The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	55483	65353	2860508	transposase	Staphylococcus_phage(66.67%)	8	NA	NA
WP_000190900.1|55483_56998_-	SAM-dependent DNA methyltransferase	NA	A0A2H4PQP4	Staphylococcus_phage	30.6	8.9e-51
WP_000899483.1|57182_58058_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_017804527.1|58154_59327_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000393259.1|59383_59776_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001028144.1|59776_61216_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_001837690.1|61345_62518_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	99.6	1.3e-134
WP_000998228.1|62722_63271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001275630.1|63493_65353_+	site-specific DNA-methyltransferase	NA	A0A2R3ZYF2	Campylobacter_phage	34.6	5.8e-44
>prophage 2
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	642364	713099	2860508	holin,tRNA,integrase,portal,plate,transposase,tail,terminase,head,capsid	Staphylococcus_phage(68.66%)	96	687442:687458	717868:717884
WP_040968655.1|642364_643741_-	recombinase family protein	NA	A8R7E9	Staphylococcus_phage	98.9	1.4e-260
WP_040968656.1|643798_644728_-	DUF5067 domain-containing protein	NA	Q4ZAM2	Staphylococcus_virus	99.4	2.9e-137
WP_031887091.1|644746_645205_-	toxin	NA	B2ZYU2	Staphylococcus_phage	99.3	4.5e-83
WP_000455972.1|645226_645553_-	helix-turn-helix transcriptional regulator	NA	A0A059T5A2	Staphylococcus_phage	100.0	7.0e-54
WP_001114715.1|645715_645925_+	helix-turn-helix transcriptional regulator	NA	A0A059T617	Staphylococcus_phage	100.0	4.8e-32
WP_040968663.1|645963_646647_+	ORF6C domain-containing protein	NA	A9CR56	Staphylococcus_phage	86.9	1.2e-108
WP_031782757.1|646756_646927_+	DUF1270 domain-containing protein	NA	B2ZYU9	Staphylococcus_phage	96.4	8.2e-22
WP_040968664.1|646931_647246_+	helix-turn-helix transcriptional regulator	NA	I1W620	Staphylococcus_phage	99.0	1.1e-51
WP_000165371.1|647310_647613_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_040968667.1|647617_647878_+	DUF1108 family protein	NA	A0A068A219	Staphylococcus_phage	98.8	2.0e-43
WP_000815403.1|647887_648109_+	DUF2483 family protein	NA	A0A1X9H047	Staphylococcus_phage	100.0	1.2e-33
WP_000134097.1|648101_648890_+	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	100.0	2.6e-142
WP_040968668.1|648918_649470_+	hypothetical protein	NA	Q4ZBM4	Staphylococcus_phage	99.5	7.6e-101
WP_040968669.1|649482_650148_+	hypothetical protein	NA	Q9G025	Staphylococcus_virus	98.2	1.2e-124
WP_040968670.1|650147_650930_+	AP2 domain-containing protein	NA	A0A2I6PDA5	Staphylococcus_phage	98.0	4.1e-140
WP_000504982.1|650901_651705_+	phage replisome organizer N-terminal domain-containing protein	NA	A0A1X9H0K3	Staphylococcus_phage	100.0	7.9e-115
WP_000803070.1|651714_652494_+	ATP-binding protein	NA	A0A1X9H042	Staphylococcus_phage	100.0	1.4e-145
WP_000256594.1|652487_652646_+	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	98.1	4.5e-22
WP_001123695.1|652658_652880_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000049798.1|652889_653294_+	DUF1064 domain-containing protein	NA	G4KNP2	Staphylococcus_phage	100.0	1.6e-68
WP_031873777.1|653298_653484_+	DUF3113 family protein	NA	Q4ZA46	Staphylococcus_virus	98.4	2.1e-26
WP_040968671.1|653484_653844_+	phage protein	NA	B7T0B4	Staphylococcus_virus	69.0	3.9e-37
WP_040968672.1|653847_654090_+	phage protein	NA	A0A1P8L6E3	Staphylococcus_phage	98.8	1.5e-40
WP_040968673.1|654103_654505_+	hypothetical protein	NA	A0A0H4IPW3	Staphylococcus_phage	78.9	1.2e-52
WP_040968675.1|654692_655118_+	hypothetical protein	NA	A0A2I6PE09	Staphylococcus_phage	99.3	6.3e-79
WP_025920876.1|655131_655416_+	hypothetical protein	NA	Q9G014	Staphylococcus_virus	94.7	8.3e-43
WP_001065083.1|655408_655657_+	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
WP_017804563.1|655649_656159_+	dUTP diphosphatase	NA	M9NS45	Staphylococcus_phage	97.6	6.2e-89
WP_001804400.1|656219_656480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000195803.1|656738_656945_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592207.1|656941_657328_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000595257.1|657324_657498_+	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_000990005.1|657498_657645_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_000162696.1|657668_658091_+	RinA family phage transcriptional activator	NA	S4V7K2	Staphylococcus_phage	100.0	1.6e-74
WP_040968676.1|658277_658718_+|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	98.6	4.1e-73
WP_000169945.1|658704_659982_+|terminase	PBSX family phage terminase large subunit	terminase	S4V685	Staphylococcus_phage	100.0	1.3e-249
WP_031768183.1|659992_661528_+|portal	phage portal protein	portal	Q4ZDV9	Staphylococcus_virus	99.8	2.9e-291
WP_040968677.1|661534_662530_+|capsid	minor capsid protein	capsid	E0Y3K7	Staphylococcus_virus	97.9	1.6e-181
WP_191239423.1|662611_662785_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	89.7	1.1e-05
