assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000814205.1_ASM81420v1	NZ_CP010377	Enterobacter hormaechei subsp. hormaechei strain 34983 chromosome, complete genome	1	1581650-1581917	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas3,DEDDh,WYL,DinG,RT	Orphan	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	3,4,4	4	Orphan	csa3,cas3,DEDDh,WYL,DinG,RT,PD-DExK	NA,NA|58aa|down_5|NZ_CP010377.1_1589591_1589765_+	NA|337aa|up_9|NZ_CP010377.1_1566839_1567850_+	pfam03934, T2SSK, Type II secretion system (T2SS), protein K	NA|378aa|up_8|NZ_CP010377.1_1567865_1568999_+	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|162aa|up_7|NZ_CP010377.1_1568995_1569481_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|266aa|up_6|NZ_CP010377.1_1569477_1570275_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|904aa|up_5|NZ_CP010377.1_1570534_1573246_+	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|147aa|up_4|NZ_CP010377.1_1573350_1573791_+	PRK15328, PRK15328, type III secretion system invasion protein IagB	NA|338aa|up_3|NZ_CP010377.1_1575871_1576885_-	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|479aa|up_2|NZ_CP010377.1_1576977_1578414_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|334aa|up_1|NZ_CP010377.1_1578424_1579426_-	PRK10534, PRK10534, L-threonine aldolase; Provisional	NA|573aa|up_0|NZ_CP010377.1_1579464_1581183_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|323aa|down_0|NZ_CP010377.1_1582151_1583120_-	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional	NA|551aa|down_1|NZ_CP010377.1_1583130_1584783_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|down_2|NZ_CP010377.1_1584927_1585827_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|down_3|NZ_CP010377.1_1586003_1586699_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|down_4|NZ_CP010377.1_1586990_1588649_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|58aa|down_5|NZ_CP010377.1_1589591_1589765_+	NA	NA|372aa|down_6|NZ_CP010377.1_1589761_1590877_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|647aa|down_7|NZ_CP010377.1_1590873_1592814_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|74aa|down_8|NZ_CP010377.1_1592884_1593106_-	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|107aa|down_9|NZ_CP010377.1_1593373_1593694_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed
GCF_000814205.1_ASM81420v1	NZ_CP010377	Enterobacter hormaechei subsp. hormaechei strain 34983 chromosome, complete genome	2	1597096-1597249	2,2	PILER-CR,CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,RT	Orphan	CGTTTATGTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	35,28	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	csa3,cas3,DEDDh,WYL,DinG,RT,PD-DExK	NA|58aa|up_6|NZ_CP010377.1_1589591_1589765_+,NA|148aa|up_0|NZ_CP010377.1_1596481_1596925_+,NA	NA|300aa|up_9|NZ_CP010377.1_1584927_1585827_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_8|NZ_CP010377.1_1586003_1586699_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_7|NZ_CP010377.1_1586990_1588649_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|58aa|up_6|NZ_CP010377.1_1589591_1589765_+	NA	NA|372aa|up_5|NZ_CP010377.1_1589761_1590877_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|647aa|up_4|NZ_CP010377.1_1590873_1592814_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|74aa|up_3|NZ_CP010377.1_1592884_1593106_-	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|107aa|up_2|NZ_CP010377.1_1593373_1593694_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|760aa|up_1|NZ_CP010377.1_1593721_1596001_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|148aa|up_0|NZ_CP010377.1_1596481_1596925_+	NA	NA|73aa|down_0|NZ_CP010377.1_1597421_1597640_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP010377.1_1597924_1598629_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP010377.1_1598674_1600396_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP010377.1_1600395_1602162_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|323aa|down_4|NZ_CP010377.1_1602276_1603245_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP010377.1_1603788_1604283_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1221aa|down_6|NZ_CP010377.1_1604418_1608081_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|205aa|down_7|NZ_CP010377.1_1608208_1608823_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP010377.1_1608832_1610176_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP010377.1_1610268_1611561_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
