Bacillus_phage	92.6	6.7e-66
WP_002194838.1|20704_21457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033691958.1|21453_21858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002194835.1|23527_24349_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	44.6	4.4e-52
WP_038357010.1|24350_24731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038357009.1|24830_25088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002194832.1|25131_25722_-	DUF3967 domain-containing protein	NA	A0A1Z1LZN4	Bacillus_phage	32.5	1.5e-09
WP_002194831.1|26455_26695_+	helix-turn-helix transcriptional regulator	NA	A0A0S2GLH4	Bacillus_phage	76.7	2.0e-26
WP_038357008.1|26785_27142_+	YolD-like family protein	NA	NA	NA	NA	NA
WP_002194829.1|27267_27702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002194828.1|27723_28383_+	Rha family transcriptional regulator	NA	NA	NA	NA	NA
WP_002194827.1|28470_29232_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B1P7G0	Bacillus_phage	85.4	3.6e-125
WP_002194826.1|29231_29438_-	hypothetical protein	NA	D2XR32	Bacillus_phage	90.9	3.8e-29
WP_002194825.1|29439_29676_-	hemolysin XhlA family protein	NA	A0A1B1P887	Bacillus_phage	63.2	1.0e-17
WP_002194824.1|29714_35312_-|tail	phage tail protein	tail	D2XR28	Bacillus_phage	44.8	0.0e+00
WP_001979293.1|35311_36790_-|tail	phage tail family protein	tail	A0A1B1P894	Bacillus_phage	87.6	4.5e-265
WP_038415774.1|36837_40545_-	carbamoyl phosphate synthase large subunit	NA	D2XPZ4	Bacillus_virus	90.6	0.0e+00
WP_001981074.1|40537_41203_-	hypothetical protein	NA	D2XPZ3	Bacillus_virus	79.7	6.0e-92
WP_001980922.1|41214_41619_-	hypothetical protein	NA	A0A1B1P876	Bacillus_phage	67.2	1.4e-43
WP_001980920.1|41700_42144_-	hypothetical protein	NA	B5LPS0	Bacillus_virus	81.3	3.8e-50
WP_038357041.1|42148_42568_-	hypothetical protein	NA	B5LPR9	Bacillus_virus	84.9	2.8e-63
WP_001980918.1|42607_43219_-	hypothetical protein	NA	D2XPY9	Bacillus_virus	99.0	8.7e-122
WP_038357040.1|43280_43631_-	hypothetical protein	NA	D2XPY8	Bacillus_virus	97.0	3.5e-51
WP_001980916.1|43627_43984_-	hypothetical protein	NA	D2XPY7	Bacillus_virus	93.2	3.4e-62
WP_001980913.1|43980_44382_-	hypothetical protein	NA	D2XPY6	Bacillus_virus	96.2	4.3e-69
WP_001980911.1|44390_44630_-	hypothetical protein	NA	B5LPR5	Bacillus_virus	68.4	4.2e-24
WP_001980909.1|44683_45580_-	hypothetical protein	NA	D2XPY5	Bacillus_virus	95.0	5.3e-160
WP_001980906.1|45654_46305_-	hypothetical protein	NA	D2XPY4	Bacillus_virus	82.5	1.6e-81
WP_033691990.1|46306_46570_-	hypothetical protein	NA	A0A1B1P7N4	Bacillus_phage	78.0	2.2e-34
WP_033691940.1|46751_47030_-	hypothetical protein	NA	A0A142F1A2	Bacillus_phage	47.4	4.6e-14
WP_001980900.1|47026_47287_-	DUF2829 domain-containing protein	NA	S5MAK7	Bacillus_phage	70.7	4.8e-29
WP_001980897.1|47298_48426_-|capsid	phage minor capsid protein	capsid	B5LPR2	Bacillus_virus	66.9	8.5e-139
WP_033691938.1|48429_49941_-|portal	phage portal protein	portal	D2XPY0	Bacillus_virus	89.4	3.3e-247
WP_001981247.1|49951_51229_-|terminase	PBSX family phage terminase large subunit	terminase	D2XPX9	Bacillus_virus	92.5	9.3e-243
WP_001981248.1|51209_52112_-|terminase	terminase small subunit	terminase	B5LPQ9	Bacillus_virus	82.1	7.3e-117
>prophage 1
NZ_CP009940	Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence	209381	73272	134397	209381	transposase	Bacillus_phage(70.0%)	38	NA	NA
WP_000104999.1|73272_74157_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_033691500.1|74947_75178_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001971661.1|75804_76971_+	DNA translocase FtsK	NA	A0A0S2GLG9	Bacillus_phage	78.9	1.9e-178
WP_033691505.1|76993_77569_+	replication-relaxation family protein	NA	W8CZ47	Bacillus_phage	75.1	3.3e-83
WP_001971650.1|78823_79306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001971648.1|79302_81018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171982051.1|82793_83393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001971643.1|83553_83757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171982052.1|83960_86465_-	SEC-C domain-containing protein	NA	NA	NA	NA	NA
WP_050484045.1|86900_89633_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_001971638.1|89681_90494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142244204.1|90529_90967_-	AAA family ATPase	NA	A0A1U9WR94	Streptococcus_virus	51.9	8.3e-26
WP_001971630.1|91217_92339_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	S6AND0	Bacillus_phage	79.4	1.9e-167
WP_001971624.1|92966_94250_+	DUF2325 domain-containing protein	NA	NA	NA	NA	NA
WP_033691504.1|96269_96488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000435025.1|98295_98478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038356955.1|101810_102071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142244189.1|102211_103401_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	36.0	3.0e-33
WP_052149533.1|106068_106329_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_144318822.1|106267_106972_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_001971604.1|106996_108304_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_001971602.1|108388_109123_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_001971598.1|109207_110179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038356954.1|110248_111067_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_001971591.1|112588_113503_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001971589.1|114078_114819_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_050412755.1|114850_115480_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	35.0	7.8e-25
WP_001971585.1|116136_117024_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	55.8	7.0e-80
WP_001971583.1|117023_117695_+	sugar transferase	NA	NA	NA	NA	NA
WP_038356952.1|117786_118833_+	N-acetylneuraminate synthase family protein	NA	NA	NA	NA	NA
WP_001971578.1|118858_120004_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA	NA
WP_001971576.1|120017_120725_+	acylneuraminate cytidylyltransferase family protein	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	31.2	4.8e-15
WP_001971574.1|120721_121996_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_142244192.1|122217_122478_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA	NA
WP_142244188.1|124599_124983_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_038356951.1|126967_128656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142244187.1|131392_132588_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.1	6.8e-38
WP_001971551.1|133950_134397_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	40.8	4.4e-22