WP_040968678.1|662916_663531_+	DUF4355 domain-containing protein	NA	I1W646	Staphylococcus_phage	98.0	6.0e-38
WP_000438500.1|663544_664519_+|capsid	phage major capsid protein	capsid	B7T0D2	Staphylococcus_virus	99.7	1.8e-182
WP_001114086.1|664540_664828_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
WP_040968679.1|664836_665169_+|head,tail	phage head-tail connector protein	head,tail	E0Y3L2	Staphylococcus_virus	99.1	2.7e-53
WP_001268304.1|665165_665468_+	hypothetical protein	NA	E0Y3L3	Staphylococcus_virus	96.0	2.8e-49
WP_001017811.1|665467_665815_+	HK97 gp10 family phage protein	NA	I1W643	Staphylococcus_phage	100.0	5.3e-60
WP_040968680.1|665826_666210_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	99.2	5.9e-68
WP_000002581.1|666228_666810_+|tail	phage major tail protein, TP901-1 family	tail	A0EWT6	Staphylococcus_virus	99.5	7.0e-105
WP_001100161.1|666872_667238_+|tail	tail assembly chaperone	tail	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000105584.1|667267_667612_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_040968681.1|667628_671096_+	membrane protein	NA	A1KX38	Staphylococcus_virus	98.9	1.6e-244
WP_001557971.1|671108_672056_+|tail	phage tail family protein	tail	Q8SDT6	Staphylococcus_phage	99.7	6.1e-183
WP_017804572.1|672064_673966_+|tail	phage tail protein	tail	I1W634	Staphylococcus_phage	99.8	0.0e+00
WP_029264593.1|673980_675891_+	hypothetical protein	NA	B2ZYZ7	Staphylococcus_phage	99.7	0.0e+00
WP_029549539.1|675890_677714_+|plate	phage baseplate upper protein	plate	Q4ZDD5	Staphylococcus_virus	96.9	4.7e-288
WP_040968682.1|677713_678091_+	DUF2977 domain-containing protein	NA	A0A2H4PQW4	Staphylococcus_phage	99.2	1.2e-60
WP_015990323.1|678100_678274_+	XkdX family protein	NA	B2ZZ00	Staphylococcus_phage	100.0	1.0e-27
WP_000466785.1|678314_678614_+	DUF2951 family protein	NA	A0EWU6	Staphylococcus_virus	91.9	1.9e-42
WP_040968683.1|678750_680649_+	glucosaminidase domain-containing protein	NA	Q4ZDD0	Staphylococcus_virus	99.4	0.0e+00
WP_017804578.1|680661_681900_+|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	98.8	5.0e-209
WP_000398874.1|681904_682300_+	hypothetical protein	NA	A1KX48	Staphylococcus_virus	100.0	2.7e-68
WP_040968684.1|682355_682793_+|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	99.3	1.5e-72
WP_040968685.1|682773_684219_+	SH3 domain-containing protein	NA	A0EWV1	Staphylococcus_virus	99.6	3.1e-295
WP_031807127.1|684273_684528_+	hypothetical protein	NA	A0A0K1LKD1	Staphylococcus_phage	97.6	3.8e-39
WP_000125170.1|685009_685216_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	100.0	3.4e-30
WP_000498229.1|685229_685430_+	hypothetical protein	NA	A0A2H4PQS9	Staphylococcus_phage	100.0	3.5e-32
WP_001047239.1|685613_686054_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_001788276.1|686111_686213_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000020801.1|686678_688085_+|transposase	transposase	transposase	NA	NA	NA	NA
687442:687458	attL	AATATATAAATGACAAT	NA	NA	NA	NA
WP_000882101.1|688088_688709_+	DUF443 family protein	NA	NA	NA	NA	NA
WP_001793603.1|688839_689481_+	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000882138.1|689527_690157_+	DUF443 family protein	NA	NA	NA	NA	NA
WP_000923036.1|690609_691239_+	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000882184.1|691362_692004_+	DUF443 family protein	NA	NA	NA	NA	NA
WP_000882123.1|692040_692676_+	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_001547808.1|692641_692887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000808902.1|693805_694744_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_000633782.1|694954_695491_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_000477505.1|695659_696136_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000180239.1|696175_697471_+	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
WP_001788287.1|697498_698020_+	YwhD family protein	NA	NA	NA	NA	NA
WP_001200753.1|698519_699530_+	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.5e-33
WP_000359086.1|699805_700222_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_001021140.1|700218_701880_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000901764.1|702270_702906_+	endonuclease III domain-containing protein	NA	NA	NA	NA	NA
WP_000749059.1|703218_704106_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_078064929.1|704253_705204_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_000365354.1|705258_705978_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000362969.1|705961_706762_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000735551.1|706897_707404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001222133.1|707565_708282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001045423.1|708450_709239_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001018677.1|709489_709864_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_001829093.1|710811_711741_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000169045.1|711935_712160_-	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_000036088.1|712176_712380_-	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_001044915.1|712538_713099_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