GCF_000814205.1_ASM81420v1	NZ_CP010377	Enterobacter hormaechei subsp. hormaechei strain 34983 chromosome, complete genome	3	1972115-1972238	3	CRISPRCasFinder	no	DEDDh	csa3,cas3,DEDDh,WYL,DinG,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,RT,PD-DExK	NA|47aa|up_4|NZ_CP010377.1_1966672_1966813_-,NA|30aa|down_6|NZ_CP010377.1_1979667_1979757_+	NA|229aa|up_9|NZ_CP010377.1_1961587_1962274_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|249aa|up_8|NZ_CP010377.1_1962257_1963004_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|272aa|up_7|NZ_CP010377.1_1963003_1963819_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|277aa|up_6|NZ_CP010377.1_1963820_1964651_-	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold	NA|469aa|up_5|NZ_CP010377.1_1965208_1966615_+	pfam09362, DUF1996, Domain of unknown function (DUF1996)	NA|47aa|up_4|NZ_CP010377.1_1966672_1966813_-	NA	NA|261aa|up_3|NZ_CP010377.1_1966938_1967721_+	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	NA|212aa|up_2|NZ_CP010377.1_1967793_1968429_+	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|532aa|up_1|NZ_CP010377.1_1968455_1970051_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|183aa|up_0|NZ_CP010377.1_1970719_1971268_-	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown]	NA|458aa|down_0|NZ_CP010377.1_1972398_1973772_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_1|NZ_CP010377.1_1973997_1974639_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_2|NZ_CP010377.1_1974670_1975819_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|395aa|down_3|NZ_CP010377.1_1976117_1977302_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|304aa|down_4|NZ_CP010377.1_1977415_1978327_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP010377.1_1978344_1979370_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP010377.1_1979667_1979757_+	NA	NA|389aa|down_7|NZ_CP010377.1_1979918_1981085_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP010377.1_1981122_1981704_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|253aa|down_9|NZ_CP010377.1_1981826_1982585_-	pfam00877, NLPC_P60, NlpC/P60 family
GCF_000814205.1_ASM81420v1	NZ_CP010377	Enterobacter hormaechei subsp. hormaechei strain 34983 chromosome, complete genome	4	2096450-2096558	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,RT	Orphan	CTCTTTATATATACTTCCTTAATTCCT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,RT,PD-DExK	NA|105aa|up_5|NZ_CP010377.1_2090533_2090848_+,NA|123aa|down_0|NZ_CP010377.1_2096690_2097059_+,NA|172aa|down_1|NZ_CP010377.1_2097489_2098005_+,NA|167aa|down_2|NZ_CP010377.1_2097994_2098495_+,NA|165aa|down_3|NZ_CP010377.1_2098815_2099310_+,NA|330aa|down_4|NZ_CP010377.1_2099394_2100384_+	NA|395aa|up_9|NZ_CP010377.1_2086361_2087546_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|376aa|up_8|NZ_CP010377.1_2087604_2088732_-	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|295aa|up_7|NZ_CP010377.1_2088846_2089731_+	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|226aa|up_6|NZ_CP010377.1_2089817_2090495_+	PRK13757, PRK13757, type A chloramphenicol O-acetyltransferase	NA|105aa|up_5|NZ_CP010377.1_2090533_2090848_+	NA	NA|104aa|up_4|NZ_CP010377.1_2090960_2091272_-	pfam07130, YebG, YebG protein	NA|205aa|up_3|NZ_CP010377.1_2091381_2091996_-	PRK11621, PRK11621, Tat proofreading chaperone DmsD	NA|285aa|up_2|NZ_CP010377.1_2092040_2092895_-	pfam04976, DmsC, DMSO reductase anchor subunit (DmsC)	NA|389aa|up_1|NZ_CP010377.1_2093524_2094691_-	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|527aa|up_0|NZ_CP010377.1_2094616_2096197_+	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|123aa|down_0|NZ_CP010377.1_2096690_2097059_+	NA	NA|172aa|down_1|NZ_CP010377.1_2097489_2098005_+	NA	NA|167aa|down_2|NZ_CP010377.1_2097994_2098495_+	NA	NA|165aa|down_3|NZ_CP010377.1_2098815_2099310_+	NA	NA|330aa|down_4|NZ_CP010377.1_2099394_2100384_+	NA	NA|490aa|down_5|NZ_CP010377.1_2101069_2102539_-	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|102aa|down_6|NZ_CP010377.1_2102669_2102975_-	pfam06649, DUF1161, Protein of unknown function (DUF1161)	NA|284aa|down_7|NZ_CP010377.1_2103077_2103929_-	pfam04724, Glyco_transf_17, Glycosyltransferase family 17	NA|237aa|down_8|NZ_CP010377.1_2104122_2104833_+	PRK02939, PRK02939, YnfC family lipoprotein	NA|187aa|down_9|NZ_CP010377.1_2104850_2105411_-	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional
