assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000816065.1_ASM81606v1	NZ_CP007003	Trueperella pyogenes TP8, complete genome	1	854954-855040	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,cas4,WYL,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GTAAATGTCCGATTGTTGACAAG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,cas4,WYL,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|338aa|up_8|NZ_CP007003.1_845016_846030_+,NA|144aa|up_6|NZ_CP007003.1_846823_847255_+,NA|133aa|up_5|NZ_CP007003.1_847254_847653_+,NA|284aa|up_2|NZ_CP007003.1_849673_850525_-,NA|233aa|down_2|NZ_CP007003.1_857255_857954_+,NA|87aa|down_5|NZ_CP007003.1_859311_859572_+,NA|335aa|down_8|NZ_CP007003.1_862559_863564_+,NA|61aa|down_9|NZ_CP007003.1_863539_863722_+	NA|92aa|up_9|NZ_CP007003.1_844537_844813_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|338aa|up_8|NZ_CP007003.1_845016_846030_+	NA	NA|62aa|up_7|NZ_CP007003.1_846338_846524_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|144aa|up_6|NZ_CP007003.1_846823_847255_+	NA	NA|133aa|up_5|NZ_CP007003.1_847254_847653_+	NA	NA|385aa|up_4|NZ_CP007003.1_847649_848804_+	pfam10926, DUF2800, Protein of unknown function (DUF2800)	NA|189aa|up_3|NZ_CP007003.1_848806_849373_+	pfam10991, DUF2815, Protein of unknown function (DUF2815)	NA|284aa|up_2|NZ_CP007003.1_849673_850525_-	NA	NA|646aa|up_1|NZ_CP007003.1_850607_852545_+	cd08642, DNA_pol_A_pol_I_A, Polymerase I functions primarily to fill DNA gaps that arise during DNA repair, recombination and replication	NA|800aa|up_0|NZ_CP007003.1_852548_854948_+	pfam05272, VirE, Virulence-associated protein E	NA|94aa|down_0|NZ_CP007003.1_855260_855542_+	smart00990, VRR_NUC, This model contains proteins with the VRR-NUC domain	NA|452aa|down_1|NZ_CP007003.1_855522_856878_+	cd18013, DEXQc_bact_SNF2, DEXQ-box helicase domain of bacterial SNF2 family proteins	NA|233aa|down_2|NZ_CP007003.1_857255_857954_+	NA	NA|168aa|down_3|NZ_CP007003.1_858177_858681_+	pfam10097, DUF2335, Predicted membrane protein (DUF2335)	NA|101aa|down_4|NZ_CP007003.1_858811_859114_+	pfam14279, HNH_5, HNH endonuclease	NA|87aa|down_5|NZ_CP007003.1_859311_859572_+	NA	NA|498aa|down_6|NZ_CP007003.1_859525_861019_+	pfam03237, Terminase_6, Terminase-like family	NA|476aa|down_7|NZ_CP007003.1_861015_862443_+	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like	NA|335aa|down_8|NZ_CP007003.1_862559_863564_+	NA	NA|61aa|down_9|NZ_CP007003.1_863539_863722_+	NA
GCF_000816065.1_ASM81606v1	NZ_CP007003	Trueperella pyogenes TP8, complete genome	2	1865525-1867309	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,DEDDh,csa3,cas4,WYL,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	GGCTCATCCCCGCCTGCGCGGGGACCAC,GGCTCATCCCCGCCTGCGCGGGGACCAC,GGCTCATCCCCGCCTGCGCGGGGACCAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	29,29,28	29	TypeI-E	cas3,DEDDh,csa3,cas4,WYL,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|911aa|up_9|NZ_CP007003.1_1852757_1855490_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|143aa|up_8|NZ_CP007003.1_1855747_1856176_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|434aa|up_7|NZ_CP007003.1_1856490_1857792_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|425aa|up_6|NZ_CP007003.1_1857876_1859151_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|299aa|up_5|NZ_CP007003.1_1859153_1860050_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|292aa|up_4|NZ_CP007003.1_1860058_1860934_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|566aa|up_3|NZ_CP007003.1_1860987_1862685_+	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|206aa|up_2|NZ_CP007003.1_1862946_1863564_+	pfam01381, HTH_3, Helix-turn-helix	NA|296aa|up_1|NZ_CP007003.1_1863730_1864618_+	pfam07751, Abi_2, Abi-like protein	NA|107aa|up_0|NZ_CP007003.1_1865033_1865354_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	cas2|115aa|down_0|NZ_CP007003.1_1867483_1867828_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|311aa|down_1|NZ_CP007003.1_1867832_1868765_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|NZ_CP007003.1_1868767_1869436_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|235aa|down_3|NZ_CP007003.1_1869435_1870140_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|381aa|down_4|NZ_CP007003.1_1870143_1871286_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|215aa|down_5|NZ_CP007003.1_1871295_1871940_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|566aa|down_6|NZ_CP007003.1_1871966_1873664_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|952aa|down_7|NZ_CP007003.1_1873945_1876801_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|314aa|down_8|NZ_CP007003.1_1878468_1879410_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|385aa|down_9|NZ_CP007003.1_1879707_1880862_+	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism]