717868:717884	attR	ATTGTCATTTATATATT	NA	NA	NA	NA
>prophage 3
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	797585	805405	2860508		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|797585_798641_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|798640_799327_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|799301_799775_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|800116_800557_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|800836_801421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|801519_802233_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|802236_802656_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|802657_803326_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|803676_804270_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217802.1|804253_805405_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	1.2e-23
>prophage 4
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	817377	831719	2860508		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663037.1|817377_818436_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.3	1.5e-20
WP_000197271.1|818730_819273_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|819897_820815_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031797439.1|820904_821006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|821083_822589_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|822929_823430_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|823449_824316_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|825116_825515_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|825477_827583_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|827700_828672_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|828852_829008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|829046_830018_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|830004_830961_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|830957_831719_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 5
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	882483	901626	2860508	terminase,integrase,coat	Staphylococcus_phage(71.43%)	24	874624:874640	901653:901669
874624:874640	attL	TAAAGATAAAGCACAAG	NA	NA	NA	NA
WP_001050043.1|882483_884856_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.0	1.7e-93
WP_001085185.1|884877_885342_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
WP_000149511.1|885904_887011_-|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	44.4	1.1e-77
WP_000358990.1|887000_887804_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JC02	uncultured_Caudovirales_phage	55.9	5.3e-10
WP_001045296.1|887939_888143_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000163544.1|888178_888397_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000784885.1|888408_888555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058492.1|888547_888757_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	95.7	7.7e-30
WP_001103939.1|888759_889077_+	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	57.0	3.2e-19
WP_001002717.1|889140_890010_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	95.8	8.7e-160
WP_000390453.1|890026_891484_+	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	95.9	6.6e-277
WP_001039170.1|891784_892147_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	98.3	3.4e-65
WP_000998185.1|892148_892433_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	98.9	7.7e-49
WP_001019807.1|892429_893071_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	92.0	5.5e-111
WP_001288441.1|893780_894125_+	hypothetical protein	NA	A0A1W6JQF3	Staphylococcus_phage	100.0	1.4e-57
WP_000856046.1|894159_894738_+	hypothetical protein	NA	A0A1W6JQG0	Staphylococcus_phage	95.8	7.8e-80
WP_001160678.1|894737_894914_+	hypothetical protein	NA	A0A1W6JQJ5	Staphylococcus_phage	100.0	7.7e-23
WP_000777464.1|894966_895494_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	98.9	1.1e-88
WP_072326620.1|895625_895838_+	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	88.6	5.1e-29
WP_001293071.1|895834_896404_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.4	4.6e-101
WP_000801979.1|896680_897649_+	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
WP_001035612.1|897845_898400_-	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	67.2	4.2e-59
WP_001043552.1|899183_899984_+	staphylococcal enterotoxin type C2	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.4	3.1e-50
WP_000868795.1|901128_901626_+	trimethoprim-resistant dihydrofolate reductase DfrG	NA	G3MBI7	Bacillus_virus	49.1	4.0e-40
901653:901669	attR	TAAAGATAAAGCACAAG	NA	NA	NA	NA