GCF_000814205.1_ASM81420v1	NZ_CP010377	Enterobacter hormaechei subsp. hormaechei strain 34983 chromosome, complete genome	5	3296546-3296646	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,RT	Orphan	CCATCTCTACCCGCTGGGCCAGTTGCGCCGTCTTTACC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,RT,PD-DExK	NA|117aa|up_5|NZ_CP010377.1_3290524_3290875_+,NA|154aa|up_1|NZ_CP010377.1_3294119_3294581_-,NA	NA|526aa|up_9|NZ_CP010377.1_3284804_3286382_-	PRK00074, guaA, GMP synthase; Reviewed	NA|489aa|up_8|NZ_CP010377.1_3286448_3287915_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|458aa|up_7|NZ_CP010377.1_3288073_3289447_+	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|340aa|up_6|NZ_CP010377.1_3289505_3290525_+	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease	NA|117aa|up_5|NZ_CP010377.1_3290524_3290875_+	NA	NA|74aa|up_4|NZ_CP010377.1_3290871_3291093_-	pfam07191, zinc-ribbons_6, zinc-ribbons	NA|345aa|up_3|NZ_CP010377.1_3291143_3292178_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|515aa|up_2|NZ_CP010377.1_3292236_3293781_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|154aa|up_1|NZ_CP010377.1_3294119_3294581_-	NA	NA|333aa|up_0|NZ_CP010377.1_3294637_3295636_-	PRK10159, PRK10159, phosphoporin PhoE	NA|491aa|down_0|NZ_CP010377.1_3299535_3301008_-	PRK00093, PRK00093, GTP-binding protein Der; Reviewed	NA|393aa|down_1|NZ_CP010377.1_3301120_3302299_-	PRK11138, PRK11138, outer membrane biogenesis protein BamB; Provisional	NA|207aa|down_2|NZ_CP010377.1_3302309_3302930_-	COG2976, COG2976, Uncharacterized protein conserved in bacteria [Function unknown]	NA|425aa|down_3|NZ_CP010377.1_3302943_3304218_-	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|373aa|down_4|NZ_CP010377.1_3304299_3305418_-	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA|334aa|down_5|NZ_CP010377.1_3305444_3306446_-	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|389aa|down_6|NZ_CP010377.1_3306737_3307904_-	PRK11194, PRK11194, ribosomal RNA large subunit methyltransferase N; Provisional	NA|144aa|down_7|NZ_CP010377.1_3308051_3308483_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|292aa|down_8|NZ_CP010377.1_3308607_3309483_-	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|260aa|down_9|NZ_CP010377.1_3309482_3310262_-	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]
GCF_000814205.1_ASM81420v1	NZ_CP010378	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-59.134kb, complete sequence	1	51302-51429	1	PILER-CR	no			Orphan	CCGGCTCTTTCTGTATTGTGCAATACAG	28	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,DEDDh,WYL,DinG,RT,PD-DExK	NA|177aa|up_9|NZ_CP010378.1_44659_45190_+,NA|90aa|up_7|NZ_CP010378.1_47323_47593_+,NA|67aa|up_6|NZ_CP010378.1_47634_47835_+,NA|61aa|up_3|NZ_CP010378.1_49447_49630_+,NA|68aa|up_2|NZ_CP010378.1_49688_49892_-,NA|98aa|up_1|NZ_CP010378.1_50100_50394_-,NA|239aa|up_0|NZ_CP010378.1_50471_51188_-,NA|73aa|down_0|NZ_CP010378.1_52301_52520_+,NA|222aa|down_3|NZ_CP010378.1_57271_57937_+,NA|121aa|down_4|NZ_CP010378.1_57929_58292_+	NA|177aa|up_9|NZ_CP010378.1_44659_45190_+	NA	NA|264aa|up_8|NZ_CP010378.1_46363_47155_+	pfam18847, LPD29, Large polyvalent protein associated domain 29	NA|90aa|up_7|NZ_CP010378.1_47323_47593_+	NA	NA|67aa|up_6|NZ_CP010378.1_47634_47835_+	NA	NA|166aa|up_5|NZ_CP010378.1_47889_48387_+	pfam05443, ROS_MUCR, ROS/MUCR transcriptional regulator protein	NA|69aa|up_4|NZ_CP010378.1_49166_49373_+	pfam06006, DUF905, Bacterial protein of unknown function (DUF905)	NA|61aa|up_3|NZ_CP010378.1_49447_49630_+	NA	NA|68aa|up_2|NZ_CP010378.1_49688_49892_-	NA	NA|98aa|up_1|NZ_CP010378.1_50100_50394_-	NA	NA|239aa|up_0|NZ_CP010378.1_50471_51188_-	NA	NA|73aa|down_0|NZ_CP010378.1_52301_52520_+	NA	NA|511aa|down_1|NZ_CP010378.1_52519_54052_+	cd01127, TrwB, Bacterial conjugation protein TrwB,  ATP binding domain	NA|1073aa|down_2|NZ_CP010378.1_54056_57275_+	pfam08751, TrwC, TrwC relaxase	NA|222aa|down_3|NZ_CP010378.1_57271_57937_+	NA	NA|121aa|down_4|NZ_CP010378.1_57929_58292_+	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