>prophage 6
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1021379	1073394	2860508	bacteriocin,protease,tRNA	Streptococcus_phage(33.33%)	52	NA	NA
WP_000448941.1|1021379_1022369_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|1022663_1023059_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|1023429_1024149_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959292.1|1024269_1025256_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|1025303_1027112_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|1027571_1028378_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214070.1|1028400_1028766_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224619.1|1028869_1029463_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242103.1|1029648_1029996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|1030012_1030648_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|1030664_1031474_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669924.1|1031470_1032325_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|1032345_1033731_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|1033740_1035585_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|1035862_1036633_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|1036829_1037915_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_017328457.1|1038256_1039825_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_001288675.1|1039969_1040728_+	esterase family protein	NA	NA	NA	NA	NA
WP_000600387.1|1040921_1041431_+	YjcG family protein	NA	NA	NA	NA	NA
WP_001154223.1|1041543_1042734_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258645.1|1042711_1043887_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340119.1|1044319_1045804_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|1045784_1046045_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049950.1|1046044_1047607_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
WP_000928413.1|1047908_1048712_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001795272.1|1048930_1051255_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000021865.1|1051271_1052630_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414165.1|1052768_1054280_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1054766_1055336_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1055545_1055764_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668818.1|1055844_1056831_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1057029_1057206_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033865.1|1057220_1057823_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_031763719.1|1058738_1058840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797239.1|1058849_1059122_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870829.1|1059165_1061130_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668627.1|1061132_1061453_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571167.1|1061449_1062091_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_001795266.1|1062178_1062469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001792054.1|1062609_1062747_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|1062835_1063192_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|1063679_1064639_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|1064684_1064816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|1064879_1065095_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620949.1|1065259_1065811_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|1065862_1066801_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190622.1|1066982_1068344_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526694.1|1068330_1070004_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150197.1|1069990_1070794_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184945.1|1070786_1071608_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284458.1|1071845_1072175_-	staphostatin B	NA	NA	NA	NA	NA
WP_001089094.1|1072212_1073394_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 7
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1093489	1101962	2860508		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|1093489_1093972_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010413.1|1093958_1095083_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1095086_1095791_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1095790_1096054_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|1096055_1096727_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032733.1|1096719_1098909_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	2.7e-141
WP_000483713.1|1098887_1100372_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030811.1|1100364_1101393_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238659.1|1101395_1101962_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.7	3.2e-30
>prophage 8
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1442188	1482666	2860508	lysis,integrase,transposase	Staphylococcus_phage(35.71%)	37	1449740:1449799	1460580:1461249
WP_001105987.1|1442188_1442863_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.6	6.8e-128
WP_001096887.1|1443095_1443890_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_001105960.1|1445290_1445965_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	1.7e-126
WP_000505741.1|1445994_1446198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000369394.1|1446211_1446949_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000793446.1|1446941_1447871_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	42.2	1.0e-41
WP_000866106.1|1448864_1449539_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001105960.1|1449678_1450353_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	1.7e-126
1449740:1449799	attL	CTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCC	NA	NA	NA	NA
WP_000438874.1|1450826_1452293_+	ABC-F type ribosomal protection protein Msr(A)	NA	A0A2I4R674	Erysipelothrix_phage	37.7	6.6e-67
WP_000196697.1|1452391_1453291_+	Mph(C) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_000164956.1|1453801_1454617_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000790715.1|1454609_1456052_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000690638.1|1456023_1456617_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.1	1.5e-41
WP_001284653.1|1456880_1457261_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_000733274.1|1459113_1459959_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	33.6	2.2e-30
WP_011251344.1|1460025_1460670_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	95.3	9.8e-116
WP_000077571.1|1460816_1462631_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
1460580:1461249	attR	GGCAAAGAATACTTTAAAAGGTATTGAATGTATTTACGCTCTATATAAAAAGAACCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATTAAAATTATATTATAAATTCAACTTTGCAACAGAACCTTCTATCTACTATTAGAAAAATCATTGTTCCTTGCGACATGGAAATCGTAACATTATCGTTTAGGAGACAAAATTATGTATAATGAATGTATTATACCAAAGGAGTGATTATATGTCTCAAGGTTTACCTTTAAGAGAAGATGTTCCTGTTTCAGAAACATGGGATTTAGTAGACTTATTTAAAGATGATCAACAATATTATGAAAGTATTGACGCTCTAGTACAACAAGCAAATCAATTTCATCATACATATGCAACAACATTAAATTCAATCGAACAAATTAATACTGCTTTAGCTGAATTAGAAAATATTTTAATTGCCTTAGATCGCTTAAGTAATTATGCAGAACTACGTTTAAGTGTAGATACTAGTAATATCGAGGCACAAGTATTGAGCGCTAAATTATCTACTACATACGGTAAAATTGTTAGCCAATTATCATTTGTAGAGTCAGAAATACTTGAATTACCAGAAGAAATACTTCAACAATTAGAAGAATCATGTCCATATCAACACTATATTAAACAGTTAATAAAACAAAAGC	NA	NA	NA	NA
WP_000974847.1|1462770_1463412_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000079447.1|1463418_1464270_-	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000450297.1|1464316_1465234_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_000204625.1|1465235_1466162_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_000759227.1|1466352_1467336_-	phosphate ABC transporter substrate-binding protein PstS	NA	NA	NA	NA	NA
WP_031941832.1|1468307_1469210_-	RNA-binding virulence regulatory protein CvfB	NA	NA	NA	NA	NA
WP_000942303.1|1469356_1470958_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
WP_017328488.1|1471817_1473023_+	aspartate kinase	NA	NA	NA	NA	NA
WP_000163523.1|1473086_1474076_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000149256.1|1474077_1474965_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_000698229.1|1474961_1475684_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_000249839.1|1475710_1476430_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_001003795.1|1476572_1477724_+	amidohydrolase	NA	NA	NA	NA	NA
WP_000127602.1|1477728_1478814_+	alanine racemase	NA	NA	NA	NA	NA
WP_000216946.1|1478803_1480069_+	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
WP_000876201.1|1480308_1480710_-	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000809131.1|1480906_1481107_-	cold shock protein CspA	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000269923.1|1481277_1481586_-	DUF1033 family protein	NA	NA	NA	NA	NA
WP_001215907.1|1481748_1482018_+	acylphosphatase	NA	NA	NA	NA	NA
WP_001788788.1|1482036_1482666_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
>prophage 9
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1564181	1648224	2860508	holin,tRNA,integrase,portal,tail,head,terminase,protease,capsid	Staphylococcus_phage(83.13%)	109	1589992:1590007	1652380:1652395
WP_000858792.1|1564181_1565474_-|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.1	1.9e-54
WP_000525081.1|1565795_1568489_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000049916.1|1568512_1569484_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361552.1|1569470_1570673_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	1.9e-35
WP_000690027.1|1570677_1571820_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1572061_1572379_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1572715_1573396_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000154678.1|1573467_1574055_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000005212.1|1574044_1574620_-	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_000389533.1|1574633_1575878_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_000245902.1|1575884_1577183_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776308.1|1577192_1578257_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269921.1|1578282_1579449_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000789522.1|1579835_1580036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|1580244_1580694_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001096469.1|1580785_1581745_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	7.5e-11
WP_000774684.1|1581746_1582472_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|1582474_1583047_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|1583477_1583750_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161743.1|1583920_1584919_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1584935_1586246_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133954.1|1586467_1587643_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000644391.1|1588340_1589000_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681749.1|1589076_1590045_+	asparaginase	NA	NA	NA	NA	NA
1589992:1590007	attL	GCGTTAAGCAACAATT	NA	NA	NA	NA
WP_001174260.1|1590159_1591146_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_031867547.1|1591306_1591423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069296.1|1591547_1593008_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902108.1|1593160_1594540_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	4.9e-56
WP_001163809.1|1594529_1595483_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001151997.1|1595590_1595839_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186912.1|1595944_1596490_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000476340.1|1596899_1597814_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476881.1|1597870_1598788_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001837492.1|1598845_1599751_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000470336.1|1599841_1600027_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	1.7e-25
WP_024937002.1|1600275_1601259_-	Panton-Valentine bi-component leukocidin subunit F	NA	A0A2I6PEU3	Staphylococcus_phage	100.0	4.0e-185
WP_000239544.1|1601254_1602193_-	Panton-Valentine bi-component leukocidin subunit S	NA	A0A2I6PF61	Staphylococcus_phage	100.0	1.7e-180
WP_000909197.1|1602582_1604037_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A068A229	Staphylococcus_phage	100.0	1.5e-289
WP_000992284.1|1604047_1604350_-|holin	phage holin	holin	A0A068A215	Staphylococcus_phage	100.0	5.3e-48
WP_031867548.1|1604400_1604508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073391028.1|1604516_1604738_-|holin	putative holin-like toxin	holin	A0A068A202	Staphylococcus_phage	100.0	1.9e-23
WP_000750407.1|1604846_1605620_-	staphylococcal enterotoxin type A	NA	A0A068A244	Staphylococcus_phage	100.0	1.7e-146
WP_000340977.1|1606040_1606415_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262620.1|1606470_1606758_-	hypothetical protein	NA	C5I682	Staphylococcus_phage	100.0	9.9e-44
WP_001000058.1|1606803_1606956_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_000582187.1|1606948_1610731_-	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	100.0	0.0e+00
WP_000567390.1|1610746_1612231_-|tail	phage tail family protein	tail	A0A068A242	Staphylococcus_phage	100.0	1.5e-297
WP_000504562.1|1612227_1616772_-|tail	phage tail tape measure protein	tail	A0A068A2C9	Staphylococcus_phage	100.0	0.0e+00
WP_001837493.1|1616828_1616966_-	hypothetical protein	NA	A0A068A227	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|1617016_1617367_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|1617416_1617641_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268740.1|1617682_1618327_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|1618327_1618735_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|1618731_1619136_-	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|1619132_1619495_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|1619478_1619763_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|1619752_1620037_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|1620056_1621202_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642726.1|1621225_1621963_-|protease	Clp protease ClpP	protease	A0A068A225	Staphylococcus_phage	100.0	1.8e-129
WP_000025277.1|1621946_1623134_-|portal	phage portal protein	portal	A0A068A211	Staphylococcus_phage	100.0	3.9e-219
WP_000625088.1|1623149_1624811_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|1624807_1625152_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|1625281_1625581_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|1625812_1626229_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265042.1|1626256_1626457_-	DUF1514 family protein	NA	A0A2I6PDJ9	Staphylococcus_phage	100.0	1.4e-28
WP_000595265.1|1626456_1626606_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000592207.1|1626602_1626989_-	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000195803.1|1626985_1627192_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_001282074.1|1627188_1627434_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_000185660.1|1627470_1628013_-	dUTP pyrophosphatase	NA	A0A068A209	Staphylococcus_phage	100.0	1.1e-96
WP_000028422.1|1628005_1628188_-	hypothetical protein	NA	A0EWY1	Staphylococcus_phage	100.0	2.6e-26
WP_001837494.1|1628177_1628429_-	DUF1024 family protein	NA	A0A068A237	Staphylococcus_phage	100.0	1.4e-38
WP_001105620.1|1628421_1628706_-	hypothetical protein	NA	A0A2I6PDI3	Staphylococcus_phage	100.0	9.4e-47
WP_000982708.1|1628702_1629152_-	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
WP_000131386.1|1629216_1629459_-	hypothetical protein	NA	A0A068A208	Staphylococcus_phage	100.0	3.0e-41
WP_000029376.1|1629462_1629819_-	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_001187245.1|1629819_1630005_-	DUF3113 family protein	NA	A0A068A236	Staphylococcus_phage	100.0	2.4e-27
WP_000049795.1|1630009_1630414_-	DUF1064 domain-containing protein	NA	A0A068A2B2	Staphylococcus_phage	100.0	9.6e-69
WP_001123695.1|1630423_1630645_-	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000256597.1|1630658_1630817_-	hypothetical protein	NA	Q4ZBL5	Staphylococcus_phage	100.0	3.4e-22
WP_000803063.1|1630810_1631590_-	ATP-binding protein	NA	A0A068A1Z4	Staphylococcus_phage	100.0	2.9e-146
WP_000190254.1|1631599_1632370_-	conserved phage C-terminal domain-containing protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000414755.1|1632435_1632717_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001081076.1|1632709_1632859_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_001199422.1|1632855_1633527_-	hypothetical protein	NA	A0A068A206	Staphylococcus_phage	100.0	4.4e-127
WP_000704705.1|1633539_1634091_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_000134097.1|1634119_1634908_-	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	100.0	2.6e-142
WP_000815403.1|1634900_1635122_-	DUF2483 family protein	NA	A0A1X9H047	Staphylococcus_phage	100.0	1.2e-33
WP_000291066.1|1635131_1635392_-	DUF1108 family protein	NA	A0A068A219	Staphylococcus_phage	100.0	8.9e-44
WP_000219665.1|1635483_1635804_-	hypothetical protein	NA	A0A068A205	Staphylococcus_phage	100.0	1.6e-55
WP_001285950.1|1635804_1635972_-	DUF1270 domain-containing protein	NA	A0A068A1Z2	Staphylococcus_phage	100.0	4.7e-22
WP_001124198.1|1635983_1636247_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001038398.1|1636276_1636495_-	hypothetical protein	NA	A0A068A2A3	Staphylococcus_phage	100.0	8.6e-32
WP_001025595.1|1636491_1636818_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	100.0	5.4e-54
WP_001662405.1|1636894_1637032_-	hypothetical protein	NA	A0ZS11	Staphylococcus_virus	97.8	3.7e-17
WP_000435343.1|1637051_1637312_-	hypothetical protein	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
WP_001148574.1|1637324_1638122_-	phage antirepressor Ant	NA	A0A068A1Z1	Staphylococcus_phage	100.0	1.7e-146
WP_000639925.1|1638137_1638380_-	DUF739 family protein	NA	A0A2I6PDH8	Staphylococcus_phage	100.0	2.8e-39
WP_001083970.1|1638543_1639260_+	helix-turn-helix domain-containing protein	NA	A0A068A299	Staphylococcus_phage	100.0	5.4e-131
WP_000037409.1|1639277_1639721_+	hypothetical protein	NA	A0A068A217	Staphylococcus_phage	100.0	1.1e-49
WP_000345951.1|1639751_1639907_+	hypothetical protein	NA	A0A068A203	Staphylococcus_phage	100.0	2.8e-21
WP_001089803.1|1639893_1640079_+	hypothetical protein	NA	A0A068A1Z0	Staphylococcus_phage	100.0	3.0e-25
WP_000477304.1|1640136_1640340_-	hypothetical protein	NA	A0A068A231	Staphylococcus_phage	100.0	2.2e-29
WP_000683724.1|1640367_1641249_+	hypothetical protein	NA	A0A068A296	Staphylococcus_phage	100.0	2.1e-140
WP_000264740.1|1641326_1642532_+|integrase	site-specific integrase	integrase	A0A068A216	Staphylococcus_phage	100.0	5.9e-223
WP_001829176.1|1642574_1644602_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	92.5	1.6e-108
WP_001793476.1|1644613_1645522_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987769.1|1645766_1647518_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
WP_000064078.1|1647498_1648224_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
1652380:1652395	attR	AATTGTTGCTTAACGC	NA	NA	NA	NA
>prophage 10
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1704849	1713161	2860508	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213907.1|1704849_1705635_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.7e-19
WP_000924214.1|1705760_1706651_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062177.1|1706660_1708007_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683933.1|1708120_1709221_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624568.1|1709223_1709901_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1710031_1711138_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217262.1|1711361_1713161_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	1.0e-53
>prophage 11
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1782845	1791888	2860508	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1782845_1783364_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|1783385_1785659_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749794.1|1785861_1788141_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	4.8e-32
WP_001160682.1|1788415_1788676_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1788694_1789834_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1789856_1790882_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1790883_1791888_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 12
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1921714	1934449	2860508	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_001050540.1|1921714_1928275_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	97.1	9.2e-302
WP_000836465.1|1928600_1928912_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001789004.1|1928933_1931357_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.7	0.0e+00
WP_001025061.1|1931644_1932826_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526544.1|1932935_1933889_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	1.1e-78
WP_000764423.1|1933885_1934449_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	100.0	2.2e-103
>prophage 13
NZ_CP010526	Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 chromosome, complete genome	2860508	1937608	1970529	2860508	protease,transposase	Staphylococcus_phage(90.32%)	36	NA	NA
WP_001196354.1|1937608_1938610_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1938731_1939196_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159035.1|1939208_1940390_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
WP_000493888.1|1940400_1941033_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	100.0	3.4e-113
WP_001829168.1|1941039_1942083_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.5e-195
WP_001261670.1|1942563_1944066_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221178.1|1944588_1944903_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	99.0	5.7e-53
WP_000989125.1|1944902_1946195_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	98.6	6.1e-226
WP_000163235.1|1946212_1946608_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001837615.1|1946983_1948303_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_001032833.1|1948422_1949277_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1949552_1949777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671044.1|1949975_1950446_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	97.4	3.3e-81
WP_001153742.1|1950558_1951002_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1950988_1951432_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168910.1|1951727_1952363_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1952801_1953515_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1953774_1954077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200544.1|1954332_1954698_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	1.1e-58
WP_000623471.1|1954694_1955048_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453311.1|1955430_1956264_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	2.7e-158
WP_000366163.1|1956475_1957384_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933828.1|1957508_1958702_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	7.4e-218
WP_000109897.1|1959073_1960666_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_002868962.1|1960918_1961665_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|1961669_1962143_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1962208_1962466_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778508.1|1962462_1963464_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	96.7	3.4e-184
WP_000348353.1|1963468_1964947_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	5.3e-282
WP_072460539.1|1965105_1965561_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	1.0e-79
WP_001829077.1|1965863_1966514_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	98.1	8.8e-56
WP_000070645.1|1966594_1967590_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669025.1|1967664_1968291_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	91.2	1.1e-71
WP_174840254.1|1968317_1969061_+	exotoxin	NA	A0EX09	Staphylococcus_phage	33.5	1.1e-25
WP_000764922.1|1969087_1969840_+	hypothetical protein	NA	A0A097PAT7	Streptococcus_pyogenes_phage	47.2	4.4e-51
WP_000864141.1|1969971_1970529_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	96.8	4.1e-78
